BR112018014086A2 - ?infraestrutura genômica para processamento e análise de dna ou rna no local ou baseados em nuvem, plataforma de análise genômica e sistema? - Google Patents

?infraestrutura genômica para processamento e análise de dna ou rna no local ou baseados em nuvem, plataforma de análise genômica e sistema?

Info

Publication number
BR112018014086A2
BR112018014086A2 BR112018014086A BR112018014086A BR112018014086A2 BR 112018014086 A2 BR112018014086 A2 BR 112018014086A2 BR 112018014086 A BR112018014086 A BR 112018014086A BR 112018014086 A BR112018014086 A BR 112018014086A BR 112018014086 A2 BR112018014086 A2 BR 112018014086A2
Authority
BR
Brazil
Prior art keywords
genomic
analysis
logic circuits
digital logic
premises
Prior art date
Application number
BR112018014086A
Other languages
English (en)
Inventor
Ruehle Michael
Van Rooyen Pieter
Mehio Rami
J Mcmillen Robert
Original Assignee
Edico Genome Corp
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Edico Genome Corp filed Critical Edico Genome Corp
Publication of BR112018014086A2 publication Critical patent/BR112018014086A2/pt

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Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/10—Ontologies; Annotations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/30—Data warehousing; Computing architectures
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/50—Compression of genetic data
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A90/00—Technologies having an indirect contribution to adaptation to climate change
    • Y02A90/10—Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Biophysics (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Chemical & Material Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Tests Of Electronic Circuits (AREA)
  • Peptides Or Proteins (AREA)
  • Investigating Or Analysing Biological Materials (AREA)

Abstract

trata-se de um sistema, um método e um aparelho para executar uma tubulação de análise de sequência em dados de sequência genética que incluem um circuito integrado formado de um conjunto de circuitos lógicos digitais conectados por fio que são interconectados por interconexões elétricas físicas. uma das interconexões elétricas físicas forma uma entrada para o circuito integrado conectado com uma fonte de dados eletrônica para receber leituras de dados genômicos. os circuitos lógicos digitais conectados por fio são dispostos como um conjunto de mecanismos de processamento, em que cada mecanismo de processamento é formado de um subconjunto dos circuitos lógicos digitais conectados por fio para realizar uma ou mais etapas na tubulação de análise de sequência nas leituras de dados genômicos. cada subconjunto dos circuitos lógicos digitais conectados por fio é formado em uma configuração com fio para realizar a uma ou mais etapas na tubulação de análise de sequência.
BR112018014086A 2016-01-11 2017-01-11 ?infraestrutura genômica para processamento e análise de dna ou rna no local ou baseados em nuvem, plataforma de análise genômica e sistema? BR112018014086A2 (pt)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201662277445P 2016-01-11 2016-01-11
PCT/US2017/013057 WO2017123664A1 (en) 2016-01-11 2017-01-11 Genomic infrastructure for on-site or cloud-based dna and rna processing and analysis

Publications (1)

Publication Number Publication Date
BR112018014086A2 true BR112018014086A2 (pt) 2018-12-11

Family

ID=57915106

Family Applications (1)

Application Number Title Priority Date Filing Date
BR112018014086A BR112018014086A2 (pt) 2016-01-11 2017-01-11 ?infraestrutura genômica para processamento e análise de dna ou rna no local ou baseados em nuvem, plataforma de análise genômica e sistema?

Country Status (15)

Country Link
EP (2) EP3937178A1 (pt)
JP (3) JP7308616B2 (pt)
KR (1) KR20180107148A (pt)
CN (2) CN108604260B (pt)
AU (2) AU2017207317A1 (pt)
BR (1) BR112018014086A2 (pt)
CA (1) CA3008176A1 (pt)
HK (1) HK1259309A1 (pt)
IL (3) IL283416B2 (pt)
MX (1) MX2018008527A (pt)
MY (1) MY193874A (pt)
RU (1) RU2761066C2 (pt)
SG (1) SG11201805562QA (pt)
WO (1) WO2017123664A1 (pt)
ZA (2) ZA202210297B (pt)

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CN110057882B (zh) * 2018-01-19 2020-07-28 中国科学院大连化学物理研究所 一种基于二维钛碳化合物的电化学生物传感器及其应用
CN109448788B (zh) * 2018-10-24 2022-03-15 广州基迪奥生物科技有限公司 基因组学及生物信息学的微生物组学在线分析平台架构
KR20200058246A (ko) 2018-11-19 2020-05-27 서울여자대학교 산학협력단 군집 분석 데이터에 대한 어셈블리 데이터 생성 방법 및 그 장치
CN111835507B (zh) * 2019-04-19 2023-04-25 富联国基(上海)电子有限公司 基于基因芯片的非对称加密解密方法
CN112309501A (zh) * 2019-08-02 2021-02-02 华为技术有限公司 基因比对技术
CN110648723A (zh) * 2019-09-29 2020-01-03 江苏医健大数据保护与开发有限公司 一种基于云架构平台的基因数据分析方法
CN111049799B (zh) 2019-11-13 2022-01-21 华为终端有限公司 控制方法、装置和***
CN112825268B (zh) * 2019-11-21 2024-05-14 深圳华大基因科技服务有限公司 测序结果比对方法及其应用
EP4077711A4 (en) * 2019-12-16 2024-01-03 Ohio State Innovation Foundation NEXT GENERATION SEQUENCING DIAGNOSTIC PLATFORM AND ASSOCIATED METHODS
CN110968730B (zh) * 2019-12-16 2023-06-09 Oppo（重庆）智能科技有限公司 音频标记处理方法、装置、计算机设备及存储介质
CN111309387B (zh) * 2020-01-22 2023-04-18 阿里巴巴集团控股有限公司 一种驱动加载的方法及装置、电子设备、存储介质
CN111445952B (zh) * 2020-03-25 2024-01-26 山东大学 超长基因序列的相似性快速比对方法及***
CN111460747B (zh) * 2020-04-10 2023-03-31 重庆百瑞互联电子技术有限公司 一种用于集成电路设计的标准单元追踪方法
CN115698330A (zh) * 2020-05-28 2023-02-03 豪夫迈·罗氏有限公司 识别高错误单分子读段中的短基序的序列比对***和方法
US11198121B1 (en) 2020-06-10 2021-12-14 Element Biosciences, Inc. Flow cell systems and devices
JP7393439B2 (ja) * 2020-10-22 2023-12-06 ビージーアイ ジェノミクス カンパニー リミテッド 遺伝子シークエンシングデータ処理方法及び遺伝子シークエンシングデータ処理装置
CN112507649B (zh) * 2020-12-23 2024-04-02 珠海一微半导体股份有限公司 一种模拟版图的数模引脚映射到数字版图的方法
CN112634988B (zh) * 2021-01-07 2021-10-08 内江师范学院 基于Python语言的基因变异检测方法及***
CN113160906B (zh) * 2021-04-21 2024-01-02 南京信息工程大学 一种MXenes材料稳定性分类***及其运行方法
US20230051863A1 (en) * 2021-08-10 2023-02-16 Micron Technology, Inc. Memory device for wafer-on-wafer formed memory and logic
CN115881225B (zh) * 2022-12-28 2024-01-26 云舟生物科技(广州)股份有限公司 生物信息序列的分析方法、计算机存储介质及电子设备
CN117373696B (zh) * 2023-12-08 2024-03-01 神州医疗科技股份有限公司 一种基于文献证据库的遗传病自动解读***及方法

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EP2759953B1 (en) * 2013-01-28 2022-03-02 Hasso-Plattner-Institut für Softwaresystemtechnik GmbH System and method for genomic data processing with an in-memory database system and real-time analysis
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Also Published As

Publication number Publication date
EP3403208A1 (en) 2018-11-21
HK1259309A1 (zh) 2019-11-29
JP7308616B2 (ja) 2023-07-14
JP2024023350A (ja) 2024-02-21
RU2018120941A3 (pt) 2020-08-31
CN108604260B (zh) 2022-06-10
IL260118A (en) 2018-07-31
IL283416A (en) 2021-06-30
IL283416B1 (en) 2023-06-01
MX2018008527A (es) 2019-05-15
IL260118B (en) 2021-06-30
WO2017123664A1 (en) 2017-07-20
AU2022228089A1 (en) 2022-09-29
EP3403208B1 (en) 2021-06-16
CA3008176A1 (en) 2017-07-20
RU2761066C2 (ru) 2021-12-02
RU2018120941A (ru) 2020-02-13
JP2019510323A (ja) 2019-04-11
KR20180107148A (ko) 2018-10-01
ZA202308916B (en) 2024-05-30
CN108604260A (zh) 2018-09-28
IL283416B2 (en) 2023-10-01
SG11201805562QA (en) 2018-07-30
MY193874A (en) 2022-10-30
IL302704A (en) 2023-07-01
JP2022130389A (ja) 2022-09-06
RU2021134292A (ru) 2022-04-01
ZA202210297B (en) 2023-07-26
AU2017207317A1 (en) 2018-06-28
EP3937178A1 (en) 2022-01-12
CN114974426A (zh) 2022-08-30

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Legal Events

Date Code Title Description
B350 Update of information on the portal [chapter 15.35 patent gazette]
B06W Patent application suspended after preliminary examination (for patents with searches from other patent authorities) chapter 6.23 patent gazette]
B154 Notification of filing of divisional application [chapter 15.50 patent gazette]

Free format text: O PEDIDO FOI DIVIDIDO NO BR122023000599-6 PROTOCOLO 870230003337 EM 12/01/2023 14:41.

B07A Application suspended after technical examination (opinion) [chapter 7.1 patent gazette]
B15K Others concerning applications: alteration of classification

Free format text: AS CLASSIFICACOES ANTERIORES ERAM: G06F 19/28 , G06F 19/22

Ipc: G16B 50/10 (2019.01), G16B 50/30 (2019.01), G16B 5