SE9302152D0 - A method and apparatus for analysing polynucleotide sequences - Google Patents
A method and apparatus for analysing polynucleotide sequencesInfo
- Publication number
- SE9302152D0 SE9302152D0 SE19939302152A SE9302152A SE9302152D0 SE 9302152 D0 SE9302152 D0 SE 9302152D0 SE 19939302152 A SE19939302152 A SE 19939302152A SE 9302152 A SE9302152 A SE 9302152A SE 9302152 D0 SE9302152 D0 SE 9302152D0
- Authority
- SE
- Sweden
- Prior art keywords
- polynucleotide
- oligonucleotide primers
- base
- interest
- sets
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
- C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6858—Allele-specific amplification
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Organic Chemistry (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Biochemistry (AREA)
- Biotechnology (AREA)
- Molecular Biology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Immunology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Priority Applications (13)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
SE9302152A SE501439C2 (sv) | 1993-06-22 | 1993-06-22 | Sätt och anordning för analys av polynukleotidsekvenser |
PCT/US1994/007086 WO1995000669A1 (en) | 1993-06-22 | 1994-06-22 | Parallel primer extension approach to nucleic acid sequence analysis |
AU72121/94A AU698553B2 (en) | 1993-06-22 | 1994-06-22 | Parallel primer extension approach to nucleic acid sequence analysis |
JP50308095A JP3722833B2 (ja) | 1993-06-22 | 1994-06-22 | 核酸配列分析の平行プライマー拡張手法 |
EP99200676A EP0969103A3 (en) | 1993-06-22 | 1994-06-22 | Parallel primer extension approach to nucleic acid sequence analysis |
AT94921363T ATE185843T1 (de) | 1993-06-22 | 1994-06-22 | Nukleinsäure-sequenzanalyse durch die methode der parallelen primerextension |
EP94921363A EP0705349B1 (en) | 1993-06-22 | 1994-06-22 | Parallel primer extension approach to nucleic acid sequence analysis |
DE69421277T DE69421277T2 (de) | 1993-06-22 | 1994-06-22 | NUKLEINSäURE-SEQUENZANALYSE DURCH DIE METHODE DER PARALLELEN PRIMEREXTENSION |
ES94921363T ES2141828T3 (es) | 1993-06-22 | 1994-06-22 | Acceso a analisis de secuencias de acidos nucleicos por extension de cebadores en paralelo. |
US08/564,100 US6153379A (en) | 1993-06-22 | 1994-06-22 | Parallel primer extension approach to nucleic acid sequence analysis |
CA002164715A CA2164715A1 (en) | 1993-06-22 | 1994-06-22 | Parallel primer extension approach to nucleic acid sequence analysis |
US09/711,476 US7001722B1 (en) | 1993-06-22 | 2000-11-13 | Parallel primer extension approach to nucleic acid sequence analysis |
US10/254,828 US20030082613A1 (en) | 1993-06-22 | 2002-09-25 | Parallel primer extension approach to nucleic acid sequence analysis |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
SE9302152A SE501439C2 (sv) | 1993-06-22 | 1993-06-22 | Sätt och anordning för analys av polynukleotidsekvenser |
Publications (3)
Publication Number | Publication Date |
---|---|
SE9302152D0 true SE9302152D0 (sv) | 1993-06-22 |
SE9302152L SE9302152L (sv) | 1994-12-23 |
SE501439C2 SE501439C2 (sv) | 1995-02-13 |
Family
ID=20390371
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
SE9302152A SE501439C2 (sv) | 1993-06-22 | 1993-06-22 | Sätt och anordning för analys av polynukleotidsekvenser |
Country Status (9)
Country | Link |
---|---|
EP (2) | EP0705349B1 (sv) |
JP (1) | JP3722833B2 (sv) |
AT (1) | ATE185843T1 (sv) |
AU (1) | AU698553B2 (sv) |
CA (1) | CA2164715A1 (sv) |
DE (1) | DE69421277T2 (sv) |
ES (1) | ES2141828T3 (sv) |
SE (1) | SE501439C2 (sv) |
WO (1) | WO1995000669A1 (sv) |
Families Citing this family (79)
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JPH07203998A (ja) * | 1994-01-26 | 1995-08-08 | Hamamatsu Photonics Kk | 核酸塩基配列決定方法 |
GB9507238D0 (en) | 1995-04-07 | 1995-05-31 | Isis Innovation | Detecting dna sequence variations |
US5763175A (en) * | 1995-11-17 | 1998-06-09 | Lynx Therapeutics, Inc. | Simultaneous sequencing of tagged polynucleotides |
WO1997035033A1 (en) | 1996-03-19 | 1997-09-25 | Molecular Tool, Inc. | Method for determining the nucleotide sequence of a polynucleotide |
US6143529A (en) * | 1996-08-14 | 2000-11-07 | Exact Laboratories, Inc. | Methods for improving sensitivity and specificity of screening assays |
US5888778A (en) * | 1997-06-16 | 1999-03-30 | Exact Laboratories, Inc. | High-throughput screening method for identification of genetic mutations or disease-causing microorganisms using segmented primers |
US6566101B1 (en) | 1997-06-16 | 2003-05-20 | Anthony P. Shuber | Primer extension methods for detecting nucleic acids |
JP4789294B2 (ja) * | 1997-08-22 | 2011-10-12 | ソレクサ・インコーポレイテッド | ローリングプライマーを用いたdna伸長および分析 |
US6322968B1 (en) | 1997-11-21 | 2001-11-27 | Orchid Biosciences, Inc. | De novo or “universal” sequencing array |
AU754436B2 (en) | 1998-03-16 | 2002-11-14 | Millennium Pharmaceuticals, Inc. | Methods and compositions for diagnosing and treating chromosome-18p related disorders |
US6872521B1 (en) | 1998-06-16 | 2005-03-29 | Beckman Coulter, Inc. | Polymerase signaling assay |
US6245507B1 (en) | 1998-08-18 | 2001-06-12 | Orchid Biosciences, Inc. | In-line complete hyperspectral fluorescent imaging of nucleic acid molecules |
US6150105A (en) * | 1998-08-20 | 2000-11-21 | Genetic Assays, Inc. | Methods of screening nucleic acids for nucleotide variations |
AU779220B2 (en) | 1999-07-26 | 2005-01-13 | Clinical Micro Sensors, Inc. | Sequence determination of nucleic acids using electronic detection |
US6528319B1 (en) | 1999-09-02 | 2003-03-04 | Amersham Biosciences Corp | Method for anchoring oligonucleotides to a substrate |
US6586177B1 (en) | 1999-09-08 | 2003-07-01 | Exact Sciences Corporation | Methods for disease detection |
WO2001025485A2 (en) * | 1999-10-06 | 2001-04-12 | Amersham Biosciences Corp | Method for detecting mutations using arrayed primer extension |
US6596483B1 (en) | 1999-11-12 | 2003-07-22 | Motorola, Inc. | System and method for detecting molecules using an active pixel sensor |
DE10010282B4 (de) * | 2000-02-25 | 2006-11-16 | Epigenomics Ag | Verfahren zur Detektion von Cytosin-Methylierung in DNA Proben |
DE10010280B4 (de) | 2000-02-25 | 2006-08-10 | Epigenomics Ag | Verfahren zur Detektion von Cytosin-Methylierung in DNA Proben |
AU4099001A (en) * | 2000-03-13 | 2001-09-24 | Genset | Nucleic acid detection method and system |
US6376191B1 (en) * | 2000-03-22 | 2002-04-23 | Mergen, Ltd. | Microarray-based analysis of polynucleotide sequence variations |
ATE353975T1 (de) | 2000-04-06 | 2007-03-15 | Epigenomics Ag | Diagnose von mit apoptose assoziierten erkrankungen mittels ermittlung des methylierungszustandes von apoptose-assozierten genen |
JP2003000268A (ja) | 2000-08-25 | 2003-01-07 | Pfizer Prod Inc | 血管新生にかかわる疾患を診断および治療するための方法および組成物 |
AU2001216942A1 (en) * | 2000-11-24 | 2002-06-03 | Asper Ou | Method of optimising the sequences of synthetic nucleic acids |
GB0105790D0 (en) * | 2001-03-08 | 2001-04-25 | Expresson Biosystems Ltd | Detecting binding of mRNA to an oligonnucleotide array using RNA dependent nucleic acid modifying enzymes |
US6777189B2 (en) | 2001-03-30 | 2004-08-17 | Applera Corporation | Nucleic acid analysis using non-templated nucleotide addition |
US6653082B2 (en) | 2001-05-17 | 2003-11-25 | Baylor College Of Medicine | Substrate-bound cleavage assay for nucleic acid analysis |
EP1578913B1 (en) | 2001-08-14 | 2014-02-19 | Sentigen Biosciences, Inc. | Nucleic acids and proteins of insect or83b odorant receptor genes and uses thereof |
DE10154317B4 (de) | 2001-10-26 | 2005-06-09 | Epigenomics Ag | Verfahren zum Nachweis von Cytosin-Methylierungen in immobilisierten DNA Proben |
EP1340818A1 (en) | 2002-02-27 | 2003-09-03 | Epigenomics AG | Method and nucleic acids for the analysis of a colon cell proliferative disorder |
DE10245145B4 (de) * | 2002-09-27 | 2004-12-02 | IPK-Institut für Pflanzengenetik und Kulturpflanzenforschung | Verfahren zum Nachweis von SNPs auf polydimensionalen Microarrays |
WO2004035803A2 (en) | 2002-10-01 | 2004-04-29 | Epigenomics Ag | Method and nucleic acids for the treatment of breast cell proliferative disorders |
WO2005059172A2 (en) | 2003-12-11 | 2005-06-30 | Epigenomics Ag | Method and nucleic acids for the improved treatment of breast cell proliferative disorders |
US20050053980A1 (en) | 2003-06-20 | 2005-03-10 | Illumina, Inc. | Methods and compositions for whole genome amplification and genotyping |
EP2354250A1 (en) | 2003-06-23 | 2011-08-10 | Epigenomics AG | Methods and nucleic acids for analyses of colorectal cell proliferative disorders |
US8163488B2 (en) | 2003-06-23 | 2012-04-24 | Epigenomics Ag | Methods and nucleic acids for analysis of colon proliferative disorders |
JP4955385B2 (ja) | 2003-06-23 | 2012-06-20 | エピゲノミクス アクチェンゲゼルシャフト | 結腸直腸細胞増殖障害の分析のための方法及び核酸 |
US9181587B2 (en) | 2003-12-01 | 2015-11-10 | Epigenomics Ag | Methods and nucleic acids for the analysis of gene expression associated with the development of prostate cell proliferative disorders |
WO2006002344A1 (en) | 2004-06-23 | 2006-01-05 | Epigenomics Ag | Methods and nucleic acids for the detection of metastasis of colon cell proliferative disorders |
US20090298054A1 (en) | 2004-07-18 | 2009-12-03 | Epigenomics Ag | Epigenetic methods and nucleic acids for the detection of breast cell proliferative disorders |
EP1784508B1 (en) | 2004-08-09 | 2012-10-03 | Generation Biotech, LLC | Method for nucleic acid isolation and amplification |
WO2006047787A2 (en) | 2004-10-27 | 2006-05-04 | Exact Sciences Corporation | Method for monitoring disease progression or recurrence |
EP2213749A1 (en) | 2004-12-02 | 2010-08-04 | Epigenomics AG | Methods and nucleic acids for the analysis of gene expression associated with the prognosis of prostate cell proliferative disorders |
EA013634B1 (ru) | 2005-04-15 | 2010-06-30 | Эпиджиномикс Аг | Способы и нуклеиновые кислоты для анализов клеточных пролиферативных нарушений |
WO2007044071A2 (en) | 2005-04-21 | 2007-04-19 | Exact Sciences Corporation | Analysis of heterogeneous nucleic acid samples |
EP2345743A1 (en) | 2005-05-02 | 2011-07-20 | University of Southern California | DNA methylation markers associated with the CpG island methylator phenotyp (CIMP) in human colorectal cancer |
EP1934369A2 (en) | 2005-09-29 | 2008-06-25 | Epigenomics AG | Methods and nucleic acids for the analysis of gene expression associated with tissue classification |
US8912129B2 (en) | 2005-11-17 | 2014-12-16 | Epigenomics Ag | Method for the determination of the DNA methylation level of a CPG position in identical cells within a tissue sample |
ES2587068T3 (es) | 2006-04-17 | 2016-10-20 | Epigenomics Ag | Métodos y ácidos nucleicos para la detección de desórdenes celulares proliferativos colorrectales |
CA2657576C (en) | 2006-07-14 | 2023-10-31 | The Regents Of The University Of California | Cancer biomarkers and methods of use thereof |
US20100143902A1 (en) | 2006-07-21 | 2010-06-10 | Epigenomics Ag | Methods and nucleic acids for analyses of cellular proliferative disorders |
ES2615354T3 (es) | 2006-11-24 | 2017-06-06 | Epigenomics Ag | Métodos y ácidos nucleicos para el análisis de la expresión de genes asociados con el desarrollo de trastornos proliferativos de células de próstata |
PL2258871T3 (pl) | 2007-01-19 | 2014-10-31 | Epigenomics Ag | Sposoby i kwasy nukleinowe do analizy zaburzeń proliferacyjnych komórki |
AU2008254986A1 (en) * | 2007-05-14 | 2008-11-27 | Insight Genetics, Inc. | Methods of screening nucleic acids for single nucleotide variations |
US7635566B2 (en) | 2007-06-29 | 2009-12-22 | Population Genetics Technologies Ltd. | Methods and compositions for isolating nucleic acid sequence variants |
EP2302069A1 (en) | 2007-12-11 | 2011-03-30 | Epigenomics AG | Methods and nucleic acids for analyses of cell proliferative disorders |
ES2669439T3 (es) | 2009-06-26 | 2018-05-25 | Epigenomics Ag | Métodos y ácidos nucleicos para el análisis del carcinoma de vejiga |
US20110104695A1 (en) | 2009-11-05 | 2011-05-05 | Epigenomics Ag | Methods of predicting therapeutic efficacy of cancer therapy |
WO2011139721A1 (en) | 2010-04-27 | 2011-11-10 | The Regents Of The University Of California | Cancer biomarkers and methods of use thereof |
DK2729579T3 (en) | 2011-07-08 | 2018-01-08 | Epigenomics Ag | PROCEDURES AND NUCLEIC ACIDS FOR DETERMINING THE PROGRAM FOR A CANCER PATIENT |
CN105378108A (zh) | 2013-03-13 | 2016-03-02 | 雅培分子公司 | 用于分离核酸的***和方法 |
ES2712798T3 (es) | 2013-03-14 | 2019-05-14 | Exact Sciences Dev Co Llc | Detección de neoplasias |
CN105378107A (zh) | 2013-03-14 | 2016-03-02 | 雅培分子公司 | 多重甲基化-特异性扩增***和方法 |
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AU2017260630B2 (en) | 2016-05-05 | 2023-07-13 | Exact Sciences Corporation | Detection of lung neoplasia by analysis of methylated DNA |
CN109642228B (zh) | 2016-07-19 | 2022-09-13 | 精密科学发展有限责任公司 | 甲基化对照dna |
US20180066320A1 (en) | 2016-09-02 | 2018-03-08 | Mayo Foundation For Medical Education And Research | Detecting hepatocellular carcinoma |
CN110475875B (zh) | 2017-01-27 | 2024-06-25 | 精密科学公司 | 通过分析甲基化dna检测结肠瘤形成 |
US20220187301A1 (en) | 2018-09-14 | 2022-06-16 | Prelude Corporation | Method of selection for treatment of subjects at risk of invasive breast cancer |
EP3880847A2 (en) | 2018-11-16 | 2021-09-22 | Oslo Universitetssykehus HF | Methods and compositions for characterizing bladder cancer |
KR20220092561A (ko) | 2019-10-31 | 2022-07-01 | 메이오 파운데이션 포 메디칼 에쥬케이션 앤드 리써치 | 난소암 검출 |
CA3188230A1 (en) | 2020-08-19 | 2022-02-24 | John B. Kisiel | Detecting non-hodgkin lymphoma |
WO2022165247A1 (en) | 2021-01-29 | 2022-08-04 | Mayo Foundation For Medical Education And Research | Detecting the presence or absence of multiple types of cancer |
Family Cites Families (5)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5202231A (en) * | 1987-04-01 | 1993-04-13 | Drmanac Radoje T | Method of sequencing of genomes by hybridization of oligonucleotide probes |
GB8810400D0 (en) * | 1988-05-03 | 1988-06-08 | Southern E | Analysing polynucleotide sequences |
US5547839A (en) * | 1989-06-07 | 1996-08-20 | Affymax Technologies N.V. | Sequencing of surface immobilized polymers utilizing microflourescence detection |
WO1992010588A1 (en) * | 1990-12-06 | 1992-06-25 | Affymax Technologies N.V. | Sequencing by hybridization of a target nucleic acid to a matrix of defined oligonucleotides |
US6004744A (en) * | 1991-03-05 | 1999-12-21 | Molecular Tool, Inc. | Method for determining nucleotide identity through extension of immobilized primer |
-
1993
- 1993-06-22 SE SE9302152A patent/SE501439C2/sv not_active IP Right Cessation
-
1994
- 1994-06-22 AU AU72121/94A patent/AU698553B2/en not_active Ceased
- 1994-06-22 EP EP94921363A patent/EP0705349B1/en not_active Expired - Lifetime
- 1994-06-22 EP EP99200676A patent/EP0969103A3/en not_active Withdrawn
- 1994-06-22 CA CA002164715A patent/CA2164715A1/en not_active Abandoned
- 1994-06-22 JP JP50308095A patent/JP3722833B2/ja not_active Expired - Fee Related
- 1994-06-22 AT AT94921363T patent/ATE185843T1/de not_active IP Right Cessation
- 1994-06-22 DE DE69421277T patent/DE69421277T2/de not_active Expired - Fee Related
- 1994-06-22 WO PCT/US1994/007086 patent/WO1995000669A1/en active IP Right Grant
- 1994-06-22 ES ES94921363T patent/ES2141828T3/es not_active Expired - Lifetime
Also Published As
Publication number | Publication date |
---|---|
AU698553B2 (en) | 1998-10-29 |
WO1995000669A1 (en) | 1995-01-05 |
EP0705349A1 (en) | 1996-04-10 |
SE501439C2 (sv) | 1995-02-13 |
CA2164715A1 (en) | 1995-01-05 |
DE69421277T2 (de) | 2000-05-31 |
SE9302152L (sv) | 1994-12-23 |
JP3722833B2 (ja) | 2005-11-30 |
EP0969103A3 (en) | 2004-01-02 |
EP0969103A2 (en) | 2000-01-05 |
AU7212194A (en) | 1995-01-17 |
EP0705349B1 (en) | 1999-10-20 |
JPH09501312A (ja) | 1997-02-10 |
ATE185843T1 (de) | 1999-11-15 |
DE69421277D1 (de) | 1999-11-25 |
ES2141828T3 (es) | 2000-04-01 |
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Legal Events
Date | Code | Title | Description |
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NUG | Patent has lapsed | ||
NUG | Patent has lapsed |