ATE424455T1 - Ligationsvermittelnde codierung von kleinen molekülen - Google Patents
Ligationsvermittelnde codierung von kleinen molekülenInfo
- Publication number
- ATE424455T1 ATE424455T1 AT04722237T AT04722237T ATE424455T1 AT E424455 T1 ATE424455 T1 AT E424455T1 AT 04722237 T AT04722237 T AT 04722237T AT 04722237 T AT04722237 T AT 04722237T AT E424455 T1 ATE424455 T1 AT E424455T1
- Authority
- AT
- Austria
- Prior art keywords
- chemical entities
- template
- encoded molecule
- codon
- identifier polynucleotide
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
- C07H21/04—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids with deoxyribosyl as saccharide radical
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1068—Template (nucleic acid) mediated chemical library synthesis, e.g. chemical and enzymatical DNA-templated organic molecule synthesis, libraries prepared by non ribosomal polypeptide synthesis [NRPS], DNA/RNA-polymerase mediated polypeptide synthesis
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P21/00—Preparation of peptides or proteins
- C12P21/02—Preparation of peptides or proteins having a known sequence of two or more amino acids, e.g. glutathione
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B40/00—Libraries per se, e.g. arrays, mixtures
- C40B40/04—Libraries containing only organic compounds
- C40B40/06—Libraries containing nucleotides or polynucleotides, or derivatives thereof
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B50/00—Methods of creating libraries, e.g. combinatorial synthesis
- C40B50/04—Methods of creating libraries, e.g. combinatorial synthesis using dynamic combinatorial chemistry techniques
Landscapes
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Molecular Biology (AREA)
- Biochemistry (AREA)
- Engineering & Computer Science (AREA)
- Genetics & Genomics (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Biotechnology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- General Chemical & Material Sciences (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Medicinal Chemistry (AREA)
- Biomedical Technology (AREA)
- Microbiology (AREA)
- Biophysics (AREA)
- Plant Pathology (AREA)
- Physics & Mathematics (AREA)
- Crystallography & Structural Chemistry (AREA)
- Bioinformatics & Computational Biology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Medicines Containing Material From Animals Or Micro-Organisms (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
- Heterocyclic Carbon Compounds Containing A Hetero Ring Having Oxygen Or Sulfur (AREA)
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US45585803P | 2003-03-20 | 2003-03-20 | |
DKPA200300430 | 2003-03-20 |
Publications (1)
Publication Number | Publication Date |
---|---|
ATE424455T1 true ATE424455T1 (de) | 2009-03-15 |
Family
ID=33031172
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
AT04722237T ATE424455T1 (de) | 2003-03-20 | 2004-03-22 | Ligationsvermittelnde codierung von kleinen molekülen |
Country Status (6)
Country | Link |
---|---|
US (1) | US7915201B2 (de) |
EP (2) | EP1608748B1 (de) |
AT (1) | ATE424455T1 (de) |
DE (1) | DE602004019764D1 (de) |
DK (2) | DK2236606T3 (de) |
WO (1) | WO2004083427A2 (de) |
Families Citing this family (36)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP1401850A1 (de) | 2001-06-20 | 2004-03-31 | Nuevolution A/S | Nukleosidderivate zur herstellung einer verbindungsbibliothek |
CN101006177B (zh) * | 2002-03-15 | 2011-10-12 | 纽韦卢森公司 | 改善的用于合成模制分子的方法 |
US10730906B2 (en) * | 2002-08-01 | 2020-08-04 | Nuevolutions A/S | Multi-step synthesis of templated molecules |
JP4657919B2 (ja) * | 2002-08-19 | 2011-03-23 | プレジデント アンド フェローズ オブ ハーバード カレッジ | 進化する新しい分子機能 |
WO2004028682A2 (en) | 2002-09-27 | 2004-04-08 | Carlsberg A/S | Spatially encoded polymer matrix |
ES2640279T3 (es) | 2002-10-30 | 2017-11-02 | Nuevolution A/S | Procedimiento para la síntesis de un complejo bifuncional |
US9121110B2 (en) | 2002-12-19 | 2015-09-01 | Nuevolution A/S | Quasirandom structure and function guided synthesis methods |
WO2004074429A2 (en) | 2003-02-21 | 2004-09-02 | Nuevolution A/S | Method for producing second-generation library |
DK2236606T3 (da) | 2003-03-20 | 2014-02-10 | Nuevolution As | Kodning af små molekyler ved ligering |
US8017323B2 (en) * | 2003-03-26 | 2011-09-13 | President And Fellows Of Harvard College | Free reactant use in nucleic acid-templated synthesis |
DE602004023960D1 (de) | 2003-09-18 | 2009-12-17 | Nuevolution As | Methode zur Gewinnung struktureller Informationen kodierter Moleküle und zur Selektion von Verbindungen |
US7972994B2 (en) | 2003-12-17 | 2011-07-05 | Glaxosmithkline Llc | Methods for synthesis of encoded libraries |
MXPA06006863A (es) * | 2003-12-17 | 2006-09-04 | Praecis Pharm Inc | Metodo para la sintesis de bibliotecas codificadas. |
US20090239211A1 (en) * | 2004-02-17 | 2009-09-24 | Nuevolution A/S | Method For Enrichment Involving Elimination By Mismatch Hybridisation |
DK1730277T3 (da) * | 2004-03-22 | 2010-03-01 | Nuevolution As | Kodning ved ligering under anvendelse af byggebloksoligonukleotider |
DE602005012319D1 (de) * | 2004-11-22 | 2009-02-26 | Peter Birk Rasmussen | Matrizengerichtete split-and-mix-synthese von bibliotheken kleiner moleküle |
ES2365534T3 (es) * | 2005-06-09 | 2011-10-06 | Praecis Pharmaceuticals Inc. | Procedimientos para la síntesis de bibliotecas codificadas. |
US7883848B2 (en) * | 2005-07-08 | 2011-02-08 | Olink Ab | Regulation analysis by cis reactivity, RACR |
WO2007053358A2 (en) * | 2005-10-28 | 2007-05-10 | Praecis Pharmaceuticals, Inc. | Methods for identifying compounds of interest using encoded libraries |
SI2341140T1 (sl) * | 2005-12-01 | 2017-12-29 | Nuevolution A/S | Postopki encimskega kodiranja za učinkovito sintezo velikih knjižnic |
US7727745B2 (en) | 2006-08-14 | 2010-06-01 | Bio-Id Diagnostic Inc. | Synthesis of single-stranded DNA |
WO2009077173A2 (en) * | 2007-12-19 | 2009-06-25 | Philochem Ag | Dna-encoded chemical libraries |
WO2009097673A1 (en) * | 2008-02-07 | 2009-08-13 | Bio-Id Diagnostic Inc. | Synthesis of single-stranded dna |
KR20170119729A (ko) * | 2009-02-13 | 2017-10-27 | 엑스-켐, 인크. | Dna―코딩된 라이브러리의 생성 및 스크리닝 방법 |
LT2558577T (lt) | 2010-04-16 | 2019-03-12 | Nuevolution A/S | Bifunkciniai kompleksai ir tokių kompleksų gamybos ir naudojimo būdai |
EP2405000A1 (de) * | 2010-07-06 | 2012-01-11 | Alacris Theranostics GmbH | Synthese chemischer Bibliotheken |
US10865409B2 (en) | 2011-09-07 | 2020-12-15 | X-Chem, Inc. | Methods for tagging DNA-encoded libraries |
AU2013289993B2 (en) | 2012-07-13 | 2018-05-10 | X-Chem, Inc. | DNA-encoded libraries having encoding oligonucleotide linkages not readable by polymerases |
US9765375B2 (en) | 2013-06-28 | 2017-09-19 | General Electric Company | Methods for developing binding-elements and uses thereof |
GB201322692D0 (en) | 2013-12-20 | 2014-02-05 | Philochem Ag | Production of encoded chemical libraries |
GB201603789D0 (en) | 2016-03-04 | 2016-04-20 | Apta Biosciences Ltd | Oligonucleotides and methods for preparing |
CN115820806A (zh) | 2016-06-16 | 2023-03-21 | 哈斯达克科学公司 | 寡核苷酸指导和记录的编码探针分子的组合合成 |
EP3619340A4 (de) | 2017-05-02 | 2021-01-20 | Haystack Sciences Corporation | Moleküle zur verifizierung von oligonukleotidgerichteter kombinatorischer synthese und verfahren zur herstellung und verwendung davon |
CN107802276B (zh) * | 2017-09-01 | 2020-11-27 | 深圳市菲森科技有限公司 | 头颅影像的描迹图绘制装置和方法 |
KR20220097404A (ko) | 2019-10-10 | 2022-07-07 | 1859, 인크. | 미세유체 스크리닝을 위한 방법 및 시스템 |
EP4065723A4 (de) * | 2019-11-29 | 2024-01-17 | MGI Holdings Co., Limited | Enzymatische synthese von oligonukleotiden |
Family Cites Families (65)
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US4822731A (en) | 1986-01-09 | 1989-04-18 | Cetus Corporation | Process for labeling single-stranded nucleic acids and hybridizaiton probes |
US5449602A (en) | 1988-01-13 | 1995-09-12 | Amoco Corporation | Template-directed photoligation |
AU649217B2 (en) | 1988-11-18 | 1994-05-19 | Regents Of The University Of California, The | Method for site-specifically incorporating unnatural amino acids into proteins |
ES2118066T3 (es) | 1989-10-05 | 1998-09-16 | Optein Inc | Sintesis y aislamiento, exentos de celulas, de nuevos genes y polipeptidos. |
US5723289A (en) | 1990-06-11 | 1998-03-03 | Nexstar Pharmaceuticals, Inc. | Parallel selex |
AU2313392A (en) | 1991-08-01 | 1993-03-02 | University Research Corporation | Systematic polypeptide evolution by reverse translation |
AU669489B2 (en) | 1991-09-18 | 1996-06-13 | Affymax Technologies N.V. | Method of synthesizing diverse collections of oligomers |
US5639603A (en) | 1991-09-18 | 1997-06-17 | Affymax Technologies N.V. | Synthesizing and screening molecular diversity |
US5573905A (en) | 1992-03-30 | 1996-11-12 | The Scripps Research Institute | Encoded combinatorial chemical libraries |
US5681943A (en) | 1993-04-12 | 1997-10-28 | Northwestern University | Method for covalently linking adjacent oligonucleotides |
ES2204913T3 (es) | 1993-04-12 | 2004-05-01 | Northwestern University | Metodo para formacion de oligonucleotidos. |
US5840485A (en) | 1993-05-27 | 1998-11-24 | Selectide Corporation | Topologically segregated, encoded solid phase libraries |
US5473060A (en) | 1993-07-02 | 1995-12-05 | Lynx Therapeutics, Inc. | Oligonucleotide clamps having diagnostic applications |
US5571903A (en) | 1993-07-09 | 1996-11-05 | Lynx Therapeutics, Inc. | Auto-ligating oligonucleotide compounds |
GB9315847D0 (en) * | 1993-07-30 | 1993-09-15 | Isis Innovation | Tag reagent and assay method |
US5503805A (en) | 1993-11-02 | 1996-04-02 | Affymax Technologies N.V. | Apparatus and method for parallel coupling reactions |
AU703472B2 (en) | 1993-11-02 | 1999-03-25 | Affymax Technologies N.V. | Synthesizing and screening molecular diversity |
US6165778A (en) | 1993-11-02 | 2000-12-26 | Affymax Technologies N.V. | Reaction vessel agitation apparatus |
US5605793A (en) | 1994-02-17 | 1997-02-25 | Affymax Technologies N.V. | Methods for in vitro recombination |
US5739386A (en) | 1994-06-23 | 1998-04-14 | Affymax Technologies N.V. | Photolabile compounds and methods for their use |
US5604097A (en) | 1994-10-13 | 1997-02-18 | Spectragen, Inc. | Methods for sorting polynucleotides using oligonucleotide tags |
US5843650A (en) | 1995-05-01 | 1998-12-01 | Segev; David | Nucleic acid detection and amplification by chemical linkage of oligonucleotides |
US5830658A (en) | 1995-05-31 | 1998-11-03 | Lynx Therapeutics, Inc. | Convergent synthesis of branched and multiply connected macromolecular structures |
US5780613A (en) | 1995-08-01 | 1998-07-14 | Northwestern University | Covalent lock for self-assembled oligonucleotide constructs |
DE19646372C1 (de) * | 1995-11-11 | 1997-06-19 | Evotec Biosystems Gmbh | Genotyp und Phänotyp koppelnde Verbindung |
RU2233878C2 (ru) | 1997-01-21 | 2004-08-10 | Дзе Дженерал Хоспитал Корпорейшн | Способ отбора желательного белка и нуклеиновой кислоты, средства для его осуществления |
US6261804B1 (en) | 1997-01-21 | 2001-07-17 | The General Hospital Corporation | Selection of proteins using RNA-protein fusions |
US6620587B1 (en) | 1997-05-28 | 2003-09-16 | Discerna Limited | Ribosome complexes as selection particles for in vitro display and evolution of proteins |
US6969584B2 (en) | 1997-06-12 | 2005-11-29 | Rigel Pharmaceuticals, Inc. | Combinatorial enzymatic complexes |
US20030004122A1 (en) | 1997-11-05 | 2003-01-02 | Leonid Beigelman | Nucleotide triphosphates and their incorporation into oligonucleotides |
WO1999051773A1 (en) | 1998-04-03 | 1999-10-14 | Phylos, Inc. | Addressable protein arrays |
EP1073730A1 (de) | 1998-04-17 | 2001-02-07 | Whitehead For Biomedical Research | Verwendung von ribozym zum verbinden von nukleinsäuren mit polypeptiden |
WO2000021909A2 (en) | 1998-10-09 | 2000-04-20 | Pharmacopeia, Inc. | Selecting codes to be used for encoding combinatorial libraries |
EP1123305A1 (de) * | 1998-10-19 | 2001-08-16 | The Board Of Trustees Of The Leland Stanford Junior University | Chemie einer dna-templatisierten kombinatorischen bibliothek |
US6416950B1 (en) | 1998-12-02 | 2002-07-09 | Phylos, Inc. | DNA-protein fusions and uses thereof |
CA2403209A1 (en) | 1999-04-08 | 2000-10-19 | Pavel V. Sergeev | Synthesis of biologically active compounds in cells |
EP1198591B1 (de) | 1999-06-25 | 2011-03-16 | Nanosphere, Inc. | Nanopartikel mit gebundenen oligonukleotiden und deren verwendungen |
ES2383332T3 (es) | 1999-07-27 | 2012-06-20 | Bristol-Myers Squibb Company | Procedimiento de ligación de aceptores de péptidos |
US6593088B1 (en) | 1999-08-27 | 2003-07-15 | Japan Science And Technology Corporation | Reversible photocoupling nucleic acid and phosphoroamidite |
ATE335754T1 (de) * | 2001-03-19 | 2006-09-15 | Harvard College | Entwicklung neuer molekularer funktionen |
WO2004001042A2 (en) | 2002-06-20 | 2003-12-31 | Nuevolution A/S | Microarrays displaying encoded molecules |
EP1401850A1 (de) | 2001-06-20 | 2004-03-31 | Nuevolution A/S | Nukleosidderivate zur herstellung einer verbindungsbibliothek |
WO2002103008A2 (en) * | 2001-06-20 | 2002-12-27 | Nuevolution A/S | Templated molecules and methods for using such molecules |
CN101006177B (zh) | 2002-03-15 | 2011-10-12 | 纽韦卢森公司 | 改善的用于合成模制分子的方法 |
EP1487851A2 (de) | 2002-03-15 | 2004-12-22 | Nuevolution A/S | Ein baustein geeignet zur funktionellen gruppe übertragung zum nucleophil |
WO2003078446A2 (en) | 2002-03-15 | 2003-09-25 | Nuevolution A/S | A building block forming a c-c or a c-hetero atom bond upon reaction |
AU2003214032A1 (en) | 2002-03-15 | 2003-09-29 | Nuevolution A/S | A building block forming a c=c double bond upon reaction |
AU2003253069A1 (en) | 2002-03-15 | 2003-09-29 | Nuevolution A/S | A building block forming a c-c bond upon reaction |
WO2003082901A2 (en) | 2002-03-22 | 2003-10-09 | Emory University | Template-driven processes for synthesizing polymers and components related to such processes |
EP1527173A1 (de) | 2002-07-23 | 2005-05-04 | Nuevolution A/S | Gendurchmischung durch wechselnder schablone |
US10730906B2 (en) * | 2002-08-01 | 2020-08-04 | Nuevolutions A/S | Multi-step synthesis of templated molecules |
JP4657919B2 (ja) | 2002-08-19 | 2011-03-23 | プレジデント アンド フェローズ オブ ハーバード カレッジ | 進化する新しい分子機能 |
WO2004024929A2 (en) | 2002-09-12 | 2004-03-25 | Nuevolution A/S | Proximity-aided synthesis of templated molecules |
ES2640279T3 (es) | 2002-10-30 | 2017-11-02 | Nuevolution A/S | Procedimiento para la síntesis de un complejo bifuncional |
US9121110B2 (en) | 2002-12-19 | 2015-09-01 | Nuevolution A/S | Quasirandom structure and function guided synthesis methods |
US20060269920A1 (en) | 2003-02-21 | 2006-11-30 | Nuevolution A/S | Method for obtaining structural information about an encoded molecule |
WO2004074429A2 (en) | 2003-02-21 | 2004-09-02 | Nuevolution A/S | Method for producing second-generation library |
DK2236606T3 (da) | 2003-03-20 | 2014-02-10 | Nuevolution As | Kodning af små molekyler ved ligering |
WO2004099441A2 (en) | 2003-05-09 | 2004-11-18 | Hyscite Discovery As | Selection and evolution of chemical libraries |
WO2004110964A2 (en) | 2003-06-16 | 2004-12-23 | Nuevolution A/S | Encoded molecules by translation (emt) |
WO2005003778A2 (en) | 2003-07-02 | 2005-01-13 | Nuevolution A/S | A method for identifying a synthetic molecule having affinity towards a target |
EP1533385A1 (de) | 2003-09-05 | 2005-05-25 | Nuevolution A/S | Matrizenabhängigen Verbindungen zur Herstellung von kodierten Molekülen und gesteuerten Verfahren unter Verwendung dieser Verbindungen |
DE602004023960D1 (de) | 2003-09-18 | 2009-12-17 | Nuevolution As | Methode zur Gewinnung struktureller Informationen kodierter Moleküle und zur Selektion von Verbindungen |
KR101411361B1 (ko) | 2004-11-08 | 2014-06-25 | 비퍼겐 에이피에스 | 구조적 핵산에 의해 가이드되는 화학적 합성 |
DE602005012319D1 (de) | 2004-11-22 | 2009-02-26 | Peter Birk Rasmussen | Matrizengerichtete split-and-mix-synthese von bibliotheken kleiner moleküle |
-
2004
- 2004-03-22 DK DK09154197.9T patent/DK2236606T3/da active
- 2004-03-22 AT AT04722237T patent/ATE424455T1/de not_active IP Right Cessation
- 2004-03-22 DE DE602004019764T patent/DE602004019764D1/de not_active Expired - Lifetime
- 2004-03-22 DK DK04722237T patent/DK1608748T3/da active
- 2004-03-22 US US10/549,619 patent/US7915201B2/en active Active
- 2004-03-22 EP EP04722237A patent/EP1608748B1/de not_active Expired - Lifetime
- 2004-03-22 EP EP09154197.9A patent/EP2236606B1/de not_active Expired - Lifetime
- 2004-03-22 WO PCT/DK2004/000195 patent/WO2004083427A2/en active Application Filing
Also Published As
Publication number | Publication date |
---|---|
WO2004083427A2 (en) | 2004-09-30 |
DK2236606T3 (da) | 2014-02-10 |
EP2236606B1 (de) | 2013-11-06 |
WO2004083427A3 (en) | 2005-02-17 |
EP2236606A3 (de) | 2010-10-20 |
DE602004019764D1 (de) | 2009-04-16 |
US7915201B2 (en) | 2011-03-29 |
EP1608748B1 (de) | 2009-03-04 |
US20060246450A1 (en) | 2006-11-02 |
EP1608748A2 (de) | 2005-12-28 |
DK1608748T3 (da) | 2009-06-29 |
EP2236606A2 (de) | 2010-10-06 |
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Legal Events
Date | Code | Title | Description |
---|---|---|---|
RER | Ceased as to paragraph 5 lit. 3 law introducing patent treaties |