WO2020003272A1 - An improved process for the preparation of venetoclax - Google Patents

An improved process for the preparation of venetoclax Download PDF

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WO2020003272A1
WO2020003272A1 PCT/IB2019/055578 IB2019055578W WO2020003272A1 WO 2020003272 A1 WO2020003272 A1 WO 2020003272A1 IB 2019055578 W IB2019055578 W IB 2019055578W WO 2020003272 A1 WO2020003272 A1 WO 2020003272A1
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formula
compound
acid
process according
salt
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PCT/IB2019/055578
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WO2020003272A8 (en
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Chandan Kumar Gupta
Navdeep DHIMAN
Sunil Sanghani
Govind Singh
Saswata Lahiri
Walter Cabri
Nitin Gupta
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Fresenius Kabi Oncology Ltd.
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D471/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
    • C07D471/04Ortho-condensed systems

Definitions

  • the present invention relates to an improved process for the preparation of a compound of formula I or its salt
  • R is Ci- 4 alkyl
  • the present invention further relates to an improved process for the conversion of compound of formula I to a compound of formula V,
  • the present invention also relates to an improved process for the preparation of the compound of formula V. BACKGROUND OF THE INVENTION
  • Venetoclax 4-(4- ⁇ [2-(4-chlorophenyl)-4,4-dimethylcyclohex-l-en-l-yl]methyl ⁇ piperazin-l- yl )-A'-( ⁇ 3-nitro-4[itctrahydro-2//-pyran-4ylmcthyl)aminoJphcnyl ⁇ sulfonyl)-2-( 1 H- pyrrolo[2,3-Z>]pyridin-5-yloxy)benzamide) is represented by a compound of formula V.
  • Venetoclax (marketed under the trade name Venclexta, Abbvie Inc.) is an inhibitor of anti- apopto tic Bcl-2 proteins. It is indicated for the treatment of patients with chronic lymphocytic leukemia (CLL). Venetoclax, as represented by formula V, is disclosed in WO 2011/149492. Various processes for the preparation of venetoclax have been disclosed in literature.
  • stage- 1 a reaction of the compound of formula II with the compound of formula III is carried out in the presence of dipotassium hydrogen phosphate (K2HP04) at a temperature of 135 degree Celsius with stirring for about 24 hours.
  • K2HP04 dipotassium hydrogen phosphate
  • the compound of formula I obtained at stage- 1 is purified by silica gel chromatography. The yield is ca. 37%. Purity is not reported.
  • stage-2 the compound of formula I is hydrolysed to obtain a compound of formula la in the presence of sodium hydroxide and dioxane as a solvent.
  • stage-3 coupling of the compound of formula la with the compound of formula IV is performed in the presence of 1- ethyl-3- [3--(dimethyiamino)propyl] -carbodiimide hydrochloride (EDC-HC1) and 4-dimethylaminopyridine in dichloro me thane.
  • EDC-HC1 1- ethyl-3- [3--(dimethyiamino)propyl] -carbodiimide hydrochloride
  • 4-dimethylaminopyridine in dichloro me thane.
  • the obtained compound of formula V is purified by silica gel chromatography. The yield is ca. 32%. Purity is not reported.
  • Another process for the synthesis of the compound of formula I is disclosed in WO 2014/165044,
  • the preparation of the compound of formula I involves use of a phosphine compound and a palladium compound.
  • the reaction of a compound of formula II 1 with a compound of formula III 1 is carried out in the presence of a phosphine compound, sodium tert-butoxide and Pdidba-, at 55 to 75 degree Celsius to give the compound of formula I.
  • the compound of formula I was isolated by solvent-extractions using large volumes of solvents such as tetrahydrofuran, heptane and cyclohexane. The process also requires use of amino acids such as L-cysteine. The product was crystallized by seeding. Thereby, the process disclosed in WO 2014/165044 is quite lengthy and complicated.
  • patent applications such as CN 2014/10582048, CN 2017/1271772, WO 2017/156398 and W02018/029711 which disclose the synthesis of the compound of formula I, used in the synthesis of the compound of formula V.
  • Chinese application CN 2014/10582048 discloses the synthesis of the compound of formula I, using intermediates of formula A and B,
  • R is Ci-4 alkyl
  • the present invention relates to a process for the preparation of the compound of formula V,
  • R is C 1-4 alkyl; with a compound of formula III,
  • R is C1-4 alkyl
  • Another aspect of the present invention is to provide a process for the preparation of compound of formula I or its salts
  • R is C 1-4 alkyl; with a compound of formula III,
  • Another aspect of the present invention is to provide a compound of formula lb.
  • Another aspect of the present invention is to provide salts of the formula la represented as a compound of formula la 1 ,
  • Formula la wherein Y is hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoro acetic acid, oxalic acid, dicyclohexylamine; and to provide a process for their preparation.
  • the present invention relates to a process for the preparation of a compound of formula V,
  • Formula V comprising the steps of: a) reacting a compound of formula II,
  • R is C 1-4 alkyl
  • the Ci-4 alkyl is selected from methyl, ethyl, propyl, isopropyl, n-butyl, isobutyl and t- butyl, preferably methyl.
  • the alkylamine may be selected from the group consisting of N,N- diisopropylethylamine (DIPEA), trimethylamine (Me 3 N), triethylamine (Et 3 N), N,N- dimethylaniline (DMA), l,4-diazabicyclo[2.2.2]octane (DABCO), 1,8- Diazabicyclo[5.4.0]undec-7-ene (DBU) and l,5-Diazabicyclo [4.3.0]non-5-ene (DBN), preferably N,N-diisopropylethyl amine (DIPEA).
  • DIPEA N,N- diisopropylethylamine
  • Me 3 N trimethylamine
  • Et 3 N trie
  • the reaction is preferably carried out in the presence of an aprotic solvent selected from the group consisting of dichloromethane, dimethylsulphoxide, chloroform, acetone, acetonitrile, tetrahydrofuran, dimethylformamide, N-methyl pyrrolidine, dioxane, nitromethane, pyridine, 2-methyltetrahydrofuran and mixtures thereof.
  • an aprotic solvent selected from the group consisting of dichloromethane, dimethylsulphoxide, chloroform, acetone, acetonitrile, tetrahydrofuran, dimethylformamide, N-methyl pyrrolidine, dioxane, nitromethane, pyridine, 2-methyltetrahydrofuran and mixtures thereof.
  • DMSO dimethylsulphoxide
  • the reaction is preferably carried out at 90 to 120 degree Celsius, more preferably at 95 to 105 degree Celsius.
  • the compound of formula II, wherein R is methyl is reacted with the compound of formula III, in the presence of a suitable alkylamine such as N, N-diisopropylethylamine and a suitable solvent such as dimethylsulphoxide.
  • a suitable alkylamine such as N, N-diisopropylethylamine
  • a suitable solvent such as dimethylsulphoxide.
  • the reaction is carried out at 90 to 115 degree Celsius, more preferably at 95 to 105 degree Celsius.
  • the reaction mixture is stirred for 24-28 hours at the same temperature to obtain the compound of formula I.
  • the salt of the compound of formula I is typically prepared by reacting the compound of formula I with an acid selected from the group consisting of hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoroacetic acid and oxalic acid.
  • an acid selected from the group consisting of hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoroacetic acid and oxalic acid.
  • the salt of the compound of formula I is the hydrochloride salt.
  • the salt of the compound of formula I is preferably prepared in the presence of a solvent selected from methanol, ethanol, water, ethyl acetate, acetone and dichloromethane or a mixture thereof, more preferably methanol.
  • the salt of the compound of formula I is prepared by reacting the compound of formula I with a suitable acid such as concentrated hydrochloric acid in a suitable solvent such as methanol to give the hydrochloride salt of the compound of formula I.
  • the inventors of the present invention found that using an alkylamine such as diisopropylethyl amine (DIPEA) in the preparation of the compound of formula I, surprisingly improves the yield at the first stage and the high yield of the compound of formula I or its salts, effects the further stages of the synthesis of venetoclax and as a result venetoclax is obtained in significantly higher yield and purity without cumbersome isolation or chromatographic purifications.
  • DIPEA diisopropylethyl amine
  • the yield of the compound of formula I or a salt thereof is 60% or greater, e.g., 70% or greater, 80% or greater, or 90% or greater. In other embodiments, the yield of the compound of formula I or a salt thereof is 95% or less, e.g., 85% or less, 75% or less, or 65% or less. In yet other embodiments, the yield of the compound of formula I or a salt thereof is in a range of any of the forgoing values, e.g., 60%-95%, 60%-85%, 60%-75%, 70%-95%, 70%-85%, or 80%-95%.
  • the invention also provides the compound of formula I or a salt thereof in a highly purified form.
  • the purity of the compound of formula I or a salt thereof is 95% or greater, e.g., 97% or greater, 99.0% or greater, 99.4% or greater, or 99.8% or greater.
  • the purity of the compound of formula I or a salt thereof is 99.9% or less, e.g., 99.6% or less, 99.3% or less, 98.5% or less, or 97.5% or less.
  • the purity of the compound of formula I or a salt thereof is in a range of any of the forgoing values, e.g., 95%-99.3%, 97%-98.5%, 97 %- 99.9%, 99.0%-99.6%, 99.0%-99.9%, or 99.4%-99.9%.
  • the yield of the hydrochloride salt of the compound of formula I is 74.14% and the purity 99.3%.
  • the compound of formula I or its salts can be further converted to the compound of formula V by processes well known in the prior art.
  • the present invention relates to the conversion of the compound of formula I or its salts to the compound of formula V.
  • the compound of formula I or its salt is hydrolyzed to the compound of formula la,
  • R is Ci- 4 alkyl
  • the hydrolysis of the compound of formula I or its salts is preferably carried out in presence of a base selected from potassium hydroxide, lithium hydroxide and sodium hydroxide or a mixture thereof, preferably potassium hydroxide.
  • the compound of formula I or its salts is preferably hydrolyzed in presence of a solvent selected from methanol, ethanol, water, ethyl acetate and dichloromethane or a mixture thereof, preferably methanol.
  • the acid is preferably selected from the group consisting of hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoroacetic acid and oxalic acid, more preferably hydrochloric acid.
  • the compound of formula I or its salts is preferably hydrolyzed at a temperature of 55- 80 degree Celsius.
  • the compound of formula I or its salts is hydrolyzed in the presence of a suitable base such as aqueous potassium hydroxide and a suitable solvent such as methanol and a suitable acid such as hydrochloric acid to obtain the compound of formula la at a temperature of 60-75 degree Celsius.
  • a suitable base such as aqueous potassium hydroxide and a suitable solvent such as methanol and a suitable acid such as hydrochloric acid to obtain the compound of formula la at a temperature of 60-75 degree Celsius.
  • the hydrolysis of the compound of formula I to the compound of formula la comprises reacting compound of formula I or its salts
  • the base is preferably selected from potassium hydroxide, lithium hydroxide and sodium hydroxide or a mixture thereof, more preferably potassium hydroxide.
  • the solvent is preferably selected from methanol, ethanol, water, ethyl acetate and dichloromethane or a mixture thereof, more preferably methanol.
  • the compound of formula lb wherein X is Na can also prepared by treating the compound of formula la with sodium 2-ethylhexenoate.
  • the compound of formula I or its salts is hydrolyzed in the presence of a suitable base such as potassium hydroxide and a suitable solvent such as methanol to obtain the compound of formula lb, wherein X is potassium.
  • the compound of formula lb is isolated and converted to the compound of formula la 1 by treating with an acid
  • the acid is preferably selected from the group consisting of hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoro acetic acid and oxalic acid, more preferably hydrochloric acid.
  • the compound of formula lb is isolated and treated with a suitable acid such as hydrochloric acid to obtain the compound of formula la 1 , wherein Y is hydrochloric acid.
  • the compound of formula la is converted into the compound of formula la 1 by treating with an acid or a base, typically in the presence of a solvent,
  • Y is hydrochloric acid, sulphuric acid, p-toluenesulphonic acid trifluoroacetic acid, oxalic acid, dicyclohexylamine.
  • the acid is preferably selected from hydrochloric acid, sulphuric acid, p- toluenesulphonic acid, trifluoroacetic acid and oxalic acid.
  • the base is preferably dicyclohexylamine.
  • the solvent is preferably selected from ethyl acetate, acetone, methanol, water or a mixture thereof. More preferably, the solvent is methanol.
  • the compound of formula la is treated with a suitable acid such as hydrochloric acid to obtain its hydrochloride salt.
  • the compound of formula la or its salt is reacted with a compound of formula IV,
  • the reaction is typically carried out in presence of a suitable coupling agent.
  • the suitable coupling agent may be selected from the group consisting of l-ethyl-3-(3- dimethylaminopropyl) carbodiimide hydrochloride (EDC HC1), dicyclohexylcarbodiimide (DCC), 0-benzotriazole-N,N',N’-tetramethyl uronium hexafluoro phosphate (HBTU) and benzotriazol-l-yloxypyrrolidinophosphonium hexafluorophosphate (PyBOP), preferably l-ethyl-3-(3-dimethylaminopropyl) carbodiimide hydrochloride (EDC HC1).
  • EDC HC1 l-ethyl-3-(3- dimethylaminopropyl) carbodiimide hydrochloride
  • DCC dicyclohexylcarbodiimide
  • HBTU 0-benzotriazole-N,N',N’-t
  • the reaction is carried out in presence of a suitable base.
  • the suitable base may be selected from the group consisting of triethylamine, N,N- diisopropylethylamine, 4-dimethylaminopyridine, N,N dimethylethylenediamine or mixture thereof.
  • the reaction is preferably carried out in presence of a suitable solvent.
  • the suitable solvent may be selected from the group consisting of dichloromethane, chloroform, acetone, acetonitrile, tetrahydrofuran, dimethylformamide, N-methyl pyrrolidine, dioxane, nitromethane, pyridine and 2-methyltetrahydrofuran, preferably dichloromethane .
  • the compound of formula la or its salts is preferably reacted with a compound of formula IV at a temperature of 20-35 degree Celsius.
  • the compound of formula la or its salts is reacted with a compound of formula IV in presence of a suitable base such as triethylamine, 4- dimethylaminopyridine and N,N dimethylethylenediamine and a suitable coupling agent such as N-(3-dimethylaminopropyl)-N'-ethylcarbodiimide hydrochloride (EDC-HC1), preferably in presence of a suitable solvent such as dichloromethane, preferably at a temperature of 25-30 degree Celsius.
  • a suitable base such as triethylamine, 4- dimethylaminopyridine and N,N dimethylethylenediamine
  • a suitable coupling agent such as N-(3-dimethylaminopropyl)-N'-ethylcarbodiimide hydrochloride (EDC-HC1)
  • EDC-HC1
  • the invention provides the compound of formula I in significantly high yield and purity as compared to the prior art methods without using complicated isolation and purification processes and in a further aspect, the compound of formula I is converted to the compound of formula V in high yield and purity with ease of procedure and less complexity.
  • the yield of the compound of formula V is 60% or greater, e.g., 70% or greater, 80% or greater, or 90% or greater. In other embodiments, the yield of the compound of formula V is 95% or less, e.g., 85% or less, 75% or less, or 65% or less. In yet other embodiments, the yield of the compound of formula V is in a range of any of the forgoing values, e.g., 60%-95%, 60%-85%, 60%-75%, 70%-95%, 70%-85%, or 80%-95%.
  • the invention also provides the compound of formula V in a highly purified form.
  • the purity of the compound of formula V is 95% or greater, e.g., 97% or greater, 99.0 % or greater, 99.4% or greater, or 99.8% or greater.
  • the purity of the compound of formula V is 99.9% or less, e.g., 99.6% or less, 99.3% or less, 98.5% or less, or 97.5% or less.
  • the purity of the compound of formula V is in a range of any of the forgoing values, e.g., 95%-99.3%, 97%-98.5%, 97%-99.9%, 99.0%-99.6%, 99.0%-99.9%, or 99.4%-99.9%.
  • the yield of the compound of formula V is 70.0%, and the purity is 99.7%.
  • the organic layer was concentrated under vacuum. The residue was taken up in methanol (2500 mL) at 60 to 65 degree Celsius and cooled to 20 to 30 degree Celsius and stirred for 4h, followed by 0 to 5 degree Celsius for 3h. The resulting slurry was filtered and washed with cold methanol (500 mL). The filtered solid was treated with concentrated hydrochloric acid (218.3 g) in methanol (3200 mL) followed by addition of water (1600 mL).
  • the dichloromethane layer was then diluted with acetone (1.0 L) and was treated with concentrated hydrochloric acid (67.0 g) and stirred at 20 to 30 degree Celsius.
  • the resulting slurry was filtered and the solid cake was successively washed with 2:1 mixture of dichloromethane-acetone (300mL), water (3.0 L) and acetone (200 mL).
  • the reaction mixture was treated with N,N-dimethylethylenediamine (217.63 g) at 20 to 30 degree Celsius and stirred for 4h.
  • the organic layer was washed with water (6.0 L) and concentrated under vacuum.
  • the residue was dissolved in dichlo methane- methanol mixture (1:5) (7.2 L) and treated with acetic acid-methanol mixture (415.11 g acetic acid and 600 mL methanol) and stirred at 20 to 30 degree Celsius.
  • the resulting slurry was cooled to 0 to 5 degree Celsius, filtered and washed with methanol (600 mL).

Abstract

An improved process for the preparation of Venetoclax. The present invention also relates to an improved process for the preparation of a compound of formula I or its salts, (I) wherein R is C1-4 alkyl; and its use for the preparation of the compound of formula V. (v)

Description

AN IMPROVED PROCESS FOR THE PREPARATION OF VENETOCLAX
FIELD OF THE INVENTION
The present invention relates to an improved process for the preparation of a compound of formula I or its salt,
Figure imgf000003_0001
Formula I,
wherein R is Ci-4 alkyl.
The present invention further relates to an improved process for the conversion of compound of formula I to a compound of formula V,
Figure imgf000003_0002
Formula V (Venetoclax)
The present invention also relates to an improved process for the preparation of the compound of formula V. BACKGROUND OF THE INVENTION
Venetoclax, 4-(4-{ [2-(4-chlorophenyl)-4,4-dimethylcyclohex-l-en-l-yl]methyl} piperazin-l- yl )-A'-( { 3-nitro-4[itctrahydro-2//-pyran-4ylmcthyl)aminoJphcnyl } sulfonyl)-2-( 1 H- pyrrolo[2,3-Z>]pyridin-5-yloxy)benzamide) is represented by a compound of formula V.
Figure imgf000004_0001
Formula V
Venetoclax (marketed under the trade name Venclexta, Abbvie Inc.) is an inhibitor of anti- apopto tic Bcl-2 proteins. It is indicated for the treatment of patients with chronic lymphocytic leukemia (CLL). Venetoclax, as represented by formula V, is disclosed in WO 2011/149492. Various processes for the preparation of venetoclax have been disclosed in literature.
WO 2011/149492 and Bioconjugate Chemistry 2014, 2081 describe a process for the preparation of compound of formula V as depicted in scheme- 1 :
Figure imgf000005_0001
(Venetoclax)
Scheme -1 In stage- 1 , a reaction of the compound of formula II with the compound of formula III is carried out in the presence of dipotassium hydrogen phosphate (K2HP04) at a temperature of 135 degree Celsius with stirring for about 24 hours. The compound of formula I obtained at stage- 1, is purified by silica gel chromatography. The yield is ca. 37%. Purity is not reported.
In stage-2, the compound of formula I is hydrolysed to obtain a compound of formula la in the presence of sodium hydroxide and dioxane as a solvent.
Subsequently, the compound of formula la is coupled with a compound of formula IV to obtain the compound of formula V (stage-3).
In stage-3, coupling of the compound of formula la with the compound of formula IV is performed in the presence of 1- ethyl-3- [3--(dimethyiamino)propyl] -carbodiimide hydrochloride (EDC-HC1) and 4-dimethylaminopyridine in dichloro me thane. The obtained compound of formula V is purified by silica gel chromatography. The yield is ca. 32%. Purity is not reported. Another process for the synthesis of the compound of formula I is disclosed in WO 2014/165044,
Figure imgf000006_0001
Scheme-2
wherein R=t-Butyl
In WO 2014/165044, the preparation of the compound of formula I involves use of a phosphine compound and a palladium compound. The reaction of a compound of formula II1 with a compound of formula III1 is carried out in the presence of a phosphine compound, sodium tert-butoxide and Pdidba-, at 55 to 75 degree Celsius to give the compound of formula I.
Sodium tert-butoxide and the compound of formula II1 in toluene solution were combined in tetrahydrofuran in a suitable reactor and sparged with nitrogen for NLT 45 min.
Pd2dba3, phosphine and the compound of formula III1 were combined in a second suitable reactor and purged with nitrogen until oxygen level was NMT 40 ppm.
Using nitrogen pressure, the solution containing the compound of formula II1 and sodium tert-butoxide in toluene/tetrahydrofuran was added through a 0.45 mΐh inline filter to the second reactor.
The compound of formula I was isolated by solvent-extractions using large volumes of solvents such as tetrahydrofuran, heptane and cyclohexane. The process also requires use of amino acids such as L-cysteine. The product was crystallized by seeding. Thereby, the process disclosed in WO 2014/165044 is quite lengthy and complicated. There are other patent applications, such as CN 2014/10582048, CN 2017/1271772, WO 2017/156398 and W02018/029711 which disclose the synthesis of the compound of formula I, used in the synthesis of the compound of formula V. Chinese application CN 2014/10582048 discloses the synthesis of the compound of formula I, using intermediates of formula A and B,
Figure imgf000007_0001
Chinese application CN 2017/1271772 discloses the synthesis of the compound of formula V using intermediates of formula C and D,
Figure imgf000007_0002
In WO 2017/156398, the authors disclose a process for the preparation of the compound of formula V by using intermediates of formula E and formula F,
Figure imgf000007_0003
In WO2018/029711, the compound of formula I is prepared using different intermediates of formula G and H,
Figure imgf000008_0001
wherein, R is Ci-4 alkyl.
From the forgoing, it is apparent that the reported methods for the preparation of the compound of formula V, require stringent operational conditions which are not only tedious but also result in significant yield loss. These processes require use of silica gel chromatography for purification. The work-up procedure also involves tedious solvent exchange methods for the isolation of compound of formula I. Moreover, use of palladium ligands in the synthesis of formula I makes it difficult to control the palladium content in the drug product within the recommended ICH limit i.e. < 10 ppm.
Therefore, there remains a need to formulate an efficient, simple and industrially viable synthetic process which can overcome the drawbacks of the prior art as well as provide the compound of formula V i.e. venetoclax and its intermediates in high yield and purity.
OBJECT OF THE INVENTION
It is an object of the present invention to overcome the above-mentioned drawbacks of the prior art.
It is another objective of the present invention to provide a process for the synthesis of a compound of formula I. It is another objective of the present invention to avoid tedious and long work-up process for the synthesis of the compound of formula I or its salts. It is yet another objective of the present invention to provide a process for the conversion of the compound of formula I or its salts to the compound of formula V. It is further objective of the present invention to provide an improved and commercially viable process for the synthesis of the compound of formula V.
SUMMARY OF THE INVENTION
In first aspect, the present invention relates to a process for the preparation of the compound of formula V,
Figure imgf000009_0001
Formula V comprising the reaction of a compound of formula II,
Figure imgf000009_0002
Formula II
wherein R is C1-4 alkyl; with a compound of formula III,
Figure imgf000010_0001
Formula III in the presence of an alkyl amine to obtain a compound of formula I or its salts,
Figure imgf000010_0002
Formula I
wherein R is C1-4 alkyl; and converting the compound of formula I or its salts to the compound of formula V.
Another aspect of the present invention is to provide a process for the preparation of compound of formula I or its salts,
Figure imgf000010_0003
Formula I comprising the reaction of a compound of formula II,
Figure imgf000011_0001
Formula II
wherein R is C1-4 alkyl; with a compound of formula III,
Figure imgf000011_0002
Formula III in the presence of an alkyl amine.
Another aspect of the present invention is to provide a compound of formula lb.
Figure imgf000011_0003
Formula lb
wherein X= K, Na, Li
Another aspect of the present invention is to provide salts of the formula la represented as a compound of formula la1,
Figure imgf000012_0001
Formula la wherein Y is hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoro acetic acid, oxalic acid, dicyclohexylamine; and to provide a process for their preparation.
DETAILED DESCRIPTION OF THE INVENTION
In one aspect, the present invention relates to a process for the preparation of a compound of formula V,
Figure imgf000012_0002
Formula V comprising the steps of: a) reacting a compound of formula II,
Figure imgf000013_0001
Formula II with a compound of formula III,
Figure imgf000013_0002
Formula III in the presence of an alkyl amine to obtain a compound of formula I or its salts,
Figure imgf000013_0003
heme-3
wherein R is C1-4 alkyl; b) converting the compound of formula I or its salts to a compound of formulaV.
The Ci-4 alkyl is selected from methyl, ethyl, propyl, isopropyl, n-butyl, isobutyl and t- butyl, preferably methyl. The alkylamine may be selected from the group consisting of N,N- diisopropylethylamine (DIPEA), trimethylamine (Me3N), triethylamine (Et3N), N,N- dimethylaniline (DMA), l,4-diazabicyclo[2.2.2]octane (DABCO), 1,8- Diazabicyclo[5.4.0]undec-7-ene (DBU) and l,5-Diazabicyclo [4.3.0]non-5-ene (DBN), preferably N,N-diisopropylethyl amine (DIPEA).
The reaction is preferably carried out in the presence of an aprotic solvent selected from the group consisting of dichloromethane, dimethylsulphoxide, chloroform, acetone, acetonitrile, tetrahydrofuran, dimethylformamide, N-methyl pyrrolidine, dioxane, nitromethane, pyridine, 2-methyltetrahydrofuran and mixtures thereof. Most preferably, the reaction is carried out in dimethylsulphoxide (DMSO).
The reaction is preferably carried out at 90 to 120 degree Celsius, more preferably at 95 to 105 degree Celsius.
In a preferred embodiment, the compound of formula II, wherein R is methyl, is reacted with the compound of formula III, in the presence of a suitable alkylamine such as N, N-diisopropylethylamine and a suitable solvent such as dimethylsulphoxide. Preferably, the reaction is carried out at 90 to 115 degree Celsius, more preferably at 95 to 105 degree Celsius. The reaction mixture is stirred for 24-28 hours at the same temperature to obtain the compound of formula I.
The salt of the compound of formula I is typically prepared by reacting the compound of formula I with an acid selected from the group consisting of hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoroacetic acid and oxalic acid. Preferably, the salt of the compound of formula I is the hydrochloride salt.
The salt of the compound of formula I is preferably prepared in the presence of a solvent selected from methanol, ethanol, water, ethyl acetate, acetone and dichloromethane or a mixture thereof, more preferably methanol.
In a preferred embodiment, the salt of the compound of formula I is prepared by reacting the compound of formula I with a suitable acid such as concentrated hydrochloric acid in a suitable solvent such as methanol to give the hydrochloride salt of the compound of formula I.
The methods for the preparation of the compound of formula I as reported in the prior arts such as WO 2011/149492 involve the use of palladium reagents which require long and tedious work-up procedures for the isolation and purification of the product. Other processes such as disclosed in WO 2014/165044 involve the use of silica gel column chromatography for purifications which result in significant yield loss.
The inventors of the present invention found that using an alkylamine such as diisopropylethyl amine (DIPEA) in the preparation of the compound of formula I, surprisingly improves the yield at the first stage and the high yield of the compound of formula I or its salts, effects the further stages of the synthesis of venetoclax and as a result venetoclax is obtained in significantly higher yield and purity without cumbersome isolation or chromatographic purifications.
In some embodiments, the yield of the compound of formula I or a salt thereof is 60% or greater, e.g., 70% or greater, 80% or greater, or 90% or greater. In other embodiments, the yield of the compound of formula I or a salt thereof is 95% or less, e.g., 85% or less, 75% or less, or 65% or less. In yet other embodiments, the yield of the compound of formula I or a salt thereof is in a range of any of the forgoing values, e.g., 60%-95%, 60%-85%, 60%-75%, 70%-95%, 70%-85%, or 80%-95%.
The invention also provides the compound of formula I or a salt thereof in a highly purified form. In some embodiments, the purity of the compound of formula I or a salt thereof is 95% or greater, e.g., 97% or greater, 99.0% or greater, 99.4% or greater, or 99.8% or greater. In other embodiments, the purity of the compound of formula I or a salt thereof is 99.9% or less, e.g., 99.6% or less, 99.3% or less, 98.5% or less, or 97.5% or less. In yet other embodiments, the purity of the compound of formula I or a salt thereof is in a range of any of the forgoing values, e.g., 95%-99.3%, 97%-98.5%, 97 %- 99.9%, 99.0%-99.6%, 99.0%-99.9%, or 99.4%-99.9%. In a particularly preferred embodiment, the yield of the hydrochloride salt of the compound of formula I is 74.14% and the purity 99.3%. The compound of formula I or its salts can be further converted to the compound of formula V by processes well known in the prior art.
In the same aspect, the present invention relates to the conversion of the compound of formula I or its salts to the compound of formula V.
In an embodiment, the compound of formula I or its salt is hydrolyzed to the compound of formula la,
Figure imgf000016_0001
Formula I Formula la
Scheme-4
wherein R is Ci-4 alkyl
The hydrolysis of the compound of formula I or its salts is preferably carried out in presence of a base selected from potassium hydroxide, lithium hydroxide and sodium hydroxide or a mixture thereof, preferably potassium hydroxide.
The compound of formula I or its salts is preferably hydrolyzed in presence of a solvent selected from methanol, ethanol, water, ethyl acetate and dichloromethane or a mixture thereof, preferably methanol. The acid is preferably selected from the group consisting of hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoroacetic acid and oxalic acid, more preferably hydrochloric acid. The compound of formula I or its salts is preferably hydrolyzed at a temperature of 55- 80 degree Celsius.
In a preferred embodiment, the compound of formula I or its salts is hydrolyzed in the presence of a suitable base such as aqueous potassium hydroxide and a suitable solvent such as methanol and a suitable acid such as hydrochloric acid to obtain the compound of formula la at a temperature of 60-75 degree Celsius.
In an embodiment, the hydrolysis of the compound of formula I to the compound of formula la comprises reacting compound of formula I or its salts
with a base in a solvent to obtain a compound of formula lb,
Figure imgf000017_0001
Formula I Formula lb
Scheme-5
wherein X= K, Na, Li
The base is preferably selected from potassium hydroxide, lithium hydroxide and sodium hydroxide or a mixture thereof, more preferably potassium hydroxide.
The solvent is preferably selected from methanol, ethanol, water, ethyl acetate and dichloromethane or a mixture thereof, more preferably methanol.
The compound of formula lb wherein X is Na can also prepared by treating the compound of formula la with sodium 2-ethylhexenoate. In a preferred embodiment, the compound of formula I or its salts is hydrolyzed in the presence of a suitable base such as potassium hydroxide and a suitable solvent such as methanol to obtain the compound of formula lb, wherein X is potassium.
In another embodiment, the compound of formula lb is isolated and converted to the compound of formula la1 by treating with an acid,
Figure imgf000018_0001
Formula lb Formula l
Scheme-6 wherein X= K, Na, Li and Y is hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoro acetic acid, oxalic acid, dicyclohexylamine The acid is preferably selected from the group consisting of hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoro acetic acid and oxalic acid, more preferably hydrochloric acid.
In a preferred embodiment, the compound of formula lb is isolated and treated with a suitable acid such as hydrochloric acid to obtain the compound of formula la1, wherein Y is hydrochloric acid.
In another embodiment, the compound of formula la is converted into the compound of formula la1 by treating with an acid or a base, typically in the presence of a solvent,
Figure imgf000019_0001
Formula la
Scheme-7
wherein Y is hydrochloric acid, sulphuric acid, p-toluenesulphonic acid trifluoroacetic acid, oxalic acid, dicyclohexylamine.
The acid is preferably selected from hydrochloric acid, sulphuric acid, p- toluenesulphonic acid, trifluoroacetic acid and oxalic acid. The base is preferably dicyclohexylamine.
The solvent is preferably selected from ethyl acetate, acetone, methanol, water or a mixture thereof. More preferably, the solvent is methanol. In a preferred embodiment, the compound of formula la is treated with a suitable acid such as hydrochloric acid to obtain its hydrochloride salt.
In an embodiment, the compound of formula la or its salt is reacted with a compound of formula IV,
Figure imgf000020_0001
Scheme-5
The reaction is typically carried out in presence of a suitable coupling agent.
The suitable coupling agent may be selected from the group consisting of l-ethyl-3-(3- dimethylaminopropyl) carbodiimide hydrochloride (EDC HC1), dicyclohexylcarbodiimide (DCC), 0-benzotriazole-N,N',N’-tetramethyl uronium hexafluoro phosphate (HBTU) and benzotriazol-l-yloxypyrrolidinophosphonium hexafluorophosphate (PyBOP), preferably l-ethyl-3-(3-dimethylaminopropyl) carbodiimide hydrochloride (EDC HC1).
The reaction is carried out in presence of a suitable base. The suitable base may be selected from the group consisting of triethylamine, N,N- diisopropylethylamine, 4-dimethylaminopyridine, N,N dimethylethylenediamine or mixture thereof.
The reaction is preferably carried out in presence of a suitable solvent.
The suitable solvent may be selected from the group consisting of dichloromethane, chloroform, acetone, acetonitrile, tetrahydrofuran, dimethylformamide, N-methyl pyrrolidine, dioxane, nitromethane, pyridine and 2-methyltetrahydrofuran, preferably dichloromethane .
The compound of formula la or its salts is preferably reacted with a compound of formula IV at a temperature of 20-35 degree Celsius. In a preferred embodiment, the compound of formula la or its salts is reacted with a compound of formula IV in presence of a suitable base such as triethylamine, 4- dimethylaminopyridine and N,N dimethylethylenediamine and a suitable coupling agent such as N-(3-dimethylaminopropyl)-N'-ethylcarbodiimide hydrochloride (EDC-HC1), preferably in presence of a suitable solvent such as dichloromethane, preferably at a temperature of 25-30 degree Celsius.
Thus, in one aspect, the invention provides the compound of formula I in significantly high yield and purity as compared to the prior art methods without using complicated isolation and purification processes and in a further aspect, the compound of formula I is converted to the compound of formula V in high yield and purity with ease of procedure and less complexity.
In some embodiments, the yield of the compound of formula V is 60% or greater, e.g., 70% or greater, 80% or greater, or 90% or greater. In other embodiments, the yield of the compound of formula V is 95% or less, e.g., 85% or less, 75% or less, or 65% or less. In yet other embodiments, the yield of the compound of formula V is in a range of any of the forgoing values, e.g., 60%-95%, 60%-85%, 60%-75%, 70%-95%, 70%-85%, or 80%-95%.
The invention also provides the compound of formula V in a highly purified form. In some embodiments, the purity of the compound of formula V is 95% or greater, e.g., 97% or greater, 99.0 % or greater, 99.4% or greater, or 99.8% or greater. In other embodiments, the purity of the compound of formula V is 99.9% or less, e.g., 99.6% or less, 99.3% or less, 98.5% or less, or 97.5% or less. In yet other embodiments, the purity of the compound of formula V is in a range of any of the forgoing values, e.g., 95%-99.3%, 97%-98.5%, 97%-99.9%, 99.0%-99.6%, 99.0%-99.9%, or 99.4%-99.9%. In a particularly preferred embodiment, the yield of the compound of formula V is 70.0%, and the purity is 99.7%. The process of the present invention is advantageous in the respect that it is economical, industrially viable and commercially favourable. Further, the process of the present invention does not involve use of palladium, hence making the process more attractive.
EXPERIMENTAL
Detailed experimental parameters according to the present invention are provided by the following examples, which are intended to be illustrative and not limiting of all possible embodiments of the invention.
Examples
Example-1
Preparation of methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5- dimethyl-3 ,4,5,6-tetrahydro [1,1 '-biphenyl]-2-l)methyl)piperazin- 1 -yl)-benzoate. HC1.
Figure imgf000022_0001
A mixture of methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-fluorobenzoate (500.0 g), l-((4'-Chloro-5,5-dimethyl-3,4,5,6-tetrahydro-[l,l'-biphenyl]-2-yl)- methyljpiperazine (1114.0 g) and N,N-diisopropylethylamine (225.8 g) in dimethylsulphoxide (1500 mL) was heated to 90 to 105 degree Celsius for 26h. The reaction mixture was diluted with ethyl acetate (2500 ml) and washed with water (2500 mL). The organic layer was concentrated under vacuum. The residue was taken up in methanol (2500 mL) at 60 to 65 degree Celsius and cooled to 20 to 30 degree Celsius and stirred for 4h, followed by 0 to 5 degree Celsius for 3h. The resulting slurry was filtered and washed with cold methanol (500 mL). The filtered solid was treated with concentrated hydrochloric acid (218.3 g) in methanol (3200 mL) followed by addition of water (1600 mL). The resulting slurry was cooled to 0 to 5 degree Celsius, filtered and washed with a 2:1 mixture of methanol-water and the solid dried under vacuum at 50 to 60 degree Celsius for 16 h to provide methyl 2-((lH-pyrrolo[2,3-b]pyridin-5- yl)oxy)-4-(4-((4'-chloro-5,5-dimethyl-3,4,5,6-tetrahydro[l,l'-biphenyl]-2- l)methyl)piperazin- 1 -yl)-benzoate. HC1. Yield: 74.14% (805g)
HPLC Purity: -99.3%
1H NMR data-(DMS 0-d6) : d 0.942 (s, 6H), 1.444 (t, J=6.4 Hz, 2H), 2.014 (s, 2H), 2.366 (t, br, 2H), 2.723 (d, 2H), 3.281 (m, 4H), 3.702 (m, 2H), (m, d, J=12.8 Hz, 8H), 3.542 (s, 2H), 3.659 (s, 3H), 6.385 (dd, J= 1.6, 2.0, 3.2, 3.6Hz, 1H), 6.414-6.420 (d,
J=2.4Hz, 1H), 6.776 (dd, J=2.4, 9.2Hz, 1H), 7.105 (d, J=8.4Hz, 2H), 7.395( d, J=8.4Hz, 2H), 7.438 (d, J=2.0, 1H), 7.483 (t, J=2.8Hz, 1H), 7.781 (d, J=9.2Hz, 1H), 7.999 (d, J=2.8Hz, 1H), 10.752 (s, br, 1H), 11.666 (s,lH).
Example-la
Preparation of methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5- dimethyl-3 ,4,5,6-tetrahydro [1,1 '-biphenyl]-2-l)methyl)piperazin- 1 -yl)-benzoate. oxalic acid salt.
Figure imgf000023_0001
Me Me A mixture of methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5- dimethyl-3,4,5,6-tetrahydro[l,l'-biphenyl]-2-l)methyl)piperazin-l-yl)-benzoate(5.0 g) in acetone (50 mL) was treated with oxalic acid solution (1.53 g oxalic acid in 50 mL of acetone) and stirred at 30-35 degree Celsius for 2-3h followed by 20-30 degree Celsius for 4-5h. The resulting slurry was filtered, washed with acetone (25 mL) and the solid dried under vacuum at 40-45 degree Celsius for 16 h to furnish the oxalate salt of methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5-dimethyl-3,4,5,6- tetrahydro[l,l'-biphenyl]-2-l)methyl)piperazin-l-yl)-benzoate. oxalic acid salt. Yield: 29.46% (1.7g)
HPLC Purity: 77.24%
1H NMR (DMSO-d6): d 0.93 (s, 6H), 1.41 (t, J=5.6 Hz, 2H), 1.98 (s, 2H), 2.18 (t, br, 2H) 2.42 (m, 4H), 2.97 (s, 2H), 3.21 (m, 4H), 3.65 (s, 3H),6.37 (dd, J=l.6, 3.2 Hz, 2H), 6.74 (dd, J=2.0, 2.4 Hz, 1H), 7.08 (m, 2H), 7.34 (m, 2H), 7.42 (d, J=2.8 Hz, 1H), 7.47
(t, J-2.8, 2.4 Hz, 1H), 7.74 (d, J=8.8 Hz, 1H), 7.99 (d, J=2.4 Hz, 1H), 11.63 (s, 1H, NH).
Example-lb
Preparation of methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5- dimethyl-3 ,4,5,6-tetrahydro [1,1 '-biphenyl]-2-l)methyl)piperazin- 1 -yl)-benzoate. p- toluenesulfonic acid salt.
Figure imgf000024_0001
A mixture of methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5- dimethyl-3 ,4,5,6-tetrahydro [1,1 '-biphenyl]-2-l)methyl)piperazin- 1 -yl)-benzoate (1.0 g) in acetone (10 mL) was treated with p-toluenesulfonicacid monohydrate (0.65 g) and stirred at 20-30 degree Celsius for 4-5h. The resulting slurry was filtered, washed with acetone (10 mL) and the solid dried under vacuum at 45-50 degree Celsius for 16 h to furnish the methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5- dimethyl-3 ,4,5,6-tetrahydro [1,1 '-biphenyl]-2-l)methyl)piperazin- 1 -yl)-benzoate. p- toluenesulfonic acid salt. Yield: 91.05 % (1.12 g)
HPLC Purity: 98.08%
1H NMR (DMSO-d6): d q.95 (s, 6H), 1.44 (t, 2H), 1.99 (s, 1H), 2.03 (s,2H), 2.21 (t, br, 2H), 2.29 (s,6H), 2.75 (m, 2H), 3.08 (m, 2H), 3.28 (m, 2H), 3.60 (m, 2H), 3.66 (s, 3H), 3.74 (m, 2H), 6.36 (dd, J=2.0 Hz, 2H), 6.77 (dd, J=2.4, Hz, 1H), 7.08 (m, 6H), 7.39 (d,
J=8.0 Hz, 2H), 7.49 (m, 5H), 7.78 (d, J=9.2 Hz, 1H), 7.99 (d, J=2.8 Hz, 1H), 11.68 (s, 1H, NH).
Example-2
2-(( lH-pyrrolo[2, 3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5-dimethyl-3, 4,5,6- tetrahydro[l, l'-biphenyl]-2-yl)methyl)piperazin- l-yl)benzoic acid HC1.
Figure imgf000025_0001
A mixture of methanol (2.0 L), methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4- ((4'-chloro-5,5-dimethyl-3,4,5,6-tetrahydro[l,r-biphenyl]-2-yl)methyl) piperazin-l-yl)- benzoate hydrochloride (200.0 g), potassium hydroxide (106.2 g) and water (400 mL) was heated to 65 to75 degree Celsius for 9h. The reaction mixture was diluted with water and the product was extracted with dichloro methane (2.0 L). The dichloromethane layer was then diluted with acetone (1.0 L) and was treated with concentrated hydrochloric acid (67.0 g) and stirred at 20 to 30 degree Celsius. The resulting slurry was filtered and the solid cake was successively washed with 2:1 mixture of dichloromethane-acetone (300mL), water (3.0 L) and acetone (200 mL). The solid was dried under vacuum at 50 to 60 degree Celsius for 16 h to provide 2-((lH- pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4’-chloro-5,5-dimethyl-3,4,5,6-tetrahydro[l,r- biphenyl]-2-yl)methyl)piperazin- l-yl)benzoicacid hydrochloride.
Yield: 92.08% (l80g)
HPLC Purity: -99.36 % 1H NMR data-(DMSO-d6): d 0.947 (s, 6H), 1.452 (t, J=6.4Hz, 2H), 2.020 (s, 2H), 2.337 (t, br, 2H), 2.743 (d, 2H), 3.301 (m, 4H), 3.670 (m, 2H), 3.559 (d, J=4.0Hz, 2H), 6.378 (dd, J=l .6, 2.0, 3.2, 3.6Hz, 1H), 6.408 (d, J=2.0Hz, 1H), 6.761 (dd, J=2.4, 8.8Hz, 1H) 7.106 (d, J=8.8Hz, 2H), 7.40 (d, J=8.4Hz, 2H), 7.406 (s, 1H), 7.476 (t, J=2.8, 3.2Hz, 1H), 7.778 (d, J=9.2Hz, 1H), 7.985 (d, J=2.4Hz, 1H), 10.431 (s, br, 1H), 11.634 (s, 1H), 12.266 (s, br, 1H).
Example-2a
Preparation of Potassium 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5- dimethyl-3,4,5,6-tetrahydro[l,r-biphenyl]-2-yl)methyl)piperazin-l-yl)benzoate.
Figure imgf000026_0001
A mixture of methanol (130.0 L), methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4- ((4'-chloro-5,5-dimethyl-3,4,5,6-tetrahydro[l,l'-biphenyl]-2-l)methyl)piperazin-l-yl)- benzoate. HC1 (10.0 g), potassium hydroxide (10.6 g) and distilled water (20 mL) was heated to 60-70 degree Celsius for 3h. The reaction mixture was diluted with distilled water (40 ml) and extracted the product with dichloro methane (60.0 L). The dichloromethane layer was distilled out completely followed by slurry formation in acetone (80.0 L). The resulting slurry was filtered and the solid cake was washed with acetone (20mL). The solid was dried under vacuum at 30-35 degree Celsius for 17 h to furnish Potassium 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5- dimethyl-3,4,5,6-tetrahydro[l,r-biphenyl]-2-yl)methyl)piperazin-l-yl)benzoate.
Yield: 78.9% (4.10 g).
HPLC Purity: 94.0%
Example-2b
Preparation of Lithium 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5- dimethyl-3,4,5,6-tetrahydro[l,r-biphenyl]-2-yl)methyl)piperazin-l-yl)benzoate.
Figure imgf000027_0001
A mixture of methanol (65.0 L), methyl 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4- ((4'-chloro-5,5-dimethyl-3,4,5,6-tetrahydro[l,r-biphenyl]-2-yl)methyl)piperazin-l-yl)- benzoate. HC1 (5.0 g), lithium hydroxide (3.37 g) and distilled water (10 mL) was heated to 60-70 degree Celsius for 3h. The reaction mixture was diluted with distilled water (40 ml) and extracted the product with dichloromethane (60.0 L). The dichloromethane layer was distilled out completely followed by slurry formation in acetone (50.0 L). The resulting slurry was filtered and the solid cake was washed with acetone (lOmL). The solid was dried under vacuum at 35-40 degree Celsius for 17 h to furnish Lithium 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5, 5-dimethyl- 3,4,5,6-tetrahydro[l,r-biphenyl]-2-yl)methyl)piperazin-l-yl)benzoate. Yield: 64.2 % (1.58 g)
Example-2c
Preparation of Sodium 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4,-chloro-5,5- dimethyl-3,4,5,6-tetrahydro[l,r-biphenyl]-2-yl)methyl)piperazin-l-yl)benzoate.
Figure imgf000028_0001
A solution of sodium-2-ethylhexenoate (0.32 g) in ethyl acetate (5 mL) was added to a mixture of 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5, 5-dimethyl-
3,4,5,6-tetrahydro[l,l'-biphenyl]-2-yl)methyl)piperazin-l-yl)benzoic acid (1.0 g) in ethyl acetate (5 mL) and stirred at 20-30 degree Celsius. The resulting slurry was filtered, washed with ethyl acetate (5 mL) and the solid was dried under vacuum at 50- 55 degree Celsius for 16 h to furnish sodium 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4- (4-((4'-chloro-5,5-dimethyl-3,4,5,6-tetrahydro[l,r-biphenyl]-2-yl)methyl)piperazin-l- yl)benzoate.
Yield: 57.80% (0.6g)
HPLC Purity: 96.97%
1H NMR (DMSO-d6): d q.93 (s, 6H), 1.37 (t, J= 6.4 Hz, 2H), 1.96 (s, 2H), 2.16 (t, br, 2H) 2.21 (m, 4H), 2.73 (s, 2H), 2.97 (s, 4H), 6.26 (dd, J=2.0, 1.2 Hz, 2H), 6.57 (dd, J=L6, 2.0, Hz, 1H), 7.05 (d, J=8.4, 2H), 7.29 (d, J=2.8 Hz, 1H), 7.34 (d, J=8.4 Hz, 2H), 7.38 (t, J=2.8 Hz, 1H), 7.45 (d, J=8.8 Hz, 1H), 7.94 (d, J=2.8 Hz, 1H), 11.49 (s, 1H, NH).
Example-2d
Preparation of 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5, 5-dimethyl-
3,4,5,6-tetrahydro[l,l'-biphenyl]-2-yl)methyl)piperazin-l-yl)benzoic acid. p toluenesulfonic acid salt.
H
nic acid
Figure imgf000029_0001
A mixture of 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5, 5-dimethyl-
3.4.5.6-tetrahydro[l,l'-biphenyl]-2-yl)methyl)piperazin-l-yl)benzoic acid (2.0 g) in acetone (20 mL) was treated with p-toluenesulfonicacid monohydrate (1.33 g) and stirred at 20-30 degree Celsius for 4-5h. The resulting slurry was filtered, washed with acetone (10 mL) and the solid was dried under vacuum at 45-50 degree Celsius for 16 h to furnish 2-((lH-pyrrolo [2,3-b] pyridin-5-yl)oxy)-4 -(4-((4'-chloro-5,5-dimethyl-
3.4.5.6-tetrahydro[l,l'-bi phenyl]-2-yl) methyl)piperazin-l-yl) benzoic acid p - toluenesulfonic acid salt. Yield: 86.92 % (2.26 g)
HPLC Purity: 97.88%
1H NMR (DMSO-d6): d q.95 (s, 6H), 1.43 (t, J=2.0, 2.4 Hz, 2H), 2.03 (s, 2H), 2.21 (t, br, 2H), 2.29 (s, 6H), 2.77 (m, 2H), 3.09 (m, 2H), 3.29 (m, 2H), 3.61 (m, 2H), 3.74 (m, 2H), 6.42 (m, 2H), 6.76 (dd, J=2.0 Hz, 2H), 7.09 (m, 6H), 7.39 (d, J=8.4 Hz, 2H), 7.50
(t, 5H), 7.78 (d, J=9.2 Hz, 1H), 8.03 (d, J=2.4 Hz, 1H), 11.74 (s, 1H, NH). Example-2e
Preparation of 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5, 5-dimethyl- 3,4,5,6-tetrahydro [1,1 -biphenyl] -2-yl)methyl)piperazin- l-yl)benzoic acid dicyclohexylamine salt.
ne
Figure imgf000030_0001
A mixture of (7:3) acetone-methanol (3 mL), 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4- (4-((4'-chloro-5,5-dimethyl-3,4,5,6-tetrahydro[l,l'-biphenyl]-2-yl)methyl)piperazin-l- yl)benzoic acid (0.5 g) and dicyclohexylamine (0.19 g) was stirred at 20-30 degree Celsius for 3-4h. The resulting slurry was filtered, washed with (7:3) acetone-methanol (2 mL) and the solid was dried under vacuum at 40-50 degree Celsius for 16 h to furnish 2-(( lH-pyrrolo[2, 3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5-dimethyl-3, 4,5,6- tetrahydro[l, l'-biphenyl]-2-yl)methyl)piperazin- l-yl)benzoic acid dicyclohexylamine salt.
Yield: 60.6 % (0.4 g)
HPLC Purity: 97.2 % 1H NMR (DMSO-d6): d 0.93 (s, 6H), 1.08 (m, 6H), 1.15 (m, 4H), 1.39 (t, J=6.0, 6.4 Hz, 2H), 1.50 (d, J=l2.4 Hz, 2H), 1.60 (d, J=l3.2 Hz, 4H), 1.77 (d, J=l0.8 Hz, 4H),2.l6 (m, br, 6H) 2.58 (m, 2H), 2.73 (s, 2H), 3.04 (s, 4H), 6.31 (d, J=2.8 Hz, 2H), 6.64 (d, J=7.6, Hz, 1H), 7.04 (d, J=8.0 Hz, 2H), 7.33 (d, J=8.0 Hz, 3H), 7.41 (s, 1H), 7.60 (d, J=8.8 Hz, 1H), 7.95 (d, J=2.0 Hz, 1H), 11.55 (s, 1H, NH)
Example-3 Preparation of 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5, 5-dimethyl- 3,4,5,6-tetrahydro[l,r-biphenyl]-2-yl)methyl)piperazin-l-yl)benzoic acid. HC1.
Figure imgf000031_0001
A mixture of dichloromethane (30.0 L), Potassium 2-((lH-pyrrolo[2,3-b]pyridin-5- yl)oxy)-4-(4-((4'-chloro-5,5-dimethyl-3,4,5,6-tetrahydro[l,l'-biphenyl]-2-yl)methyl) piperazin-l-yl)benzoate (3.0 g)) and acetone (15 mL) was treated with cone hydrochloric acid (1.0 g) and stirred at 20-30 degree Celsius. The resulting slurry was filtered and the solid cake was successively washed with 2:1 mixture of dichloromethane -acetone (9mL), distilled water (51.0 L) and acetone (3.0mL). The solid was dried under vacuum at 50-60 degree Celsius for 16 h to furnish the 2-((lH- pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4-((4'-chloro-5,5-dimethyl-3,4,5,6-tetrahydro 1,1'- biphenyl]-2-yl)methyl)piperazin-l-yl)benzoic acid. HC1.
Yield: 91.3 % (2.72 g)
Example-4
Preparation of 4-(4-{ [2-(4-chlorophenyl)-4,4-dimethylcyclohex-l-en-l-yl]methyl}- piperazin-l-yl)-N-({3-nitro-4[(tetrahydro-2H-pyran-4ylmethyl) amino]- phenyl}sulfonyl)-2-(lH-pyrrolo[2,3-b]pyridin-5-yloxy)benzamide) (Compound of Formula V) A mixture of dichloromethane (12.0 L), 2-((lH-pyrrolo[2,3-b]pyridin-5-yl)oxy)-4-(4- ((4'-chloro-5,5-dimethyl-3,4,5,6-tetrahydro[l,r-biphenyl]-2-yl)methyl) piperazin-l- yl)benzoicacid hydrochloride (600.0 g), triethylamine (299.79 g), 4- dimethylaminopyridine (180.97 g), 3-nitro-4-(((tetrahydro-2H-pyran-4- yl)methyl)amino)benzenesulfonamide (342.56 g) and N-(3-Dimethylaminopropyl)-N'- ethylcarbodiimide hydrochloride (283.97 g) was stirred at 25 to 30 degree Celsius for 8h. The reaction mixture was treated with N,N-dimethylethylenediamine (217.63 g) at 20 to 30 degree Celsius and stirred for 4h. The organic layer was washed with water (6.0 L) and concentrated under vacuum. The residue was dissolved in dichlo methane- methanol mixture (1:5) (7.2 L) and treated with acetic acid-methanol mixture (415.11 g acetic acid and 600 mL methanol) and stirred at 20 to 30 degree Celsius. The resulting slurry was cooled to 0 to 5 degree Celsius, filtered and washed with methanol (600 mL). The solid was dissolved in (9:1) mixture of dicloromethane-methanol (4.8 L) at 35 to 45 degree Celsius, diluted with methanol (1680 mL) and stirred for 8h at 20 to 30 degree Celsius. The resulting slurry was cooled to 0 to 5 degree Celsius, filtered, washed with methanol (600 mL) and the solid was dried under vacuum at 60 to 65 degree Celsius for 18 h to provide 4-(4-{ [2-(4-chlorophenyl)-4,4-dimethylcyclohex-l-en-l-yl]methyl}- piperazin-l-yl)-N-({3-nitro-4[(tetrahydro-2H-pyran-4ylmethyl)amino]- phenyl} sulfonyl)-2-(lH-pyrrolo[2,3-b]pyridin-5-yloxy)benz amide.
Yield: 70.0% (600g)
HPLC Purity: -99.9%
1H NMR data-(DMSO-d6): d 0.921 (s, 6H), 1.204-1.308, 1.598-1.626 (m, d, J=l l.2Hz, 4H), 1.382 (t, J=6.4Hz, 4H), 1.883 (m, 1H), 1.951 (s, 2H), 2.144 (t, br, 2H), 2.199 ( s, br, 4H), 2.754 (s, 2H), 3.073 (s, br, 4H), 3.237-3.291, 3.829-3.865 (m, dd, J=2.8, 3.2, 11.2, l l.6Hz, 6H), 6.189 (d, J=2.0Hz, 1H), 6.388 (dd, J=2.0, 3.6Hz, 1H), 6.678 (d, J=2.0, 2.4, 9.2, 9.6Hz, 1H), 7.037 (d, J=8.8Hz, 2H) 7.11 (d, J=9.2Hz, 1H), 7.34 (d, J=8.0Hz, 2H), 7.495 (m, 2H), 7.535 ( d, J=2.4Hz, 1H), 7.801 (dd, J=2.0, 2.4, 8.8, 9.2Hz, 1H), 8.038 (d, J=2.0Hz, 1H), 8.558 (d, J=2.4Hz, 1H), 8.598 (t, 1H), 11.366 (s, br, 1H), 11.679 (s, 1H).

Claims

WE CLAIM:
1. A process for the preparation of a compound of formula V,
Figure imgf000033_0001
Formula V comprising the steps of:
a) reacting a compound of formula II,
Figure imgf000033_0002
Formula II
wherein R is Ci-4 alkyl; with a compound of formula III,
Figure imgf000033_0003
Formula III in the presence of an alkyl amine to obtain a compound of formula I or its salts,
Figure imgf000034_0001
Formula I
wherein R is C1-4 alkyl;
b) converting the compound of formula I or its salts to the compound of formula V.
2. A process for the preparation of a compound of formula I or its salts,
Figure imgf000034_0002
wherein R is C1-4 alkyl;
comprising the reaction of a compound of formula II,
Figure imgf000034_0003
Formula II
wherein R is C1-4 alkyl;
with a compound of formula III,
Figure imgf000035_0001
Formula III in the presence of an alkyl amine.
3. The process according to claim 1, wherein the conversion of step b) comprises the steps of:
bl) hydrolyzing the compound of formula I or its salt to a compound of formula
Figure imgf000035_0002
Formula la or its salt of the compound of formula la1,
Figure imgf000035_0003
Formula la
wherein Y is hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoro acetic acid, oxalic acid, or dicyclohexylamine; b2) reacting the compound of formula la or the compound of the formula la1 with a compound of formula IV,
Figure imgf000036_0001
Formula IV to obtain the compound of Formula V.
4. The process according to claim 3, wherein the conversion of step bl) comprises the steps of:
bl 1) optionally isolating a compound of formula lb,
Figure imgf000036_0002
Formula lb
wherein X= K, Na, Li bl2) converting the compound of formula lb to a compound of formula la or its salt la1.
5. A compound of formula lb,
Figure imgf000037_0001
Formula lb
wherein X- K, Na, Li
6. The process according to any one of claims 1 to 4, wherein the alkyl amine is selected from the group consisting of N,N-diisopropylethylamine (DIPEA), trimethylamine (Me3N), triethylamine (Et3N), N,N-dimethylaniline (DMA), 1,4- diazabicyclo[2.2.2]octane (DABCO), l,8-Diazabicyclo[5.4.0]undec-7-ene (DBEi) and l,5-Diazabicyclo [4.3.0]non-5-ene (DBN), preferably N,N-diisopropylethyl amine (DIPEA).
7. The process according to any one of claims 1 to 4 or 6, wherein the reaction of the compound of formula II with the compound of formula III is carried out in the presence of an aprotic solvent selected from the group consisting of dichloromethane, dimethylsulphoxide, chloroform, acetone, acetonitrile, tetrahydrofuran, dimethylformamide, N-methyl pyrrolidine, dioxane, nitromethane, pyridine, 2-methyltetrahydrofuran or mixture thereof.
8. The process according to claim 7, wherein the solvent is dimethylsulphoxide.
9. The process according to any one of claims 1 to 4 or 6 to 8, wherein the salt of the compound of formula I is prepared by reacting the compound of formula I with an acid selected from hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoroacetic acid and oxalic acid.
10. The process according to any one of claims 1 to 4 or 6 to 9, wherein the salt of the compound of formula I is the hydrochloride salt.
11. The process according to claim 9 or 10, wherein the salt of the compound of formula I is prepared in the presence of a solvent selected from methanol, ethanol, acetone, dioxane, water, ethyl acetate and dichloro methane or a mixture thereof.
12. The process according to claim 3 or 4, wherein the hydrolysis is carried out in presence of a base selected from potassium hydroxide, lithium hydroxide and sodium hydroxide or mixture thereof.
13. The process according to claim 3, 4 or 12, wherein the hydrolysis is carried out in presence of a solvent selected from methanol, ethanol, acetone, dioxane, water, and dichloromethane or a mixture thereof.
14. The process according to claim 4, wherein the compound of formula lb is converted to a compound of formula la1 by reacting with an acid selected from hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoroacetic acid and oxalic acid, preferably hydrochloric acid.
15. The process according to claim 3 or 4, wherein the salt of formula la1 is prepared by reacting the compound of formula la with an acid selected from hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoroacetic acid and oxalic acid or with dicyclohexylamine as base.
16. A compound of formula la1,
Figure imgf000038_0001
Formula la1
wherein Y is hydrochloric acid, sulphuric acid, p-toluenesulphonic acid, trifluoro acetic acid, oxalic acid, or dicyclohexylamine.
17. The process according to claim 3 or 4, wherein step b3) is carried out in the presence of a coupling agent selected from the group consisting of l-ethyl-3-(3- dimethylaminopropyl) carbodiimide hydrochloride (EDC HC1), dicyclohexylcarbodiimide (DCC), 0-benzotriazole-N,N',N'-tetramethyl uronium hexafluoro phosphate (HBTU) and benzotriazol-l-yloxypyrrolidinophosphonium hexafluorophosphate (PyBOP), preferably l-ethyl-3-(3-dimethylaminopropyl) carbodiimide hydrochloride (EDC HC1).
18. The process according to claim 3, 4 or 17, wherein step b3) is carried out in the presence of a solvent selected from the group consisting of dichloromethane, chloroform, acetone, acetonitrile, tetrahydrofuran, dimethylformamide, N-methyl pyrrolidine, dioxane, nitromethane, pyridine and 2-methyltetrahydrofuran, preferably dichloromethane.
19. The process according to claim 3, 4, 17 or 18, wherein step b3) is carried out in the presence of a base selected from triethylamine, N,N-diisopropylethylamine,
N,N-dimethylethylenediamine, 4-(dimethylamino)pyridine or mixture thereof.
20. A process for the preparation of a compound of formula V,
Figure imgf000039_0001
Formula V comprising the steps of:
a) reacting a compound of formula II,
Figure imgf000040_0001
Formula II
wherein R is C 1-4 alkyl; with a compound of formula III,
Figure imgf000040_0002
Formula III in the presence of diisopropylethylamine to obtain a compound of formula I or its salts,
Figure imgf000040_0003
Formula I
wherein R is C1-4 alkyl; b) hydrolyzing the compound of formula I or its salts to a compound of formula la,
Figure imgf000041_0001
Formula la
c) converting the compound of formula la to its salt of formula la1 ,
Figure imgf000041_0003
Formula la
wherein Y is hydrochloric acid
d) reacting the compound of formula la1 with a compound of formula IV,
Figure imgf000041_0002
Formula IV in the presence of l-ethyl-3-(3-dimethylaminopropyl) carbodiimide hydrochloride, triethylamine, 4-dimethylaminopyridine, N, N-dimethylethylenediamine, and dichloromethane to obtain the compound of Formula V.
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WO2014165044A1 (en) 2013-03-13 2014-10-09 Abbvie Inc. Processes for the preparation of an apoptosis-inducing agent
WO2017156398A1 (en) 2016-03-10 2017-09-14 Assia Chemical Industries Ltd. Solid state forms of venetoclax and processes for preparation of venetoclax
WO2018029711A2 (en) 2016-08-12 2018-02-15 Mylan Laboratories Limited Process for the preparation of venetoclax
WO2018225043A1 (en) * 2017-06-10 2018-12-13 Lupin Limited Solid state forms of an apoptosis-inducing agent and processes thereof

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WO2011149492A1 (en) 2010-05-26 2011-12-01 Abbott Laboratories Apoptosis-inducing agents for the treatment of cancer and immune and autoimmune diseases
WO2014165044A1 (en) 2013-03-13 2014-10-09 Abbvie Inc. Processes for the preparation of an apoptosis-inducing agent
WO2017156398A1 (en) 2016-03-10 2017-09-14 Assia Chemical Industries Ltd. Solid state forms of venetoclax and processes for preparation of venetoclax
WO2018029711A2 (en) 2016-08-12 2018-02-15 Mylan Laboratories Limited Process for the preparation of venetoclax
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