DK1299532T3 - Forbedrende kombinatoriske biblioteker ved rekombination i gær og analysefremgangsmåder - Google Patents

Forbedrende kombinatoriske biblioteker ved rekombination i gær og analysefremgangsmåder

Info

Publication number
DK1299532T3
DK1299532T3 DK01945414T DK01945414T DK1299532T3 DK 1299532 T3 DK1299532 T3 DK 1299532T3 DK 01945414 T DK01945414 T DK 01945414T DK 01945414 T DK01945414 T DK 01945414T DK 1299532 T3 DK1299532 T3 DK 1299532T3
Authority
DK
Denmark
Prior art keywords
recombination
yeast
improving
combinatorial libraries
assay methods
Prior art date
Application number
DK01945414T
Other languages
English (en)
Inventor
Gilles Truan
Valerie Abecassis
Denis Pompon
Original Assignee
Aventis Pharma Sa
Centre Nat Rech Scient
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Aventis Pharma Sa, Centre Nat Rech Scient filed Critical Aventis Pharma Sa
Application granted granted Critical
Publication of DK1299532T3 publication Critical patent/DK1299532T3/da

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/66—General methods for inserting a gene into a vector to form a recombinant vector using cleavage and ligation; Use of non-functional linkers or adaptors, e.g. linkers containing the sequence for a restriction endonuclease
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/102—Mutagenizing nucleic acids
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/102—Mutagenizing nucleic acids
    • C12N15/1027—Mutagenizing nucleic acids by DNA shuffling, e.g. RSR, STEP, RPR
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C12N15/1058—Directional evolution of libraries, e.g. evolution of libraries is achieved by mutagenesis and screening or selection of mixed population of organisms
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C12N15/1072—Differential gene expression library synthesis, e.g. subtracted libraries, differential screening
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C12N15/1079—Screening libraries by altering the phenotype or phenotypic trait of the host
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C12N15/1082—Preparation or screening gene libraries by chromosomal integration of polynucleotide sequences, HR-, site-specific-recombination, transposons, viral vectors
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/64—General methods for preparing the vector, for introducing it into the cell or for selecting the vector-containing host
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/0004—Oxidoreductases (1.)
    • C12N9/0012—Oxidoreductases (1.) acting on nitrogen containing compounds as donors (1.4, 1.5, 1.6, 1.7)
    • C12N9/0036—Oxidoreductases (1.) acting on nitrogen containing compounds as donors (1.4, 1.5, 1.6, 1.7) acting on NADH or NADPH (1.6)
    • C12N9/0038—Oxidoreductases (1.) acting on nitrogen containing compounds as donors (1.4, 1.5, 1.6, 1.7) acting on NADH or NADPH (1.6) with a heme protein as acceptor (1.6.2)
    • C12N9/0042—NADPH-cytochrome P450 reductase (1.6.2.4)

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Organic Chemistry (AREA)
  • Biomedical Technology (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Plant Pathology (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Medicinal Chemistry (AREA)
  • Ecology (AREA)
  • Virology (AREA)
  • Cell Biology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
  • Peptides Or Proteins (AREA)
  • Enzymes And Modification Thereof (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
  • Soy Sauces And Products Related Thereto (AREA)
DK01945414T 2000-06-14 2001-06-13 Forbedrende kombinatoriske biblioteker ved rekombination i gær og analysefremgangsmåder DK1299532T3 (da)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
FR0007555A FR2810339B1 (fr) 2000-06-14 2000-06-14 Banques combinatoires ameliorees par recombinaison dans la levure et procede d'analyse
PCT/FR2001/001831 WO2001096555A1 (fr) 2000-06-14 2001-06-13 Banques combinatoires ameliorees par recombinaison dans la levure et procede d'analyse

Publications (1)

Publication Number Publication Date
DK1299532T3 true DK1299532T3 (da) 2008-06-16

Family

ID=8851235

Family Applications (1)

Application Number Title Priority Date Filing Date
DK01945414T DK1299532T3 (da) 2000-06-14 2001-06-13 Forbedrende kombinatoriske biblioteker ved rekombination i gær og analysefremgangsmåder

Country Status (18)

Country Link
US (1) US20020160380A1 (da)
EP (1) EP1299532B1 (da)
JP (1) JP5116931B2 (da)
KR (1) KR20030027899A (da)
AT (1) ATE391776T1 (da)
AU (2) AU6763901A (da)
BR (1) BR0111680B1 (da)
CA (1) CA2411740C (da)
DE (1) DE60133556T2 (da)
DK (1) DK1299532T3 (da)
ES (1) ES2301553T3 (da)
FR (1) FR2810339B1 (da)
IL (2) IL153345A0 (da)
MX (1) MXPA02012214A (da)
NO (1) NO331201B1 (da)
NZ (1) NZ523222A (da)
WO (1) WO2001096555A1 (da)
ZA (1) ZA200209604B (da)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030124601A1 (en) * 2000-06-01 2003-07-03 Masuhiro Nishimura Method of detecting and quantifying human p450 molecular species and probe and kit for this method
KR100475133B1 (ko) * 2002-09-13 2005-03-10 한국생명공학연구원 효모 표면 발현 벡터를 이용하여 변이 리파제를스크리닝하는 방법 및 신규 변이 리파제
US7833703B2 (en) * 2003-04-11 2010-11-16 ESBATech, an Alcon Biomedical Research Unit, LLC Method for the construction of randomized gene sequence libraries in cells
ES2705694T3 (es) * 2008-06-13 2019-03-26 Codexis Inc Método de síntesis de variantes de polinucleótidos
EP2406377B1 (en) * 2009-03-12 2016-01-06 Bigtec Private Limited A polynucleotide and polypeptide sequence and methods thereof

Family Cites Families (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5605793A (en) * 1994-02-17 1997-02-25 Affymax Technologies N.V. Methods for in vitro recombination
FR2738840B1 (fr) * 1995-09-19 1997-10-31 Rhone Poulenc Rorer Sa Souches de levures genetiquement modifiees
US6479258B1 (en) * 1995-12-07 2002-11-12 Diversa Corporation Non-stochastic generation of genetic vaccines
WO1999040208A1 (en) * 1998-02-05 1999-08-12 The General Hospital Corporation In vivo construction of dna libraries
US6902918B1 (en) * 1998-05-21 2005-06-07 California Institute Of Technology Oxygenase enzymes and screening method
CA2273616A1 (en) * 1998-06-08 1999-12-08 The Board Of Trustees Of The Leland Stanford Junior University Method for parallel screening of allelic variation
MXPA01000224A (es) * 1998-07-28 2002-10-17 California Inst Of Techn Expresion de proteinas eucarioticas funcionales.
US20030153042A1 (en) * 1998-07-28 2003-08-14 California Institute Of Technology Expression of functional eukaryotic proteins
DE60044223D1 (de) * 1999-01-19 2010-06-02 Maxygen Inc Durch oligonukleotide-vermittelte nukleinsäuren-rekombination

Also Published As

Publication number Publication date
AU2001267639B2 (en) 2006-02-02
KR20030027899A (ko) 2003-04-07
JP2004506416A (ja) 2004-03-04
NO331201B1 (no) 2011-10-31
BR0111680B1 (pt) 2014-03-18
FR2810339A1 (fr) 2001-12-21
FR2810339B1 (fr) 2004-12-10
IL153345A0 (en) 2003-07-06
ATE391776T1 (de) 2008-04-15
ZA200209604B (en) 2003-11-26
US20020160380A1 (en) 2002-10-31
NZ523222A (en) 2005-08-26
DE60133556D1 (de) 2008-05-21
MXPA02012214A (es) 2003-09-10
NO20025962D0 (no) 2002-12-12
CA2411740C (fr) 2013-05-28
DE60133556T2 (de) 2009-04-30
EP1299532A1 (fr) 2003-04-09
ES2301553T3 (es) 2008-07-01
IL153345A (en) 2010-04-29
NO20025962L (no) 2003-02-04
JP5116931B2 (ja) 2013-01-09
CA2411740A1 (fr) 2001-12-20
WO2001096555A1 (fr) 2001-12-20
BR0111680A (pt) 2003-07-01
EP1299532B1 (fr) 2008-04-09
AU6763901A (en) 2001-12-24

Similar Documents

Publication Publication Date Title
DK1534830T3 (da) In vito-peptid-ekspressionsbibliotek
ATE367439T1 (de) Expressionsklonierung in filamentösen pilzen
ATE361996T1 (de) Methoden und zusammensetzungen zur vervielfältigung von rna sequenzen
WO2002006510A3 (en) Photoselection of nucleic acid ligands
DK0859841T3 (da) Protein/(poly)peptidbiblioteker
ATE272110T1 (de) Isolierung von nukleinsäuren
WO2001083732A3 (en) Databases of regulatory sequences; methods of making and using same
AU7381098A (en) Polypeptides having prolyl pipeptidyl aminopeptidase activity and nucleic acids encoding same
WO2003029458A3 (de) Verfahren zur herstellung von protein-bibliotheken und zur selektion von proteinen daraus
WO2002062999A8 (en) Proteins and nucleic acids encoding same
DK1299532T3 (da) Forbedrende kombinatoriske biblioteker ved rekombination i gær og analysefremgangsmåder
EA200200035A1 (ru) Высокопроизводительный скрининг экспрессионных библиотек днк в гифомицетах
WO2005010023A3 (en) Method for prediction of an epitope
ATE369442T1 (de) In vitro evolution von nukleinsäuren und kodierten polypeptiden
EP1444362A4 (en) HIGH-THROUGHPUT TRANSCRIPTOMES AND FUNCTIONAL VALIDATION ANALYSIS
ATE288589T1 (de) Verfahren zur analyse von proteinen
DE60036794D1 (de) Proteomabbau
WO2003050265A3 (en) Compositions and methods for normalizing assays
ATE334211T1 (de) Verfahren zum screening von antimykotisch wirkenden substanzen
WO2003004702A3 (en) Method for determining chromatin structure
WO2004009847A3 (en) Functional screening method involving protein translocation/redistribution
WO2002057495A3 (en) A modeling framework for predicting the number, type, and distribution of crossovers in directed evolution experiments
ATE437243T1 (de) Verfahren zum nachweis von norwalk-ähnlichem virus (gii)
ATE343645T1 (de) Verbinden einer gensequenz mit einer genfunktion mittels dreidimensionaler (3d) proteinstrukturbestimmung
JP2003275000A5 (da)