WO2004041822A1 - Pyrimido[4,5-d]pyrimidine derivatives with anticancer activity - Google Patents

Pyrimido[4,5-d]pyrimidine derivatives with anticancer activity Download PDF

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Publication number
WO2004041822A1
WO2004041822A1 PCT/EP2003/011896 EP0311896W WO2004041822A1 WO 2004041822 A1 WO2004041822 A1 WO 2004041822A1 EP 0311896 W EP0311896 W EP 0311896W WO 2004041822 A1 WO2004041822 A1 WO 2004041822A1
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Prior art keywords
phenyl
methyl
pyrimidin
methoxy
pyrimido
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PCT/EP2003/011896
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French (fr)
Inventor
Apostolos Dermatakis
Marek Michal Kabat
Kin-Chun Luk
Pamela Loreen Rossman
Sung-Sau So
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F. Hoffmann-La Roche Ag
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Application filed by F. Hoffmann-La Roche Ag filed Critical F. Hoffmann-La Roche Ag
Priority to EP03810410A priority Critical patent/EP1560832B1/en
Priority to MXPA05004757A priority patent/MXPA05004757A/en
Priority to BR0316001-7A priority patent/BR0316001A/en
Priority to JP2004548792A priority patent/JP2006513999A/en
Priority to AU2003276190A priority patent/AU2003276190A1/en
Priority to CA002502182A priority patent/CA2502182A1/en
Priority to DE60318888T priority patent/DE60318888T2/en
Publication of WO2004041822A1 publication Critical patent/WO2004041822A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D487/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00
    • C07D487/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00 in which the condensed system contains two hetero rings
    • C07D487/04Ortho-condensed systems
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/33Heterocyclic compounds
    • A61K31/395Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/495Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with two or more nitrogen atoms as the only ring heteroatoms, e.g. piperazine or tetrazines
    • A61K31/505Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim
    • A61K31/519Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim ortho- or peri-condensed with heterocyclic rings
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • A61P35/04Antineoplastic agents specific for metastasis
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2800/00Detection or diagnosis of diseases
    • G01N2800/52Predicting or monitoring the response to treatment, e.g. for selection of therapy based on assay results in personalised medicine; Prognosis

Definitions

  • the present invention is directed to novel pyrimido compounds of the formula
  • R 1 is selected from the group
  • aryl substituted by up to three groups selected from lower alkyl, NR 10 R ⁇ , OR 12 , SR 12 , , halogen, COR 13 , CO 2 R 13 , CONR 13 R 14 , SO 2 NR 13 R 14 , SOR 13 , SO 2 R 13 , CN and
  • heteroaryl DK/22.09.2003 heteroaryl substituted by up to three groups selected from lower alkyl, NR 10 R ⁇ , , OR 12 , SR 12 , halogen, COR 13 , CO 2 R 13 , CONR 13 R 14 , SO 2 NR 13 R 14 , SOR 13 , SO 2 R 13 , CN and NO 2 ,
  • heterocycle substituted by up to three groups selected from lower alkyl, NR R 11 ,
  • C 3 - 10 cycloalkyl substituted by up to three groups selected from lower alkyl NR 10 R ⁇ , OR 12 , SR 12 , halogen, COR 13 , CO 2 R 13 , CONR 13 R 14 , SO 2 NR 13 R 14 , SOR 13 ,
  • C 2 - ⁇ o alkynyl substituted by up to three groups selected from NR 10 R U , OR 12 , SR 12 , halogen, COR 13 , CO 2 R 13 , CONR 13 R 14 , SO 2 NR 13 R 14 , SOR 13 , SO 2 R 13 , CN and NO 2 ;
  • R 2 , R 3 and R 4 are independently selected from the group consisting of
  • R 5 , R 6 , R 7 and R 8 are independently selected from the group
  • R 9 is selected from the group
  • R > 10 and j - Rn il are independentiy selected from the group H,
  • NR 10 R n can form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms and being optionally substituted by the group consisting of one or more lower alkyl, OR 12 , COR 13 , CO 2 R 13 , CONR 13 R 14 ,
  • R 13 and R 14 are independently selected from the group
  • NR 13 R can form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms and being optionally substituted by the group consisting of one or more lower alkyl, OR 17 , COR 17 , CO 2 R 17 , CONR 17 R 18 , SO 2 R 17 , and SO 2 NR 17 R 18 ;
  • R is selected from the group
  • R , R 17 and R 18 are independently selected from the group
  • NR 15 R J and NR 7 R 18 can each independently form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms;
  • R 1 and R 20 are independently selected from the group
  • R 21 is selected from
  • KDR kinase insert domain-containing receptor
  • FGFR fibroblast growth factor receptor
  • LCK T-cell tyrosine kinase p56 c
  • This invention is also directed to pharmaceutical compositions containing such compounds and to methods of treating or controlling cancer, most particularly the treatment or control of breast, lung, colon and prostate tumors.
  • Protein kinases are a class of proteins (enzymes) that regulate a variety of cellular functions. This is accomplished by the phosphorylation of specific amino acids on protein substrates resulting in conformational alteration of the substrate protein. The conformational change modulates the activity of the substrate or its ability to interact with other binding partners.
  • the enzyme activity of the protein kinase refers to the rate at which the kinase adds phosphate groups to a substrate. It can be measured, for example, by determining the amount of a substrate that is converted to a product as a function of time. Phosphorylation of a substrate occurs at the active-site of a protein kinase.
  • Tyrosine kinases are a subset of protein kinases that catalyze the transfer of the terminal phosphate of adenosine triphosphate (ATP) to tyrosine residues on protein substrates. These kinases play an important part in the propagation of growth factor signal transduction that leads to cellular proliferation, differentiation and migration.
  • ATP adenosine triphosphate
  • FGF fibroblast growth factor
  • vascular endothelial growth factor vascular endothelial growth factor
  • VEGF vascular endothelial growth factor
  • KDR kinase insert domain-containing receptor
  • small molecule inhibitors of protein kinase catalytic activity typically block the phosphorylation of substrates by tightly interacting with the protein kinase ATP binding site (or "active site”). See WO 98/24432 and Hennequin L. F. et. al., J. Med. Chem. 2002, 45(6), p ⁇ l300.
  • active site protein kinase ATP binding site
  • WO99/61444 (Warner-Lambert) discloses bicyclic pyrimidines andbicyclic 3,4-dihydropyrimidines of formula
  • Cdkl cyclin dependent kinases
  • Cdk2 cyclin dependent kinases
  • Cdk4 growth factor receptor tyrosine kinase enzymes
  • PDGFR growth factor receptor tyrosine kinase enzymes
  • FGFR growth factor receptor tyrosine kinase enzymes
  • WO 01/29041 Al and WO 01/29042 disclose alkylamino substituted bicyclic nitrogen heterocycles of formula
  • WO 01/64679 Al discloses l,5-disubstituted-3,4-dihydro-lH- pyrimido[4,5-D]pyrimidin-2-one compounds of formulas
  • the present invention relates to novel pyrimido compounds capable of selectively inhibiting the activity of KDR and FGFR. These compounds are useful in the treatment or control of cancer, in particular the treatment or control of solid tumors.
  • this invention relates to compounds of formula
  • the present invention also relates to pharmaceutical compositions comprising a therapeutically effective amount of one or more compounds of formula I and a pharmaceutically acceptable carrier or excipient.
  • the present invention further relates to a method for treating or controlling solid tumors, in particular treatment or control of breast, lung, colon and prostate tumors, most particularly breast or colon tumors, by administering to a human patient in need of such therapy an effective amount of a compound of formula I and/ or a pharmaceutically acceptable salt thereof.
  • the present invention is further directed to novel intermediate compounds useful in the preparation of compounds of formula I.
  • Alkenyl denotes a straight-chain or branched aliphatic hydrocarbon having at least one set of carbon-carbon double bond, for example vinyl, 2-butenyl, and 3-methyl- 2-butenyl.
  • Alkynyl denotes a straight-chain or branched aliphatic hydrocarbon having at least one set of carbon-carbon triple bond, for example ethynyl, and 2-butynyl.
  • Alkyl denotes a straight- chain or branched saturated aliphatic hydrocarbon having 1 to 10, preferably 1 to 6, and more preferably 1 to 4 carbon atoms. Alkyl groups having 1 to 6 carbon atoms are also referred to herein as "lower alkyl.” Typical lower alkyl groups include methyl, ethyl, propyl, isopropyl, butyl, t-butyl, 2-butyl, pentyl and hexyl. As used herein the sample designation - 4 alkyl means alkyl having from 1 to 4 carbon atoms.
  • Alkoxy means an alkyl radical that is attached to the remainder of the molecule by oxygen ( RO -), e.g. methoxy, ethoxy.
  • Aryl means an aromatic carbocyclic radical, for example a 6-10 membered aromatic or partially aromatic ring system.
  • Preferred aryl groups include, but are not limited to, phenyl, naphthyl, tolyl and xylyl.
  • Cycloalkyl means a non-aromatic, partially or completely saturated cyclic aliphatic hydrocarbon group containing 3 to 8 atoms. Examples of cycloalkyl groups include cyclopropyl, cyclopentyl and cyclohexyl.
  • Effective amount or “therapeutically effective amount” means an amount of at least one compound for formula I, or a pharmaceutically acceptable salt thereof, that significantly inhibits tumor growth.
  • Halogen means fluorine, chlorine, bromine or iodine, preferably chlorine or fluorine.
  • Hetero atom means an atom selected from N, O and S, preferably N. If the hetero atom is N, it can be present as -NH- or -N-lower alkyl-. If the hetero atom is S, it can be present as S, SO or SO 2 ⁇
  • Heteroaryl means an aromatic heterocyclic ring system containing up to two rings.
  • Preferred heteroaryl groups include, but are not limited to, thienyl, furyl, indolyl, pyrrolyl, pyridinyl, pyrazinyl, oxazolyl, thiazolyl, quinolinyl, pyrimidinyl, imidazole and tetrazolyl.
  • Heterocycle or “heterocyclyl” means a 3- to 10-membered saturated or partially unsaturated non-aromatic monovalent cyclic radical having from one to 3 hetero atoms selected from nitrogen, oxygen or sulfur or a combination thereof.
  • preferred heterocycles are piperidine, piperazine, pyrrolidine, and morpholine.
  • IC 50 refers to the concentration of a particular compound according to the invention required to inhibit 50% of a specific measured activity. IC 50 can be measured, inter alia, as is described in Example 22, infra.
  • “Pharmaceutically acceptable salt” refers to conventional acid- addition salts or base-addition salts that retain the biological effectiveness and properties of the compounds of formula I and are formed from suitable non-toxic organic or inorganic acids or organic or inorganic bases.
  • Sample acid-addition salts include those derived from inorganic acids such as hydrochloric acid, hydrobromic acid, hydroiodic acid, sulfuric acid, sulfamic acid, phosphoric acid and nitric acid, and those derived from organic acids such as p-toluenesulfonic acid, salicylic acid, methanesulfonic acid, oxalic acid, succinic acid, citric acid, malic acid, lactic acid, fumaric acid, and the like.
  • Sample base-addition salts include those derived from ammonium, potassium, sodium and, quaternary ammonium hydroxides, such as for example, tetramethylammonium hydroxide.
  • the chemical modification of a pharmaceutical compound (i.e. drug) into a salt is a technique well known to pharmaceutical chemists to obtain improved physical and chemical stability, hygroscopicity, flowability and solubility of compounds. See, e.g., H. Ansel et. al., Pharmaceutical Dosage Forms and Drug Delivery Systems (6th Ed. 1995) at pp. 196 and 1456-1457.
  • “Pharmaceutically acceptable” such as pharmaceutically acceptable carrier, excipient, etc., means pharmacologically acceptable and substantially non-toxic to the subject to which the particular compound is administered.
  • substituted as in substituted alkyl, means that the substitution can occur at one or more positions and, unless otherwise indicated, that the substituents at each substitution site are independentiy selected from the specified options.
  • the invention relates to compounds of formula
  • R 1 is selected from the group
  • aryl aryl substituted by up to three groups selected from lower alkyl, NR 10 R ⁇ , OR 12 , SR 12 , halogen, COR 13 , CO 2 R 13 , CONR 13 R 14 , SO 2 NR 13 R 14 , SOR 13 , SO 2 R 13 , CN and NO 2>
  • heteroaryl substituted by up to three groups selected from lower alkyl, NR 10 R ,
  • heterocycle substituted by up to three groups selected from lower alkyl, NR 10 R ⁇ , OR 12 , SR 12 , halogen, COR 13 , CO 2 R 13 , CONR 13 R 14 , SO 2 NR 13 R 14 , SOR 13 , SO 2 R 13 , CN and NO 2 ,
  • C 3 - 10 cycloalkyl substituted by up to three groups selected from lower alkyl NR 10 R ⁇ , OR 12 , SR 12 , halogen, COR 13 , CO 2 R 13 , CONR 13 R 14 , SO 2 NR 13 R 14 , SOR 13 , SO 2 R I3 , CN and NO 2 ,
  • C 2 - ⁇ o alkynyl substituted by up to three groups selected from NR 10 R n , OR 12 , SR 12 , halogen, COR 13 , CO 2 R 13 , CONR 13 R 14 , SO 2 NR 13 R 14 , SOR 13 , SO 2 R 13 , CN and NO 2 ;
  • R , R and R are independently selected from the group consisting of
  • R 5 , R 6 , R 7 and R 8 are independentiy selected from the group
  • R 9 is selected from the group
  • R , 10 an .dA ⁇ R> 11 are independently selected from the group
  • NR 10 R n can form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms and being optionally substituted by the group consisting of one or more lower alkyl, OR 12 , COR 13 , CO 2 R 13 , CONR 13 R 14 , SOR 13 , SO 2 R 13 , and SO 2 NR 13 R 14 ;
  • R 12 is selected from the group
  • heterocycle substituted by hydroxy, alkoxy, lower alkyl, or NR 15 R 16 ;
  • R 13 and R 14 are independently selected from the group
  • NR 13 R 14 can form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms and being optionally substituted by the group consisting of one or more lower alkyl, OR 17 , COR 17 , CO 2 R 17 , CONR 17 R 18 , SO 2 R 17 , and SO 2 NR 17 R 18 ;
  • R 5 is selected from the group
  • R 16 , R 17 and R 18 are independently selected from the group
  • NR 15 R 16 and NR 17 R 18 can each independently form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms;
  • R and R 2 are independently selected from the group
  • R .21 is selected from
  • the invention relates to a compound of formula I wherein R 1 is selected from aryl, and aryl substituted by OR 12 or CONR 13 R 14 . Especially preferred are those compounds, wherein aryl is phenyl.
  • R 1 is selected from lower alkyl and C 2 - 6 alkyl substituted by OR 12 or CONR 13 R 14 .
  • R 2 is H
  • R 2 and R 3 are H.
  • R 2 , R 3 and R are H.
  • R is halogen, preferably F.
  • R , R and R are H and R 7 is O-lower alkyl, preferably O-CH 3 .
  • R 5 is halogen, preferably F.
  • R is H
  • the compounds of the invention are selective for FGF and KDR kinases. These compounds are useful in the treatment or control of cancer, in particular the treatment or control of solid tumors, specifically breast, lung, colon and prostate tumors. These compounds are highly permeable to cell membranes and thus possess advantageous bioavailability profiles such as improved oral bioavailability.
  • the present invention relates to pharmaceutical compositions comprising at least one compound of formula I, or a pharmaceutically acceptable salt or ester thereof.
  • compositions can be administered orally, for example in the form of tablets, coated tablets, dragees, hard or soft gelatin capsules, solutions, emulsions or suspensions. They can also be administered rectally, for example, in the form of suppositories, or parenterally, for example, in the form of injection solutions.
  • compositions of the present invention comprising compounds of formula I, and/ or the salts thereof, may be manufactured in a manner that is known in the art, e.g. by means of conventional mixing, encapsulating, dissolving, granulating, emulsifying, entrapping, dragee-making, or lyophilizing processes.
  • These pharmaceutical preparations can be formulated with therapeutically inert, inorganic or organic carriers. Lactose, corn starch or derivatives thereof, talc, steric acid or its salts can be used as such carriers for tablets, coated tablets, dragees and hard gelatin capsules.
  • Suitable carriers for soft gelatin capsules include vegetable oils, waxes and fats.
  • Suitable carriers for the manufacture of solutions and syrups are water, polyols, saccharose, invert sugar and glucose.
  • Suitable carriers for injection are water, alcohols, polyols, glycerine, vegetable oils, phospholipids and surfactants.
  • Suitable carriers for suppositories are natural or hardened oils, waxes, fats and semi-liquid polyols.
  • the pharmaceutical preparations can also contain preserving agents, solubilizing agents, stabilizing agents, wetting agents, emulsifying agents, sweetening agents, coloring agents, flavoring agents, salts for varying the osmotic pressure, buffers, coating agents or antioxidants. They can also contain other therapeutically valuable substances, including additional active ingredients other than those of formula I.
  • the present invention is further directed to the use of a compound of formula I for treating cancer, in particular breast, colon, lung and prostate cancer, by administering to a human patient in need of such therapy an effective amount of a compound of formula I and/or its salt.
  • the compounds of the present invention are useful in the treatment or control of cell proliferative disorders, in particular oncological disorders.
  • These compounds and formulations containing said compounds are particularly useful in the treatment or control of solid tumors, such as, for example, breast, colon, lung and prostate tumors.
  • the present invention is further directed to a method for treating such solid tumors by administering to a patient in need of such therapy an effective amount of a compound of formula I and/ or its salt.
  • a therapeutically effective amount of a compound in accordance with this invention means an amount of compound that is effective to prevent, alleviate or ameliorate symptoms of disease or prolong the survival of the subject being treated. Determination of a therapeutically effective amount is within the skill in the art.
  • the therapeutically effective amount or dosage of a compound according to this invention can vary within wide limits and may be determined in a manner known in the art. Such dosage will be adjusted to the individual requirements in each particular case including the specific compound(s) being administered, the route of administration, the condition being treated, as well as the patient being treated. In general, in the case of oral or parenteral administration to adult humans weighing approximately 70 kg, a daily dosage of about 10 mg to about 10,000 mg, preferably from about 200 mg to about 1,000 mg, should be appropriate, although the upper limit may be exceeded when indicated. The daily dosage can be administered as a single dose or in divided doses, or for parenteral administration, it maybe given as continuous infusion.
  • the invention is directed to a process for the preparation of a compound of formula I of claim 1, which process comprises a) reacting a compound of the formula
  • R 1 , R 5 , R 6 , R 7 and R 8 are as defined in claim 1, with an aniline derivative of the formula
  • R 9 is H, and if desired,
  • the present invention is also directed to the following novel intermediates useful in the synthesis of compounds of formula I:
  • the compounds of the present invention can be prepared by any conventional means. Suitable processes for synthesizing these compounds are provided in the examples. Generally, compounds of formula I can be prepared according to the below described synthetic route.
  • (+)-l-(2,4-Dichloro-pyrimidin-5-yl)-ethanol was synthesized from 2,4- dichloropyrimidine (Aldrich) according to the literature procedure of Pie, N.; Turck, A.; Martin, P.; Barbey, S.; Queguiner, G. Tet. Lett, 1993 (34), 1605-1608.
  • the reaction mixture was then stirred at room temperature for 65 hours, and at 90 - 100 °C for 2 hours (gas evolution was observed, and reaction was exothermic, with reaction temperature rising to 110 °C).
  • the mixture was cooled to 30 °C with an ice - water, bath. Ice (270 g) was added slowly keeping the reaction below 35 °C.
  • the mixture was then cooled to 5 °C and stirred for 20 minutes.
  • the solid formed was collected by filtration, washed with cold water, hexanes, and diethyl ether and dried by suction to give 5-ethyl uracil. (Yield 38.85 g, 85.9%).
  • N,_ " -Diisopropylethylamine (195 mL, 0.86 mol) (Aldrich) was added slowly to a mixture of 5-ethyl uracil (52.3 g, 0.37 mol) (from Example lc, supra) and phosphorous oxychloride (150 mL, 1.61 mol) (Aldrich) with external cooling in a cold water bath.
  • the mixture was heated at reflux for 3.8 hours and cooled to room temperature. Mixture was then poured into ice (300 g). Ethyl acetate (100 mL) was added and mixture stirred at 20 °C for 30 minutes with cooling in an ice - water bath.
  • N-Bromosuccimimide (64.2 g, 0.35 mol) (Aldrich) and 2,2'-azo-Hs-isobutyro- nitrile (AIBN, 1.78 g) (Aldrich) were added to a solution of 2,4-dichloro-5-ethyl- pyrimidine (56.3 g, 0.32 mol) (from Example lc, supra) in carbon tetrachloride (400 mL). The mixture was heated at reflux for 1.5 hours and cooled to room temperature. Reaction mixture was filtered through TLC grade silica gel and eluted with ethyl acetate ⁇ hexanes (1:8). The filtrate was concentrated to dryness to give (+)-2,4-dichloro-5-(l- bromoethyl) -pyrimidine. (Yield 81.3 g, 100%).
  • (+)-2,4-Dichloro-5-(l-chloroethyl)-pyrimidine (0.41 g; 1.94 mmol) (from Example lb supra) was dissolved in acetonitrile (2 mL).
  • p-Anisidine (0.25 g; 2.03 mmol) (Aldrich)
  • potassium carbonate (0.30 g; 2.19 mmol)
  • potassium iodide 0.04 g; 0.23 mmol
  • (+)-7-Chloro-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH- pyri_ ⁇ udo[4,5-d]pyrimidin-2-one (0.13 g; 0.33 mmol) (from Example le supra) was combined with aniline (100 ⁇ L; 1.10 mmol) (Aldrich). The mixture was heated to 110 °C. A clear solution resulted upon heating and then a new solid precipitated out of solution. Reaction mixture was cooled to room temperature after 45 minutes.
  • This urea was suspended in freshly distilled tetrahydrofuran (3 mL) and cooled in an ice - brine bath. Potassium terf-butoxide (1.0 M in tetrahydrofuran; 0.64 mL; 0.64 mmol) (Aldrich) was added dropwise to the suspension over 5 minutes. The solid went into solution as the potassium tert-butoxide was added. After stirring for an additional 15 minutes in the cold, the reaction mixture was filtered through a bed of silica gel (1.75 g), eluting with 1:1 ethyl acetate - hexanes and then ethyl acetate.
  • This urea was suspended in freshly distilled tetrahydrofuran (10 mL) and cooled in an ice - brine bath. Potassium tert-butoxide (1.0 M in tetrahydrofuran; 2.70 mL; 2.70 mmol) (Aldrich) was added dropwise to the suspension over 8 minutes. The reaction mixture was stirred for an additional 15 minutes in the cold and then filtered through a bed of silica gel (7 - 8 g), eluting with 1:1 ethyl acetate - hexanes and then ethyl acetate.
  • This intermediate urea was dissolved in freshly distilled tetrahydrofuran (0.4 mL) and the resulting solution was cooled in an ice - brine bath. Potassium tert-butoxide (1.0 M in tetrahydrofuran; 60 ⁇ L; 0.06 mmol) (Aldrich) was added. The mixture was stirred for 15 minutes in the cold and then the bath was removed and stirring continued for another 5 minutes. The mixture was filtered through a bed of silica gel and washed with ethyl acetate.
  • (+)-7-Chloro-4-isopropyl-3-(4-methoxy-phenyl)-l-phenyl-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one (22.0 mg; 0.054 mmol) (from Example 19d supra) and aniline (50 ⁇ L; 0.55 mmol) (Aldrich) were combined and heated in an oil bath at 100 °C for 1 hour. Upon cooling, the residue was triturated with hexanes and the supernatant was decanted off. The residue was dissolved in ethyl acetate and washed with water and then brine.
  • This intermediate urea mixture was dissolved in tetrahydrofuran (0.5 mL) and cooled in an ice - brine bath. Potassium tert-butoxide (1.0 M in tetrahydrofuran; 200 ⁇ L; 0.20 mmol) was added dropwise. The mixture was stirred for 15 minutes in the cold and then the bath was removed and stirring continued for another 5 minutes. The mixture was filtered through a bed of silica gel ( ⁇ 1 g) and washed with ethyl acetate.
  • This silyl-ether (3.15 g; 8.85 mmol) was dissolved in tetrahydrofuran - methanol (3:1) and saponified with aqueous sodium hydroxide (1.0 N; 10.0 mL; 10.0 mmol) overnight at ambient temperature.
  • the reaction mixture was partitioned between ethyl acetate and water and acidified with 0.5 N hydrochloric acid to pH ⁇ 4.
  • the organic phase was washed with water and brine, dried over anhydrous sodium sulfate, filtered, and concentrated.
  • This material was generated in situ.
  • This crude silyl-ether (94.3 g) was dissolved in tetrahydrofuran - methanol (3:1, 875 mL)) and saponified with aqueous sodium hydroxide (1.0 N; 300.0 mL; 300.0 mmol) for 46 hours at room temperature.
  • the reaction mixture was concentrated under reduced pressure to remove part of the organic solvents, and then diluted with ethyl acetate. After cooling in an ice - water bath, the mixture was acidified with 1 N aqueous hydrochloric acid (300 mL).
  • This material was generated in situ.
  • This intermediate (0.29 g; 0.41 mmol) was dissolved in anhydrous tetrahydrofuran (1.5 mL) and treated with tetrabutylammonium fluoride (1.0 M in tetrahydrofuran; 1.3 mL; 1.30 mmol) (Aldrich) at 50 °C for 2 hours. The reaction was cooled to room temperature and concentrated. The residue was taken up in ethyl acetate and washed with water (2x) and brine, then dried over anhydrous sodium sulfate and concentrated.
  • Example 15a l-[2-(tert-Butyl-diphenyl-silanyloxy)-l-(R)-methyl-ethyl]-7-chloro-3-(4-methoxy- phenyl)-4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
  • This intermediate (0.23 g; 0.32 mmol) was dissolved in anhydrous tetrahydrofuran (1.0 mL) and treated with tetrabutylammonium fluoride (1.0 M in tetrahydrofuran; 0.9 mL; 0.90 mmol) (Aldrich) at 50 °C for 2 hours. The reaction was cooled to room temperature and concentrated. The residue was taken up in ethyl acetate and washed with water (2x) and brine, then dried over anhydrous sodium sulfate and concentrated.
  • tetrabutylammonium fluoride 1.0 M in tetrahydrofuran; 0.9 mL; 0.90 mmol
  • reaction mixture was diluted with ethyl acetate (20 mL) and was washed with water (2 x 10 mL) and dried over MgSO . Solvent was evaporated under reduced pressure to give crude 7-chloro-3- (4-methoxy-phenyl)-4-methyl-l-[l-(S)-phenyl-ethyl)-3,4-dihydro-lH-pyrimido[4,5- d]pyrimidin-2-one which was used directly in the following step. (308 mg, contains some solvent).
  • This intermediate isocyanate (223 mg, 0.87 mmol) was dissolved in anhydrous tetrahydrofuran (approx. 3 mL) and added via a cannula to a solution of ( ⁇ )-[l-(2,4- dichloro-pyrimidin-5-yl)-ethyl]-(4-methoxyphenyl)-amine (204 mg, 0.67 mmol) (from Example Id supra) and n-butyllithium (2.5 M solution in hexanes, 295 ⁇ L, 0.74 mmol) (Aldrich) in anhydrous tetrahydrofuran (15 mL) at -78 °C.
  • reaction mixture was directly applied on a silica gel column and purified by chromatography with a 0 - 50% ethyl acetate in hexanes gradient.
  • This purified intermediate was then dissolved in a 20% solution of trifluoro acetic acid in dichloromethane (5 mL) and water (300 ⁇ L) at 0 °C. After stirring for 30 minutes at 0 °C the mixture was partitioned between ethyl acetate and 0.5N aqueous sodium hydroxide solution. The pH of the aqueous layer was adjusted to 13 by adding solid sodium hydroxide.
  • the antiproliferative activity of the compounds of the invention is demonstrated below in Examples 22 and 23. These activities indicate that the compounds of the present invention are useful in treating cancer, in particular solid tumors such as breast, lung, prostate and colon tumors, more particularly breast and colon tumors.
  • kinase assays were conducted using an HTRF (Homogeneous Time Resolved Fluorescence) assay. This assay is described in A. J. Kolb et. al., Drug Discovery Today, 1998, 3(7), p 333.
  • recombinant EEE- tagged KDR was activated in the presence of activation buffer (50 mM HEPES, pH 7.4, 1 mM DTT, 10% glycerol, 150 mM NaCl, 0.1 mM EDTA, 26 mM MgCl 2 , and 4 mM ATP).
  • activation buffer 50 mM HEPES, pH 7.4, 1 mM DTT, 10% glycerol, 150 mM NaCl, 0.1 mM EDTA, 26 mM MgCl 2 , and 4 mM ATP.
  • Kinase activity assays were performed in 96-well polypropylene plates (Falcon) with a total volume of 90 ⁇ L in each well. Each well contained 1 ⁇ M KDR substrate (Biotin-EEEEYFELVAKKKK), 1 nM activated KDR, and a test compound with one of 8 assay concentrations ranging from 100 ⁇ M to 128 pM (1:5 serial dilution).
  • the kinase activity assay was done in the presence of 100 mM HEPES, pH 7.4, 1 mM DTT, 0.1 mM Na 2 VO 4 , 25 mM MgCl 2 , 50 mM NaCl (from KDR stock solution), 1% DMSO (from compound), 0.3 mM ATP (at K m concentration) and 0.02% BSA.
  • the reaction was incubated at 37 °C for 30 minutes.
  • 72 ⁇ L of reaction mixture was transferred into a STOP plate containing 18 ⁇ L of revelation buffer (20 mM EDTA, 50 mM HEPES, pH 7.4, 0.02% BSA, 10 nM Eu-labelled anti-pY antibody (final cone.
  • FGFR, EGFR, and PDGFR activity assays were carried out as described above for the KDR activity assay with the following differences.
  • GST-tagged FGFR enzyme was activated at room temperature for 1 hour in the following activation buffer: 100 mM HEPES, pH 7.4, 50 mM NaCl, 20 mM MgCl 2 , and 4 mM ATP.
  • the EGFR kinase activity assay was performed with 1 ⁇ M substrate (Biotin- EEEEYFELV), 1.5 nM EGFR, test compounds, 100 mM HEPES, pH 7.4, 1 mM DTT, 5 mM MgCl 2 , 2 mM MnCl 2 , 1% DMSO, 0.5 ⁇ M ATP (K ra for EGFR), 0.1 mM Na 2 VO 4 , and 0.02% BSA. The rest of the assay was performed in the same manner as the KDR assay.
  • the PDGFR kinase activity assay was performed with 1 ⁇ M substrate (Biotin- EEEEYFELV), 1.0 nM PDGFR, test compounds, 100 mM HEPES, pH 7.4, 1 mM DTT, 5 mM MgCl 2 , 2 mM MnCl 2 , 1% DMSO, 2.3 ⁇ M ATP (K m for PDGFR), 0.1 mM Na 2 VO 4 , and 0.02% BSA. The rest of the assay was performed in the same manner as the KDR assay.
  • the IC 50 value is the concentration of test compound that reduces by 50% the enzyme activity under the test conditions described.
  • test compounds of this invention in cell-based assays was evaluated by BrdU assay using the BrdU kit (Roche Biochemicals 1-647-229).
  • Human umbilical vein endothelial cells (HUVEC, Clonetics CC-2519) were cultured in EGM-2 (Clonetics CC-3162) medium and seeded at 10000 cells per well in a volume of 200 ⁇ L of EGM-2 (Clonetics CC-3162) media in a 96-well flat bottom plates (Costar 3595) overnight.
  • serum starvation media EBM-2 supplemented with 1% heat inactivated FBS (Clonetics CC-4102), 50 ⁇ g per mL gentamycin and 50 ng per mL of amphotercin-B (Clonetics CC-4083), 10 units per mL of Wyeth-Ayerst heparin (NDC0641-0391-25), and 2 mM L-glutamine (GIBCO 25030- 081).
  • serum starving the cells for 24 hours 20 ⁇ L of test compound at 10X test concentration in serum starvation medium with 2.5% DMSO was added to the appropriate wells.
  • the control wells contained 20 ⁇ L of serum starvation medium with 2.5% DMSO. Plates were returned to the incubator for 2 hours. After pre-incubating the cells with the test compounds for 2 hours, 20 ⁇ L of growth factors at 10X assay concentration diluted in serum starvation media , FGF at 50 ng per mL, or VEGF (R8 D systems 293-VE) at 200 ng per mL were added. The final concentration of FGF in the assay was 5 ng per mL and the final concentration of VEGF in the assays was 20 ng per mL.
  • the growth factor free control wells had 20 ⁇ L per well of serum starvation media with the same amount of BSA as the wells with growth factors. The plates were returned to the incubator for an additional 22 hours.
  • the cells were labeled with BrdU (Roche Biochemicals 1-647-229), by adding 20 ⁇ L per well of BrdU labeling reagent that has been diluted (1:100) in serum starvation medium.
  • the plates were hen returned to the incubator for 4 hours.
  • the labeling medium was removed by draining the medium onto paper towels.
  • the cells were fixed and DNA denatured by adding 200 ⁇ L of fixation / denaturation solution to each well and incubating at room temperature for 45 minutes.
  • the fixation / denaturation solution was drained onto paper towels and to each well was added 100 ⁇ L of anti-BrdU-POD and the wells were incubated for 2 hours at room temperature.
  • the IC50 value is the concentration of test compound that inhibits by 50% BrdU labeling, and is a measure of inhibition of cell proliferation.
  • the IC 50 is determined from the linear regression of a plot of the logarithm of the concentration versus percent inhibition. The IC 50 values are shown in Table 2 below.
  • ⁇ Compound A represents a compound of the invention.
  • Step 4 Pass the granulation from Step 3 through a suitable milling equipment.
  • ⁇ Compound A represents a compound of the invention.

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Abstract

Disclosed are novel pyrimido compounds of the formula (I) wherein R1 to R9 are as defined in the specification, that are selective inhibitors of both KDR an FGFR kinases and are selective against LCK. These compounds and their pharmaceutically acceptable salts are anti-proliferative agents useful in the treatment or control of solid tumors, in particular breast, colon, lung and prostate tumors. Also disclosed are pharmaceutical compositions containing these compounds and the use for 10 treating cancer.

Description

PYRI ID0[4 , 5-D PYRIMIDINE DERIVATIVES WITH ANTICANCER ACTIVITY
The present invention is directed to novel pyrimido compounds of the formula
Figure imgf000002_0001
or pharmaceutically acceptable salts thereof, wherein
R1 is selected from the group
H,
-10 alkyl,
Ci-io alkyl substituted by up to three groups selected from aryl, cycloalkyl, heteroaryl, heterocycle, NR10Rπ, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2> wherein the aryl, cycloalkyl, heteroaryl, and heterocycle groups may each independently be substituted by up to three groups selected from NR10Rπ, OR12, SR12, , halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2>
aryl,
aryl substituted by up to three groups selected from lower alkyl, NR10Rπ, OR12, SR12, , halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and
NO2>
heteroaryl, DK/22.09.2003 heteroaryl substituted by up to three groups selected from lower alkyl, NR10Rπ, , OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2,
heterocycle,
heterocycle substituted by up to three groups selected from lower alkyl, NR R11,
OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2,
C3-10 cycloalkyl,
C3-10 cycloalkyl substituted by up to three groups selected from lower alkyl NR10Rπ, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13,
SO2R13, CN and NO2,
C2-ιo alkenyl,
C2-ιo alkenyl substituted by up to three groups selected from NR10Rn, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2, and
C2-ιo alkynyl, substituted by up to three groups selected from NR10RU, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2;
R2 , R3 and R4 are independently selected from the group consisting of
H,
halogen,
COR13,
CO2R13,
CONR13R14,
SO2NR13R14,
SOR13,
SO2R13,
CN, and N02;
R5, R6, R7and R8 are independently selected from the group
H,
lower alkyl,
lower alkyl substituted by hydroxy or alkoxy,
NR15R16,
OH,
OR17,
SR17,
halogen,
COR17,
CO2R 17
CONR17R18,
SO2NR17R18,
SOR 17
SO_R 17 , and
CN;
R9 is selected from the group
H,
Figure imgf000004_0001
COR17;
R > 10 and j - Rn il are independentiy selected from the group H,
COR13,
CO2R13,
CONR13R14,
SO2R13,
SO2NR13R14,
lower alkyl,
lower alkyl substituted by hydroxy, alkoxy or NR15R16,
cycloalkyl,
cycloalkyl substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
heterocycle, and
heterocycle substituted by hydroxy, alkoxy, lower alkyl, or NR 5Rλ ,
or, alternatively, NR10Rn can form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms and being optionally substituted by the group consisting of one or more lower alkyl, OR12, COR13, CO2R13, CONR13R14,
SOR13, SO2R13, and SO2NR13R14;
selected from the group
H,
lower alkyl,
COR13,
CONR13R14,
C2-6 alkyl substituted by hydroxy, alkoxy, or NR15R16, cycloalkyl,
cycloakyl substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
heterocycle, and
heterocycle substituted by hydroxy, alkoxy, lower alkyl, or NR15R16; R13 and R14 are independently selected from the group
H,
lower alkyl,
C2-6 alkyl substituted by hydroxy, alkoxy, or NR15R16,
cycloalkyl,
cycloaklyl substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
heterocycle, and
heterocycle substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
or , alternatively, NR13R can form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms and being optionally substituted by the group consisting of one or more lower alkyl, OR17, COR17, CO2R17, CONR17R18, SO2R17, and SO2NR17R18;
R is selected from the group
H,
lower alkyl,
COR17, and
CO2R17; and
R , R17 and R18 are independently selected from the group
H, and
lower alkyl,
or, alternatively, NR15RJ and NR 7R18 can each independently form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms;
R1 and R20 are independently selected from the group
H, and
lower alkyl; and R21 is selected from
lower alkyl, and
C2-6 alkyl substituted by hydroxy, alkoxy or NR15R16.
These compounds inhibit KDR (kinase insert domain-containing receptor) and FGFR (fibroblast growth factor receptor) kinases and are selective against LCK (T-cell tyrosine kinase p56 c ). These compounds and their pharmaceutically acceptable salts have antiproliferative activity and are useful in the treatment or control of cancer, in particular solid tumors. In addition these compounds have advantageous bioavailability profiles. This invention is also directed to pharmaceutical compositions containing such compounds and to methods of treating or controlling cancer, most particularly the treatment or control of breast, lung, colon and prostate tumors.
Protein kinases are a class of proteins (enzymes) that regulate a variety of cellular functions. This is accomplished by the phosphorylation of specific amino acids on protein substrates resulting in conformational alteration of the substrate protein. The conformational change modulates the activity of the substrate or its ability to interact with other binding partners. The enzyme activity of the protein kinase refers to the rate at which the kinase adds phosphate groups to a substrate. It can be measured, for example, by determining the amount of a substrate that is converted to a product as a function of time. Phosphorylation of a substrate occurs at the active-site of a protein kinase.
Tyrosine kinases are a subset of protein kinases that catalyze the transfer of the terminal phosphate of adenosine triphosphate (ATP) to tyrosine residues on protein substrates. These kinases play an important part in the propagation of growth factor signal transduction that leads to cellular proliferation, differentiation and migration.
For example, fibroblast growth factor (FGF) and vascular endothelial growth factor
(VEGF) have been recognized as important mediators of tumor promoted angiogenesis. VEGF activates endothelial cells by signaling through two high affinity receptors, one of which is the kinase insert domain-containing receptor (KDR). See Hennequin L. F. et. al., J. Med. Chem. 2002, 45(6), ppl300. FGF activates endothelial cells by signaling through the FGF receptor (FGFR). Solid tumors depend upon the formation of new blood vessels (angiogenesis) to grow. Accordingly, inhibitors of the receptors FGFR and KDR that interfere with the growth signal transduction, and thus slow down or prevent angiogenesis, are useful agents in the prevention and treatment of solid tumors. See I ohs W.E. et. al., Current Opinion in Biotechnology 1999, 10, p.544. There are several examples of small molecule inhibitors of protein kinase catalytic activity. In particular, small molecule inhibitors typically block the phosphorylation of substrates by tightly interacting with the protein kinase ATP binding site (or "active site"). See WO 98/24432 and Hennequin L. F. et. al., J. Med. Chem. 2002, 45(6), pρl300. Several of these compounds inhibit multiple targets. For example, WO99/61444 (Warner-Lambert) discloses bicyclic pyrimidines andbicyclic 3,4-dihydropyrimidines of formula
Figure imgf000008_0001
that are asserted to inhibit cyclin dependent kinases Cdkl, Cdk2 and Cdk4 as well as the growth factor receptor tyrosine kinase enzymes PDGFR and FGFR. Some compounds are also asserted to inhibit Cdkό.
US Patent No. 6,150,373 (Hoffmann-La Roche Inc.) discloses bicyclic nitrogen heterocycles of formula
Figure imgf000008_0002
that are stated to inhibit the T-cell tyrosine kinase p56 ° .
WO 01/29041 Al and WO 01/29042 (F. Hoffrnann-La Roche AG) disclose alkylamino substituted bicyclic nitrogen heterocycles of formula
Figure imgf000008_0003
that are stated to inhibit p38 mediated cellular functions and are thus inhibitors of cellular proliferation. WO 01/64679 Al (SmithKline Beecham) discloses l,5-disubstituted-3,4-dihydro-lH- pyrimido[4,5-D]pyrimidin-2-one compounds of formulas
Figure imgf000009_0001
that are stated to be useful in treating CSBP/P38 kinase mediated diseases.
There continues to be a need for easily synthesized, small-molecule compounds effective in inhibiting the catalytic activity of protein kinases, in particular FGFR and KDR kinases for treating one or more types of solid tumors. It is particularly desirable to provide small molecule inhibitors that are selective for FGFR and KDR. This is desirable because of the potential concomitant toxicity and other undesirable complications that may follow from inhibiting multiple targets. It is preferable that such small molecule inhibitors also possess advantageous bioavailability profiles. It is thus an object of this invention to provide such compounds and pharmaceutical compositions containing these compounds.
The present invention relates to novel pyrimido compounds capable of selectively inhibiting the activity of KDR and FGFR. These compounds are useful in the treatment or control of cancer, in particular the treatment or control of solid tumors. In particular this invention relates to compounds of formula
Figure imgf000009_0002
or the pharmaceutically acceptable salts thereof, wherein R , 1, πR2, τR.3, τR>4, τR- 5, τR6, τR.7, R and R9 are as hereinafter defined. The present invention also relates to pharmaceutical compositions comprising a therapeutically effective amount of one or more compounds of formula I and a pharmaceutically acceptable carrier or excipient.
The present invention further relates to a method for treating or controlling solid tumors, in particular treatment or control of breast, lung, colon and prostate tumors, most particularly breast or colon tumors, by administering to a human patient in need of such therapy an effective amount of a compound of formula I and/ or a pharmaceutically acceptable salt thereof.
The present invention is further directed to novel intermediate compounds useful in the preparation of compounds of formula I.
As used herein, the following terms shall have the following definitions.
"Alkenyl" denotes a straight-chain or branched aliphatic hydrocarbon having at least one set of carbon-carbon double bond, for example vinyl, 2-butenyl, and 3-methyl- 2-butenyl.
"Alkynyl" denotes a straight-chain or branched aliphatic hydrocarbon having at least one set of carbon-carbon triple bond, for example ethynyl, and 2-butynyl.
"Alkyl" denotes a straight- chain or branched saturated aliphatic hydrocarbon having 1 to 10, preferably 1 to 6, and more preferably 1 to 4 carbon atoms. Alkyl groups having 1 to 6 carbon atoms are also referred to herein as "lower alkyl." Typical lower alkyl groups include methyl, ethyl, propyl, isopropyl, butyl, t-butyl, 2-butyl, pentyl and hexyl. As used herein the sample designation -4 alkyl means alkyl having from 1 to 4 carbon atoms.
"Alkoxy" means an alkyl radical that is attached to the remainder of the molecule by oxygen ( RO -), e.g. methoxy, ethoxy.
"Aryl" means an aromatic carbocyclic radical, for example a 6-10 membered aromatic or partially aromatic ring system. Preferred aryl groups include, but are not limited to, phenyl, naphthyl, tolyl and xylyl.
"Cycloalkyl" means a non-aromatic, partially or completely saturated cyclic aliphatic hydrocarbon group containing 3 to 8 atoms. Examples of cycloalkyl groups include cyclopropyl, cyclopentyl and cyclohexyl. "Effective amount" or "therapeutically effective amount" means an amount of at least one compound for formula I, or a pharmaceutically acceptable salt thereof, that significantly inhibits tumor growth.
"Halogen" means fluorine, chlorine, bromine or iodine, preferably chlorine or fluorine.
"Hetero atom" means an atom selected from N, O and S, preferably N. If the hetero atom is N, it can be present as -NH- or -N-lower alkyl-. If the hetero atom is S, it can be present as S, SO or SO
"Heteroaryl" means an aromatic heterocyclic ring system containing up to two rings. Preferred heteroaryl groups include, but are not limited to, thienyl, furyl, indolyl, pyrrolyl, pyridinyl, pyrazinyl, oxazolyl, thiazolyl, quinolinyl, pyrimidinyl, imidazole and tetrazolyl.
"Heterocycle" or "heterocyclyl" means a 3- to 10-membered saturated or partially unsaturated non-aromatic monovalent cyclic radical having from one to 3 hetero atoms selected from nitrogen, oxygen or sulfur or a combination thereof. Examples of preferred heterocycles are piperidine, piperazine, pyrrolidine, and morpholine.
"Hydroxy" is a prefix indicating the presence of a monovalent OH group.
"IC50" refers to the concentration of a particular compound according to the invention required to inhibit 50% of a specific measured activity. IC50 can be measured, inter alia, as is described in Example 22, infra.
"Pharmaceutically acceptable salt" refers to conventional acid- addition salts or base-addition salts that retain the biological effectiveness and properties of the compounds of formula I and are formed from suitable non-toxic organic or inorganic acids or organic or inorganic bases. Sample acid-addition salts include those derived from inorganic acids such as hydrochloric acid, hydrobromic acid, hydroiodic acid, sulfuric acid, sulfamic acid, phosphoric acid and nitric acid, and those derived from organic acids such as p-toluenesulfonic acid, salicylic acid, methanesulfonic acid, oxalic acid, succinic acid, citric acid, malic acid, lactic acid, fumaric acid, and the like. Sample base-addition salts include those derived from ammonium, potassium, sodium and, quaternary ammonium hydroxides, such as for example, tetramethylammonium hydroxide. The chemical modification of a pharmaceutical compound (i.e. drug) into a salt is a technique well known to pharmaceutical chemists to obtain improved physical and chemical stability, hygroscopicity, flowability and solubility of compounds. See, e.g., H. Ansel et. al., Pharmaceutical Dosage Forms and Drug Delivery Systems (6th Ed. 1995) at pp. 196 and 1456-1457.
"Pharmaceutically acceptable" such as pharmaceutically acceptable carrier, excipient, etc., means pharmacologically acceptable and substantially non-toxic to the subject to which the particular compound is administered.
"Substituted" as in substituted alkyl, means that the substitution can occur at one or more positions and, unless otherwise indicated, that the substituents at each substitution site are independentiy selected from the specified options.
In one embodiment, the invention relates to compounds of formula
Figure imgf000012_0001
or pharmaceutically acceptable salts thereof, wherein
R1 is selected from the group
H,
Cno alkyl,
Ci-io alkyl substituted by up to three groups selected from aryl, cycloalkyl, heteroaryl, heterocycle, NR10Rπ, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2) wherein the aryl, cycloalkyl, heteroaryl, and heterocycle groups may each independently be substituted by up to three groups selected from NR10Rπ, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2)
aryl, aryl substituted by up to three groups selected from lower alkyl, NR10Rπ, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2>
heteroaryl,
heteroaryl substituted by up to three groups selected from lower alkyl, NR10R ,
OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2,
heterocycle,
heterocycle substituted by up to three groups selected from lower alkyl, NR10Rπ, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2,
C3-10 cycloalkyl,
C3-10 cycloalkyl substituted by up to three groups selected from lower alkyl NR10Rπ, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2RI3, CN and NO2,
C2-ιo alkenyl,
C2-ιo alkenyl substituted by up to three groups selected from NR10Rn, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2, and
C2-ιo alkynyl, substituted by up to three groups selected from NR10Rn, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2;
R , R and R are independently selected from the group consisting of
H,
halogen,
COR13,
CO2R13,
CONR13R14,
SO2NR13R14, SO2R13,
CN, and
NO2,
R5, R6, R7and R8 are independentiy selected from the group
H,
lower alkyl,
lower alkyl substituted by hydroxy or alkoxy,
NR15R16,
OH,
OR17,
SR17,
halogen,
COR17,
CO2R 17
CONR17R18,
SO2NR17R18,
SOR17,
SO2R17, and
CN;
R9 is selected from the group
H,
Figure imgf000015_0001
COR17;
R , 10 an .dA τR> 11 are independently selected from the group
H,
COR13,
CO2R13,
CONR13R14,
SO2R13,
SO2NR13R14,
lower alkyl,
lower alkyl substituted by hydroxy, alkoxy or NR15R16,
cycloalkyl,
cycloalkyl substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
heterocycle, and
heterocycle substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
or, alternatively, NR10Rn can form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms and being optionally substituted by the group consisting of one or more lower alkyl, OR12, COR13, CO2R13, CONR13R14, SOR13, SO2R13, and SO2NR13R14;
R12 is selected from the group
H,
lower alkyl,
COR13, CONR13R14,
C2-6 alkyl substituted by hydroxy, alkoxy, or NR15R, cycloalkyl,
cycloakyl substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
heterocycle, and
heterocycle substituted by hydroxy, alkoxy, lower alkyl, or NR15R16;
R13 and R14 are independently selected from the group
H,
lower alkyl,
C2-6 alkyl substituted by hydroxy, alkoxy, or NR15R16,
cycloalkyl,
cycloalkyl substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
heterocycle, and
heterocycle substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
or , alternatively, NR13R14 can form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms and being optionally substituted by the group consisting of one or more lower alkyl, OR17, COR17, CO2R17, CONR17R18, SO2R17, and SO2NR17R18;
R 5 is selected from the group
H,
lower alkyl,
COR17, and
CO2R17; and
R16, R17 and R18 are independently selected from the group
H, and
lower alkyl, or, alternatively, NR15R16 and NR17R18 can each independently form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms;
R and R2 are independently selected from the group
H, and
lower alkyl; and
R .21 is selected from
lower alkyl, and
C2-6 alkyl substituted by hydroxy, alkoxy or NR15R16.
Compounds disclosed herein and covered by formula I above may exhibit tautomerism or structural isomerism. It is intended that the invention encompasses any tautomeric or structural isomeric form of these compounds, or mixtures of such forms (e.g. racemic mixtures), and is not limited to any one tautomeric or structural isomeric form depicted in formula I above.
When the compounds of formula I exhibit structural isomerism, the preferred optical isomer is depicted by formula la below
Figure imgf000017_0001
In a preferred embodiment, the invention relates to a compound of formula I wherein R1 is selected from aryl, and aryl substituted by OR12 or CONR13R14 . Especially preferred are those compounds, wherein aryl is phenyl.
In another preferred embodiment of the compounds of formula I, R1 is selected from lower alkyl and C2-6 alkyl substituted by OR12 or CONR13R14.
In another preferred embodiment of the compounds of formula I, R2 is H.
In another preferred embodiment of the compounds of formula I, R2 and R3 are H.
In another preferred embodiment of the compounds of formula I, R2, R3 and R are H.
In another preferred embodiment of the compounds of formula I, R is halogen, preferably F.
In another preferred embodiment of the compounds of formula I, R , R and R are H and R7 is O-lower alkyl, preferably O-CH3.
In another preferred embodiment of the compounds of formula I, R5 is halogen, preferably F.
In another preferred embodiment of the compounds of formula I, R is H.
The following compounds are preferred embodiments according to the present invention:
(±)-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one (Example lg);
3 - (4-methoxy-phenyl) -4- (R) -methyl- 1 -phenyl- 7-phenylamino- 3 ,4-dihydro - 1 H- pyrimido[4,5-d]pyrimidin-2-one (Example 2);
3-(4-methoxy-phenyl)-4-(S)-methyl-l-phenyl-7-phenylamino-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one (Example 3); (±)-l,3-bis-(4-methoxy-phenyl)-4-methyl-7-phenylamino-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one (Example 4b);
(±)-3-[3-(4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro-2H- pyrimido[4,5-d]pyrimidin-l-yl]-benzonitrile (Example 5b);
(±)-3-[3-(4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro-2H- pyrimido[4,5-d]pyrimidin-l-yl]-benzamide (Example 6); (±)-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4-dihydro- lH-pyrimido[4,5-d]pyrimidin-2-one (Example 8d);
(±)-3-[3-(2-fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro- 2H-pyrimido[4,5-d]pyrimidin-l-yl]-benzonitrile (Example 9b); (±)-3-[3-(2-fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro- 2H-pyrimido[4,5-d]pyrimidin-l-yl]-benzamide (Example 10);
(±)-3-(2-chloro-5-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4-dihydro- lH-pyrimido[4,5-d]pyrimidin-2-one (Example 12c); l-(2-hydroxy-l-(S)-methyl-ethyl)-3-(4-methoxy-phenyl)-4-methyl-7-phenylamino-3,4- d ydro-lH-pyrimido [4,5-d] pyrimidin-2-one (example 13d); l-(2-hydroxy-l-(R)-methyl-ethyl)-3-(4-methoxy-phenyl)-4-(R)-methyl-7- phenylamino-3,4-dihydro- lH-pyrimido [4,5-d] pyrimidin-2-one (Example 14f); l-(2-hydroxy-l-(R)-methyl-ethyl)-3-(4-methoxy-phenyl)-4-(S)-methyl-7-phenylamino- 3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 15b); 3-(4-methoxy-phenyl)-4-methyl-7-phenylammo-l-[l-(S)-phenyl-ethyl]-3,4-dihydro- lH-pyrimido [4,5-d] pyrimidin-2-one (Example 18);
(±)-N-[6-(4-methoxy-phenyl)-5-methyl-7-oxo-8-phenyl-5,6,7,8-tetrahydro- pyrimido[4,5-d]pyrimidin-2-yl]-N-phenyl-acetamide (Example 19);
(±) - 1 - ( trans-4-hydroxy-cyclohexyl) -3- (4-methoxy-phenyl)-4-methyl-7-phenylamino- 3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 20b); l-[(lR,3R)-3-hydroxy-cyclopentyl]-3-(4-methoxy-phenyl)-4-(S)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one (Example 21a); l-[(lS,3S)-3-hydroxy-cyclopentyl]-3-(4-methoxy-phenyl)-4-(S)-methyl-7-phenylamino- 3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 21b); 7-(4-fluoro-phenylamino)-l-[(lR,3R)-3-hydroxy-cyclopentyl)]-3-(4-methoxy-phenyl)- 4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 21c);
7- (4-fluoro-phenylamino) - 1 - [ ( 1S,3S) -3-hydroxy-cyclopentyl) ] -3 - (4-methoxy-phenyl) - 4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 2 Id);
7-(4-fluoro-phenylamino)-l-(2-hydroxy-l-(R)-methyl-ethyl)-3-(4-methoxy-phenyl)-4- (S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 21e);
3-(4-chloro-phenyl)-7-(4-fluoro-phenylammo)-l-(2-hydroxy-l-(R)-methyl-ethyl)-4- (S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 2 If); 3-(4-chloro-2-fluoro-phenyl)-7-(4-fluoro-ρhenylamino)-l-(2-hydroxy-l-(R)-methyl- ethyl)-4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 21g);
3-(4-chloro-phenyl)-l-(2-hydroxy-l-(R)-methyl-ethyl)-4-(S)-methyl-7-phenylamino- 3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 21h); 3-(4-chloro-2-fluoro-phenyl)-l-(2-hydroxy-l-(R)-methyl-ethyl)-4-(S)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one (Example 21 i);
3-(4-chloro-phenyl)-l-(3-hydroxy-2-(S)-methyl-propyl)-4-(S)-methyl-7-phenylamino- 3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 21j); and
3-(4-chloro-2-fluoro-phenyl)-l-(3-hydroxy-2-(S)-methyl-propyl)-4-(S)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one (Example 21k).
The compounds of the invention are selective for FGF and KDR kinases. These compounds are useful in the treatment or control of cancer, in particular the treatment or control of solid tumors, specifically breast, lung, colon and prostate tumors. These compounds are highly permeable to cell membranes and thus possess advantageous bioavailability profiles such as improved oral bioavailability.
In an alternative embodiment, the present invention relates to pharmaceutical compositions comprising at least one compound of formula I, or a pharmaceutically acceptable salt or ester thereof.
These pharmaceutical compositions can be administered orally, for example in the form of tablets, coated tablets, dragees, hard or soft gelatin capsules, solutions, emulsions or suspensions. They can also be administered rectally, for example, in the form of suppositories, or parenterally, for example, in the form of injection solutions.
The pharmaceutical compositions of the present invention comprising compounds of formula I, and/ or the salts thereof, ma be manufactured in a manner that is known in the art, e.g. by means of conventional mixing, encapsulating, dissolving, granulating, emulsifying, entrapping, dragee-making, or lyophilizing processes. These pharmaceutical preparations can be formulated with therapeutically inert, inorganic or organic carriers. Lactose, corn starch or derivatives thereof, talc, steric acid or its salts can be used as such carriers for tablets, coated tablets, dragees and hard gelatin capsules. Suitable carriers for soft gelatin capsules include vegetable oils, waxes and fats. Depending on the nature of the active substance, no carriers are generally required in the case of soft gelatin capsules. Suitable carriers for the manufacture of solutions and syrups are water, polyols, saccharose, invert sugar and glucose. Suitable carriers for injection are water, alcohols, polyols, glycerine, vegetable oils, phospholipids and surfactants. Suitable carriers for suppositories are natural or hardened oils, waxes, fats and semi-liquid polyols.
The pharmaceutical preparations can also contain preserving agents, solubilizing agents, stabilizing agents, wetting agents, emulsifying agents, sweetening agents, coloring agents, flavoring agents, salts for varying the osmotic pressure, buffers, coating agents or antioxidants. They can also contain other therapeutically valuable substances, including additional active ingredients other than those of formula I.
The present invention is further directed to the use of a compound of formula I for treating cancer, in particular breast, colon, lung and prostate cancer, by administering to a human patient in need of such therapy an effective amount of a compound of formula I and/or its salt.
As mentioned above, the compounds of the present invention, including the compounds of formula I, are useful in the treatment or control of cell proliferative disorders, in particular oncological disorders. These compounds and formulations containing said compounds are particularly useful in the treatment or control of solid tumors, such as, for example, breast, colon, lung and prostate tumors. Thus, the present invention is further directed to a method for treating such solid tumors by administering to a patient in need of such therapy an effective amount of a compound of formula I and/ or its salt.
A therapeutically effective amount of a compound in accordance with this invention means an amount of compound that is effective to prevent, alleviate or ameliorate symptoms of disease or prolong the survival of the subject being treated. Determination of a therapeutically effective amount is within the skill in the art.
The therapeutically effective amount or dosage of a compound according to this invention can vary within wide limits and may be determined in a manner known in the art. Such dosage will be adjusted to the individual requirements in each particular case including the specific compound(s) being administered, the route of administration, the condition being treated, as well as the patient being treated. In general, in the case of oral or parenteral administration to adult humans weighing approximately 70 kg, a daily dosage of about 10 mg to about 10,000 mg, preferably from about 200 mg to about 1,000 mg, should be appropriate, although the upper limit may be exceeded when indicated. The daily dosage can be administered as a single dose or in divided doses, or for parenteral administration, it maybe given as continuous infusion.
In another embodiment, the invention is directed to a process for the preparation of a compound of formula I of claim 1, which process comprises a) reacting a compound of the formula
Figure imgf000022_0001
wherein R1, R5, R6, R7 and R8 are as defined in claim 1, with an aniline derivative of the formula
Figure imgf000022_0002
wherein R , R and R are as defined in claim 1, to obtain a compound of the formula
Figure imgf000022_0003
wherein R9 is H, and if desired,
b) reacting the compound of tain
a compound of formula I, wherein
Figure imgf000022_0004
wherein R , 17 , τ R.19 , R τ)20 and j τ R.21 are as defined in claim 1,
and/ or c) if desired, converting the compound of formula I into a pharmaceutically acceptable salt. The present invention is also directed to the following novel intermediates useful in the synthesis of compounds of formula I:
(±)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-(4-methoxy-phenyl)-amine (Example Id);
(±)-7-chloro-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH-pyrimido[4,5- d]pyrimidin-2-one (Example le);
(+)-{2-chloro-5-[l-(4-methoxy-phenylamino)-ethyl]-pyrimidin-4-yl}-(4-methoxy- phenyl)- amine (Example If);
(±)-7-chloro-l,3-bis-(4-methoxy-phenyl)-4-methyl-3,4-dihydro-lH-pyrimido[4,5- d]pyrimidin-2-one (Example 4a);
(±)-3- [7-chloro-3-(4-methoxy-phenyl)-4-methyl-2-oxo-3,4-dihydro-2H-pyrimido [4,5- d]pyrimidin-l-yl]-benzonitrile (Example 5a);
(+)- [ l-(2,4-dichloro-pyrimidin-5-yl)-ethyl] -(2-fluoro-4-methoxy-phenyl)-amine (Example 8b);
(+)-7-chloro-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one (Example 8c);
(±)-3-[7-chloro-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-3,4-dihydro-2H- pyrimido[4,5-d]pyrimidm-l-yl]-benzonitrile (Example 9a);
(+)-(2-chloro-5-methoxy-phenyl)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl] -amine (Example 12a);
(±)-7-cUoro-3-(2-cMoro-5-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one (Example 12b);
l-[2-(tert-butyl-diphenyl-silanyloxy)-l-(S)-methyl-ethyl]-7-chloro-3-(4-methoxy- phenyl)-4-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 13c);
3- [2-terf-butyl-diphenyl-silanyloxy- 1 - (R) -methyl-ethyl] - 1- (R) - [ 1 - (2,4- dichloropyrimidin-5-yl)-ethyl]-l-(4-methoxyphenyl)-urea (Example 14c);
3 - [2-fer f-butyl-diphenyl-silanyloxy- 1 - (R) -methyl-ethyl] - 1 - (S)- [ 1 - (2,4- dichloropyrimidin-5-yl)-ethyl] -l-(4-methoxyphenyl)-urea (Example 14d);
l-[2-(tert-butyl-diphenyl-silanyloxy)-l-(R)-methyl-ethyl]-7-chloro-3-(4-methoxy- phenyl)-(R)-4-methyl-3,4-dihydro-lH-pyrimido [4,5-d]pyrimidin-2-one (Example 14e); l-[2-(tert-butyl-diphenyl-silanyloxy)-l-(R)-methyl-ethyl]-7-chloro-3-(4-methoxy- phenyl)-4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (Example 15a);
l-[l-(2,4-dichloro-pyrimidm-5-yl)-ethyl]-l-(4-methoxy-phenyl)-3-[l-(S)-phenyl- ethyl]-urea (Example 16); and
7-chloro-3- (4-methoxy-phenyl) -4-methyl- 1 - [ 1 - (5) -phenyl-ethyl) -3,4-dihydro- 1H- pyrimido[4,5-d]pyrimidin-2-one (Example 17).
The compounds of the present invention can be prepared by any conventional means. Suitable processes for synthesizing these compounds are provided in the examples. Generally, compounds of formula I can be prepared according to the below described synthetic route.
Scheme 1
Figure imgf000024_0001
Scheme 2
Figure imgf000024_0002
Scheme 3
Figure imgf000024_0003
Scheme 4
Figure imgf000024_0004
Examples
The following examples illustrate preferred methods for synthesizing the compounds and formulations of the present invention.
Example 1
Example la
(±)-l-(2,4-Dichloro-pyrimidin-5-yl)-ethanol
Figure imgf000025_0001
193.03
(+)-l-(2,4-Dichloro-pyrimidin-5-yl)-ethanol was synthesized from 2,4- dichloropyrimidine (Aldrich) according to the literature procedure of Pie, N.; Turck, A.; Martin, P.; Barbey, S.; Queguiner, G. Tet. Lett, 1993 (34), 1605-1608.
Example lb
(+) -2,4-Dichloro-5 -( 1 -chloroethyl) -pyrimidine
Figure imgf000025_0002
211.48
To a solution of (±)-l-(2,4-dichloro-pyrimidin-5-yl)-ethanol (1.27 g, 6.60 mmol) (from Example la supra) in phosphorus oxychloride (5.0 mL, 53.11 mmol) (Aldrich), at 0 °C, was added diisopropylethyl-amine (2.60 mL, 14.78 mmol) (Aldrich). The reaction was stirred at 0 °C for 5 minutes, at ambient temperature for 15 minutes and then at 115 °C for 3 hours. The reaction was cooled to room temperature, diluted with toluene ( 10 mL) and the mixture was then poured into ice (15 g). After stirring for 10 minutes, the layers were separated and the aqueous extract was back washed with toluene. The combined organic extracts were dried over anhydrous sodium sulfate, filtered, and concentrated. Purification by flash chromatography (Biotage, 40M, 10:90 to 15:85 ethyl acetate - hexanes gradient) gave (±)-2,4-dic__loro-5-(l-chloroethyl)-pyrimidine as an oil. (Yield 1.233 g; 88.3%). Example lc
(±)-2,4-Dichloro-5-(l-bromoethyl)-pyrimidme
Figure imgf000026_0001
255.93
A solution of (±)-l-(2,4-dichloro-pyrimidin-5-yl)-ethanol (0.50 g; 2.60 mmol)
(from Example la supra) and diisopropylethylamine (1.10 mL; 6.25 mmol) (Aldrich) in dibromomethane (0.35 mL) was cooled to 15 °C. Phosphorus oxybromide (0.73 g; 2.83 mmol) was added in one portion. Cooling bath was removed and reaction mixture was stirred at room temperature. After 20 minutes, the reaction was diluted with ethyl acetate and water. The organic phase was washed with brine and then dried over anhydrous sodium sulfate, filtered and concentrated to give crude (+)-2,4-dichloro-5-(l- bromoethyl) -pyrimidine (0.61 g; 91.4%). Purification by flash chromatography (Biotage, 40M, 10:90 ethyl acetate - hexanes) gave pure (+)-2,4-dichloro-5-(l-bromoethyl)- pyrimidine as an oil which solidified when stored in refrigerator.
Alternatively (±)-2,4-dichloro-5-( l-bromoethyl)-pyrimidine was prepared as follows.
Ethyl 2-formylbutyrate
Figure imgf000026_0002
A solution of diisopropylamine (120.6 mL, 0.86 mol) (Aldrich) in tetrahyrofuran (370 mL) was cooled to -30 °C. π-Butyllithium (2.5 M in hexanes, 344.2 mL, 0.86 mol) (Aldrich) was added dropwise at such a rate that the reaction mixture temperature was kept between -30 to 0 °C. The reaction mixture was then cooled to -75 °C in a dry ice - acetone bath. A solution of ethyl butyrate (100 g, 0.86 mol) (Aldrich) in tetrahydrofuran (170 mL) was added dropwise over 28 minutes and keeping the reaction temperature between -75 to -70 °C. The mixture was stirred at the same temperature for an additional 30 minutes. Ethyl formate (125 mL, 1.55 mol) (Aldrich) was then added to this mixture over 25 minutes and maintaining the temperature between -75 to -70 °C. The resultant mixture was allowed to warm to room temperature and stirred at room temperature for 3 hours. With external cooling in a cold water bath to keep the reaction temperature below 30 °C acetic acid (98.55 mL, 1.72 mol) was added, followed by water (430 mL) and dichloromethane (200 mL). After separating the layers, the organic layer was washed with water (300 mL). The combined water layer was extracted with dichloromethane (200 mL). The combined organic layer was washed with aqueous sodium bicarbonate solution (200 mL). The basic aqueous solution was extracted with dichloromethane (100 mL). All organic layers were then combined, dried over sodium sulfate over night, filtered and distilled to remove solvent leaving about 180 mL. (Some of the product was distilled over with tetrahydrofuran.) The residue was distilled at 65 - 81 °C (23 mm Hg). The fraction distilling over at 70 - 81 °C (23 mm Hg) gave ethyl 2- formylbutyrate. (Yield 68.35 g, 55.1%).
5 -Ethyl uracil
Figure imgf000027_0001
Urea (19.39 g, 0.32 mol) (J. T. Baker) was added over 20 minutes to fuming sulfuric acid (26 - 29.5% free SO3, 135 mL, 2.65 mol) (Aldrich) with cooling in an ice water bath maintaining the reaction temperature between 8 to 15 °C. After stirring for an additional 30 minutes, ethyl 2-formylbutyrate (46.55 g, 0.32 mol) (from Example lc, supra) was added over 18 minutes keeping the reaction at the same temperature. After stirring for another 30 minutes, a second portion of urea (15.07 g, 0.25 mol) was added over 10 minutes at the same temperature. The reaction mixture was then stirred at room temperature for 65 hours, and at 90 - 100 °C for 2 hours (gas evolution was observed, and reaction was exothermic, with reaction temperature rising to 110 °C). The mixture was cooled to 30 °C with an ice - water, bath. Ice (270 g) was added slowly keeping the reaction below 35 °C. The mixture was then cooled to 5 °C and stirred for 20 minutes. The solid formed was collected by filtration, washed with cold water, hexanes, and diethyl ether and dried by suction to give 5-ethyl uracil. (Yield 38.85 g, 85.9%).
2,4-Dichloro-5-ethylpyrimidine
Figure imgf000027_0002
N,_ "-Diisopropylethylamine (195 mL, 0.86 mol) (Aldrich) was added slowly to a mixture of 5-ethyl uracil (52.3 g, 0.37 mol) (from Example lc, supra) and phosphorous oxychloride (150 mL, 1.61 mol) (Aldrich) with external cooling in a cold water bath. The mixture was heated at reflux for 3.8 hours and cooled to room temperature. Mixture was then poured into ice (300 g). Ethyl acetate (100 mL) was added and mixture stirred at 20 °C for 30 minutes with cooling in an ice - water bath. The resulting mixture was filtered through Celite® and the filtrate extracted with ethyl acetate - hexanes (1:1, 3 X 300 mL). The combined organic layers was washed with water (250 mL), dried over sodium i sulfate, filtered and concentrated to dryness. This residue was dissolved in ethyl acetate - hexanes (1:1) and filtered through TLC grade silica gel and eluting with the same solvent. The filtrate was concentrated to dryness to give 2,4-dichloro-5-ethyl-pyrimidine. (Yield 56.3 g, 85.2%).
(±)-2,4-Dichloro-5- ( 1 -bromoethyl) -pyrimidine
Figure imgf000028_0001
N-Bromosuccimimide (64.2 g, 0.35 mol) (Aldrich) and 2,2'-azo-Hs-isobutyro- nitrile (AIBN, 1.78 g) (Aldrich) were added to a solution of 2,4-dichloro-5-ethyl- pyrimidine (56.3 g, 0.32 mol) (from Example lc, supra) in carbon tetrachloride (400 mL). The mixture was heated at reflux for 1.5 hours and cooled to room temperature. Reaction mixture was filtered through TLC grade silica gel and eluted with ethyl acetate hexanes (1:8). The filtrate was concentrated to dryness to give (+)-2,4-dichloro-5-(l- bromoethyl) -pyrimidine. (Yield 81.3 g, 100%).
Example Id
(±)-[l-(2,4-Dichloro-pyrimidin-5-yl)-ethyl]-(4-methoxy-phenyl)-amine
Figure imgf000028_0002
298.17
(±)-2,4-Dichloro-5-(l-bromoethyl)-pyrimidine (1.97 g; 7.70 mmol) (from Example lc supra) was dissolved in acetonitrile (21 mL). p-Anisidine (0.95 g; 7.70 mmol) (Aldrich), potassium carbonate (1.17 g; 8.48 mmol) and potassium iodide (0.32 g; 1.93 mmol) were added and the mixture was stirred at room temperature. After 16 hours, the mixture was partitioned between ethyl acetate and water. The organic phase was washed with water and brine, dried over anhydrous sodium sulfate, filtered and concentrated. Purification by flash chromatography (Biotage 40M, 20:80 to 25:75 ethyl acetate - hexanes gradient) gave (±)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-(4- methoxy-phenyl) -amine. (Yield 1.82 g; 76.3%). Example le
(±)-7-Chloro-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH- pyrimido [4,5-d]pyrimidin-2-one
Figure imgf000029_0001
380.84
To a solution of (±)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-(4-methoxy-phenyl)- amine (0.14 g; 0.46 mmol) (from Example lc supra) in toluene (1 mL) was added phenyl isocyanate (50 μL; 0.46 mmol) (Aldrich). The solution was heated in an oil bath at 110 °C. After 1 hour, a small amount of starting pyrimidine remained. An additional portion of phenyl isocyanate (7.5 μL; 0.07 mmol) was added and the mixture heated for an additional 15 minutes. Upon cooling to room temperature, the reaction was concentrated. The residue was triturated with hexanes and then dried briefly under high vacuum.
This solid residue (intermediate urea) was dissolved in freshly distilled tetrahydrofuran (1 mL), cooled to -3 °C and treated with potassium tert-butoxide (1.0 M in tetrahydrofuran; 0.5 mL; 0.5 mmol) (Aldrich). After 15 minutes in the cold, the reaction mixture was filtered through a silica gel pad (2.9 g silica) and washed with 1:1 ethyl acetate - hexanes and then ethyl acetate. The filtrates were combined and concentrated. Purification by flash chromatography (Biotage, 40S, 35:65 to 50:50 ethyl acetate - hexanes gradient) gave (±)-7-chloro-3-(4-methoxy-phenyl)-4-methyl-l-phenyl- 3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one as a solid. (Yield 0.14 g; 77.7%).
Example If
(+)-{2-Chloro-5-[l-(4-methoxy-phenylamino)-ethyl]-pyrimidin-4-yl}-(4- methoxy-phenyl) - amine
Figure imgf000030_0001
384.87
(+)-2,4-Dichloro-5-(l-chloroethyl)-pyrimidine (0.41 g; 1.94 mmol) (from Example lb supra) was dissolved in acetonitrile (2 mL). p-Anisidine (0.25 g; 2.03 mmol) (Aldrich), potassium carbonate (0.30 g; 2.19 mmol) and potassium iodide (0.04 g; 0.23 mmol) were added and the mixture was stirred at room temperature. After 40 hours, the mixture was partitioned between ethyl acetate and water. The organic phase was washed with water and brine, dried over anhydrous sodium sulfate, filtered and concentrated. Purification by flash chromatography (Biotage 40M, 20:80 to 50:50 ethyl acetate - hexanes gradient) gave (±)-{2-chloro-5-[l-(4-methoxy-phenylamino)-ethyl]-pyrimidin- 4-yl}-(4-methoxy-phenyl)-amine. (Yield 0.19 g; 25.9%).
Example lg
(±)-3-(4-Methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4-dihydro-lH- pyrimido [4,5-d]pyrimidin-2-one
Figure imgf000030_0002
437.51
(+)-7-Chloro-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH- pyri_ιudo[4,5-d]pyrimidin-2-one (0.13 g; 0.33 mmol) (from Example le supra) was combined with aniline (100 μL; 1.10 mmol) (Aldrich). The mixture was heated to 110 °C. A clear solution resulted upon heating and then a new solid precipitated out of solution. Reaction mixture was cooled to room temperature after 45 minutes. The residue was triturated with hexanes and then purified by flash chromatography (Biotage, 40M, 40:60 to 50:50 ethyl acetate - hexanes gradient ) to give (+)-3-(4-methoxy-phenyl)- 4-methyl-l-phenyl-7-phenylamino-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one as an off-white solid, after crystallization from ethyl acetate - hexanes. (Yield 21.6 mg; 14.8%). A substantial amount of (±)-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-7- phenylammo-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one adhered to the silica and was eluted with 50:50 ethyl acetate - methanol. (Yield 88 mg; 60%). Melting Point: 222 - 234 °C.
HR-MS(ES+) m/z Calculated for C26H23N5O2 [(M+H)+]: 438.1925. Found: 438.1927
Example 2
3 - (4-Methoxy-phenyl) -4- {R) -methyl- 1 -phenyl-7-phenylamino- 3 ,4-dihydr o- 1H- pyrimido [4,5-d]pyrimidin-2-one
Figure imgf000031_0001
437.51
The racemic (±)-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4- dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one (from Example lg supra) was resolved on a Chiracel OD column (1.0 x 25 cm) in multiple runs. Th first eluting peak gave 3-(4- methoxy-phenyl) -4- (R)-methyl- 1 -phenyl-7-phenylamino-3,4-dihydro- 1H- pyrimido [4,5-d] pyrimidin-2-one. Melting Point: 218 - 233 °C.
Example 3
3-(4-Methoxy-phenyl)-4-(S)-methyl-l-phenyl-7-phenylamino-3,4-dihydro-lH- pyrimido [4,5-d]pyrimidin-2-one
Figure imgf000031_0002
437.51 The racemic (±)-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4- dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one (from Example lg supra) was resolved on a Chiracel OD column (1.0 x 25 cm) in multiple runs. The second eluting peak gave 3- (4-methoxy-phenyl)-4-(S)-methyl-l-phenyl-7-phenylamino-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one. Melting Point: 223 - 236 °C.
Example 4a
(±)-7-Chloro-l,3-bis-(4-methoxy-phenyl)-4-methyl-3,4-dihydro-lH- pyrimido [4,5-d]pyrimidin-2-one
Figure imgf000032_0001
410.86
A solution of (+)-{2-chloro-5-[l-(4-methoxy-phenylamino)-ethyl] -pyrimidin-4- yl}- (4-methoxy-phenyl) -amine (49.4 mg; 0.13 mmol) (from Example If supra) in dichloromethane (1.5 mL) was cooled in an ice - water bath. To this solution was added triethylamine (0.18 mL; 1.29 mmol) (Aldrich), followed by phosgene solution (1.89 M, 0.34 mL; 0.64 mmol) (Fluka). After two hours in the cold, the reaction was diluted with additional dichloromethane and washed sequentially with water, dilute aqueous hydrochloric acid, dilute aqueous sodium bicarbonate, and brine. The organic layer was then dried over anhydrous sodium sulfate and concentrated. Residue was purified by flash chromatography (Biotage,12M, 40:60 ethyl acetate - hexanes as solvent) to give (+)- 7-chloro-l,3-bis-(4-methoxy-phenyl)-4-methyl-3,4-dihydro-lH-pyrimido[4,5- d]pyrimidin-2-one as a white solid. (Yield 42.6 mg; 79.2%). Example 4b
(+)- 1 ,3 -Bis- (4-methoxy-phenyl) -4-methyl- 7-phenylamino - 3 ,4- dihydro- 1H- pyrimido [4,5-d]pyrimidin-2-one
Figure imgf000033_0001
467.53
The mixture of (±)-7-cr_loro-l,3-bis-(4-methoxy-phenyl)-4-methyl-3,4-dihydro- lH-pyrimido [4,5-d] pyrimidin-2-one (0.30 g; 0.72 mmol) (from Example 4a supra) and aniline (0.20 mL; 2.16 mmol) (Aldrich) was heated at 100 °C for 40 minutes. The mixture was then cooled to room temperature and triturated with hexanes. The resulting solid was dissolved in dichloromethane, washed with water and brine, dried over sodium sulfate and concentrated. The residue was purified by flash chromatography (Biotage, 12S, dichloromethane followed by 30:70 to 50:50 ethyl acetate - hexanes gradient) to give (+)-l,3-bis-(4-methoxy-phenyl)-4-methyl-7-phenylamino-3,4-dihydro-lH- pyrimido [4,5-d] pyrimidin-2-one. (Yield 0.303g; 90.1%).
The material purified by chromatography was combined with comparable material from another experiment. The combined lot was recrystallized from dichloromethane - ethyl acetate - hexanes to yield (±)-l,3-bis-(4-methoxy-phenyl)-4-methyl-7- phenylammo-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one as an off-white solid. (Yield 0.39 g; 91%). Melting Point: 228 - 234 °C.
HR-MS(ES+) m/z Calculated for C27H25N5O3 [(M+H)+] : 468.2030. Found: 468.2032.
Example 5a
(±)-3-[7-Chloro-3-(4-methoxy-phenyl)-4-methyl-2-oxo-3,4-dihydro-2H- pyrimido [4,5-d] pyrimidin- 1 -yl] -benzonitrile
Figure imgf000034_0001
405.85
To a solution of (±)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-(4-methoxy-phenyl)- amine (0.10 g; 0.34 mmol) (from Example Id supra) in toluene (1 mL) was added 3- cyanophenyl isocyanate (66.6 mg; 0.46 mmol) (Aldrich). The mixture was heated in an oil bath at 110 °C for two hours. After cooling to room temperature, the reaction was concentrated under reduced pressure. The residue was triturated with hexanes and dried briefly. The solid residue (intermediate urea) was taken up in freshly distilled tetrahydrofuran (1.5 mL), cooled in an ice - brine bath and treated with potassium tert- butoxide (1.0 M in tetrahydrofuran; 370 μL; 0.37 mmol) (Aldrich). After 15 minutes in the cold the reaction was complete by TLC analysis and was filtered through a silica gel pad (0.5 g) and washed with ethyl acetate. The filtrate was concentrated and the residue was purified by flash chromatography (Biotage, 12M, 40:60 ethyl acetate - hexanes) to give (±)-3-[7-chloro-3-(4-methoxy-phenyl)-4-methyl-2-oxo-3,4-dihydro-2H- pyrimido[4,5-d]pyrimidin-l-yl]-benzonitrile as a solid. (Yield 0.13 g; 85.6%).
Example 5b
(±)-3-[3-(4-Methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro-2H- pyrimido [4,5-d] pyrimidin- 1 -yl] -benzonitrile
Figure imgf000034_0002
A mixture of (±)-3- [7-chloro-3-(4-methoxy-phenyl)-4-methyl-2-oxo-3,4-dihydro- 2H-pyrimido [4,5-d] yrimidin- 1-yl] -benzonitrile (0.49 g; 1.21 mmol) (from Example 5a supra) and aniline (0.50 mL; 5.49 mmol) (Aldrich) was heated to 110 °C for one hour. Methanol was added to the hot mixture and the solution was then cooled. The solid that precipitated out of solution was collected and recrystallized from methanol to yield (±)- 3-[3-(4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro-2H- pyrimido[4,5-d]pyrimidin-l-yl]-benzonitrile as a white solid. (Yield 0.35 g; 62.2%). Melting Point: 224 - 228 °C.
HR-MS(ES+) m/z Calculated for C27H22N6O2 ([M+H]+): 463.1877; Found: 463.1883
Example 6
(±)-3-[3-(4-Methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro-2H- pyrimido[4,5-d]pyrimidin-l-yl]-benzamide
Figure imgf000035_0001
480.53
A solution of (+)-3-[3-(4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4- dihydro-2H-pyrimido [4,5-d] pyrimidin- 1-yl] -benzonitrile (0.11 g; 0.22 mmol) (from Example 5b supra) in dimethyl sulfoxide (1.5 mL) was cooled in an ice - water bath. Aqueous sodium hydroxide (1.0 M; 0.38 mL; 0.38 mmol) was added, followed by aqueous hydrogen peroxide (30% solution; 70 μL; 0.69 mmol). The cooling bath was removed following the additions and the mixture was stirred at room temperature for 3 hours. The solid was collected and washed with water and hot dichloromethane. This crude material was purified by flash chromatography (Biotage; 12M; 99:1 to 80:20 ethyl acetate - methanol gradient) and the pure product crystallized out of solution upon concentration to give (±)-3-[3-(4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino- 3,4-dihydro-2H-pyrimido[4,5-d]pyrimidin-l-yl]-benzamide as a white solid. (Yield 64.6 mg; 57.9%). Melting Point: 268 - 273 °C (discolored on melting).
HR-MS(EI) m/z Calculated for C27H24N6O3 [M+] : 480.1910; Found: 480.1912.
Example 7a
(±)-l-(2,4-Dichloro-pyrimidin-5-yl)-propan-l-ol
Figure imgf000036_0001
207.06
Diisopropylamine (1.10 mL; 7.85 mmol) (Aldrich) was dissolved in freshly distilled tetrahydrofuran (15 mL) and cooled to -78 °C. n-Butyllithium (2.5 M in hexanes, 3.10 mL; 7.75 mmol) (Aldrich) was added dropwise and stirring continued for 30 minutes to give a LDA solution. A solution of 2,4-dichloropyrimidine (0.50 g; 3.36 mmol) (Aldrich) in tetrahydrofuran (3 mL) was added to this freshly prepared LDA solution over 12 minutes. After 30 minutes stirring at -78 °C, propionaldehyde (0.48 mL; 6.65 mmol) (Aldrich) was added over 6 minutes and stirring continued for another 35 minutes. The reaction was quenched with the addition of 25% aqueous ammonium chloride solution (15 mL) and was then diluted with ethyl acetate and water. The organic phase was washed with a second portion of ammonium chloride solution and then brine, dried over anhydrous sodium sulfate and concentrated. The residue was purified by flash chromatography (Biotage; 40M; 15:85 to 25:75 ethyl acetate - hexanes gradient) to give (±)-l-(2,4-dichloro-pyrimidin-5-yl)-propan-l-ol. (Yield 0.260g; 37%).
Example 7b
(+)-5-(l-Bromopropyl)-2,4-dichloro-pyrimidine
Figure imgf000036_0002
269.96
A solution of (±)-l-(2,4-dichloro-pyrimidin-5-yl)-propan-l-ol (0.26 g; 1.26 mmol)
(from Example 7a supra) in diisopropylethylamine (0.55 mL; 3.13 mmol) (Aldrich) was cooled slightly (18 °C) to help offset the exothermicity of the reaction. Neat phosphorus oxybromide (0.35 g; 1.36 mmol) (Aldrich) was added in one portion. The cooling bath was removed and reaction mixture stirred at room temperature. After 15 minutes, the reaction mixture was diluted with ice and ethyl acetate. The organic phase was then washed with brine, dried over anhydrous sodium sulfate, filtered and concentrated. Purification by flash chromatography (Biotage 12M; 5:95 ethyl acetate - hexanes) gave crude (±)-5-(l-bromopropyl)-2,4-dichloro-pyrimidine which was used in subsequent steps without further purification. (Yield 0.23 g). The material showed 3 peaks for the pyrimidine ring proton in its NMR spectrum indicating some displacement of the ring chlorines with bromine.
Example 7c
(+)- [ l-(2,4-Dichloro-pyrimidin-5-yl)-propyl] -(4-methoxy-phenyl) -amine
Figure imgf000037_0001
312.20
(±)-5-(l-Bromopropyl)-2,4-dichloro-pyrimidme (0.26 g; 0.96 mmol) (from Example 7b supra) was dissolved in acetonitrile (2.5 mL). p-Anisidine (0.12 g; 0.96 mmol) (Aldrich), potassium carbonate (0.15 g; 1.05 mmol) and potassium iodide (0.04 g; 0.24 mmol) were added and the mixture was stirred at room temperature. After 16 hours, the mixture was partitioned between ethyl acetate and water. The organic phase was washed with water and brine, dried over anhydrous sodium sulfate, filtered and concentrated. Purification by flash chromatography (Biotage 40S, 15:85 to 20:80 ethyl acetate - hexanes gradient) gave crude (±)-[l-(2,4-dichloro-pyrimidin-5-yl)-propyl]-(4- methoxy-phenyl) -amine. (Yield 0.19 g; 64.3%). This material again showed 3 peaks for the pyrimidine ring proton in the same ratio as was seen in the starting material. This material was used without further purification.
Example 7d
(±)-7-Chloro-4-ethyl-3-(4-methoxy-phenyl)- l-phenyl-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000037_0002
394.86
To a solution of (+)-[l-(2,4-dichloro-pyrimidin-5-yl)-propyl]-(4-methoxy- phenyl)-amine (0.19 g; 0.59 mmol) (from Example 7c supra) in toluene (2 mL) was added phenyl isocyanate (83 μL; 0.76 mmol) (Aldrich). The solution was heated in an oil bath at 110 °C for 1 hour. Upon cooling to room temperature, the reaction was concentrated. The residue was triturated with hexanes and then dried briefly under high vacuum. The solid residue (intermediate urea) was dissolved in freshly distilled tetrahydrofuran (2 mL), cooled to -3 °C and treated with potassium tert-butoxide (1.0 M in tetrahydrofuran; 0.65 mL; 0.65 mmol) (Aldrich). After 15 minutes in the cold, the reaction mixture was filtered through a silica gel pad (1 g) and washed with ethyl acetate. The filtrate was concentrated and purified by flash chromatography (Biotage, 40S, 20:80 to 40:60 ethyl acetate - hexanes gradient) to give (±)-7-chloro-4-ethyl-3-(4-methoxy- phenyl)-l-phenyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one as a solid. (Yield 0.14 g; 60.2%). The NMR of this material showed only two singlets for the pyrimidine proton indicating a mixture of the desired product and the corresponding 7-bromo compound.
Example 7e
(+)-4-Ethyl-3-(4-methoxy-phenyl)-l-phenyl-7-phenylamino-3,4-dihydro-lH- pyrimido [4,5d] pyrimidin-2-one
Figure imgf000038_0001
451.53
A mixture of (+)-7-chloro-4-ethyl-3-(4-methoxy-phenyl)-l-phenyl-3,4-dihydro- lH-pyrimido [4,5-d] pyrimidin-2-one (0.13 g; 0.34 mmol) (from Example 7d supra) and aniline (250 μL; 2.74 mmol) (Aldrich) was heated to 110 °C for 30 minutes. Upon cooling, the mixture was triturated and the resulting solid was dissolved in dichloromethane and washed with water and brine. The organic phase was dried over anhydrous sodium sulfate, filtered and concentrated. The crude material was purified by flash chromatography (Biotage, 12M; 35:65 to 50:50 ethyl acetate - hexanes gradient) and then crystallized from ethyl acetate - hexanes to give (+)-4-ethyl-3-(4-methoxy-phenyl)- l-phenyl-7-phenylamino-3,4-dihydro-lH-pyrimido[4,5d]pyrimidin-2-one as a white solid. (Yield 0.11 g; 73.6%).
Melting Point: 172 - 176 °C. HR-MS(ES+) m/z Calculated for C27H25N5O2 ([M+H]+): 452.2081; Found: 452.2083.
Example 8a 2-Fluoro-4-methoxyaniline
Figure imgf000039_0001
3-Fluoro-4-nitrophenol (10.17 g, 64.7 mmol) (Aldrich) was dissolved in dimethylformamide (210 mL). Potassium carbonate (45 g, 323 mmol) and methyl iodide (5 mL, 77.64 mmol) (Aldrich) were added and the reaction mixture was stirred at room temperature overnight, (thin layer chromatography: 20% ethyl acetate in hexanes showed complete conversion). The reaction mixture was filtered through a bed of Celite" , and concentrated under reduced pressure. The crude material was triturated with ether and insoluble materials were removed by filtration. The filtrate was concentrated under reduce pressure to afford an orange solid. This material (11.43 g) was dissolved in methanol (150 mL) and hydrogenated for 1.5 hours in a Parr apparatus at 50 psi, in the presence of 10% palladium on carbon (1.5 g) (Aldrich). (thin layer chromatography: 20% ethyl acetate in hexanes showed complete conversion). The reaction mixture was filtered through Celite" , washed with ethyl acetate, then concentrated under reduced pressure to give 2-fluoro-4-met__oxyanil_ne a solid. (Yield 3.81 g, 26.99 mmol).
Example 8b
(±)-[l-(2,4-Dichloro-pyrimidin-5-yl)-ethyl]-(2-fluoro-4-methoxy-phenyl)-amine
Figure imgf000039_0002
316.16
A mixture of (±)-2,4-dichloro-5-(l-bromoethyl)-pyrimidine (0.20 g; 0.79 mmol) (from Example lc supra), N,N-diisopropylethyl-amine (140 μL; 0.80 mmol) (Aldrich) and 2-fluoro-4-methoxyaniline (0.11 g; 0.78 mmol) (from Example 16a supra) were combined in acetonitrile (3 mL) and stirred at room temperature overnight. The reaction was found to be incomplete and was then heated in an oil bath at 40 - 50 °C overnight. Upon cooling, the reaction was partitioned between ethyl acetate and water. The organic phase was washed with brine, dried over anhydrous sodium sulfate, filtered and concentrated. Purification by flash chromatography (Biotage, 40S; 10:90 to 20:80 ethyl acetate - hexanes gradient) gave (+)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-(2- fluoro-4-methoxy-phenyl) -amine. (Yield 0.12 g; 49.1%). Example 8c
(±)-7-Chloro-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro- lH-pyrimido [4,5-d] pyrimidin-2-one
Figure imgf000040_0001
398.83
(±)-[l-(2,4-Dicr_loro-pyrimidin-5-yl)-ethyl]-(2-fluoro-4-methoxy-phenyl)-amine (0.45 g; 1.41 mmol) (from Example 16b supra) and phenyl isocyanate (165 μL; 1.52 mmol) (Aldrich) were combined in toluene (5 mL) and heated in an oil bath at 110 - 120 °C for 2.5 hours and then at 130 °C for 2.5 hours. After cooling, the reaction mixture was concentrated and triturated with hexanes. The solid residue was purified by flash chromatography (Biotage 40S; 30:70 ethyl acetate - hexanes) to give the intermediate (±)- l-[l-(2-chloro-pyrimidin-5-yl)-ethyl]-l-(2-fluoro-4-methoxy-phenyl)-3-phenyl-urea. (Yield 0.27 g; 43.2%).
This urea was suspended in freshly distilled tetrahydrofuran (3 mL) and cooled in an ice - brine bath. Potassium terf-butoxide (1.0 M in tetrahydrofuran; 0.64 mL; 0.64 mmol) (Aldrich) was added dropwise to the suspension over 5 minutes. The solid went into solution as the potassium tert-butoxide was added. After stirring for an additional 15 minutes in the cold, the reaction mixture was filtered through a bed of silica gel (1.75 g), eluting with 1:1 ethyl acetate - hexanes and then ethyl acetate. Purification by flash chromatography (Biotage 40S; 40:60 to 50:50 ethyl acetate - hexanes) gave (±)-7-chloro- 3-(2-fluoro-4-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH-pyrimido[4,5- d]pyrimidin-2-one. (Yield 0.22 g; 38% overall for two steps).
Example 8d
(±)-3-(2-Fluoro-4-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4- dihydro- lH-pyrimido [4,5-d] pyrimidin-2-one
Figure imgf000041_0001
455.50
(±)-7-Chloro-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH- pyrimido [4,5-d] pyrimidin-2-one (0.21 g; 0.53 mmol) (from Example 16c supra) and aniline (450 μL; 4.94 mmol) (Aldrich) were combined and heated at 110 °C for 1 hour. After cooling, the mixture was triturated with hexanes. The solid residue was dissolved in dichloromethane and washed with water and brine, dried over anhydrous sodium sulfate, filtered and concentrated. Purification by flash chromatography (Biotage 12M; 40:60 to 50:50 ethyl acetate - hexanes gradient) and then crystallization from dichloromethane - ether gave (±)-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4- dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one as a white solid. (Yield 0.20 g; 81.4%).
Melting Point: 242 - 250 °C. HR-MS(ES+) m/z Calculated for C26H22FN5O2 ([M+H]+): 456.1831; Found: 456.1832.
Example 9a
(±)-3-[7-Chloro-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-3,4-dihydro-
2H-pyrimido [4,5-d] pyrimidin- 1 -yl] -benzonitrile
Figure imgf000041_0002
423.84
(±)-[l-(2,4-Dichloro-pyrimidin-5-yl)-ethyl]-(2-fluoro-4-methoxy-phenyl)-amine (1.15 g; 3.63 mmol) (from Example 16b supra) was combined with 3-cyanophenyl isocyanate (0.55 g; 3.81 mmol) (Aldrich) in toluene (10 mL) and heated in an oil bath at 110 - 115 °C for 2 hours and then up to 128 °C over the next 3 hours. Upon cooling to room temperature, the reaction was concentrated and triturated with hexanes. The crude material was purified by flash chromatography (Biotage, 40M; 50:50 ethyl acetate - hexanes) to give the intermediate (+)-l-[l-(2-chloro-pyrimidin-5-yl)-ethyl]-3-(3-cyano- pheny)-l-(2-fluoro-4-methoxy-ρhenyl)- urea. (Yield 1.20 g; 71.8%).
This urea was suspended in freshly distilled tetrahydrofuran (10 mL) and cooled in an ice - brine bath. Potassium tert-butoxide (1.0 M in tetrahydrofuran; 2.70 mL; 2.70 mmol) (Aldrich) was added dropwise to the suspension over 8 minutes. The reaction mixture was stirred for an additional 15 minutes in the cold and then filtered through a bed of silica gel (7 - 8 g), eluting with 1:1 ethyl acetate - hexanes and then ethyl acetate. Purification by flash chromatography (Biotage 40M; 40:60 to 50:50 ethyl acetate - hexanes) gave (+)-3-[7-chloro-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-3,4- dihydro-2H-pyrimido[4,5-d]pyrimidin-l-yl]-benzonitrile as a white solid. (Yield 1.11 g; 66.8% overall for two steps).
Example 9b
(±)-3-[3-(2-Fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4- dihydro-2H-pyrimido[4,5-d]pyrimidin-l-yl] -benzonitrile
Figure imgf000042_0001
480.51
(±)-3-[7-Chloro-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-3,4-dihydro- 2H-pyrimido [4,5-d] pyrimidin- 1-yl] -benzonitrile (1.03 g; 2.42 mmol) (from Example 17a supra) was combined with aniline (1.00 mL; 10.97 mmol) (Aldrich) and heated at 110 °C for 1 hour. At this point, the reaction mixture was a solid mass. Methanol (75 mL) was added and the mixture was heated at 110 °C for 20 minutes with vigorous stirring (solid remained insoluble). Upon cooling, the solid was collected, washed with methanol and then ether and dried under high vacuum to give (±)-3-[3-(2-fluoro-4-methoxy-phenyl)- 4-methyl-2-oxo-7-phenylamino-3,4-dihydro-2H-pyrimido [4,5-d] pyrimidin- 1-yl] - benzonitrile. (Yield 1.00 g; 85.6%). A portion of this material was recrystallized from dichloromethane - ether - petroleum ether for characterization and testing. (Yield 0.22 g).
Melting point: 223 - 228 °C. HR-MS(ES+) m/z Calculated for C27H2ιFN6O2 ([M+H]+): 481.1783; Found: 481.1788. Example 10
(±)-3-[3-(2-Fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4- dihydro-2H-pyrimido [4,5-d] pyrimidin- 1-yl] -benzamide
Figure imgf000043_0001
498.52
(±)-3-[3-(2-Fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4- dihydro-2H-pyrimido[4,5-d]pyrimidin-l-yl]-benzonitrile (0.80 g; 1.67 mmol) (from Example 17b supra) was dissolved in dimethyl sulfoxide (25 mL). Most of the material went into solution. Aqueous sodium hydroxide (1.0 N; 3.34 mL; 3.34 mmol) was added followed by hydrogen peroxide (30% in water; 0.51 mL, 4.99 mmol) at room temperature. After stirring for 45 minutes, water was added and a white solid precipitated out of solution. The solid was collected, washed with water and dried. Dissolution of the solid required significant volumes of dichloromethane - methanol - acetonitrile. The solvent mixture was then distilled off until solid began to crystallize out of solution. Cooling and filtration gave (±)-3-[3-(2-fluoro-4-methoxy-phenyl)-4- methyl-2-oxo-7-phenylamino-3,4-dihydro-2H-pyrimido[4,5-d]pyrimidin-l-yl]- benzamide as a white solid. (Yield 0.56 g; 67.6%).
Melting Point: 282 - 286 °C. HR-MS(ES+) m/z Calculated for C27H23FN6O3 ([M+H]+): 499.1889; Found: 499.1894.
Example 11a
(±)-l-(2,4-Dichloro-pyrimidin-5-yl)-2-methyl-propan-l-ol
Figure imgf000043_0002
221.09
A solution of diisopropylamine (1.1 mL; 7.85 mmol) (Aldrich) and freshly distilled tetrahydrofuran (15 mL) was cooled to -78 °C. n-Butyllithium (2.5M in hexanes; 3.1 mL; 7.75 mmol) (Aldrich) was added dropwise and stirring continued for 40 minutes to prepare a LDA solution. 2,4-Dichloropyrimidine (0.50 g; 3.37 mmol) (Aldrich) in tetrahydrofuran (3 mL) was then added dropwise to this freshly prepared LDA solution over 15 minutes. After stirring for 40 minutes, isobutyraldehyde (0.61 mL; 6.72 mmol) (Aldrich) was added over 6 minutes and stirring continued for another 30 minutes. The reaction was quenched with the addition of 25% aqueous ammonium chloride solution (20 mL) and then diluted with ethyl acetate and water. The organic phase was washed with a second portion of aqueous ammonium chloride solution and then brine, dried over anhydrous sodium sulfate, filtered, and concentrated. The residue was purified by flash chromatography (Biotage 40S; 10:90 to 15:85 ethyl acetate - hexanes gradient) to give (±)-l-(2,4-dichloro-pyrimidin-5-yl)-2-methyl-propan-l-ol. (Yield 0.25 g; 33.4%).
Example lib
(±)-5-(l-Bromo-2-methyl-propyl)-2,4-dichloro-pyrimidine
Figure imgf000044_0001
283.98
(±)-l-(2,4-Dichloro-pyrimidin-5-yl)-2-methyl-propan-l-ol (0.18 g; 0.83 mmol) (from Example 19a supra) was combined with N,N-diisopropyl-ethylamine (0.37 mL; 2.10 mmol) (Aldrich) and a small volume of dibromomethane (50 μL) (Aldrich) to help solubilize the mixture. Only a small amount of material remained insoluble. Neat phosphorus oxybromide (0.22 g; 0.85 mmol) (Aldrich) was added in one portion.
Reaction mixture was stirred for 10 minutes and then partitioned between ethyl acetate and water. The organic phase was washed with brine, dried over anhydrous sodium sulfate, filtered and concentrated. Purification by flash chromatography (Biotage 12M) gave (±)-5-(l-bromo-2-methyl-propyl)-2,4-dichloro-pyrimidine as a colorless oil. (Yield 79.5 mg; 33.7%).
Example lie
(±)-[l-(2,4-Dichloro-pyrimidin-5-yl)-2-methyl-propyl]-(4-methoxy-phenyl)- amine
Figure imgf000044_0002
326.23
(±)-5-(l-Bromo-2-methyl-propyl)-2,4-dichloro-pyrimidine (88.7mg; 0.312 mmol) (from Example 19b supra) was combined with potassium carbonate (47.4 mg; 0.34 mmol), potassium iodide (14.9 mg; 0.09 mmol) and p-anisidine (38.7 mg; 0.31 mmol) (Aldrich) and stirred at room temperature overnight. The reaction mixture was diluted with ethyl acetate and washed with water and then brine. The organic phase with dried over anhydrous sodium sulfate, filtered, and concentrated. Purification by flash chromatography (Biotage 12M; 10:90 to 30:70 ethyl acetate - hexanes gradient) gave (±)- [l-(2,4-dichloro-pyrimidin-5-yl)-2-methyl-propyl]-(4-methoxy-phenyl)-amine. (Yield 17.6 mg; 17.3%).
Example lid
(±)-7-Chloro-4-isopropyl-3-(4-methoxy-phenyl)-l-phenyl-3,4-dihydro-lH- pyrimido [4,5-d]pyrimidin-2-one
Figure imgf000045_0001
408.89
(±)-[l-(2,4-Dichloro-pyrimidin-5-yl)-2-methyl-propyl]-(4-methoxy-phenyl)- amine (35.0 mg; 0.107 mmol) (from Example 19c supra) and phenyl isocyanate (12.8 μL; 0.12 mmol) (Aldrich) were combined in toluene (0.6 mL), sealed and heated in a microwave reactor (SmithCreator , 160 seconds to a maximum of 146 °C, then 800 seconds at 160 °C, and finally 600 seconds atl80 °C). The reaction was incomplete, and the mixture was concentrated and purified by flash chromatography (Biotage 12M; 20:80 ethyl acetate - hexanes) to give the intermediate (±)-l-[l-(2,4-dichloro-pyrimidin-5-yl)- 2-methyl-propyl]-l-(4-methoxy-phenyl)-3-phenyl-urea. (Yield 24.0 mg).
This intermediate urea was dissolved in freshly distilled tetrahydrofuran (0.4 mL) and the resulting solution was cooled in an ice - brine bath. Potassium tert-butoxide (1.0 M in tetrahydrofuran; 60 μL; 0.06 mmol) (Aldrich) was added. The mixture was stirred for 15 minutes in the cold and then the bath was removed and stirring continued for another 5 minutes. The mixture was filtered through a bed of silica gel and washed with ethyl acetate. The filtrate was concentrated and dried to give (±)-7-chloro-4-isopropyl-3-(4- methoxy-phenyl)-l-phenyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one. (Yield 21.5 mg; 49% overall for two steps).
Example lie
(+)-4-Isopropyl-3-(4-methoxy-phenyl)-l-phenyl-7-phenylamino-3,4-dihydro-lH- pyrimido [4,5-d] pyrimidin-2-one
Figure imgf000046_0001
465.55
(+)-7-Chloro-4-isopropyl-3-(4-methoxy-phenyl)-l-phenyl-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one (22.0 mg; 0.054 mmol) (from Example 19d supra) and aniline (50 μL; 0.55 mmol) (Aldrich) were combined and heated in an oil bath at 100 °C for 1 hour. Upon cooling, the residue was triturated with hexanes and the supernatant was decanted off. The residue was dissolved in ethyl acetate and washed with water and then brine. The organic phase was mixed with silica gel, concentrated and subsequently purification by flash chromatography (Biotage 12M; 40:60 ethyl acetate - hexanes) and crystallization from dichloromethane - ether - petroleum ether gave (±)-4-isopropyl-3- (4-methoxy-phenyl)-l-phenyl-7-phenylamino-3,4-dihydro-lH-pyrimido[4,5- d]pyrimidin-2-one as a white solid. (Yield 14.8 mg; 59.1%). Melting Point: 229 - 235 °C
HR-MS(ES+) m/z Calculated for C28H27N5O2 ([M+H]+): 466.2238; Found: 466.2243. m/z Calculated for C28H27N502 ([M+Na]+): 488.2057; Found: 488.2059.
Example 12a
(±)-(2-Chloro-5-methoxy-phenyl)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl] -amine
Figure imgf000046_0002
332.62 (±)-2,4-Dichloro-5-(l-bromoethyl)-pyrimidine (0.20 g; 0.79 mmol) (from Example lc supra), N,N-diisopropylethylamine (0.40 mL; 2.27 mmol) (Aldrich) and 2- chloro-5-methoxyaniline hydrochloride (0.15 g; 0.77 mmol) (Aldrich) were combined (neat) and heated in an oil bath at 90 °C for 16 hours. Upon cooling, the mixture was taken up in ethyl acetate and washed with water and then brine. The organic phase was dried over anhydrous sodium sulfate, filtered, and concentrated. Purification by flash chromatography (Biotage 40M; 5:95 to 15:85 ethyl acetate - hexanes gradient) gave (±)- (2-chloro-5-methoxy-phenyl)- [ l-(2,4-dichloro-pyrimidin-5-yl)-ethyl] -amine. (Yield 0.12 g; 45.9%).
Example 12b
(±)-7-Chloro-3-(2-chloro-5-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro- lH-pyrimido [4,5-d]pyrimidin-2-one
Figure imgf000047_0001
415.28
(±)-(2-C_ιloro-5-methoxy-phenyl)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl] -amine
(70 mg; 0.21 mmol) (from Example 20a supra) was combined with phenyl isocyanate (60 μL; 0.55 mmol) (Aldrich) and heated (neat) at 150 °C for 65 minutes. Thin layer chromatography analysis showed some unreacted starting material remained. Additional isocyanate (20 μL; 0.18 mmol) was added and the mixture heated at 150 °C for an additional 30 minutes. Upon cooling, hexanes was added. After stirring, the supernatant was decanted off and the residue dried to give the intermediate (±)-l-(2-chloro-5- methoxy-phenyl)-l- [l-(2-chloropyrimidin-5-yl)-ethyl] -3-phenyl-urea which contained about 20% starting material by HPLC.
This intermediate urea mixture was dissolved in tetrahydrofuran (0.5 mL) and cooled in an ice - brine bath. Potassium tert-butoxide (1.0 M in tetrahydrofuran; 200 μL; 0.20 mmol) was added dropwise. The mixture was stirred for 15 minutes in the cold and then the bath was removed and stirring continued for another 5 minutes. The mixture was filtered through a bed of silica gel (~1 g) and washed with ethyl acetate. The filtrate was combined with material from another reaction, concentrated and purified by flash chromatography (Biotage 12M; 20:80 to 40:60 ethyl acetate - hexanes) to give (±)-7- chloro-3-(2-chloro-5-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH- pyrimido [4,5-d] pyrimidin-2-one. (Yield 45.8 mg; 40% overall for two experiments).
Example 12c
(±)-3-(2-Chloro-5-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4- dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one
Figure imgf000048_0001
471.95
(±)-7-Chloro-3-(2-chloro-5-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one (0.20 g; 0.49 mmol) (from Example 20b supra) was combined with aniline (150 μL; 1.65 mmol) (Aldrich) and heated in an oil bath at 100 °C for about 70 minutes. Upon cooling, the residue was triturated with hexanes and then partitioned between ethyl acetate and water. The organic phase was washed with brine, dried over anhydrous sodium sulfate, filtered, and concentrated. The crude material was purified by flash chromatography (Biotage, 40M; 40:60 ethyl acetate - hexanes) to give (+)-3-(2-chloro-5-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4-dihydro- lH-pyrimido[4,5-d]pyrimidin-2-one as a light yellow solid. (Yield 0.15 g; 63.7%).
HR-MS(ES+) m/z Calculated for C26H22ClN5O2 ([M+H]+): 472.1535; Found: 472.1537.
Example 13a
(5)-(+)-3-(tert-Butyl-diphenyl-silanyloxy)-2-methylpropionic acid
Figure imgf000048_0002
342.51
Methyl (S)-(+)-3-hydroxy-2-methylpropionate (1.06 g; 8.99 mmol) (Aldrich) was dissolved in dichloromethane (10 L, dried over molecular sieves). Imidazole (0.85 g; 12.41 mmol) (Aldrich) and tert-butyl-diphenylsilyl chloride (2.30 mL; 8.85 mmol) (Aldrich) were added and the mixture was stirred at ambient temperature for 3 hours. The reaction was diluted with additional dichloromethane, washed with water and brine, dried over anhydrous sodium sulfate, filtered, and concentrated to yield methyl (S)-(+)- 3-(tert-butyl-diphenyl-silanyloxy)-2-methyl-propionate as an oil. (Yield 3.17 g; 98.8%).
This silyl-ether (3.15 g; 8.85 mmol) was dissolved in tetrahydrofuran - methanol (3:1) and saponified with aqueous sodium hydroxide (1.0 N; 10.0 mL; 10.0 mmol) overnight at ambient temperature. The reaction mixture was partitioned between ethyl acetate and water and acidified with 0.5 N hydrochloric acid to pH ~ 4. The organic phase was washed with water and brine, dried over anhydrous sodium sulfate, filtered, and concentrated. Purification by flash chromatography (Biotage 40M; 25:75 ethyl acetate - hexanes) gave (S)-(+)-3-(tert-butyl-diphenyl-silanyloxy)-2-methylpropionic acid as a white solid. (Yield 2.06 g; 68.1%).
Example 13b
(5)-tert-Butyl-2-isocyanato-propoxydiphenylsilane
Figure imgf000049_0001
311.42
This material was generated in situ.
(S)-(+)-3-(tert-Butyl-diphenyl-silanyloxy)-2-methylpropionic acid (0.44 g; 1.20 mmol) (from Example 21a supra) was dissolved in dichloromethane (3 mL, dried over molecular sieves). Triethylamine (0.36 mL; 2.58 mmol) (Aldrich) was added and the solution was cooled in an ice - water bath. Ethyl chloroformate (0.16 mL; 1.63 mmol) (Aldrich) was added dropwise and the mixture was stirred in the cold for 1 hour. The mixture was then diluted with additional dichloromethane, washed with water and brine, dried over anhydrous sodium sulfate, filtered, and concentrated to yield (S)-(+)-3-(tert- butyl-diphenyl-silanyloxy)-2-methylpropionic acid chloride.
To a solution of the above acid chloride in acetone (4 mL) was added a solution of sodium azide (0.25 g; 3.85 mmol) in water (4 mL). The mixture was stirred for 10 minutes and then diluted with dichloromethane and water. The organic phase was washed with brine, dried over magnesium sulfate, filtered, and concentrated to yield (5)- (+)-3-(tert-butyl-diphenyl-silanyloxy)-2-methylpropionyl azide.
This azide was dissolved in toluene (2 mL) and heated in an oil bath at 120 °C to generate the desired (S)-tert-butyl-2-isocyanato-propoxy-diphenylsilane by the Curtius rearrangement.
Example 13c
l-[2-(tert-Butyl-diphenyl-silanyloxy)-l-(S)-methyl-ethyl]-7-chloro-3-(4-methoxy- phenyl)-4-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000050_0001
601.23
(S)-tert-Butyl-2-isocyanato-propoxy-diphenylsilane (generated in situ from 0.440g, 1.20 mmol, of (S)-(+)-3-(tert-butyl-diphenyl-silanyloxy)-2-methylpropionic acid) (from Example 21b supra) in hot toluene (2 mL; 120 °C) was treated with a solution of (±)-[l- (2,4-dichloro-pyrimidin-5-yl)-ethyl]-(4-methoxy-phenyl)-amine (0.35 g; 1.10 mmol) (from Example Id supra) in toluene (2 mL). The resulting solution was kept at 120 °C for 30 minutes, then cooled to room temperature and concentrated. The residue was dissolved in anhydrous tetrahydrofuran (4 mL) and cooled in an ice - brine bath. Potassium tert-butoxide (1.0 M in tetrahydrofuran; 1.2 mL; 1.20 mmol) (Aldrich) was added dropwise and stirring continued in the cold for 15 minutes. The mixture was filtered through a bed of silica gel and eluted with ethyl acetate. Further purification with flash chromatography (Biotage 40 M; 25:75 ethyl acetate - hexanes) gave l-[2-(terf-butyl- diphenyl-silanyloxy)-l-(S)-methyl-ethyl]-7-chloro-3-(4-methoxy-phenyl)-4-methyl-3,4- dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one as a mixture of diastereomers. (Yield 0.31 g; 46%). No separation of diastereomers was seen at this time.
Example 13d
1 - (2-Hydroxy- 1 - (S) -methyl-ethyl) -3 - (4-methoxy-phenyl) -4-methyl-7- phenylamino-3,4-dihydro- lH-pyrimido [4,5-d] pyrimidin-2-one
Figure imgf000051_0001
l-[2-(tert-Butyl-diphenyl-silanyloxy)-l-(S)-methyl-ethyl]-7-chloro-3-(4-methoxy- phenyl)-4-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (0.286 g; 0.476 mmol) (from Example 21c supra) was combined with aniline (0.50 mL; 5.49 mmol) (Aldrich) and heated in an oil bath at 90 °C for 3 hours. The mixture was cooled to room temperature and partitioned between ethyl acetate and water. The organic phase was washed with brine, dried over anhydrous sodium sulfate, filtered, and concentrated. Flash chromatography (Biotage 40L; 40:60 ethyl acetate - hexanes) gave the silyl protected product. (Yield 0.29 g; 92%). There_was a partial separation of the diastereomers noted at this point.
The above diastereomeric mixture of silyl protected products (80 mg; 0.12 mmol) were dissolved in anhydrous tetrahydrofuran (0.5 mL) and treated with tetrabutylammonium fluoride (1.0 M in tetrahydrofuran; 0.45 mL; 0.45 mmol) (Aldrich) at room temperature for approximately 7 hours. The reaction mixture was concentrated and the residue was partitioned between ethyl acetate and water. The organic phase was washed with brine, dried over anhydrous sodium sulfate, filtered and concentrated. Purification by flash chromatography (Biotage 12M; 60:40 to 75:25 ethyl acetate - hexanes gradient) followed by crystallization from ethyl acetate - hexanes yielded l-(2- hydroxy-l-(S)-methyl-ethyl)-3-(4-methoxy-phenyl)-4-methyl-7-phenylamino-3,4- dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one as a mixture of diastereomers. (Yield 38.9 mg; 79.4%).
Melting Point: 165 - 180 °C. HR-MS(ES+) m/z Calculated for C23H25N5O3 ([M+H]+): 420.2030; Found: 420.2034.
Example 14a
(R)-(-)-3-(tert-Butyl-diphenyl-silanyloxy)-2-methylpropionic acid
Figure imgf000051_0002
342.51 Methyl (R)-(-)-3-hydroxy-2-methylproρionate (30.81 g; 260.8 mmol) (Aldrich) was dissolved in dichloromethane (300 mL, dried over molecular sieves). Imidazole (25.11 g; 365.1 mmol) (Aldrich) and tert-butyl-diphenylsilyl chloride (68.00 mL; 261.5 mmol) (Aldrich) were added and the mixture was stirred at room temperature for 6 hours. The reaction was diluted with additional dichloromethane (300 mL), washed with water (2 x 150 mL) and brine (1 x 150 mL), dried over anhydrous sodium sulfate, filtered, and concentrated to yield methyl (R)-(-)-3-(tert-butyl-diphenyl-silanyloxy)-2- methyl-propionate as an oil. (Yield 94.3 g).
This crude silyl-ether (94.3 g) was dissolved in tetrahydrofuran - methanol (3:1, 875 mL)) and saponified with aqueous sodium hydroxide (1.0 N; 300.0 mL; 300.0 mmol) for 46 hours at room temperature. The reaction mixture was concentrated under reduced pressure to remove part of the organic solvents, and then diluted with ethyl acetate. After cooling in an ice - water bath, the mixture was acidified with 1 N aqueous hydrochloric acid (300 mL). The layers were separated and the organic phase was washed with water and brine, dried over anhydrous sodium sulfate, filtered, and concentrated to gave crude (R)-(-)-3-(tert-butyl-diphenyl-silanyloxy)-2-methylpropionic acid containing small amounts of ethyl acetate. Purity was estimated by NMR to be 95%. (Yield 90.4 g; 96%).
Example 14b
(R)-tert-Butyl-2-isocyanato-propoxydiphenylsilane α Chiral .
Figure imgf000052_0001
311.42
This material was generated in situ.
(R)-3-(tert-Butyl-diphenyl-silanyloxy)-2-methylpropionic acid (0.508g; 1.48 mmol) (from Example 22a supra) was dissolved in dichloromethane (4 mL, dried over molecular sieves). Triethylamine (0.42 mL; 2.98 mmol) (Aldrich) was added and the solution was cooled in an ice - water bath. Ethyl chloroformate (0.17 mL; 1.78 mmol) (Aldrich) was added dropwise and the mixture was stirred in the cold for 50 minutes. The reaction mixture was diluted with additional dichloromethane and washed with water and then brine. The organic phase was dried over sodium sulfate and concentrated. To a solution of this anhydride intermediate in acetone (5 mL) was added a solution of sodium azide (0.29 g; 4.41 mmol) in water (5 mL). The mixture was stirred at room temperature for 10 minutes and then diluted with additional dichloromethane and water. The organic phase was washed with brine, dried over magnesium sulfate and concentrated to yield (R)-3-(tert-butyl-diphenyl-silanyloxy)-2-methylpropionyl azide.
This azide was dissolved in toluene (~5 mL; dried over 4A molecular sieves) and heated in an oil bath at 120 °C. Vigorous nitrogen gas evolution quickly resulted yielding the desired (R)-tert-butyl-2-isocyanato-propoxy-diphenylsilane by the Curtius rearrangement. This material was used without purification.
Example 14c
3 - [2-tert-Butyl-diphenyl-silanyloxy- 1 - (R) -methyl-ethyl] - 1 - (R) - [ 1 - (2,4- dichloropyrimidin- 5 -yl) - ethyl] - 1 - (4-methoxyphenyl) -urea
Figure imgf000053_0001
637.69
(R)-tert-Butyl-2-isocyanato-propoxy-diphenylsilane (generated in situ from 1.00 g,
2.861 mmol of (R)-3-(tert-butyl-diphenyl-silanyloxy)-2-methylpropionic acid) (from Example 22b supra) in hot toluene (4 mL) was treated with a toluene solution of (±)-[l- (2,4-dichloro-pyrimidin-5-yl)-ethyl]-(4-methoxy-phenyl)-amine (0.74 g; 2.38 mmol) (from Example Id supra). The solution was heated at 115 - 120 °C for 3 hours and then cooled to room temperature. The crude reaction solution was purified by flash chromatography (multiple runs with Biotage 40L columns; 35:65 ethyl acetate - hexanes), which successfully separated the two diastereomers. The first eluting diastereomer, 3- [2- tert-butyl-diphenyl-silanyloxy-l-(R)-methyl-ethyl]-l-(R)-[l-(2,4-dichloropyrimidin-5- yl)-ethyl]-l-(4-methoxyphenyl)-urea, was obtained with an e.e. of 90 - 95%. (Yield 0.47 g; 25.7%). Example 14d
3 - [2-tert-Butyl-diphenyl-silanyloxy- 1 - (R) -methyl-ethyl] - 1 - (S) - [ 1 - (2,4- dichloropyrimidin-5-yl)-ethyl]-l-(4-methoxyphenyl)-urea
Figure imgf000054_0001
637.69
The second eluting diastereomer (from Example 22c supra), 3-[2-tert-butyl- diphenyl-silanyloxy-l-(R)-methyl-ethyl]-l-(5)-[l-(2,4-dichloropyrimidin-5-yl)-ethyl]- l-(4-methoxyphenyl)-urea, was obtained with an e.e. of 85 - 90%. (Yield 0.44 g; 24.1%).
Example 14e
l-[2-(tert-Butyl-diphenyl-silanyloxy)-l-(R)-methyl-ethyl]-7-chloro-3-(4- methoxy-phenyl)-(R)-4-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000054_0002
3 - [2-tert-Butyl-diphenyl-silanyloxy- 1 - (R)-methyl-ethyl] - 1 - (R) - [ 1 - (2,4- dichloropyrimidin-5-yl)-ethyl]-l-(4-methoxyphenyl)-urea (0.46 g, 96% purity; 0.69 mmol) (from Example 22c supra) was dissolved in anhydrous tetrahydrofuran (2 mL) and cooled in an ice - brine bath. Potassium tert-butoxide (1.0 M in tetrahydrofuran; 0.85 mL; 0.85 mmol) (Aldrich) was added dropwise over 5 minutes. The mixture was stirred in the cold for 15 minutes and then the bath was removed and stirring continued for another 5 minutes. The reaction mixture was filtered through a bed of silica gel and eluted with ethyl acetate. This crude product was purified by flash chromatography (Biotage 40M; 25:75 ethyl acetate - hexanes) to give l-[2-(tert-butyl-diphenyl- silanyloxy) - 1 - (R) -methyl-ethyl] -7-chloro-3- (4-methoxy-phenyl) - (R)-4-methyl-3 ,4- dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one. (Yield 0.32 g; 77.6%).
Example 14f
l-(2-Hydroxy-l-(R)-methyl-ethyl)-3-(4-methoxy-phenyl)-4-(R)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000055_0001
419.49
A solution of 1- [2-(tert-butyl-diphenyl-silanyloxy)-l-(R)-methyl-ethyl] -7-chloro- 3-(4-methoxy-phenyl)-(R)-4-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (0.32 g; 0.51 mmol) (from Example 22e supra) and aniline (0.12 mL; 1.32 mmol)
(Aldrich) in toluene (0.25 mL, dried over molecular sieves) was heated in an oil bath at 110 °C for 1.75 hours. The reaction was diluted with ethyl acetate and washed with water and brine, dried over anhydrous sodium sulfate and concentrated. The crude material was purified by flash chromatography (Biotage 40L; 40:60 ethyl acetate - hexanes) to give 1- [2-(tert-butyl-diphenyl-silanyloxy)-l-(R)-methyl-ethyl] -3-(4-methoxy-phenyl)-4-(R)- methyl-7-phenylamino-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one. (Yield 0.30 g; 81.6%). This material showed an e.e. of > 95%.
This intermediate (0.29 g; 0.41 mmol) was dissolved in anhydrous tetrahydrofuran (1.5 mL) and treated with tetrabutylammonium fluoride (1.0 M in tetrahydrofuran; 1.3 mL; 1.30 mmol) (Aldrich) at 50 °C for 2 hours. The reaction was cooled to room temperature and concentrated. The residue was taken up in ethyl acetate and washed with water (2x) and brine, then dried over anhydrous sodium sulfate and concentrated. Purification by flash chromatography (Biotage 40M; 70:30 ethyl acetate - hexanes) followed by crystallization from ethyl acetate - hexanes gave l-(2-hydroxy-l-(R)-methyl- ethyl) -3-(4-methoxy-phenyl) -4- (R) -methyl-7-phenylamino-3,4-dihydro- 1H- pyrimido[4,5-d]pyrimidin-2-one as a white solid. (Yield 0.14 g; 79.1%). Melting Point: 158 - 162 °C. HR-MS(ES+) m/z Calculated for C23H25N5O3 ([M+H]+): 420.2030; Found: 420.2035
[α] = +53.3 (Rotation = +0.256; cone. = 4.8 mg/ mL (MeOH); λ = 589 nm).
Example 15a l-[2-(tert-Butyl-diphenyl-silanyloxy)-l-(R)-methyl-ethyl]-7-chloro-3-(4-methoxy- phenyl)-4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000056_0001
3-[2-tert-Butyl-diphenyl-silanyloxy-l-(R)-methyl-ethyl]-l-(S)-[l-(2,4- dichloropyrimidin-5-yl)-ethyl]-l-(4-methoxyphenyl)-urea (0.44 g, 96%; 66 mmol) (from Example 22d supra) was dissolved in anhydrous tetrahydrofuran (1.5 mL) and cooled in an ice - brine bath. Potassium tert-butoxide (1.0 M in tetrahydrofuran; 0.80 mL; 0.80 mmol) (Aldrich) was added dropwise over 5 minutes. The mixture was stirred in the cold for 15 minutes and then the bath was removed and stirring continued for another 5 minutes. The reaction mixture was filtered through a bed of silica gel and eluted with ethyl acetate. This crude product was purified by flash chromatography (Biotage 40M; 30:70 ethyl acetate - hexanes) to give l-[2-(tert-butyl-diphenyl- silanyloxy) - 1 - (R) -methyl- ethyl] -7-chloro-3- (4-methoxy-phenyl) -4- (5) -methyl-3,4- dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one. (Yield 0.29 g; 72.8%).
Example 15b
l-(2-Hydroxy-l-(R)-methyl-ethyl)-3-(4-methoxy-ρhenyl)-4-(S)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one
Figure imgf000056_0002
419.49
A solution of l-[2-(tert-butyl-diphenyl-silanyloxy)-l-(R)-methyl-ethyl]-7-chloro-
3-(4-methoxy-phenyl)-4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one (0.28 g; 0.45 mmol) (from Example 23a supra) and aniline (0.10 mL; 1.21 mmol) (Aldrich) in toluene (0.25 mL, dried over molecular sieves) was heated in an oil bath at 110 °C for 2 hours. The reaction was diluted with ethyl acetate and washed with water and brine, dried over anhydrous sodium sulfate and concentrated. The crude material was purified by flash chromatography (Biotage 40L; 40:60 ethyl acetate - hexanes) to give 1 - [2- ( tert-butyl-diphenyl-silanyloxy)- 1 - (R) -methyl-ethyl] -3 - (4-methoxy-phenyl) -4- (5) - methyl-7-phenylamino-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one. (Yield 0.23 g; 73.0%). This material showed an e.e. of -95%.
This intermediate (0.23 g; 0.32 mmol) was dissolved in anhydrous tetrahydrofuran (1.0 mL) and treated with tetrabutylammonium fluoride (1.0 M in tetrahydrofuran; 0.9 mL; 0.90 mmol) (Aldrich) at 50 °C for 2 hours. The reaction was cooled to room temperature and concentrated. The residue was taken up in ethyl acetate and washed with water (2x) and brine, then dried over anhydrous sodium sulfate and concentrated. Purification by flash chromatography (Biotage 40M; 7:11:2 ethyl acetate - dichloromethane - hexanes with 1% methanol) followed by crystallization from ethyl acetate - hexanes gave l-(2-hydroxy-l-(R)-methyl-ethyl)-3-(4-methoxy-phenyl)-4-(5)- methyl-7-phenylamino-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one as a white solid. (Yield 0.08 g; 59.3%).
Melting Point: 195-198 °C. HR-MS(ES+) m/z Calculated for C23H25N5O3 QM+H]+): 420.2030; Found: 420.2032. [α] = -62.8° (Rotation = -0.201; cone. = 3.2 mg/mL (MeOH); λ = 589 nm).
Example 16
l-[l-(2,4-Dichloro-pyrimidin-5-yl)-ethyl]-l-(4-methoxy-phenyl)-3-[l-(5)- phenyl-ethyl] -urea
Figure imgf000057_0001
445.352
A mixture of [l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-(4-methoxy-phenyl)-amine (378 mg, 1.27 mmol) (from Example Id supra) and (5)-(-)- -methylbenzyl isocyanate (205 mg, 1.39 mmol) (Aldrich) in toluene (5 mL) was stirred at 100 °C for 16 hours. After cooling to room temperature the reaction mixture was purified b passing through silica gel and eluting with hexanes - ethyl acetate (1:1) to give l-[l-(2,4-dichloro- pyrimidin-5-yl)-ethyl]-l-(4-methoxy-phenyl)-3-[l-(5)-phenyl-ethyl]-urea as two separable diastereomers. Less polar diastereomer (thin layer chromatography in hexanes - ethyl acetate, 1:1) (Yield 270 mg, 47.8%) and more polar diastereomer (Yield 284 mg, 50.3%).
Example 17
7-Chloro-3-(4-methoxy-phenyl)-4-methyl-l-[l-(S)-phenyl-ethyl)-3,4-dihydro- lH-pyrimido [4,5-d] pyrimidin-2-one
Figure imgf000058_0001
A solution of l-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-l-(4-methoxy-phenyl)-3- [l-(S)-phenyl-ethyl]-urea (less polar diastereomer, 250 mg, 0.56 mmol) (from Example 24 supra) in tetrahydrofuran (5 mL). cooled to 5 °C was treated with potassium tert- butoxide (1.0 M solution in tetrahydrofuran, 0.62 mL, 0.62 mmol). After stirring at 5 °C for 15 minutes and then at room temperature for another 15 minutes, reaction mixture was diluted with ethyl acetate (20 mL) and was washed with water (2 x 10 mL) and dried over MgSO . Solvent was evaporated under reduced pressure to give crude 7-chloro-3- (4-methoxy-phenyl)-4-methyl-l-[l-(S)-phenyl-ethyl)-3,4-dihydro-lH-pyrimido[4,5- d]pyrimidin-2-one which was used directly in the following step. (308 mg, contains some solvent).
Example 18
3-(4-Methoxy-phenyl)-4-methyl-7-phenylamino-l- [l-(S)-phenyl-ethyl] -3,4- dihydro- lH-pyrimido [4,5-d] pyrimidin-2-one
Figure imgf000058_0002
465.560
A suspension of crude 7-chloro-3-(4-methoxy-phenyl)-4-methyl-l-[l-(S)-phenyl-ethyl)- 3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one (308 mg, from 0.56 mmol) (from Example 25 supra) in aniline (0.195 mL) (Aldrich) was stirred at 100 °C for 3 hours. Reaction mixture was then cooled to room temperature, diluted with toluene (3 mL) and purified by column chromatography (silica gel) eluting with hexanes - ethyl acetate (1:1) to give 3-(4-methoxy-phenyl)-4-methyl-7-phenylamino-l-[l-(S)-phenyl-ethyl]-3,4- dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one. (Yield 140 mg,.53.7%).
Example 19
(+)-N-[6-(4-Methoxy-phenyl)-5-methyl-7-oxo-8-phenyl-5,6,7,8-tetrahydro- pyrimido[4,5-d]pyr_midin-2-yl]-N-phenyl-acetamide
Figure imgf000059_0001
479.54
To a suspension of (+)-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4- dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one (500 mg, 1.14 mmol) (from Example lg supra) in pyridine (1 mL) (Fisher) was added acetic anhydride (1.0 mL) followed by addition of 4-(dimethylamino)pyridine (25 mg) (Aldrich) in one portion. The reaction mixture was heated to 90 °C for 5 hours until no starting material was detectable by TLC analysis. The reaction mixture was quenched with water and extracted with ethyl acetate (3 x 50 mL). The combined organic extracts were successively washed with water ( 10 mL) and brine (10 mL), dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure to give the crude product which was purified by flash chromatography to give (+)-iST-[6-(4-methoxy-phenyl)-5-methyl-7-oxo-8-phenyl- 5,6,7,8-tetrahydiO-pyrimido[4,5-d]pyrimidin-2-yl]-IV-phenyl-acetamide. (Yield 373 mg, 68.0%).
Example 20a
tr πs-4-(tert-Butyl-dimethyl-silanyloxy)-cyclohexylamine
Figure imgf000059_0002
To a solution of tr ns-4-aminocyclohexanol (5.0 g, 43.4 mmol) (TCI US) in dichloromethane (100 mL) was added imidazole (14.78 g, 0.22 mol) (Aldrich) and tert- butyldimethylsilyl chloride (19.63 g, 0.13 mol) (Avocardo Research Chemicals). The reaction mixture was stirred at room temperature for 1 day. It was concentrated under reduced pressure, and the residue was diluted with ethyl acetate (100 mL) and water (100 mL). The organic layer was washed with IN sodium hydroxide solution, water and brine, dried (MgSO4), filtered and concentrated to give crude trα.zs-4-(tert-butyl- dimethyl-silanyloxy)-cyclohexylamine which was used in the next step without further purification. (Yield 7.62 g, 76.5%).
Example 20b
(±)-l-(trans-4-Hydroxy-cyclohexyl)-3-(4-methoxy-phenyl)-4-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000060_0001
459.5404
To a solution of trαπs-4-(tert-butyl-dimethyl-silanyloxy)-cyclohexylamine (500 mg, 2.20 mmol) (from Example 28a supra) and triethylamine (1.52 mL, 10.90 mmol) (Aldrich) in dichloromethane (15 mL) was added a 20% phosgene in toluene solution (3.2 mL, 6.50 mmol) (Fluka) at 0 °C. The resulting mixture was stirred for 15 minutes, then filtered and the filtrate was concentrated to a residue that was distilled at 110 °C under high vacuum using a Kugelrohr apparatus to give trαns-4-(tert-butyl-dimethyl-silanyloxy)- cyclohexyl isocyanate (485 mg) as a colorless liquid.
This intermediate isocyanate (223 mg, 0.87 mmol) was dissolved in anhydrous tetrahydrofuran (approx. 3 mL) and added via a cannula to a solution of (±)-[l-(2,4- dichloro-pyrimidin-5-yl)-ethyl]-(4-methoxyphenyl)-amine (204 mg, 0.67 mmol) (from Example Id supra) and n-butyllithium (2.5 M solution in hexanes, 295 μL, 0.74 mmol) (Aldrich) in anhydrous tetrahydrofuran (15 mL) at -78 °C. The resulting reaction mixture was allowed to stir and warm up to room temperature within 2.25 hours and then partitioned between ethyl acetate and water. The ethyl acetate layer was removed, dried over sodium sulfate, filtered and concentrated to a residue that was purified by chromatography with a silica gel column and a 0 - 40 % ethyl acetate in hexanes gradient to give a brownish foam. This intermediate was then dissolved in aniline (3 mL) (Aldrich) and the resulting solution was heated at 90 °C for 8 hours. After cooling, the reaction mixture was directly applied on a silica gel column and purified by chromatography with a 0 - 50% ethyl acetate in hexanes gradient. This purified intermediate was then dissolved in a 20% solution of trifluoro acetic acid in dichloromethane (5 mL) and water (300 μL) at 0 °C. After stirring for 30 minutes at 0 °C the mixture was partitioned between ethyl acetate and 0.5N aqueous sodium hydroxide solution. The pH of the aqueous layer was adjusted to 13 by adding solid sodium hydroxide. The organic phase was then separated, dried over sodium sulfate, filtered and concentrated and the resulting residue was purified on a silica gel column with a 0 - 100% ethyl acetate in hexanes to product. This purified product was dissolved in dichloromethane and precipitated with excess pentane to give (±)-l-(trans-4-hydroxy- cyclohexyl)-3-(4-methoxy-phenyl)-4-methyl-7-phenylamino-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one as a white solid. (Yield 121 mg, 9 %). HRMS m/z calcd for C26H29N5O3 ([M+H]+): 460.2343. Found: 460.2347.
Example 21
The following compounds can be prepared by methods analogous to those herein disclosed above:
Example 21a
l-[(lR,3R)-3-Hydroxy-cycloρentyl]-3-(4-methoxy-ρhenyl)-4-(S)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one
Figure imgf000061_0001
Example 21b
l-[(15,3S)-3-Hydroxy-cyclopentyl]-3-(4-methoxy-phenyl)-4-(S)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000061_0002
Example 21c
7-(4-Fluoro-phenylamino)-l-[(lR,3R)-3-hydroxy-cyclopentyl)]-3-(4-methoxy- phenyl)-4-(5)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000062_0001
Example 21 d
7-(4-Fluoro-phenylamino)-l-[(15,3S)-3-hydroxy-cyclopentyl)]-3-(4-methoxy- phenyl)-4-(5)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000062_0002
Example 2 If
7- (4-Fluoro-phenylamino ) - 1 - (2-hydroxy- 1- (R)-methyl-ethyl) -3- (4-methoxy- phenyl)-4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000062_0003
Example 21g
3-(4-Chloro-phenyl)-7-(4-fluoro-phenylamino)-l-(2-hydroxy-l-(R)-methyl- ethyl)-4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000063_0001
Example 21h
3-(4-Chloro-2-fluoro-phenyl)-7-(4-fluoro-phenylamino)-l-(2-hydroxy-l-(R)- methyl-ethyl)-4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000063_0002
Example 21i
3-(4-Chloro-ρhenyl)-l-(2-hydroxy-l-(R)-methyl-ethyl)-4-(S)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000063_0003
Example 21j
3-(4-Chloro-2-fluoro-phenyl)-l-(2-hydroxy-l-(R)-methyl-ethyl)-4-(S)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one
Figure imgf000063_0004
Example 21k
3-(4-Chloro-phenyl)-l-(3-hydroxy-2-(5)-methyl-proρyl)-4-(5)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one
Figure imgf000064_0001
Antiproliferative Activity
The antiproliferative activity of the compounds of the invention is demonstrated below in Examples 22 and 23. These activities indicate that the compounds of the present invention are useful in treating cancer, in particular solid tumors such as breast, lung, prostate and colon tumors, more particularly breast and colon tumors.
Example 22
Kinase Assays
To determine inhibition of KDR, FGFR, EGFR, and PDGFR activity, kinase assays were conducted using an HTRF (Homogeneous Time Resolved Fluorescence) assay. This assay is described in A. J. Kolb et. al., Drug Discovery Today, 1998, 3(7), p 333.
Prior to kinase reaction, recombinant EEE- tagged KDR was activated in the presence of activation buffer (50 mM HEPES, pH 7.4, 1 mM DTT, 10% glycerol, 150 mM NaCl, 0.1 mM EDTA, 26 mM MgCl2, and 4 mM ATP). The enzyme was incubated at 4 °C for 1 hour.
Kinase activity assays were performed in 96-well polypropylene plates (Falcon) with a total volume of 90 μL in each well. Each well contained 1 μM KDR substrate (Biotin-EEEEYFELVAKKKK), 1 nM activated KDR, and a test compound with one of 8 assay concentrations ranging from 100 μM to 128 pM (1:5 serial dilution). The kinase activity assay was done in the presence of 100 mM HEPES, pH 7.4, 1 mM DTT, 0.1 mM Na2VO4, 25 mM MgCl2, 50 mM NaCl (from KDR stock solution), 1% DMSO (from compound), 0.3 mM ATP (at Km concentration) and 0.02% BSA. The reaction was incubated at 37 °C for 30 minutes. To stop the KDR reaction, 72 μL of reaction mixture was transferred into a STOP plate containing 18 μL of revelation buffer (20 mM EDTA, 50 mM HEPES, pH 7.4, 0.02% BSA, 10 nM Eu-labelled anti-pY antibody (final cone. 2 nM), and 100 nM streptavidin (final cone. 20 nM)). After mixing, 35 μL of solution was transferred into duplicate wells of a 384-well black plate (Costar), and read at 615/665 nm on a Wallac Victor 5 reader.
FGFR, EGFR, and PDGFR activity assays were carried out as described above for the KDR activity assay with the following differences. GST-tagged FGFR enzyme was activated at room temperature for 1 hour in the following activation buffer: 100 mM HEPES, pH 7.4, 50 mM NaCl, 20 mM MgCl2, and 4 mM ATP. The kinase activity assay was performed with 1 μM substrate (Biotin-EEEEYFELV), 1.5 nM activated FGFR, and test compound in the presence of 100 mM HEPES, 1 mM DTT, 0.4 mM MgCl2, 0.4 mM MnCl2, 50 mM NaCl, 1% DMSO, 10 μM ATP (Km= 8.5 μM for FGFR), 0.1 mM Na2VO4, and 0.02% BSA, in a total volume of 90 μL. The rest of the assay was performed in the same manner as KDR assay.
The EGFR kinase activity assay was performed with 1 μM substrate (Biotin- EEEEYFELV), 1.5 nM EGFR, test compounds, 100 mM HEPES, pH 7.4, 1 mM DTT, 5 mM MgCl2, 2 mM MnCl2, 1% DMSO, 0.5 μM ATP (Krafor EGFR), 0.1 mM Na2VO4, and 0.02% BSA. The rest of the assay was performed in the same manner as the KDR assay.
The PDGFR kinase activity assay was performed with 1 μM substrate (Biotin- EEEEYFELV), 1.0 nM PDGFR, test compounds, 100 mM HEPES, pH 7.4, 1 mM DTT, 5 mM MgCl2, 2 mM MnCl2, 1% DMSO, 2.3 μM ATP (Km for PDGFR), 0.1 mM Na2VO4, and 0.02% BSA. The rest of the assay was performed in the same manner as the KDR assay.
Compound IC50 values were determined from duplicate sets of data, and calculated by using Excel and fitting data to equation Y=[(a-b)/{l+(X/c)d]+b, where a and b are enzyme activity in the presence of no test inhibitor compound_and an infinite amount of inhibitor test compound, respectively, c is the IC50 and d is the hill constant of the compound response. The IC50 value is the concentration of test compound that reduces by 50% the enzyme activity under the test conditions described.
The results of the foregoing in vitro experiments, including IC50 values, are set forth in Table 1 below.
Table 1
IC50 (μM) - Enzyme Inhibition Assays
Figure imgf000065_0001
Figure imgf000066_0001
Example 31
VEGF and FGF-Stimulated HUVEC Proliferation Assays
The antiproliferative activity of test compounds of this invention in cell-based assays was evaluated by BrdU assay using the BrdU kit (Roche Biochemicals 1-647-229). Human umbilical vein endothelial cells (HUVEC, Clonetics CC-2519) were cultured in EGM-2 (Clonetics CC-3162) medium and seeded at 10000 cells per well in a volume of 200 μL of EGM-2 (Clonetics CC-3162) media in a 96-well flat bottom plates (Costar 3595) overnight. After 24 hours of growth at 37 °C with 5% CO2, the incubation media was removed slowly by aspiration and the content of each well was washed with 300 μL pre-warmed EBM-2 (Clonetics CC-3156) containing 50 μg per mL of gentamycin and 50 ng per mL of amphotercin-B (Clonetics CC-4083). Subsequently, the remaining media was again aspirated and replaced with 160 μL per well of serum starvation media (EBM-2 supplemented with 1% heat inactivated FBS (Clonetics CC-4102), 50 μg per mL gentamycin and 50 ng per mL of amphotercin-B (Clonetics CC-4083), 10 units per mL of Wyeth-Ayerst heparin (NDC0641-0391-25), and 2 mM L-glutamine (GIBCO 25030- 081). After serum starving the cells for 24 hours, 20 μL of test compound at 10X test concentration in serum starvation medium with 2.5% DMSO was added to the appropriate wells. The control wells contained 20 μL of serum starvation medium with 2.5% DMSO. Plates were returned to the incubator for 2 hours. After pre-incubating the cells with the test compounds for 2 hours, 20 μL of growth factors at 10X assay concentration diluted in serum starvation media , FGF at 50 ng per mL, or VEGF (R8 D systems 293-VE) at 200 ng per mL were added. The final concentration of FGF in the assay was 5 ng per mL and the final concentration of VEGF in the assays was 20 ng per mL. The growth factor free control wells had 20 μL per well of serum starvation media with the same amount of BSA as the wells with growth factors. The plates were returned to the incubator for an additional 22 hours.
BrdU ELISA
After 24 hour exposure to the test compounds, the cells were labeled with BrdU (Roche Biochemicals 1-647-229), by adding 20 μL per well of BrdU labeling reagent that has been diluted (1:100) in serum starvation medium. The plates were hen returned to the incubator for 4 hours. The labeling medium was removed by draining the medium onto paper towels. The cells were fixed and DNA denatured by adding 200 μL of fixation / denaturation solution to each well and incubating at room temperature for 45 minutes. The fixation / denaturation solution was drained onto paper towels and to each well was added 100 μL of anti-BrdU-POD and the wells were incubated for 2 hours at room temperature. The antibody solution was removed and the wells were each washed 3 - 4 times with 300 μL PBS. 100 μL of the TMB substrate solution was added to each well_and the wells were incubated at room temperature for 5 - 8 minutes. The reaction was then stopped by adding 100 μL per well of 1 M phosphoric acid. The plates were read at 450 nm with reference wavelength of 650 nm. The percent inhibition for each test compound was calculated by subtracting the absorbency of the blank (no cells) wells from all wells, then subtracting the division of the average absorbency of each test duplicate by the average of the controls from 1. The final product was then multiplied by 100 (% of inhibition = (1-average absorbency of test duplicate/average of control) 100). The IC50 value is the concentration of test compound that inhibits by 50% BrdU labeling, and is a measure of inhibition of cell proliferation. The IC50 is determined from the linear regression of a plot of the logarithm of the concentration versus percent inhibition. The IC50 values are shown in Table 2 below.
Table 2
IC5o (μM) of VEGF and FGF-Stimulated HUVEC Proliferation Assays
Figure imgf000068_0001
Example 24
Tablet Formulation
Figure imgf000069_0001
^Compound A represents a compound of the invention.
Manufacturing Procedure:
1. Mix Items 1, 2 and 3 in a suitable mixer for 15 minutes.
2. Granulate the powder mix from Step 1 with 20% Povidone K30 Solution (Item
4).
3. Dry the granulation from Step 2 at 50 °C.
4. Pass the granulation from Step 3 through a suitable milling equipment.
5. Add the Item 5 to the milled granulation Step 4 and mix for 3 minutes.
6. Compress the granulation from Step 5 on a suitable press. Example 25
Capsule Formulation
Figure imgf000070_0001
^Compound A represents a compound of the invention.
Manufacturing Procedure:
1. Mix Items 1, 2 and 3 in a suitable mixer for 15 minutes.
2. Add Items 4 8c 5 and mix for 3 minutes.
3. Fill into a suitable capsule.
Example 26
Injection Solution/Emulsion Preparation
Figure imgf000071_0001
"Compound A represents a compound of the invention.
Manufacturing Procedure:
1. Dissolve item 1 in item 2.
2. Add items 3, 4 and 5 to item 6 and mix until dispersed, then homogenize.
3. Add the solution from step 1 to the mixture from step 2 and homogenize until the dispersion is translucent.
4. Sterile filter through a 0.2 μm filter and fill into vials.
Example 27
Injection Solution/Emulsion Preparation
Figure imgf000072_0001
"Compound A represents a compound of the invention.
Manufacturing Procedure:
1. Dissolve item 1 in item 2.
2. Add items 3, 4 and 5 to item 6 and mix until dispersed, then homogenize.
3. Add the solution from step 1 to the mixture from step 2 and homogenize until the dispersion is translucent.
4. Sterile filter through a 0.2 μm filter and fill into vials.
While the invention has been illustrated by reference to specific and preferred embodiments, those skilled in the art will understand that variations and modifications ma be made through routine experimentation and practice of the invention. Thus, the invention is intended not to be limited by the foregoing description, but to be defined by the appended claims and their equivalents.

Claims

Claims
1. A compound of formula
Figure imgf000073_0001
or a pharmaceutically acceptable salt thereof, wherein
R1 is selected from the group
H,
Ci-io alkyl,
Cno alkyl substituted by up to three groups selected from aryl, cycloalkyl, heteroaryl, heterocycle, NR10RU, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2, wherein the aryl, cycloalkyl, heteroaryl, and heterocycle groups may each independently be substituted by up to three groups selected from NR10Rπ, OR12, SR12, , halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2)
aryl,
aryl substituted by up to three groups selected from lower alkyl, NR10Rπ, OR12,
SR1', , halogen, COR , 1"3, CO2R", CONR1;JR14, SO2NR"R14, SOR1', SO2R , 1"3, CN and
NO2,
heteroaryl, heteroaryl substituted by up to three groups selected from lower alkyl, NR10Rπ, , OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2,
heterocycle,
heterocycle substituted by up to three groups selected from lower alkyl, NR10RU,
OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2,
C3-10 cycloalkyl,
C3-10 cycloalkyl substituted by up to three groups selected from lower alkyl NR10Rπ, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13,
SO2R13, CN and NO2,
C2-io alkenyl,
C2-ιo alkenyl substituted by up to three groups selected from NR10Rπ, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2) and
C2-ιo alkynyl, substituted by up to three groups selected from NR10RU, OR12, SR12, halogen, COR13, CO2R13, CONR13R14, SO2NR13R14, SOR13, SO2R13, CN and NO2;
R , R and R are independently selected from the group consisting of
H,
halogen,
COR13,
CO2R13,
CONR13R14,
SO2NR13R14,
SOR 13
SO2R13,
CN, and NO2;
R5, R6, R7and R8 are independently selected from the group
H,
lower alkyl,
lower alkyl substituted by hydroxy or alkoxy,
NR15R16,
OH,
OR17,
SR17,
halogen,
COR17,
CO2R 17
CONR17R18,
SO2NR17R18,
SOR 17
SO2R17, and
CN;
R9 is selected from the group
H,
Figure imgf000075_0001
COR17;
R ) 10 _ a_ndJ T R) 11 are independently selected from the group H,
COR13,
CO2R13,
CONR13R14,
SO2R 13
SO2NR13R14,
lower alkyl,
lower alkyl substituted by hydroxy, alkoxy or NR15R16,
cycloalkyl,
cycloalkyl substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
heterocycle, and
heterocycle substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
or, alternatively, NR10Rπ can form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms and being optionally substituted by the group consisting of one or more lower allcyl, OR12, COR13, CO2R13, CONR13R14,
SOR13, SO2R13, and SO2NR13R14;
selected from the group
H,
lower alkyl,
COR13,
CONR1 R14,
C -6 alkyl substituted by hydroxy, alkoxy, or NR15R16, cycloalkyl,
cycloakyl substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
heterocycle, and
heterocycle substituted by hydroxy, alkoxy, lower alkyl, or NR15R16; R13 and R14 are independently selected from the group
H,
lower alkyl,
C2.6 alkyl substituted by hydroxy, alkoxy, or NR15R16,
cycloalkyl,
cycloaldyl substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
heterocycle, and
heterocycle substituted by hydroxy, alkoxy, lower alkyl, or NR15R16,
or , alternatively, NR13R can form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms and being optionally substituted by the group consisting of one or more lower alkyl, OR17, COR17, CO2R17, CONR17R18, SO2R17, and SO2NR17R18;
R 5 is selected from the group
H,
lower alkyl,
COR17, and
CO2R17; and
R16, R17 and R18 are independently selected from the group
H, and
lower alkyl,
or, alternatively, NR15R and NR R can each independentiy form a ring having 3 to 7 atoms, said ring optionally including one or more additional hetero atoms;
R19 and R20 are independently selected from the group
H, and
lower alkyl; and R is selected from
lower alkyl, and
C2-6 alkyl substituted by hydroxy, alkoxy or NR15R16.
2. The compound of formula I of claim 1, wherein R1 is selected from aryl and aryl substituted by OR12 or CONR13R14.
3. The compound of formula I of claim 1 or 2, wherein R1 is selected from phenyl and phenyl substituted by OR12 or CONR13R14.
4. The compound of formula I of claim 1, wherein R1 is selected from lower alkyl and C2-6 alkyl substituted by OR12 or CONR13R14.
5. The compound of formula I of any one of claims 1 to 4, wherein R2 is H.
6. The compound of formula I of any one of claims 1 to 5, wherein R3 is H.
7. The compound of formula I of any one of claims 1 to 7, wherein R2,R3 and R4 are H.
8. The compound of formula I of any one of claims 1 to 5, wherein R3 is halogen.
9. The compound of formula I of any one of claims 1 to 8, wherein R9 is H.
10. The compound of formula I of claim 1 having the formula
R8
Figure imgf000078_0001
11. A compound of formula I of claim 1 selected from the group:
(+)-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one; 3-(4-methoxy-phenyl)-4-(R)-methyl-l-phenyl-7-phenylamino-3,4-dihydro-lH- pyrimido [4,5-d]pyrimidin-2-one;
3-(4-methoxy-phenyl)-4-(S)-methyl-l-phenyl-7-phenylamino-3,4-dihydro-lH- pyrimido [4,5-d] pyrimidin-2-one;
(+)-l,3-bis-(4-methoxy-phenyl)-4-methyl-7-phenylamino-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one;
(+)-3-[3-(4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro-2H- pyrimido[4,5-d]pyrimidin-l-yl] -benzonitrile; and
(+)-3-[3-(4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro-2H- pyrimido[4,5-d]pyrimidin-l-yl]-benzamide.
12. A compound of formula I of claim 1 selected from the group:
(±)-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4-dihydro- lH-pyrimido[4,5-d]pyrimidin-2-one;
(±)-3-[3-(2-fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro- 2H-pyrimido [4,5-d] pyrimidin- 1-yl] -benzonitrile;
(+)-3-[3-(2-fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-7-phenylamino-3,4-dihydro- 2H-pyrimido [4,5-d] pyrimidin- 1-yl] -benzamide;
(+)-3-(2-chloro-5-methoxy-phenyl)-4-methyl-l-phenyl-7-phenylamino-3,4-dihydro- lH-pyrimido [4,5-d] pyrimidin-2~one; and
l-(2-hydroxy-l-(S)-methyl-ethyl)-3-(4-methoxy-phenyl)-4-methyl-7-phenylamino-3,4- dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one.
13. A compound of formula I of claim 1 selected from the group:
l-(2-hydroxy-l-(R)-methyl-ethyl)-3-(4-methoxy-phenyl)-4-(R)-methyl-7-phenylamino- 3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
1 - (2-hydroxy- 1 - (R) -methyl- ethyl) -3 - (4-methoxy-phenyl) -4- (S) -methyl-7-phenylamino- 3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
3 - (4-methoxy-phenyl) -4-methyl- 7-phenylamino - 1 -[ 1 -( S) -phenyl- ethyl] - 3 ,4- dihydro- lH-pyrimido[4,5-d]pyrimidin-2-one; (+)-_V"-[6-(4-methoxy-phenyl)-5-methyl-7-oxo-8-phenyl-5,6,7,8-tetrahydro- pyrimido [4,5-d]pyrimidin-2-yl] -N-phenyl-acetamide; and
(±)-l-(traπs-4-hydroxy-cyclohexyl)-3-(4-methoxy-ρhenyl)-4-methyl-7-phenylamino- 3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one.
14. A compound of formula I of claim 1 selected from the group:
1 -[( 1R,3R) -3-hydroxy-cyclopentyl] -3 - (4-methoxy-phenyl) -4- (S) -methyl-7- phenylamino-3,4-dihydro- lH-pyrimido [4,5-d] pyrimidin-2-one;
l-[(lS,35)-3-hydroxy-cyclopentyl]-3-(4-methoxy-phenyl)-4-(S)-methyl-7-phenylamino- 3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one;
7-(4-fluoro-phenylamino)-l-[(lR,3R)-3-hydroxy-cyclopentyl)]-3-(4-methoxy-phenyl)- 4-(S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
7-(4-fluoro-phenylamino)-l-[(15,35)-3-hydroxy-cyclopentyl)]-3-(4-methoxy-phenyl)- 4-(5)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
7- (4-fluoro-phenylamino) - 1 - (2-hydroxy- 1 - (R) -methyl-ethyl) -3- (4-methoxy-phenyl)-4- (S)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
3-(4-chloro-phenyl)-7-(4-fluoro-phenylamino)-l-(2-hydroxy-l-(R)-methyl-ethyl)-4- (5)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
3-(4-chloro-2-fluoro-phenyl)-7-(4-fluoro-phenylamino)-l-(2-hydroxy-l-(R)-methyl- ethyl)-4-(5)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
3-(4-chloro-phenyl)-l-(2-hydroxy-l-(R)-methyl-ethyl)-4-(5)-methyl-7-phenylamino- 3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
3-(4-chloro-2-fluoro-phenyl)-l-(2-hydroxy-l-(R)-methyl-ethyl)-4-(S)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido [4,5-d] pyrimidin-2-one;
3-(4-chloro-phenyl)-l-(3-hydroxy-2-(5)-methyl-propyl)-4-(5)-methyl-7-phenylamino- 3,4-dihydro- lH-pyrimido[4,5-d]pyrimidin-2-one; and
3-(4-chloro-2-fluoro-phenyl)-l-(3-hydroxy-2-(S)-methyl-propyl)-4-(S)-methyl-7- phenylamino-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one.
15. A pharmaceutical composition comprising a therapeutically effective amount of a compound of any one of claims 1 to 14 and a pharmaceutically acceptable carrier or excipient.
16. The pharmaceutical composition of claim 15, wherein the compound is suitable for administration to a patient having cancer.
17. Compounds of any one of claims 1 to 14 for use as medicaments.
18. Use of compounds of any one of claims 1 to 14 for the preparation of medicaments for the treatment and control of cancer.
19. The use of claim 18 for the treatment and control of breast, lung, colon or prostate cancer.
20. The use of claim 18 wherein the cancer is breast or colon cancer.
21. A process for the preparation of a compound of formula I of claim 1, which process comprises
a) reacting a compound of the formula
Figure imgf000081_0001
wherein R1, R5, R6, R7 and R8 are as defined in claim 1, with an aniline derivative of the formula
Figure imgf000081_0002
wherein R , R and R are as defined in claim 1, to obtain a compound of the formula
Figure imgf000082_0001
wherein R9 is H, and if desired,
b) reacting the compound of formula lb with an acid halide or anhydride to obtain
a compound of formula I, wherein R9 is
Figure imgf000082_0002
or COR17, and wherein R , R , R and R are as defined in claim 1,
and/ or c) if desired, converting the compound of formula I into a pharmaceutically acceptable salt.
22. A compound of formula I of any one of claims 1 to 14 prepared by a process according to claim 21.
23. A compound selected from the group:
(+)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-(4-methoxy-phenyl)-amine;
(±)-7-chloro-3-(4-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH-pyrimido[4,5- d] pyrimidin-2-one;
(±)-{2-chloro-5-[l-(4-methoxy-phenylamino)-ethyl]-pyrimidin-4-yl}-(4-methoxy- phenyl) -amine;
(+)-7-chloro-l,3-bis-(4-methoxy-phenyl)-4-methyl-3,4-dihydro-lH-pyrimido[4,5- d]pyrimidin-2-one;
(±)-3-[7-chloro-3-(4-methoxy-phenyl)-4-methyl-2-oxo-3,4-dihydro-2H-pyrimido[4,5- d] pyrimidin- 1 -yl] -b enzonitrile;
(±)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-(2-fluoro-4-methoxy-phenyl)-amine; (+)-7-chloro-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one;
(+)-3-[7-chloro-3-(2-fluoro-4-methoxy-phenyl)-4-methyl-2-oxo-3,4-dihydro-2H- pyrimido[4,5-d]pyrimidin-l-yl] -benzonitrile; and
(±)-(2-chloro-5-methoxy-phenyl)-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-amine.
24. A compound selected from the group:
(+)-7-chloro-3-(2-chloro-5-methoxy-phenyl)-4-methyl-l-phenyl-3,4-dihydro-lH- pyrimido [4,5-d]pyrimidin-2-one;
l-[2-(tert-butyl-diphenyl-silanyloxy)-l-(S)-methyl-ethyl]-7-chloro-3-(4-methoxy- phenyl)-4-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
3- [2-tert-butyl-diphenyl-silanyloxy- 1 - (R) -methyl-ethyl] - 1- (R) - [ 1 - (2,4- dichloropyrimidin- 5 -yl) -ethyl] - 1 - (4-methoxyphenyl) -urea;
3-[2-tert-butyl-diphenyl-silanyloxy-l-(R)-methyl-ethyl]-l-(S)-[l-(2,4- dichlor opyrimidin- 5 -yl) -ethyl] - 1 - (4-methoxyphenyl) -urea;
l-[2-(tert-butyl-diphenyl-silanyloxy)-l-(R)-methyl-ethyl]-7-chloro-3-(4-methoxy- phenyl)-(R)-4-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
l-[2-(tert-butyl-diphenyl-silanyloxy)-l-(R)-methyl-ethyl]-7-chloro-3-(4-methoxy- phenyl)-4-(5)-methyl-3,4-dihydro-lH-pyrimido[4,5-d]pyrimidin-2-one;
l-[l-(2,4-dichloro-pyrimidin-5-yl)-ethyl]-l-(4-methoxy-phenyl)-3-[l-(S)-phenyl- ethyl] -urea; and
7-chloro-3-(4-methoxy-phenyl)-4-methyl-l-[l-(S)-phenyl-ethyl)-3,4-dihydro-lH- pyrimido[4,5-d]pyrimidin-2-one.
25. The novel compounds, pharmaceutical compositions, processes, and uses as described herein before.
***
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