WO2004081535A3 - The establishment of proteome structure profile databases and their uses - Google Patents

The establishment of proteome structure profile databases and their uses Download PDF

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Publication number
WO2004081535A3
WO2004081535A3 PCT/US2004/007628 US2004007628W WO2004081535A3 WO 2004081535 A3 WO2004081535 A3 WO 2004081535A3 US 2004007628 W US2004007628 W US 2004007628W WO 2004081535 A3 WO2004081535 A3 WO 2004081535A3
Authority
WO
WIPO (PCT)
Prior art keywords
proteome
establishment
structure profile
profile databases
analyze
Prior art date
Application number
PCT/US2004/007628
Other languages
French (fr)
Other versions
WO2004081535A2 (en
Inventor
Yeou-Guang Tsay
Cheng-Nan Wang
Original Assignee
Bionova Corp
Yeou-Guang Tsay
Cheng-Nan Wang
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Bionova Corp, Yeou-Guang Tsay, Cheng-Nan Wang filed Critical Bionova Corp
Publication of WO2004081535A2 publication Critical patent/WO2004081535A2/en
Publication of WO2004081535A3 publication Critical patent/WO2004081535A3/en

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Classifications

    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
    • G01N33/6842—Proteomic analysis of subsets of protein mixtures with reduced complexity, e.g. membrane proteins, phosphoproteins, organelle proteins
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2800/00—Detection or diagnosis of diseases
    • G01N2800/52—Predicting or monitoring the response to treatment, e.g. for selection of therapy based on assay results in personalised medicine; Prognosis

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Hematology (AREA)
  • Chemical & Material Sciences (AREA)
  • Urology & Nephrology (AREA)
  • Immunology (AREA)
  • Biomedical Technology (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biotechnology (AREA)
  • Food Science & Technology (AREA)
  • Medicinal Chemistry (AREA)
  • Cell Biology (AREA)
  • Microbiology (AREA)
  • General Health & Medical Sciences (AREA)
  • General Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Other Investigation Or Analysis Of Materials By Electrical Means (AREA)

Abstract

The present invention provides methods for the determination of the proteome, including primary profile and quaternary profile of a proteome. The present invention also provides methods for determining a proteome status in a biological sample. The methods of the invention may be used to analyze the structure of protein drugs or to analyze the status of gene expression.
PCT/US2004/007628 2003-03-12 2004-03-12 The establishment of proteome structure profile databases and their uses WO2004081535A2 (en)

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
US45389003P 2003-03-12 2003-03-12
US60/453,890 2003-03-12
US52683203P 2003-12-03 2003-12-03
US60/526,832 2003-12-03

Publications (2)

Publication Number Publication Date
WO2004081535A2 WO2004081535A2 (en) 2004-09-23
WO2004081535A3 true WO2004081535A3 (en) 2005-06-23

Family

ID=32994530

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2004/007628 WO2004081535A2 (en) 2003-03-12 2004-03-12 The establishment of proteome structure profile databases and their uses

Country Status (2)

Country Link
TW (1) TW200508936A (en)
WO (1) WO2004081535A2 (en)

Families Citing this family (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8105838B2 (en) 2005-06-03 2012-01-31 Waters Technologies Corporation Generation and use of a catalog of polypeptide-related information for chemical analyses
RU2008103988A (en) * 2005-07-11 2009-08-20 Астразенека Аб (Se) METHOD FOR DIAGNOSIS OF MULTIPLE SCLEROSIS
EP3114476A4 (en) * 2013-10-03 2017-11-01 Bioanalytix, Inc. Mass spectrometry-based method for identifying and maintaining quality control factors during the development and manufacture of a biologic
WO2017088769A1 (en) * 2015-11-23 2017-06-01 Sun Jet Biotechnology Inc. Method for verifying the primary structure of protein
MA49757A (en) * 2017-08-01 2020-06-10 Amgen Inc SYSTEMS AND METHODS FOR REAL-TIME PREPARATION OF A SAMPLE OF POLYPEPTIDE FOR MASS SPECTROMETRY ANALYSIS
US11726096B2 (en) * 2018-10-04 2023-08-15 Regeneron Pharmaceuticals, Inc. Fast protein sequencing
CN110999979B (en) * 2019-12-20 2021-06-29 云南农业大学 Moringa seed protease capable of promoting sheep milk coagulation and polypeptide prepared by same and application thereof

Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20020045194A1 (en) * 2000-04-10 2002-04-18 Cravatt Benjamin F. Proteomic analysis
US20020087273A1 (en) * 2001-01-04 2002-07-04 Anderson Norman G. Reference database

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20020045194A1 (en) * 2000-04-10 2002-04-18 Cravatt Benjamin F. Proteomic analysis
US20020087273A1 (en) * 2001-01-04 2002-07-04 Anderson Norman G. Reference database

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
ANDERSON N.L. AND ANDERSON N.G.: "The human plasma proteome. History, character, and diagnostic prospects", MOLECULAR AND CULLULAR PROTEOMICS, vol. 1, no. 11, 2002, pages 845 - 867, XP002986053 *

Also Published As

Publication number Publication date
TW200508936A (en) 2005-03-01
WO2004081535A2 (en) 2004-09-23

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