CN106676110A - Small interfering ribonucleic acid (siRNA) of long noncoding RNA (lncRNA) ABHD11-AS1 related to ovarian cancer and endometrial cancer, and application of siRNA - Google Patents

Small interfering ribonucleic acid (siRNA) of long noncoding RNA (lncRNA) ABHD11-AS1 related to ovarian cancer and endometrial cancer, and application of siRNA Download PDF

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CN106676110A
CN106676110A CN201710089021.9A CN201710089021A CN106676110A CN 106676110 A CN106676110 A CN 106676110A CN 201710089021 A CN201710089021 A CN 201710089021A CN 106676110 A CN106676110 A CN 106676110A
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abhd11
sirna
ovarian cancer
lncrna
endometrial
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赵杨
宗志红
陈说
伍丹丹
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First Hospital of China Medical University
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Abstract

The invention belongs to the field of oncomolecularbiology, and in particular relates to small interfering ribonucleic acid (siRNA) of long noncoding RNA (lncRNA) ABHD11-AS1 related to ovarian cancer and endometrial cancer, and application of the siRNA. The nucleotide sequences of sense and antisense of the siRNA are respectively GCUACGAGAUCAUGAGCCA and UGGCUCAUGAUCUCGUAGC. The lncRNA is associated with the proliferation and apoptosis abilities of cancer cells, so that the siRNA designed for the lncRNA can be used for preparing medicines for resisting the ovarian cancer and the endometrial cancer.

Description

A kind of long-chain non-coding RNA ABHD11- related to ovarian cancer and carcinoma of endometrium The siRNA of AS1 and application
Technical field
The invention belongs to oncomolecularbiology field, more particularly to a kind of length related to ovarian cancer and carcinoma of endometrium The siRNA of chain non-coding RNA ABHD11-AS1 and application.
Background technology
Ovarian cancer and carcinoma of endometrium are all one of modal malignant tumor of women, and sickness rate is high, in recent years in rising Trend, seriously threatens the life and health of China women.Early screening is with timely diagnosis and treatment to ovarian cancer and endometrial carcinoma Prognosis and curative effect it is most important.It is presently used for the methods for screening and diagnosis index of clinic(Such as CA125)It is still undesirable.
In recent years, long-chain non-coding RNA(long noncoding RNA, lncRNA)Generation, invasion and attack in tumor, turn Move and the effect in drug resistance, become the study hotspot of pharmaceuticals industry.Long-chain non-coding RNA is a class length more than 200 nucleoside Acid and the not RNA molecule of coded protein, can be expressed by number of ways and molecular mechanism controlling gene, participate in various biologies Learn function.The expression of lncRNA and dysregulation are closely related with many malignant tumor, and it is in cell propagation, differentiation and apoptosis Important function be also gradually proved.With deepening continuously to lncRNA functional studies, lncRNA and tumorigenesis The research of relation, also achieves the achievement for attracting people's attention.
However, ovarian cancer, the molecular mechanism of endometrium carcinogenesis are unclear, further investigation ovarian cancer, endometrium The unconventionality expression mechanism of cancer associated gene, it will help its early diagnosis, prevention and treatment, has great importance.
The content of the invention
For the problems referred to above, the present invention provides a kind of long-chain non-coding RNA related to ovarian cancer and carcinoma of endometrium The siRNA of ABHD11-AS1 and application.The long-chain non-coding RNA is related to the propagation of cancerous cell, apoptosis capacity, for its design SiRNA can be applicable to the preparation of anti-tumor drug.
To achieve these goals, the present invention provides a kind of long-chain non-coding related to ovarian cancer and carcinoma of endometrium RNA ABHD11-AS1, its DNA sequence is as shown in SEQ.ID. NO.1;For the siRNA of the long-chain non-coding RNA design, institute The nucleotide sequence of the sense and antisense of the siRNA for stating is respectively as shown in SEQ.ID.NO.2 and SEQ.ID.NO.3.
SEQ.ID.NO.2 : GCUACGAGAUCAUGAGCCA.
SEQ.ID.NO.3 : UGGCUCAUGAUCUCGUAGC.
The siRNA of the described long non-coding RNA related to ovarian cancer and carcinoma of endometrium can be used for preparing anti-ovary Cancer and endometrial cancer drug.
Beneficial effects of the present invention.
Present invention firstly discovers that expression of the LncRNA ABHD11-AS1 in ovarian cancer and endometrial carcinoma is above Normal ovarian tissue and endometrial tissue;LncRNA ABHD11-AS1 abnormal expressions and ovarian cancer, the generation of carcinoma of endometrium It is that the clinical treatment of the LncRNA of ovarian cancer and carcinoma of endometrium and scientific research provide the foundation with the dependency of development.
The LncRNA related to ovarian cancer and carcinoma of endometrium that the present invention is provided, is only by Shanghai SIGMA biotech firms The Rosetta algorithms of family, it is ensured that design siRNA sequence on efficient Specific basal during gene design;Its plasmid sequence is by reviving Zhou Jima genes limited company designs.Respectively plasmid vector and si-RNA interference fragments are transfected into into ovarian cancer cell line In A2780, OVCAR3 and Endometrial carcinoma cell line HEC-1B, Ishikawa, find tumor cell proliferation activity rise/under Drop, it is taken as that the function of the gene is related to the multiplication capacity of cancerous cell.
Description of the drawings
Fig. 1 detects expressions of the ABHD11-AS1 in ovarian cancer and normal structure using qRT-PCR.
Fig. 2 detects ABHD11-AS1 overexpression/impact of the interference to human epithelial ovarian carcinoma cells proliferation using mtt assay.
Fig. 3 detects ABHD11-AS1 overexpression/impact of the interference to ovarian cellular apoptosis.
Fig. 4 detects the expression feelings in ABHD11-AS1 Endometrial Carcinomas and normal endometrial tissue using qRT-PCR Condition.
Fig. 5 detects the impact that ABHD11-AS1 overexpression/interference is bred to endometrial carcinoma cell using mtt assay.
Fig. 6 detects ABHD11-AS1 overexpression/impact of the interference to endometrial carcinoma cell apoptosis.
Specific embodiment
With reference to specific embodiment, the present invention is described further.Following examples will be helpful to the present invention's Understand, but these embodiments, only for being illustrated to the present invention, the present invention is not limited to these contents.Do not make in embodiment The operational approach of specified otherwise is the art conventional practices.
Embodiment 1.
First, Lnc RNA ABHD11-AS1 are in ovarian cancer tissue, normal ovarian tissue and endometrial, normal-sub The in utero expression in membrane tissue.
1st, collection of specimens.
In the case where patient knows the inside story, ovarian cancer, normal ovarian tissue and endometrial, normal is gathered in Rhizoma Atractylodis Macrocephalae Endometrial tissue specimen, it is standby in being stored in liquid nitrogen or -80 DEG C of ultra cold storage freezers after normal saline cleaning;Tissue specimen in In June, -2016 in June, 2014, in No. 1 Hospital Affiliated to Chinese Medical Univ operating room, gathered by Chen doctor.
2nd, design of primers.
PCR detects the primer.
Forward primer(SEQ.ID.NO.4):CTCCACCTGACAGCAACATC.
Downstream primer(SEQ.ID.NO.5):TTCTTGGCAATGGCTTCA.
3rd, detect ABHD11-AS1 in ovarian cancer, normal ovarian tissue and carcinoma of endometrium respectively using qRT-PCR methods Tissue, the expression of normal endometrial tissue.
3.1st, the tissue specimen Total RNAs extraction collected.
Normal ovarian tissue, ovarian cancer tissue and normal endometrial tissue, endometrial tissue specimen will be collected to use Trizol soaks, in case extracting total serum IgE;The chloroform of Trizol1/5 volumes is added, acutely vibration 15 seconds, treat that solution is fully newborn After change, 5 minutes are stored at room temperature;Under the conditions of 4 DEG C, 12,000g centrifugal treating 20 minutes, it is new that Aspirate supernatant is transferred to another In centrifuge tube, isopyknic isopropanol is added in supernatant, after the centrifuge tube that turns upside down fully is mixed, at 30 DEG C 10 are stood Minute;Under the conditions of 4 DEG C, 12,000g centrifugal treating 20 minutes, supernatant discarded adds the 75% of lml ethanol along tube wall, up and down Reverse washing centrifuge tube tube wall, 12,000g centrifugal treating discards ethanol, drying at room temperature precipitation 5-10 after 10 minutes under the conditions of 4 DEG C Minute, add appropriate(10-20ul)RNase-free water dissolutioies precipitation after, with UV-2800A type ultraviolet-uisible spectrophotometers Determine RNA concentration and purity(Quantitative RNA concentration 1ug/ul, represents that RNA purity is higher between OD260/OD280 1.8-2.0).
3.2nd, reverse transcription synthesis cDNA.
Using Promega GoScript reverse transcription systems(A5000、A5001), inverted according to following operating procedure The cDNA that record is obtained.
The first step:Take a certain amount of template ribonucleic acid and add primer.
RNA ( 1µg/ul) 5 μl。
Random Primers (0.5 µg /ul) 1 μl。
Oligo(dT)15 Primer (0.5 µg/ul) 1 μl。
The μ l of Nuclease-Free Water (adding to 10 μ l) 3.
Second step:By template ribonucleic acid and reverse transcription primer(Random Primers and Oligo (dT) 15 Primer)'s Mixture carries out 70 DEG C, 5 min denaturations, after the completion of take out and be placed on ice.
3rd step:RT-Mix is prepared, to each sample cell 10 μ l are added.
Component reverse transcription mixed liquor final concentration.
Nuclease-Free Water 1.6 μl。
GoScript™ 5X Reaction Buffer 4 μl 1X 。
MgCl2 (25 mM) 2 μl 2.5mM 。
PCR Nucleotide Mix 1 μl 0.5mM 。
Recombinant RNasin® Ribonuclease Inhibitor 0.4 μl 20units。
GoScript™ Reverse Transcriptase 1 μl。
4th step:Reverse transcription program, including annealing, extension, reverse transcriptase three steps of inactivation are set(25 DEG C of 5min of annealing, prolong 42 DEG C of 60 min is stretched, 70 DEG C of 15 min, 4 DEG C of+∞ is inactivated.CDNA is obtained after the completion of program.
3.3、Real-time PCR。
(1)By following configuration PCR reaction mixtures(Reactant liquor configuration can be carried out in room temperature), and point to each reaction tube, so 2ul templates are added afterwards.
Volume components(20ul reaction systems)Final concentration.
Nuclease-Free Water 7 μl 。
Forward primer(10 uM) 0.4ul 0.2uM.
Downstream primer(10 uM) 0.4ul 0.2uM.
GoTaq®qPCR Master Mix,2X 10ul 1X。
CXR 100X 0.2ul 1X。
(2)Using the Real-Time PCR System of ABI PRISM 7500, two-step method enters performing PCR standard amplification journey Sequence.
(3)Data are derived, Realtime PCR results are analyzed with 2- △ △ CT methods.It is soft using Graphad Prism Part draws out respectively the chart of ovarian cancer and normal ovarian tissue, carcinoma of endometrium and normal endometrial tissue expression, As a result such as Fig. 1-3 and Fig. 4;Wherein Fig. 1-1 represents lncRNA ABHD11-AS1 expression in ovarian epithelial carcinoma than in normal ovum It is significant higher in nest tissue;1-2 represents lncRNA ABHD11-AS1 expression and is proportionate neoplasm staging(Produced according to international woman Scietific federation(FIGO)Staging System I/II phases and III/IV phases), 1-3 represents lncRNA ABHD11-AS1 in differentiated journey Degree group is low compared with low/medium degree differentiation group,*P <0.05;Fig. 4 is represented and compared in lncRNA ABHD11-AS1 expression Endometrial Carcinomas It is significant in normal endometrial tissue to increase.
LncRNA ABHD11-AS1 described above are related to ovarian cancer, endometrium carcinogenesis, development.
2nd, cell in vitro functional experiment.
1st, Ovarian Cancer Cells A2780, OVCAR3 is purchased from Chinese Academy of Sciences's cell bank, and Endometrial carcinoma cell line HEC-1B is purchased from Chinese Academy of Sciences's cell bank, cell culture medium DMEM/RPMI 1640 and hyclone are purchased from HyClone companies, ABHD11-AS1 matter Grain expression vector is purchased from Suzhou Ji Ma Technology Co., Ltd., and siRNA interference fragments sequence is synthesized by Shanghai SIGMA biotech firms, RNA extraction agent RNAiso Plus are purchased from precious biological engineering company limited, Reverse Transcriptase kit High Capacity cDNA Reverse Transcription Kits are purchased from Invitrogen companies, quantitative PCR kit Power SYBR Green PCR Master Mix are purchased from Invitrogen companies, and ABHD11-AS1 genes and house-keeping gene 18S primers are by Shanghai life work life Thing engineering services company limited synthesizes.
1.1st, cell culture:Ovarian cancer and the endometrial carcinoma cell hyclone cell culture medium for containing 10%, in 37 DEG C, 5%CO2Incubator in cultivate, using ABHD11-AS1 gene RNAs interference and overexpression plasmid transfection ovarian cancer cell line A2780, OVCAR3 and Endometrial carcinoma cell line HEC-1B, according to lipo2000 description respectively by ABHD11-AS1's SiRNA and ABHD11-AS1 plasmids are proceeded in cell, are cultivated.
2nd, Guo Biao Da ∕ jamming effectivenesss detection:Transfection efficiency result using QRT-PCR detect, jamming effectiveness more than 50%, Overexpression efficiency is more than 5 times.
2.1st, cross table carries out cell proliferation experiment up to after ∕ interference ABHD11-AS1(MTT).
Proliferation experiment:Choose ABHD11-AS1 Guo Biao Da ∕ interference in cell line and, as experimental group, transfect the cell of empty carrier As a control group, cell counting is carried out, by cell kind to 96 orifice plates, often 3000, hole cell, plus 100ul culture fluid is distinguished It is little in 37 DEG C of incubations 4 after adding within 24,48,72 hours the mg/mL MTT Solution Cells incubators of 20ul 5 incubation 2-4 hours in 0 When, supernatant is discarded, 150ul DMSO are added, OD values are surveyed under 490nm using spectrophotometer, disposal data is depicted as folding Line chart, is shown in Fig. 2 and Fig. 5.
2.1.1, the ovarian cancer cell line and Endometrial carcinoma cell line cell proliferation experiment after overexpression ABHD11-AS1 As a result, Fig. 2-1 to Fig. 2-4 and Fig. 5-1 is seen;Wherein Fig. 2-1 to Fig. 2-2 is represented in ovarian cancer A2780 and OVCAR3 cell transfers Dye ABHD11-AS1 plasmids, its expression is raised;Fig. 2-3 to Fig. 2-4 represents that ABHD11-AS1 expression is raised, ability of cell proliferation Significantly increase;Wherein Fig. 5-1 represents the expression that transfection ABHD11-AS1 plasmids are improved in its Endometrial Carcinomas cell.
It can be seen that, after overexpression ABHD11-AS1 genes, ovarian cancer and endometrial carcinoma cell multiplication capacity strengthen.
2.1.2, the ovarian cancer cell line and endometrial carcinoma cell cell proliferation experiment result after ABHD11-AS1 interference Fig. 2-5 to 2-8 and Fig. 5-2 is seen to Fig. 5-4, wherein Fig. 2-5 to Fig. 2-6 represents ovarian cancer cell line transfection si-ABHD11-AS1 Reduce its expression;Fig. 2-7 to Fig. 2-8 represents silence ABHD11-AS1, and cell proliferation ability is decreased obviously;Fig. 5-2 is represented and utilized SiRNA can be in silence its Endometrial Carcinomas cell expression;Fig. 5-3 represents that ABHD11-AS1 expression increases, cell propagation Ability is significantly improved;Fig. 5-4 represents silence expression, and ability of cell proliferation is suppressed.
It can be seen that, interference is fallen after ABHD11-AS1 genes, and ovarian cancer and endometrial carcinoma cell multiplication capacity decline.
2.2nd, cell apoptosis assay after Gan Rao ∕ overexpression ABHD11-AS1.
By cell in 6cm disk cultures before experiment, (ABHD11-AS1 gene RNAs are disturbed or overexpression matter to add process factor Grain) transfection 48 hours after, tested.Cell is collected with EDTA trypsinizations, 1500r centrifugal treating is not contained after 5 minutes Cell, the PBS of pre-cooling is washed twice, and after centrifugation, collects cell about 5 × 10 5It is individual, 1 × Binding Buffer are added, it is resuspended thin Born of the same parents 100ul, adds 5 μ L Annexin V-FITC and 5uL PI Staining Solution (interference) or 5 μ L Annexin V-7AAD and 5uL PE Staining Solution(Height expression), gently mixing, room temperature lucifuge is incubated 10 minutes, adds 400 μ L 1 × Binding Buffer, gently mix;Sample was detected in 1 hour in-flow cell instrument.
2.2.1, the ovarian cancer cell line and Endometrial carcinoma cell line cell apoptosis assay after overexpression ABHD11-AS1 As a result see Fig. 3-1 to 3-2 and Fig. 6-1;Wherein Fig. 3-1 to Fig. 3-2 represents that ABHD11-AS1 expression rises, ovarian cellular apoptosis Ratio is decreased obviously;Fig. 6-1 represents in Endometrial Carcinomas cell line that ABHD11-AS1 expression is raised, and apoptosis ratio is bright It is aobvious to decline.
It can be seen that, after overexpression ABHD11-AS1 genes, ovarian cancer and endometrial carcinoma cell apoptosis capacity weaken.
2.1.2, the ovarian cancer cell line and Endometrial carcinoma cell line apoptosis experimental result after ABHD11-AS1 interference is shown in Fig. 3-3 to 3-4 and Fig. 6-2;Wherein Fig. 3-3 to Fig. 3-4 represents that using the expression of siRNA silences ABHD11-AS1 ovarian cancer is thin Born of the same parents system apoptosis rate increases notable;Fig. 6-2 represents that silence ABHD11-AS1 remarkably promotes endometrial carcinoma cell apoptosis.
It can be seen that, interference is fallen after ABHD11-AS1 genes, and ovarian cancer and endometrial carcinoma cell apoptosis capacity increase.
Sequence table
The > No. 1 Hospital Affiliated to Chinese Medical Univ of < 110
A kind of siRNA of long-chain non-coding RNA ABHD11-AS1s related to ovarian cancer and carcinoma of endometrium of the > of < 120 and should With
The > 5 of < 160
The > 1 of < 210
The > 1660 of < 211
The > DNA of < 212
The nucleotide sequence of the > long-chain non-coding RNA ABHD11-AS1 of < 213
The > 1 of < 400
ctcgagtgaa gacggaaatg gggcggggct gcgagctagg gcgggagaag gagcgcgggg aggacgtacc 70
ttgtgagatg cgagccggcc aacagcttgc aagcatgctc cgctggaccc gagcctggag gctcccgcgt 140
gagggactcg gcccccacgg ccctagcttc gcgagggtgc ctgtcgcacc cagcagcagc agcggcggcc 210
gagggggcgc cgagccgagg ccgcttccgc tttcctacag gcttctggac ggggaggcag ccctcccggc 280
cgtcgtcttt ttgcagggct cttcggcagc aaaactaact tcaactccat cgccaagatc ttggcccagc 350
agacaggccg tgctgacggt ggatgctcgt aaccacggtg acagccccca cagcccagac atgagctacg 420
agatcatgag ccaggacctg caggaccttc tgccccagct gggcctggtg ccctgcgtcg tcgttggcca 490
cagcatggga ggaaagacag ccatgctgct ggcactacag agggtgagcc gcccatgtct ggggcctcct 560
cccattcagt atataccctg agggccctgc aggcaacctg ggactcacat gatcgttgga tgaccaagtt 630
caggctccag gagccatgcc tgagactccc tatgtctgcc taagactggt cccagttcgg ttctctccca 700
cagccagagc tggtggaacg tctcattgct gtagatatca gcccagtgga aagcacaggt gtctcccact 770
ttgcaaccta tgtggcagcc atgagggcca tcaacatcgc agatgagctg ccccgctccc gtgcccgaaa 840
actggcggat gaacagctca gttctgtcat ccaggacatg gccgtgcggc agcacctgct cactaacctg 910
gtagaggtag acgggcgctt cgtgtggagg gtgaacttgg atgccctgac ccagcaccta gacaagatct 980
tggctttccc acagaggcag gagtcctacc tcgggccaac actctttctc cttggtggaa actcccagtt 1050
cgtgcatccc agccaccacc ctgagattat gcggctcttc cctcgggccc agatgcagac ggtgccgaac 1120
gctggccact ggatccacgc tgaccgccca caggacttca tagctgccat ccgaggcttc ctggtctaag 1190
agttgctggc aagaagatgg ccgggcgtgg tggctcatgc ctgtaattcc agcactttgg gaggctaagg 1260
cgggaggatg acttgaggcc aggagttgga gaccagcctg gccaacatgg tgaaaccctg tctctactaa 1330
aaatacaaaa attagcctgg cgtggtggtg cacacctgta atcccagcta ctctggaggc tgaggcagga 1400
gaatcacttg aaccctggag gcagaggttg caatgagccg agatcacacc actacactcc agcctaggca 1470
acagagcaag actctgtctc aaaaaaaaca aaacaaaaag gaggcacaaa accccaggct tcaagtctct 1540
gcagcctgct ccacatttgg gcacagaagg actcagacag gcactgtgtg ggcacgaggt tttacagggg 1610
tggtcagacc tcaggcttta atgaataaag acactactcc caaaggtacc 1660
The > 2 of < 210
The > 19 of < 211
The > RNA of < 212
The > outer primer sense of < 213
The > 2 of < 400
gcuacgagau caugagcca 19
The > 3 of < 210
The > 19 of < 211
The > RNA of < 212
The > outer primer antisense of < 213
The > 3 of < 400
uggcucauga ucucguagc 19
The > 4 of < 210
The > 20 of < 211
The > DNA of < 212
The > artificial sequences of < 213
The > 4 of < 400
ctccacctga cagcaacatc 20
The > 5 of < 210
The > 18 of < 211
The > DNA of < 212
The > artificial sequences of < 213
The > 5 of < 400
ttcttggcaa tggcttca 18

Claims (4)

1. a kind of siRNA of the long-chain non-coding RNA ABHD11-AS1 related to ovarian cancer and carcinoma of endometrium, its feature exists In the nucleotide sequence of the sense and antisense of described siRNA is respectively such as SEQ.ID.NO.2 and SEQ.ID.NO.3 institutes Show:
SEQ.ID.NO.2 : GCUACGAGAUCAUGAGCCA;
SEQ.ID.NO.3 : UGGCUCAUGAUCUCGUAGC.
2. the siRNA of long-chain non-coding RNA ABHD11-AS1 as claimed in claim 1, it is characterised in that apply qRT-PCR Method detects respectively ABHD11-AS1 in ovarian cancer, normal ovarian tissue and endometrial, normal endometrial tissue Expression.
3. the siRNA of long-chain non-coding RNA ABHD11-AS1 as claimed in claim 1, it is characterised in that described qRT- PCR method detection primer nucleotide sequences used are respectively:Forward primer(SEQ.ID.NO.4): CTCCACCTGACAGCAACATC;Downstream primer(SEQ.ID.NO.5):TTCTTGGCAATGGCTTCA.
4. the siRNA of long-chain non-coding RNA ABHD11-AS1 as claimed in claim 1 is used to prepare ovarian cancer resistance and uterus Inner membrance cancer drug.
CN201710089021.9A 2017-02-20 2017-02-20 The siRNA of long-chain non-coding RNA ABHD11-AS1 relevant to oophoroma and carcinoma of endometrium a kind of and application Expired - Fee Related CN106676110B (en)

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