AU2002312588A1 - Methods of using nick translate libraries for snp analysis - Google Patents

Methods of using nick translate libraries for snp analysis

Info

Publication number
AU2002312588A1
AU2002312588A1 AU2002312588A AU2002312588A AU2002312588A1 AU 2002312588 A1 AU2002312588 A1 AU 2002312588A1 AU 2002312588 A AU2002312588 A AU 2002312588A AU 2002312588 A AU2002312588 A AU 2002312588A AU 2002312588 A1 AU2002312588 A1 AU 2002312588A1
Authority
AU
Australia
Prior art keywords
methods
snp analysis
nick translate
libraries
translate libraries
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2002312588A
Inventor
John P. Langmore
Vladimir L. Makarov
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Rubicon Genomics Inc
Original Assignee
Rubicon Genomics Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Rubicon Genomics Inc filed Critical Rubicon Genomics Inc
Publication of AU2002312588A1 publication Critical patent/AU2002312588A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6858—Allele-specific amplification
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/686—Polymerase chain reaction [PCR]
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C12Q1/683—Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]
AU2002312588A 2001-06-29 2002-06-25 Methods of using nick translate libraries for snp analysis Abandoned AU2002312588A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US30217201P 2001-06-29 2001-06-29
US60/302,172 2001-06-29
PCT/US2002/020200 WO2003002752A2 (en) 2001-06-29 2002-06-25 Methods of using nick translate libraries for snp analysis

Publications (1)

Publication Number Publication Date
AU2002312588A1 true AU2002312588A1 (en) 2003-03-03

Family

ID=23166575

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2002312588A Abandoned AU2002312588A1 (en) 2001-06-29 2002-06-25 Methods of using nick translate libraries for snp analysis

Country Status (3)

Country Link
US (1) US20040197791A1 (en)
AU (1) AU2002312588A1 (en)
WO (1) WO2003002752A2 (en)

Families Citing this family (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR101038137B1 (en) * 2002-06-28 2011-05-31 프리메라디엑스, 인크. Methods of detecting sequence differences
ES2382780T3 (en) 2003-10-21 2012-06-13 Orion Genomics, Llc Procedures for quantitative determination of methylation density in a DNA locus
US7664748B2 (en) * 2004-07-12 2010-02-16 John Eric Harrity Systems and methods for changing symbol sequences in documents
GB0523276D0 (en) * 2005-11-15 2005-12-21 London Bridge Fertility Chromosomal analysis by molecular karyotyping
JP2009529876A (en) * 2006-03-14 2009-08-27 ゲニゾン バイオサイエンシス インコーポレイテッド Methods and means for sequencing nucleic acids
US9631227B2 (en) * 2009-07-06 2017-04-25 Trilink Biotechnologies, Inc. Chemically modified ligase cofactors, donors and acceptors
CA2905410A1 (en) * 2013-03-15 2014-09-25 Abbott Molecular Inc. Systems and methods for detection of genomic copy number changes
CA2936564C (en) * 2014-01-07 2022-10-18 Fundacio Privada Institut De Medicina Predictiva I Personalitzada Del Cancer Methods for generating double stranded dna libraries and sequencing methods for the identification of methylated cytosines
JP7164978B2 (en) * 2018-06-29 2022-11-02 キヤノン株式会社 Particle measurement method, particle measurement device and nucleic acid concentration measurement system

Family Cites Families (19)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4710465A (en) * 1984-04-19 1987-12-01 Yale University Junction-fragment DNA probes and probe clusters
US5149625A (en) * 1987-08-11 1992-09-22 President And Fellows Of Harvard College Multiplex analysis of DNA
US4942124A (en) * 1987-08-11 1990-07-17 President And Fellows Of Harvard College Multiplex sequencing
CA2036946C (en) * 1990-04-06 2001-10-16 Kenneth V. Deugau Indexing linkers
US5197557A (en) * 1991-12-10 1993-03-30 Yanh Li Hsiang Electronic weighing scale
DE4218152A1 (en) * 1992-06-02 1993-12-09 Boehringer Mannheim Gmbh Simultaneous sequencing of nucleic acids
US5518901A (en) * 1993-04-19 1996-05-21 Murtagh; James J. Methods for adapting nucleic acid for detection, sequencing, and cloning using exonuclease
US5648213A (en) * 1994-08-30 1997-07-15 Beckman Instruments, Inc. Compositions and methods for use in detection of analytes
US5695971A (en) * 1995-04-07 1997-12-09 Amresco Phage-cosmid hybrid vector, open cos DNA fragments, their method of use, and process of production
US6218119B1 (en) * 1996-01-16 2001-04-17 Keygene, N. V. Amplification of simple sequence repeats
WO1997035026A1 (en) * 1996-03-18 1997-09-25 Molecular Biology Resources, Inc. Target nucleic acid sequence amplification
US5858671A (en) * 1996-11-01 1999-01-12 The University Of Iowa Research Foundation Iterative and regenerative DNA sequencing method
US6197557B1 (en) * 1997-03-05 2001-03-06 The Regents Of The University Of Michigan Compositions and methods for analysis of nucleic acids
US6117634A (en) * 1997-03-05 2000-09-12 The Reagents Of The University Of Michigan Nucleic acid sequencing and mapping
US6124120A (en) * 1997-10-08 2000-09-26 Yale University Multiple displacement amplification
EP0976835B1 (en) * 1998-07-29 2003-07-09 Keygene N.V. Method for detecting nucleic acid methylation using AFLPTM
NO986133D0 (en) * 1998-12-23 1998-12-23 Preben Lexow Method of DNA Sequencing
US20020102577A1 (en) * 2000-07-31 2002-08-01 Raillard Sun Ai Nucleotide incorporating enzymes
US6777187B2 (en) * 2001-05-02 2004-08-17 Rubicon Genomics, Inc. Genome walking by selective amplification of nick-translate DNA library and amplification from complex mixtures of templates

Also Published As

Publication number Publication date
WO2003002752A3 (en) 2003-03-06
US20040197791A1 (en) 2004-10-07
WO2003002752A2 (en) 2003-01-09

Similar Documents

Publication Publication Date Title
AU785425C (en) Methods of genomic analysis
GB0127553D0 (en) Provision of data for analysis
AU2001234608A1 (en) Methods for analysis of gene expression
AU2002303584A1 (en) Method for identifying comparable instruments
AU2002332940A1 (en) Device for analyzing nucleic acid
AU2002249116A1 (en) Gene library for screening methods
AU2002322518A1 (en) Methods for preparing nucleic acid samples
AU2001236757A1 (en) Method for analysis of reaction products
AU2002312588A1 (en) Methods of using nick translate libraries for snp analysis
AU2002333497A1 (en) Thermo-optical analysis system for biochemical reactions
AU2002364749A1 (en) Method for protein expression analysis
AU2002259216A1 (en) Analysis apparatus for genetic data
AU2003303869A1 (en) Methods for nucleic acid analysis
AU2002323532A1 (en) An advanced method for profile analysis of continuous data
AU2003219362A1 (en) Chemical analysis of samples
AU2001265759A1 (en) Method for the highly parallel analysis of polymorphisms
AU2002351532A1 (en) Method of sampling
AU2002342341A1 (en) Methods of data analysis using ranks
AU2002256484A1 (en) Family-based association tests for quantitative traits using pooled dna
AU2002213695A1 (en) Method of genomic analysis
AU2002354255A1 (en) Mtehod of analyzing gene expression
AU2002358532A1 (en) Method for analyzing translation-controlled gene expression
AU2001286722A1 (en) Methods for reducing complexity of nucleic acid samples
AU2002352230A1 (en) Provision of data for analysis
AU2002233554A1 (en) Methods for analysis of rna

Legal Events

Date Code Title Description
MK6 Application lapsed section 142(2)(f)/reg. 8.3(3) - pct applic. not entering national phase