DE60213783D1 - Verfahren zur abschätzung des diplotyps aus dem genotyp eines individuums - Google Patents

Verfahren zur abschätzung des diplotyps aus dem genotyp eines individuums

Info

Publication number
DE60213783D1
DE60213783D1 DE60213783T DE60213783T DE60213783D1 DE 60213783 D1 DE60213783 D1 DE 60213783D1 DE 60213783 T DE60213783 T DE 60213783T DE 60213783 T DE60213783 T DE 60213783T DE 60213783 D1 DE60213783 D1 DE 60213783D1
Authority
DE
Germany
Prior art keywords
diplotype
individual
genotyp
assessing
inferred
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Lifetime
Application number
DE60213783T
Other languages
English (en)
Inventor
Naoyuki Kamatani
Yutaka Kitamura
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Hubit Genomix Inc
StaGen Co Ltd
Original Assignee
Hubit Genomix Inc
StaGen Co Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Hubit Genomix Inc, StaGen Co Ltd filed Critical Hubit Genomix Inc
Application granted granted Critical
Publication of DE60213783D1 publication Critical patent/DE60213783D1/de
Anticipated expiration legal-status Critical
Expired - Lifetime legal-status Critical Current

Links

Classifications

    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/40Population genetics; Linkage disequilibrium
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Biophysics (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • Molecular Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Chemical & Material Sciences (AREA)
  • Physiology (AREA)
  • Epidemiology (AREA)
  • Artificial Intelligence (AREA)
  • Bioethics (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Data Mining & Analysis (AREA)
  • Databases & Information Systems (AREA)
  • Ecology (AREA)
  • Evolutionary Computation (AREA)
  • Public Health (AREA)
  • Software Systems (AREA)
  • Complex Calculations (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Maintenance And Management Of Digital Transmission (AREA)
  • Testing, Inspecting, Measuring Of Stereoscopic Televisions And Televisions (AREA)
DE60213783T 2001-04-19 2002-04-16 Verfahren zur abschätzung des diplotyps aus dem genotyp eines individuums Expired - Lifetime DE60213783D1 (de)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
JP2001121641 2001-04-19
PCT/JP2002/003770 WO2002086161A1 (fr) 2001-04-19 2002-04-16 Procede permettant d'evaluer le diplotype du genotype d'un individu

Publications (1)

Publication Number Publication Date
DE60213783D1 true DE60213783D1 (de) 2006-09-21

Family

ID=18971470

Family Applications (1)

Application Number Title Priority Date Filing Date
DE60213783T Expired - Lifetime DE60213783D1 (de) 2001-04-19 2002-04-16 Verfahren zur abschätzung des diplotyps aus dem genotyp eines individuums

Country Status (5)

Country Link
EP (1) EP1386973B1 (de)
JP (1) JPWO2002086161A1 (de)
AT (1) ATE335851T1 (de)
DE (1) DE60213783D1 (de)
WO (1) WO2002086161A1 (de)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR100561854B1 (ko) 2003-12-16 2006-03-16 삼성전자주식회사 해플로타입 데이터의 저장, 이를 위한 정렬 방법 및 이에따른 검색 방법
JP2006293481A (ja) * 2005-04-06 2006-10-26 Hitachi Software Eng Co Ltd 遺伝子データ解析方法プログラム
CN103146820B (zh) * 2013-02-22 2014-07-02 公安部物证鉴定中心 一种推断未知来源个体汉、藏、维群体来源的方法和***
US20200265920A1 (en) * 2016-01-07 2020-08-20 The Children's Mercy Hospital A system for determining diplotypes
BR112018075407A2 (pt) * 2016-06-07 2019-03-19 Illumina, Inc. plataforma de análise genômica para executar uma segmentação de análise de sequência

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
PT1071710E (pt) * 1998-04-15 2007-01-31 Serono Genetics Inst Sa Sequência genómica da proteína activadora da 5- lipoxigenase ( flap), seus marcadores polimórficos e métodos para a detecção de asma
EP1290613A1 (de) * 2000-04-18 2003-03-12 Genaissance Pharmaceuticals, Inc. Verfahren und system zur bestimmung von haplotypen aus einer ansammlung von polymorphismen
US20020077775A1 (en) * 2000-05-25 2002-06-20 Schork Nicholas J. Methods of DNA marker-based genetic analysis using estimated haplotype frequencies and uses thereof

Also Published As

Publication number Publication date
WO2002086161A1 (fr) 2002-10-31
EP1386973A4 (de) 2004-09-08
EP1386973B1 (de) 2006-08-09
ATE335851T1 (de) 2006-09-15
JPWO2002086161A1 (ja) 2004-08-12
EP1386973A1 (de) 2004-02-04

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