HK1254399A1 - 對分隔長片段序列進行組裝的方法和裝置 - Google Patents

對分隔長片段序列進行組裝的方法和裝置

Info

Publication number
HK1254399A1
HK1254399A1 HK18113476.6A HK18113476A HK1254399A1 HK 1254399 A1 HK1254399 A1 HK 1254399A1 HK 18113476 A HK18113476 A HK 18113476A HK 1254399 A1 HK1254399 A1 HK 1254399A1
Authority
HK
Hong Kong
Prior art keywords
fragment sequences
long fragment
separated long
assembling separated
assembling
Prior art date
Application number
HK18113476.6A
Other languages
English (en)
Inventor
謝寅龍
黃偉華
李淨淨
郭瑞東
唐靜波
鄧超
Original Assignee
深圳華大智造科技有限公司
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by 深圳華大智造科技有限公司 filed Critical 深圳華大智造科技有限公司
Publication of HK1254399A1 publication Critical patent/HK1254399A1/zh

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Zoology (AREA)
  • Biotechnology (AREA)
  • Wood Science & Technology (AREA)
  • General Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Medical Informatics (AREA)
  • Analytical Chemistry (AREA)
  • Theoretical Computer Science (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
HK18113476.6A 2016-02-26 2018-10-21 對分隔長片段序列進行組裝的方法和裝置 HK1254399A1 (zh)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PCT/CN2016/074665 WO2017143585A1 (zh) 2016-02-26 2016-02-26 对分隔长片段序列进行组装的方法和装置

Publications (1)

Publication Number Publication Date
HK1254399A1 true HK1254399A1 (zh) 2019-07-19

Family

ID=59685953

Family Applications (1)

Application Number Title Priority Date Filing Date
HK18113476.6A HK1254399A1 (zh) 2016-02-26 2018-10-21 對分隔長片段序列進行組裝的方法和裝置

Country Status (3)

Country Link
CN (1) CN108350495B (zh)
HK (1) HK1254399A1 (zh)
WO (1) WO2017143585A1 (zh)

Families Citing this family (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN111128303B (zh) * 2018-10-31 2023-09-15 深圳华大生命科学研究院 基于已知序列确定目标物种中对应序列的方法和***
CN109658981B (zh) * 2018-12-10 2022-10-04 海南大学 一种单细胞测序的数据分类方法
CN111755075B (zh) * 2019-03-28 2023-09-29 深圳华大生命科学研究院 对免疫组库高通量测序样本间序列污染进行过滤的方法
CN111986729B (zh) * 2019-05-21 2024-07-12 深圳华大基因科技服务有限公司 对骨架序列进行优化的方法和***及应用
CN110544510B (zh) * 2019-05-31 2023-03-24 中南大学 基于邻接代数模型及质量等级评估的contig集成方法
CN110534158B (zh) * 2019-08-16 2023-08-04 浪潮电子信息产业股份有限公司 一种基因序列比对方法、装置、服务器及介质
CN112825267B (zh) * 2019-11-21 2024-05-14 深圳华大基因科技服务有限公司 确定小核酸序列集合的方法及其应用
CN111564182B (zh) * 2020-05-12 2024-02-09 西藏自治区农牧科学院水产科学研究所 一种高重复原鮡属鱼类的染色体级别组装的方法
CN112634989A (zh) * 2020-12-29 2021-04-09 山东建筑大学 基于片段重叠群的双面基因组片段填充方法及装置
CN112802554B (zh) * 2021-01-28 2023-09-22 中国科学院成都生物研究所 一种基于二代数据的动物线粒体基因组组装方法
CN113963749B (zh) * 2021-09-10 2024-07-12 华南农业大学 高通量测序数据自动化组装方法、***、设备及存储介质
CN114333989B (zh) * 2021-12-31 2023-06-13 天津诺禾致源生物信息科技有限公司 性状定位的方法及装置
CN116168763A (zh) * 2022-09-06 2023-05-26 安诺优达基因科技(北京)有限公司 同源四倍体基因组分型组装的方法和装置、构建染色体的方法和装置及其应用
CN115641911B (zh) * 2022-10-19 2023-05-23 哈尔滨工业大学 一种针对序列间重叠检测的方法

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102206704B (zh) * 2011-03-02 2013-11-20 深圳华大基因科技服务有限公司 组装基因组序列的方法和装置
CN102789553B (zh) * 2012-07-23 2015-04-15 中国水产科学研究院 利用长转录组测序结果装配基因组的方法及装置
US9328382B2 (en) * 2013-03-15 2016-05-03 Complete Genomics, Inc. Multiple tagging of individual long DNA fragments
WO2015051006A2 (en) * 2013-10-01 2015-04-09 Complete Genomics, Inc. Phasing and linking processes to identify variations in a genome
CN104164479B (zh) * 2014-04-04 2017-09-19 深圳华大基因科技服务有限公司 杂合基因组处理方法
CN104017883B (zh) * 2014-06-18 2015-11-18 深圳华大基因科技服务有限公司 组装基因组序列的方法和***

Also Published As

Publication number Publication date
WO2017143585A1 (zh) 2017-08-31
CN108350495B (zh) 2021-10-01
CN108350495A (zh) 2018-07-31

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