EP1264172A1 - Quantifizierung von in einer flussigkeit enthaltenen zielmolekulen - Google Patents
Quantifizierung von in einer flussigkeit enthaltenen zielmolekulenInfo
- Publication number
- EP1264172A1 EP1264172A1 EP01915041A EP01915041A EP1264172A1 EP 1264172 A1 EP1264172 A1 EP 1264172A1 EP 01915041 A EP01915041 A EP 01915041A EP 01915041 A EP01915041 A EP 01915041A EP 1264172 A1 EP1264172 A1 EP 1264172A1
- Authority
- EP
- European Patent Office
- Prior art keywords
- biopolymers
- electrode
- measurement
- liquid
- step lit
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Withdrawn
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/001—Enzyme electrodes
- C12Q1/004—Enzyme electrodes mediator-assisted
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6816—Hybridisation assays characterised by the detection means
- C12Q1/6825—Nucleic acid detection involving sensors
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/543—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
- G01N33/54366—Apparatus specially adapted for solid-phase testing
- G01N33/54373—Apparatus specially adapted for solid-phase testing involving physiochemical end-point determination, e.g. wave-guides, FETS, gratings
- G01N33/5438—Electrodes
Definitions
- the invention relates to a method for the detection and / or quantification of target molecules contained in a liquid.
- a chip for the detection of polynucleotide sequences is known from WO 96/01836.
- a large number of miniaturized reaction fields are provided on the chip produced from a silicon substrate.
- a probe is bound to each of the reaction fields.
- hybridization occurs with one of the specified probes.
- Hybridization can e.g. can be detected by a fluorophore label provided on the probe.
- DE 198 08 884.1 describes a method for the detection of chemical substances using two interacting fluorophoric groups which are bound to a molecule. When the molecule attaches specifically to the chemical substance to be detected, the interaction between the fluorophoric groups is changed.
- WO 99/47700 relates to a method for the detection of a target molecule by means of fluorescence. It is a provided with a fluorophoric group probe bound to a solid phase ge ⁇ . If the target sequence is present in the solution, a second fluorophoric group is bound in the vicinity of the first fluorophoric groups in such a way that a radiation-free energy transfer can take place between the two fluorophoric groups.
- US 5,591,578 describes a method for the detection of polynucleotide sequences using redox indicators.
- a probe that is complementary to the target polynucleotide sequence is covalently bound to an electrode.
- Covalently redox-active transition metal complexes are bound to the probe.
- a redox signal can be measured at the electrode.
- DE 196 28 171 discloses a process for the purification and enrichment of charge-carrying first molecules which have a specific affinity for second molecules bound to an electrode.
- a voltage protocol is carried out in such a way that the first molecules are enriched on the electrode.
- the object of the invention is to eliminate the disadvantages of the prior art.
- a sensitive, simple and inexpensive electrochemical method for the detection and / or quantification of small amounts of first biopolymers in a liquid is to be specified.
- a method for the detection and / or quantification of first biopolymers contained in a liquid is provided, with the following steps:
- the proposed method enables sensitive detection of first biopolymers in a liquid.
- the use of electrodes provided with a plastic surface allows the method to be carried out inexpensively.
- the method also enables the first biopolymers contained in the liquid to be quantified.
- the first biopolymer can in particular be a single-stranded DNA or RNA complementary to the second biopolymer.
- the second biopolymers are preferably covalently bonded to the plastic surface.
- osmium tetroxide and bipyridine a particularly high sensitivity is achieved.
- the plastic is an electrically conductive composite material, e.g. a composite of carbon fibers and polycarbonate.
- the electrode as a whole is advantageously made of the plastic. Such electrodes can be manufactured in an inexpensive pressing process.
- step lit. e performed one of the following measurements: DC voltage measurement, cyclovoltammetric measurement, chronoamperometric measurement, chronovoltammetric measurement. Furthermore, in step lit. e a differtial pulse voltammogram or an impedance spectrum are recorded. It is also possible in step lit. e to measure an AC signal in a phase-sensitive manner. A DC signal can be impressed on the AC signal. To quantify the first biopolymers, a peak of the measurement signal can be integrated. As
- the distance between the peak height and the background can be used as a quantification variable.
- the electrode can be removed after step lit. e be rinsed or heated.
- a thermal denaturation of the first biopolymers can be achieved by heating the electrode.
- Certain first biopolymers preferably bind at a predetermined temperature.
- the specificity of the method can be increased further by heating or adjusting the temperature.
- the specificity or the stringency can also be increased by a suitable adjustment of the pH in the liquid.
- the first biopolymers are lit. a subjected to a polymerase chain reaction. This enables the detection of particularly small amounts of the first biopolymers.
- the only figure shows a differtial pulse voltammogram of an unoccupied one with single-stranded oligonucleotides occupied and a working electrode with hybridized oligonucleotides after a treatment with osmium tetroxide and bipyridine.
- the working electrodes each consist of carbon composite material, which is preferably composed of 30% carbon fibers and 70% polycarbonate.
- Oligonucleotides with the sequence 5 * -GCC TTC CCA ACC ATT CCC TTA-3 ' were covalently bound to the surface of the working electrodes using carbodiimide using a standard method.
- the occupancy density was 15 mol / mm 2 '.
- the hybridization of the oligonucleotides was carried out in a buffered solution of 0.5-fold TBE (TRIS borate EDTA), 0.5M NaCl and 100 mol / ⁇ l of complementary oligonucleotides. After the hybridization, the working electrodes were washed stringently. An untreated, one with single-stranded oligonucleotides and one with hybridized oligonucleotides working electrode was immersed for 30 seconds in a solution of 2 mM Os0 and 13 mM bipyridine. The measurement was carried out using a platinum gene electrode and an Ag / AgCl reference electrode with an Autolab
- the hybridization of the target oligonucleotides to the working electrode can be accelerated by applying a voltage.
- the density of oligonucleotides on the surface of the working electrode can be increased by adding salt during the coating or by basic pretreatment of the surface. For example, an occupancy density of 85fmol / mm 2 can be achieved in a 10mM MgCl 2 solution. With a three-hour pretreatment of the surface in 5M NaOH, an occupancy density of 750fmol / mm 2 can be achieved.
- the electrode after step lit. yours opposite voltage are applied.
- a thermal denaturation of the first biopolymers can be achieved by heating the electrode.
- the specificity of the method can also be increased by heating or adjusting the temperature of the electrode, because predetermined first biopolymers bind at a specific temperature.
Landscapes
- Chemical & Material Sciences (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Organic Chemistry (AREA)
- Immunology (AREA)
- Zoology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Molecular Biology (AREA)
- Wood Science & Technology (AREA)
- Analytical Chemistry (AREA)
- General Health & Medical Sciences (AREA)
- Biotechnology (AREA)
- Microbiology (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- Genetics & Genomics (AREA)
- Urology & Nephrology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biophysics (AREA)
- Biomedical Technology (AREA)
- General Engineering & Computer Science (AREA)
- Hematology (AREA)
- Cell Biology (AREA)
- Food Science & Technology (AREA)
- Medicinal Chemistry (AREA)
- General Physics & Mathematics (AREA)
- Pathology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Investigating Or Analyzing Materials By The Use Of Electric Means (AREA)
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
DE10009715 | 2000-03-01 | ||
DE10009715 | 2000-03-01 | ||
PCT/DE2001/000736 WO2001065246A1 (de) | 2000-03-01 | 2001-02-28 | Quantifizierung von in einer flüssigkeit enthaltenen zielmolekülen |
Publications (1)
Publication Number | Publication Date |
---|---|
EP1264172A1 true EP1264172A1 (de) | 2002-12-11 |
Family
ID=7632936
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
EP01915041A Withdrawn EP1264172A1 (de) | 2000-03-01 | 2001-02-28 | Quantifizierung von in einer flussigkeit enthaltenen zielmolekulen |
Country Status (6)
Country | Link |
---|---|
US (1) | US20030175737A1 (ja) |
EP (1) | EP1264172A1 (ja) |
JP (1) | JP2003525449A (ja) |
AU (1) | AU2001242274A1 (ja) |
CA (1) | CA2401830A1 (ja) |
WO (1) | WO2001065246A1 (ja) |
Families Citing this family (9)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
AU2005212396A1 (en) | 2004-02-06 | 2005-08-25 | Bayer Healthcare Llc | Oxidizable species as an internal reference for biosensors and method of use |
US7655404B2 (en) | 2004-04-29 | 2010-02-02 | Agency For Science, Technology And Research | Method and device for detection of nucleic acids and/or polypeptides |
JP5385607B2 (ja) | 2005-07-20 | 2014-01-08 | バイエル・ヘルスケア・エルエルシー | ゲート化電流測定器 |
RU2426107C2 (ru) | 2005-09-30 | 2011-08-10 | БАЙЕР ХЕЛТКЭА ЭлЭлСи | Вольтамперометрический способ определения концентрации аналита в образце и устройство для определения концентрации аналита |
EP2679150B1 (en) | 2006-10-24 | 2020-07-22 | Ascensia Diabetes Care Holdings AG | Transient decay amperometry |
WO2009076302A1 (en) | 2007-12-10 | 2009-06-18 | Bayer Healthcare Llc | Control markers for auto-detection of control solution and methods of use |
US10876148B2 (en) | 2018-11-14 | 2020-12-29 | Element Biosciences, Inc. | De novo surface preparation and uses thereof |
US10704094B1 (en) | 2018-11-14 | 2020-07-07 | Element Biosciences, Inc. | Multipart reagents having increased avidity for polymerase binding |
US20200149095A1 (en) * | 2018-11-14 | 2020-05-14 | Element Biosciences, Inc. | Low binding supports for improved solid-phase dna hybridization and amplification |
Family Cites Families (9)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
DE4123933A1 (de) * | 1991-07-19 | 1993-01-21 | Krupp Corpoplast Masch | Vorformling, verfahren zur herstellung des vorformlings sowie verfahren zur beheizung des vorformlings |
US5591578A (en) * | 1993-12-10 | 1997-01-07 | California Institute Of Technology | Nucleic acid mediated electron transfer |
US5871918A (en) * | 1996-06-20 | 1999-02-16 | The University Of North Carolina At Chapel Hill | Electrochemical detection of nucleic acid hybridization |
US5981203A (en) * | 1994-04-26 | 1999-11-09 | The Regents Of The University Of Michigan | Unitary sandwich enzyme immunoassay cassette, device and method of use |
AU724600B2 (en) * | 1995-06-27 | 2000-09-28 | University Of North Carolina At Chapel Hill, The | Electrochemical detection of nucleic acid hybridization |
US6060327A (en) * | 1997-05-14 | 2000-05-09 | Keensense, Inc. | Molecular wire injection sensors |
DE19725190A1 (de) * | 1997-06-14 | 1998-12-17 | Innova Gmbh | Vorrichtungen mit integrierten Elektroden aus elektrisch leitfähigen Kunststoffen |
AU4833899A (en) * | 1998-06-24 | 2000-01-10 | Therasense, Inc. | Multi-sensor array for electrochemical recognition of nucleotide sequences and methods |
JP2967197B1 (ja) * | 1998-08-11 | 1999-10-25 | 九州大学長 | 遺伝子の特殊一本鎖核酸部位の検出用プローブ、遺伝子の特殊一本鎖核酸部位の検出方法およびその装置 |
-
2001
- 2001-02-28 EP EP01915041A patent/EP1264172A1/de not_active Withdrawn
- 2001-02-28 JP JP2001563893A patent/JP2003525449A/ja active Pending
- 2001-02-28 CA CA002401830A patent/CA2401830A1/en not_active Abandoned
- 2001-02-28 AU AU2001242274A patent/AU2001242274A1/en not_active Abandoned
- 2001-02-28 US US10/220,401 patent/US20030175737A1/en not_active Abandoned
- 2001-02-28 WO PCT/DE2001/000736 patent/WO2001065246A1/de not_active Application Discontinuation
Non-Patent Citations (1)
Title |
---|
See references of WO0165246A1 * |
Also Published As
Publication number | Publication date |
---|---|
AU2001242274A1 (en) | 2001-09-12 |
CA2401830A1 (en) | 2001-09-07 |
WO2001065246A1 (de) | 2001-09-07 |
JP2003525449A (ja) | 2003-08-26 |
US20030175737A1 (en) | 2003-09-18 |
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Legal Events
Date | Code | Title | Description |
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PUAI | Public reference made under article 153(3) epc to a published international application that has entered the european phase |
Free format text: ORIGINAL CODE: 0009012 |
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AK | Designated contracting states |
Kind code of ref document: A1 Designated state(s): AT BE CH CY DE DK ES FI FR GB GR IE IT LI LU MC NL PT SE TR |
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AX | Request for extension of the european patent |
Free format text: AL;LT;LV;MK;RO;SI |
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17P | Request for examination filed |
Effective date: 20020916 |
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STAA | Information on the status of an ep patent application or granted ep patent |
Free format text: STATUS: THE APPLICATION IS DEEMED TO BE WITHDRAWN |
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18D | Application deemed to be withdrawn |
Effective date: 20040901 |