WO1999067254A2 - Multi-drug resistant retroviral protease inhibitors and use thereof - Google Patents

Multi-drug resistant retroviral protease inhibitors and use thereof Download PDF

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Publication number
WO1999067254A2
WO1999067254A2 PCT/US1999/014120 US9914120W WO9967254A2 WO 1999067254 A2 WO1999067254 A2 WO 1999067254A2 US 9914120 W US9914120 W US 9914120W WO 9967254 A2 WO9967254 A2 WO 9967254A2
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multidrug
resistant
compound
alkyl
protease
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PCT/US1999/014120
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French (fr)
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WO1999067254A3 (en
Inventor
John W. Erickson
Sergei V. Gulnik
Arun K. Ghosh
Khaja A. Hussain
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The United States Of America Represented By The Secretary, Department Of Health And Human Services
The Board Of Trustees Of The University Of Illinois
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Priority to AU48281/99A priority Critical patent/AU4828199A/en
Priority to PCT/US1999/014120 priority patent/WO1999067254A2/en
Publication of WO1999067254A2 publication Critical patent/WO1999067254A2/en
Publication of WO1999067254A3 publication Critical patent/WO1999067254A3/en

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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/33Heterocyclic compounds
    • A61K31/395Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/435Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
    • A61K31/44Non condensed pyridines; Hydrogenated derivatives thereof
    • A61K31/445Non condensed piperidines, e.g. piperocaine
    • A61K31/4523Non condensed piperidines, e.g. piperocaine containing further heterocyclic ring systems
    • A61K31/4525Non condensed piperidines, e.g. piperocaine containing further heterocyclic ring systems containing a five-membered ring with oxygen as a ring hetero atom
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/33Heterocyclic compounds
    • A61K31/335Heterocyclic compounds having oxygen as the only ring hetero atom, e.g. fungichromin
    • A61K31/34Heterocyclic compounds having oxygen as the only ring hetero atom, e.g. fungichromin having five-membered rings with one oxygen as the only ring hetero atom, e.g. isosorbide
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • A61P31/14Antivirals for RNA viruses
    • A61P31/18Antivirals for RNA viruses for HIV
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P37/00Drugs for immunological or allergic disorders
    • A61P37/02Immunomodulators
    • A61P37/04Immunostimulants
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D493/00Heterocyclic compounds containing oxygen atoms as the only ring hetero atoms in the condensed system
    • C07D493/02Heterocyclic compounds containing oxygen atoms as the only ring hetero atoms in the condensed system in which the condensed system contains two hetero rings
    • C07D493/04Ortho-condensed systems
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/02Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving viable microorganisms
    • C12Q1/025Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving viable microorganisms for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/34Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving hydrolase
    • C12Q1/37Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving hydrolase involving peptidase or proteinase
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2333/00Assays involving biological materials from specific organisms or of a specific nature
    • G01N2333/005Assays involving biological materials from specific organisms or of a specific nature from viruses
    • G01N2333/08RNA viruses
    • G01N2333/15Retroviridae, e.g. bovine leukaemia virus, feline leukaemia virus, feline leukaemia virus, human T-cell leukaemia-lymphoma virus
    • G01N2333/155Lentiviridae, e.g. visna-maedi virus, equine infectious virus, FIV, SIV
    • G01N2333/16HIV-1, HIV-2
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2333/00Assays involving biological materials from specific organisms or of a specific nature
    • G01N2333/81Protease inhibitors
    • G01N2333/8107Endopeptidase (E.C. 3.4.21-99) inhibitors
    • G01N2333/8142Aspartate protease (E.C. 3.4.23) inhibitors, e.g. HIV protease inhibitors

Definitions

  • the present invention relates to multidrug-resistant retroviral protease inhibitors, compositions, uses thereof, and related methods.
  • AIDS Acquired immune deficiency syndrome
  • the AIDS virus was first identified in 1983. It has been known by several names and acronyms. It is the third known T-lymphocyte virus (HTLV-III) , and it has the capacity to replicate within cells of the immune system, causing profound cell destruction.
  • the AIDS virus is a retrovirus, a virus that uses reverse transcriptase during replication. This particular retrovirus is also known as lymphadenopathy-associated virus (LAV) , AIDS-related virus (ARV) and, most recently, as human immunodeficiency virus (HIV) .
  • LAV lymphadenopathy-associated virus
  • ARV AIDS-related virus
  • HIV human immunodeficiency virus
  • HIV is known to exert a profound cytopathic effect on the CD4+ helper/inducer T-cells, thereby severely compromising the immune system. HIV infection also results in neurological deterioration and, ultimately, in the death of the infected individual .
  • anti- retroviral agents such as 3 ' -azido-2 ' , 3 ' -dideoxythymidine (AZT) , 2 ' 3 ' -dideoxycytidine (ddC) , and 2 ' 3 ' -dideoxyinosine (ddl) are known to inhibit reverse transcriptase.
  • antiviral agents that inhibit transactivator protein.
  • Nucleoside analogs, such as AZT are currently available for antiviral therapy. Although very useful, the utility of AZT and related compounds is limited by toxicity and insufficient therapeutic indices for fully adequate therapy .
  • Retroviral protease inhibitors also have been identified as a class of anti-retroviral agents. Retroviral protease processes polyprotein precursors into viral structural proteins and replicative enzymes. This processing is essential for the assembly and maturation of fully infectious virions. Accordingly, the design of protease inhibitors remains an important therapeutic goal in the treatment of AIDS .
  • HIV protease inhibitors in combination with agents that have different antiretroviral mechanisms (e.g., AZT, ddl and ddT) , also has been described.
  • agents that have different antiretroviral mechanisms e.g., AZT, ddl and ddT
  • synergism against HIV-1 has been observed between certain C 2 symmetric HIV inhibitors and AZT (Kageyama et al., Antimicrob. Agents Chemother. , 36, 926-933 (1992)).
  • inhibitors of protease have been designed using the natural cleavage site of the precursor polyproteins as a starting point. These inhibitors typically are peptide substrate analogs in which the scissile Pi-Pi' amide bond has been replaced by a non- hydrolyzable isostere with tetrahedral geometry (Moore et al, Perspect. Drug Dis . Design, 1, 85 (1993) ; Tomasselli et al., Int . J. Chem . Biotechnology, 6 (1991); Huff, J. Med. Chem. , 34, 2305 (1991); Norbeck et al . , Ann . Reports Med. Chem. , 26, 141 (1991); and Meek, J " . Enzyme Inhibi tion, 6, 65 (1992)) . Although these inhibitors are effective in preventing the retroviral protease from functioning, the inhibitors suffer from some distinct disadvantages.
  • peptidomimetics often make poor drugs, due to their potential adverse pharmacological properties, i.e., poor oral absorption, poor stability and rapid metabolism (Plattner et al, Drug Discovery Technologies, Clark et al . , eds., Ellish Horwood, Chichester, England (1990)).
  • active agents contain a non-hydrolyzable, dipeptidic isostere, such as hydroxyethylene (McQuade et al . , supra; Meek, et al . , Nature (London) , 343, 90-92 (1990); and Vacca et al., J. Med. Chem. , 34, 1225-1228 (1991)) or hydroxyethylamine (Ghosh et al . , Bioorg . Med. Chem . Lett . , 8, 687-690 (1998); Ghosh et al . , J. Med. Chem. , 36, 292-295 (1993)); Rich et al . , J. Med. Chem .
  • hydroxyethylene McQuade et al . , supra; Meek, et al . , Nature (London) , 343, 90-92 (1990)
  • Vacca et al. J. Med. Chem. , 34, 1225-1228 (19
  • C 2 symmetric inhibitors of HIV protease represent another class of potent HIV protease inhibitors, which were created by Erickson et al . , on the basis of the three-dimensional symmetry of the enzyme active site
  • HIV protease inhibitors incorporating the 2 , 5-diamino-3 , 4-disubstituted- 1, 6-diphenylhexane isostere are described in Ghosh et al . , Bioorg. Med. Chem . Lett . , 8, 687-690 (1998) and U.S. Patent Nos. 5,728,718 (Randad et al . ) . HIV protease inhibitors, which incorporate the hydroxyethylamine isostere, are described in U.S. Patent Nos.
  • multidrug-resistant HIV strains are typically found in infected patients, who had undergone treatment with a combination of HIV protease inhibitors or a series of different HIV protease inhibitors .
  • the number of reported cases of patients infected with multidrug- resistant HIV is rising dramatically.
  • the available options for AIDS chemotherapy and/or HIV management is severely limited or is, otherwise, completely nonexistent .
  • the present invention provides such inhibitors of multidrug-resistant HIV protease, compositions, synthesis methods, and uses thereof .
  • A is a group of the formula:
  • R 1 is H or an alkyl, an alkenyl, an alkynyl, a cycloalkyl, a cycloalkylalkyl, an aryl, an aralkyl, a heterocycloalkyl, a heterocycloalkylalkyl, a heteroaryl, or a heteroaralkyl radical, in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of OR 7 , SR 7 , CN, N0 2 , N 3 , and a halogen, wherein R 7 is H, an alkyl, an alkenyl , or an alkynyl ; Y and Z are the same or different and are independently selected from the group consisting of CH 2 , 0, S, SO, S0 2 , NR 8 , R 8 C(0)N, R 8 C(S)N, R 8 0C(0)N, R 8 0C(S)N, R 8 SC(0)N, R 8 R
  • X is a covalent bond, CHR 10 , CHR 10 CH 2 , CH 2 CHR 10 , 0, NR 10 , or S, wherein R 10 is H, an alkyl, an alkenyl, or an alkynyl; Q is C(0), C(S), or S0 2 ;
  • R 2 is H, an alkyl, an alkenyl, or an alkynyl; m is an integer from 0 to 6;
  • R 3 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of alkyl, (CH 2 ) p R ⁇ :L , OR 12 , SR 12 , CN, N 3 , N0 2 , NR 12 R 13 , C(0)R 12 , C(S)R 12 , C0 2 R 12 , C(0)SR 12 , C(0)NR 12 R 13 , C(S)NR 12 R 13 , NR 12 C(0)R 13 , NR 12 C(S)R 13 , NR 12 C0 2 R 13 , NR 12 C(0)SR 13 , and a halogen, wherein: p is an integer from 0 to 5;
  • R 11 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OH, 0CH 3 , NH 2 , N0 2 , SH, and CN; and
  • R 12 and R 13 are independently selected from the group consisting of H, an alkyl, an alkenyl, and an alkynyl ;
  • R 5 is H, a Ci-Cg alkyl radical, a C 2 -C 6 alkenyl radical, or (CH 2 ) q R 14 , wherein q is an integer form 0 to 5, and R 14 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl radical in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OH, 0CH 3 , NH 2 , N0 2 , SH, and CN; W is C(O), C(S), S(O), or S0 2 ; and
  • CR 15 N(OR 16 ) , N 3 , N0 2 , NR 15 R 16 , N(OH)R 15 , C(0)R 15 , C(S)R 15 , C0 2 R 15 , C(0)SR 15 , C(0)NR 15 R 16 , C(S)NR 15 R 16 , C (0) N (OH) R 15 , C (S) N (OH) R 15 , NR 15 C(0)R 16 , NR 15 C(S)R 16 , N (OH) C (O) R 15 , N(0H) C (S) R 15 , NR 15 C0 2 R l ⁇ , N(0H)C0 2 R 1S , NR 15 C(0)SR 16 , NR 15 C (0) NR 16 R 17 , and NR 15 C (S) NR 16 R 17 , N(OH)C(0)NR 15 R 16 , N(0H) C (S) NR 15 R 16 , NR 15 C (O) N (OH) R 16 ,
  • R 5 and R 6 are covalently joined together, such that R 5 and R fi together comprise a 12 to 18 membered ring, with or without a heteroatom (e.g., N, 0, or S) within the ring, which ring includes the N-W bond of Formula (I) .
  • a pharmaceutical composition comprising a multidrug-resistant retroviral protease- inhibiting amount of a compound of the present invention (or a pharmaceutically acceptable salt, a prodrug, or an ester thereof) and a pharmaceutically acceptable carrier.
  • the present invention further provides a method of inhibiting the protease of a multidrug-resistant retrovirus in a mammal infected with a protease-producing, multidrug- resistant retrovirus.
  • the method comprises administering a multidrug-resistant, retroviral protease-inhibiting effective amount of a compound of the present invention, so as to inhibit proliferation of the retrovirus in the mammal .
  • Fig. 1 illustrates the synthesis of a particular sulfonamide isostere core of a compound of the present invention.
  • Figure 2 illustrates the synthesis of a bis- tetrahydrofuran ligand and the optical resolution thereof.
  • Fig. 3A illustrates the synthesis of a multidrug- resistant retroviral protease inhibitor of the present invention via coupling of a bis-tetrahydrofuran ligand to a sulfonamide isostere of the present invention.
  • Fig. 3B illustrates the synthesis of a multidrug- resistant retroviral protease inhibitor of the present invention via coupling of a bis-tetrahydrofuran ligand to a sulfonamide isostere of the present invention.
  • Figure 4 illustrates generally the present method of synthesizing a multidrug-resistant inhibitor of the present invention.
  • Figures 5A-5D illustrate the structures of particular compounds that were tested against various drug-resistant HIV mutants .
  • A is a group of the formula:
  • R 1 is H or an alkyl, an alkenyl, an alkynyl, a cycloalkyl, a cycloalkylalkyl, an aryl, an aralkyl, a heterocycloalkyl, a heterocycloalkylalkyl, a heteroaryl, or a heteroaralkyl radical, in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of OR 7 , SR 7 , CN, N0 2 , N 3 , and a halogen, wherein R 7 is H, an alkyl, an alkenyl , or an alkynyl ;
  • Y and Z are the same or different and are independently selected from the group consisting of CH 2 , 0, S, SO, S0 2 , NR 8 , R 8 C(0)N, R 8 C(S)N, R 8 OC(0)N, R 8 OC(S)N,
  • R 8 SC(0)N, R 8 R 9 NC(0)N, and R 8 R 9 NC(S)N wherein R 8 and R 9 are independently selected from the group consisting of H, an alkyl, an alkenyl, and an alkynyl; n is an integer from 1 to 5; X is a covalent bond, CHR 10 , CHR 10 CH 2 , CH 2 CHR 10 , 0, NR 10 , or S, wherein R 10 is H, an alkyl, an alkenyl, or an alkynyl; Q is C(0) , C(S) , or S0 2 ;
  • R 2 is H, an alkyl, an alkenyl, or an alkynyl; m is an integer from 0 to 6; R 3 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of H, alkyl, (CH 2 ) p R 11 OR 12 , SR 12 , CN, N 3 , N0 2 , NR 12 R 13 , C(0)R 12 , C(S)R 12 , C0 2 R 12 , C(0)SR 12 , C(0)NR 12 R 13 , C(S)NR 1 R 13 , NR 1 C(0)R 13 , NR 12 C(S)R 13 , NR 12 C0 2 R 13 , NR 12 C(0)SR 13 , and a halogen, wherein: p is an integer from 0 to 5 ;
  • R 11 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OH, 0CH 3 , NH 2 , N0 2 , SH, and CN; and
  • R 12 and R 13 are independently selected from the group consisting of H, an alkyl, an alkenyl, and an alkynyl;
  • R 5 is H, a Ci-C 6 alkyl radical, a C 2 -C 6 alkenyl radical, or (CH 2 ) q R 14 , wherein q is an integer form 0 to 5, and R 14 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl radical in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OH, OCH 3 ,
  • R 15 , R 16 , and R 17 are H, an unsubstituted alkyl, and an unsubstituted alkenyl, wherein, when at least one hydrogen atom of R 6 is optionally substituted with a substituent other than a halogen, OR 15 , SR 15 , S(0)R 15 , S0 2 R 15 , S0 2 NR 15 R 16 , S0 2 N(OH)R 15 , CN,
  • R 5 and R 6 are covalently joined together, such that R 5 and R 6 together comprise a 12 to 18 membered ring, with or without a heteroatom (e.g., N, 0, or S) within the ring, which ring includes the N-W bond of Formula (I) .
  • a heteroatom e.g., N, 0, or S
  • alkyl means a straight- chain or branched-chain alkyl radical containing from about 1 to about 20 carbon atoms chain, preferably from about 1 to about 10 carbon atoms, more preferably from about 1 to about 8 carbon atoms, still more preferably from about 1 to about 6 carbon atoms .
  • substituents include methyl, ethyl, propyl, isopropyl, n-butyl, sec-butyl, isobutyl, tert-butyl, pentyl, isoamyl, hexyl, octyl, dodecanyl, and the like.
  • alkenyl means a straight-chain or branched- chain alkenyl radical having one or more double bonds and containing from about 2 to about 20 carbon atoms chain, preferably from about 2 to about 10 carbon atoms, more preferably from about 2 to about 8 carbon atoms, still more preferably from about 2 to about 6 carbon atoms.
  • substituents include vinyl, allyl, 1,4-butadienyl, isopropenyl, and the like.
  • alkynyl means a straight-chain or branched- chain alkynyl radical having one or more triple bonds and containing from about 2 to about 20 carbon atoms chain, preferably from about 2 to about 10 carbon atoms, more preferably from about 2 to about 8 carbon atoms, still more preferably from about 2 to about 6 carbon atoms.
  • examples of such radicals include ethynyl, propynyl (propargyl) , butynyl, and the like.
  • alkoxy means an alkyl ether radical, wherein the term “alkyl” is defined as above.
  • alkoxy radicals include methoxy, ethoxy, t-propoxy, isopropoxy, n- butoxy, isobutoxy, sec-butoxy, tert-butoxy, hexanoxy, and the like.
  • alkylthio means an alkyl thioether radical, wherein the term “alkyl” is defined as above.
  • alkylthio radicals include methylthio (SCH 3 ) , ethylthio (SCH 2 CH 3 ) , n-propylthio, isopropylthio, n-butylthio, isobutylthio, sec-butylthio, tert-butylthio, n-hexylthio, and the like.
  • alkylamino means an alkyl amine radical, wherein the term “alkyl” ' is defined as above.
  • alkylamino radicals include methylamino (NHCH 3 ) , ethylamino (NHCH 2 CH 3 ) , n-propylamino, isopropylamino, n-butylamino, isobutylamino, sec-butylamino, tert-butylamino, n- hexylamino, and the like.
  • cycloalkyl means a monocyclic or a polycyclic alkyl radical defined by one or more alkyl carbocyclic rings, which can be the same or different when the cycloalkyl is a polycyclic radical having 3 to about 10 carbon atoms in the carbocyclic skeleton in each ring, preferably about 4 to about 7 carbon atoms, more preferably 5 to 6 carbons atoms.
  • monocyclic cycloalkyl radicals include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, cyclodecyl, and the like.
  • polycyclic cycloalkyl radicals include decahydronaphthyl , bicyclo [5.4.0] undecyl, adamantyl, and the like.
  • cycloalkylalkyl means an alkyl radical as defined herein, in which at least one hydrogen atom on the alkyl radical is replaced by a cycloalkyl radical as defined herein.
  • cycloalkylalkyl radicals include cyclohexylmethyl, 3-cyclopentylbutyl, and the like.
  • heterocycloalkyl means a cycloalkyl radical as defined herein (including polycyclics) , wherein at least one carbon which defines the carbocyclic skeleton is substituted with a heteroatom such as, for example, 0, N, or S, optionally comprising one or more double bond within the ring, provided the ring is not heteroaryl as defined herein.
  • the heterocycloalkyl preferably has 3 to about 10 atoms (members) in the carbocyclic skeleton of each ring, preferably about 4 to about 7 atoms, more preferably 5 to 6 atoms.
  • heterocycloalkyl radicals include epoxy, aziridyl, oxetanyl, tetrahydrofuranyl, dihydrofuranyl, piperadyl, piperidinyl, pyperazyl, piperazinyl, pyranyl, morpholinyl, and the like.
  • heterocycloalkylalkyl means an alkyl radical as defined herein, in which at least one hydrogen atom on the alkyl radical is replace by a heterocycloalkyl radical as defined herein.
  • heterocycloalkylalkyl radicals include 2-morpholinomethyl, 3- (4-morpholino) - propyl, 4- (2 -tetrahydrofuranyl) -butyl, and the like.
  • aryl refers to an aromatic carbocyclic radical, as commonly understood in the art, and includes monocyclic and polycyclic aromatics such as, for example, phenyl and naphthyl radicals, optionally substituted with one or more substituents selected from the group consisting of a halogen, an alkyl, alkoxy, amino, cyano, nitro, and the like.
  • aryloxy means aryl as defined herein, wherein a hydrogen atom is replaced by an oxygen.
  • aryloxy radicals include phenoxy, naphthoxy, 4- flourophenoxy, and the like.
  • arylamino means aryl as defined herein, wherein a hydrogen atom is replaced by an amine .
  • arylamino radicals include phenylamino, naphthylamino, 3- nitrophenylamino, 4-aminophenylamino, and the like.
  • arylthio means aryl as defined herein, wherein a hydrogen atom is replaced by a sulfur atom.
  • arylthio radicals include phenylthio, naphthylthio, 3-nitrophenylthio, 4-thiophenylthio, and the like.
  • aralkyl means alkyl as defined herein, wherein an alkyl hydrogen atom is replaced by an aryl as defined herein.
  • aralkyl radicals include benzyl, phenethyl, 3- (2-naphthyl) -butyl, and the like.
  • aryloxyalkyl means alkyl as defined herein, wherein an alkyl hydrogen atom is replaced by an aryloxy as defined herein.
  • aryloxyalkyl radicals include phenoxyethyl , 4- (3-aminophenoxy) -1-butyl, and the like.
  • arylaminoalkyl means alkyl as defined herein, wherein an alkyl hydrogen atom is replaced by an arylamino as defined herein.
  • arylaminoalkyl radicals include phenylaminoethyl, 4- (3-methoxyphenylamino) - 1-butyl, and the like.
  • aralkoxy means alkoxy as defined herein, wherein an alkyl hydrogen atom is replaced by an aryl as defined herein.
  • aralkoxy radicals include 2- phenylethoxy, 2-phenyl-l-propoxy, and the like.
  • (aryloxy) alkoxy means alkoxy as defined herein, wherein an alkyl hydrogen atom is replaced by an aryloxy as defined herein.
  • Examples of (aryloxy) alkoxy radicals include 2-phenoxyethoxy, 4- (3-aminophenoxy) -1- butoxy, and the like.
  • (arylamino) alkoxy means alkoxy as defined herein, wherein an alkyl hydrogen atom is replaced by an arylamino as defined herein.
  • Examples of (arylamino) alkoxy radicals include 2- (phenylamino) -ethoxy, 2- (2- naphthylamino) -1-butoxy, and the like.
  • (arylthio) alkoxy means alkoxy as defined herein, wherein an alkyl hydrogen atom is replaced by an arylthio as defined herein.
  • Examples of (arylthio) alkoxy radicals include 2- (phenylthio) -ethoxy, and the like.
  • aralkylamino means alkylamino as defined herein, wherein an alkyl hydrogen atom is replaced by an aryl as defined herein.
  • aralkylamino radicals include 2-phenethylamino, 4-phenyl-n-butylamino, and the like.
  • (aryloxy) alkylamino means alkylamino as defined herein, wherein an alkyl hydrogen atom is replaced by an aryloxy as defined herein.
  • (aryloxy) alkylamino radicals include 3-phenoxy-n- propylamino, 4-phenoxybutylamino, and the like.
  • (arylamino) alkylamino means alkylamino as defined herein, wherein an alkyl hydrogen atom is replaced by an arylamino as defined herein.
  • (arylamino) alkylamino radicals include 3- (naphthylamino) -1- propylamino, 4- (phenylamino) -1-butylamino, and the like.
  • (arylthio) alkylamino means alkylamino as defined herein, wherein an alkyl hydrogen atom is replaced by an arylthio as defined herein.
  • (arylthio) alkylamino radicals include 2- (phenylthio) - ethylamino, and the like.
  • aralkylthio means alkylthio as defined herein, wherein an alkyl hydrogen atom is replaced by an aryl as defined herein.
  • aralkylthio radicals include 3-phenyl-2-propylthio, 2- (2-naphthyl) -ethylthio, and the like.
  • (aryloxy) alkylthio means alkylthio as defined herein, wherein an alkyl hydrogen atom is replaced by an aryloxy as defined herein.
  • (aryloxy) alkylthio radicals include 3-phenoxypropylthio, 4- (2-fluorophenoxy) - butylthio, and the like.
  • the term " (arylamino) alkylthio” means alkylthio as defined herein, wherein an alkyl hydrogen atom is replaced by an arylamino as defined herein.
  • Examples of (arylamino) alkylthio radicals include 2- (phenylamino) - ethylthio, 3- (2-naphthylamino) -n-propylthio, and the like.
  • (arylthio) alkylthio means alkylthio as defined herein, wherein an alkyl hydrogen atom is replaced by an arylthio as defined herein.
  • Examples of (arylthio) alkylthio radicals include 2- (naphthylthio) - ethylthio, 3- (phenylthio) -propylthio, and the like.
  • heteroaryl means a radical defined by an aromatic heterocyclic ring as commonly understood in the art, including monocyclic radicals such as, for example, imidazole, thiazole, pyrazole, pyrrole, furane, pyrazoline, thiophene, oxazole, isoxazol, pyridine, pyridone, pyrimidine, pyrazine, and triazine radicals, and also including polycyclics such as, for example, quinoline, isoquinoline, indole, and benzothiazole radicals, which heteroaryl radicals are optionally substituted with one or more substituents selected from the group consisting of a halogen, an alkyl, alkoxy, amino, cyano, nitro, and the like. It will be appreciated that the heterocycloalkyl and heteroaryl substituents can be coupled to the compounds of the present invention via a heteroatom, such as nitrogen (e.g., 1-imidazoly
  • heteroaryloxy means heteroaryl as defined herein, wherein a hydrogen atom on the heteroaryl ring is replaced by an oxygen.
  • Heteroaryloxy radicals include, for example, 4-pyridyloxy, 5-quinolyloxy, and the like.
  • heteroarylamino means heteroaryl as defined herein, wherein a hydrogen atom on the heteroaryl ring is replaced by an nitrogen.
  • Heteroarylamino radicals include, for example, 4-thiazolylamino, 2-pyridylamino, and the like.
  • heteroarylthio means heteroaryl as defined herein, wherein a hydrogen atom on the heteroaryl ring is replaced by a sulfur.
  • Heteroarylthio radicals include, for example, 3-pyridylthio, 3-quinolylthio, 4-imidazolylthio, and the like.
  • heteroaralkyl means alkyl as defined herein, wherein an alkyl hydrogen atom is replaced by a heteroaryl as defined herein.
  • heteroaralkyl radicals include 2-pyridylmethyl, 3- (4-thiazolyl) -propyl , and the like.
  • heteroaralkoxy means alkoxy as defined herein, wherein an alkyl hydrogen atom is replaced by a heteroaryl as defined herein.
  • heteroaralkoxy radicals include 2-pyridylmethoxy, 4- (1-imidazolyl) -butoxy, and the like.
  • heteroaralkylamino means alkylamino as defined herein, wherein an alkyl hydrogen atom is replaced by a heteroaryl as defined herein.
  • heteroaralkylamino radicals include 4-pyridylmethylamino, 3- (2-furanyl) -propylamino, and the like.
  • heteroaralkylthio means alkylthio as defined herein, wherein an alkyl hydrogen atom is replaced by a heteroaryl as defined herein.
  • heteroaralkylthio radicals include 3-pyridylmethylthio, 3- (4-thiazolyl) -propylthio, and the like.
  • R 1 is H or an alkyl, an alkenyl, a cycloalkyl, a cycloalkylalkyl, an aryl, an aralkyl, a heterocycloalkyl, a heterocycloalkylalkyl, a heteroaryl, or a heteroaralkyl radical, in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of OR 7 , SR 7 , CN, N0 2 , N 3 , and a halogen, wherein R 7 is H, an unsubstituted alkyl, or an unsubstituted alkenyl; Y and Z are the same or different and are independently selected from the group consisting of CH 2 , 0, S, SO, S0 2 , NR 8 , R 8 C(0)N, R 8 C(S)N, R 8 OC(0)N, R 8 OC(S)N, R 8 SC(0)
  • R 15 , R 16 , and R 17 are H, an unsubstituted alkyl, and an unsubstituted alkenyl, such that when at least one hydrogen atom of R 6 is optionally substituted with a substituent other than a halogen, OR 15 , SR 15 , CN, N 3 , N0 2 , NR 15 R 16 , C(0)R 15 , C(S)R 15 , C0 2 R 1
  • R 1 is an alkyl or an alkenyl radical (i.e., an alkyl or an alkenyl substituent), then it is a Ci-C 6 alkyl or, in the case when R 1 is an alkenyl, it is a C 2 -C 6 alkenyl.
  • R 1 is a monocyclic substituent such as, for example, a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl, it preferably comprises 4-7 members in the ring that defines the monocyclic skeleton.
  • R 7 , R 8 or R 9 is an unsubstituted alkyl, it is preferably a C j -Cg unsubstituted alkyl; and when R 7 , R 8 or R 9 is an unsubstituted alkenyl, it is preferably a C 2 -C 6 unsubstituted alkenyl.
  • the ring defined by R 3 preferably comprises 4-7 members or, in the case of polycyclics, each ring comprises 4-7 members.
  • R 3 is (CH ⁇ p R 11
  • the ring defined by R 11 preferably comprises 4-7 members, or, in the case of polycyclics, each ring comprises 4-7 members.
  • R 12 or R 13 When either of R 12 or R 13 is an unsubstituted alkyl, it is preferably a Ci-C 6 unsubstituted alkyl, and when either of R 12 or R 13 is an unsubstituted alkenyl, it is a C 2 -C 6 unsubstituted alkyl.
  • R 14 When R 14 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl, the ring defined by R 14 preferably comprises 4-7 members, or, in the case of polycyclics, each ring comprises 4-7 members.
  • R 6 is a cycloalkyl, a heterocycloalkyl, aryl, or a heteroaryl
  • the ring defined by R 6 preferably comprises 4-7 members, or, in the case of polycyclics, each ring comprises 4-7 members, and when R 6 is substituted with a substituent that is an alkyl, an alkylthio, or an alkylamino, it is preferred that the substituent comprises from one to six carbon atoms, and when R 6 is substituted with a substituent that is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl, the ring defined by the substituent preferably comprises 4-7 members or, in the case of polycyclics, each ring comprises 4-7 members .
  • the compound of the present invention is represented by Formula (I), wherein Q is C(0), R 2 is H, and W is C(0) or S0 2 .
  • Q is C(O)
  • R 2 is H
  • R 4 is OH
  • W is S0 2
  • the stereochemical orientation of the asymmetric centers is represented by formula (IA) or (IB) below:
  • R 6 is a monocyclic substituent, preferably an aromatic ring, which is preferably a substituted benzene ring, as illustrated by the formula:
  • Ar is a phenyl which is optionally substituted with a substituent selected from the group consisting of methyl, amino, hydroxy, methoxy, methylthio, hydroxymethyl, aminomethyl , and methoxymethyl .
  • Y and Z are oxygen atoms
  • n is 2
  • the resulting bis-tetrahydrofuranyl ring system has the stereochemical orientation illustrated in Formula (ID) above
  • m is 1
  • R 3 is phenyl, in which case the compound is represented by the formula:
  • X is an oxygen
  • R 5 is isobutyl
  • Ar is a phenyl which is optionally substituted with a substituent selected from the group consisting of methyl, amino, hydroxy, methoxy, methylthio, hydroxymethyl , aminomethyl , and methoxymethyl .
  • Y and Z are oxygen atoms, n is 2, the resulting bis-tetrahydrofuranyl ring system has the stereochemical orientation illustrated in Formula (1C) above, m is 1, and R 3 is phenyl, in which case the compound is represented by the formula:
  • Ar is a phenyl which is optionally substituted with a substituent selected from the group consisting of methyl, amino, hydroxy, methoxy, methylthio, hydroxymethyl, aminomethyl , and methoxymethyl .
  • IE compound of Formula
  • IF compound of Formula
  • Ar is a phenyl that is optionally substituted with a substituent selected from the group consisting of methyl, amino, hydroxy, methoxy, methylthio, hydroxymethyl, aminomethyl, and methoxymethyl
  • X is an oxygen. Still more preferably, X is oxygen and R 5 is isobutyl.
  • the Ar substituent includes phenyl substituents that are substituted at the para position, the ortho position, and/or the meta position. Examples of compounds substituted with suitable Ar substituents are shown in Table 4, and in Figures 3 and 5A-5D.
  • a pharmaceutical composition comprising a pharmaceutically acceptable carrier and a retroviral protease-inhibiting, particularly a multidrug-resistant retroviral protease-inhibiting, effective amount of at least one compound of the present invention, alone or in combination with another antiretroviral compound such as, for example, a wild-type HIV protease inhibitor, a mutant HIV retroviral protease inhibitor, or a reverse transcriptase inhibitor.
  • the pharmaceutical composition of the present invention comprises a multidrug- resistant retroviral protease-inhibiting effective amount of at least one compound of Formula (I) , as disclosed herein, and a pharmaceutically acceptable carrier.
  • the pharmaceutical composition of the present invention comprises a multidrug-resistant retroviral protease-inhibiting effective amount of at least one compound of Formula (IA) or Formula (IB) , or a pharmaceutically acceptable salt, prodrug, or ester thereof, and a pharmaceutically acceptable carrier.
  • the present pharmaceutical composition comprises a multidrug-resistant retroviral protease-inhibiting effective amount of at least one compound of Formula (IC) or Formula (ID) , or a pharmaceutically acceptable salt, prodrug, or ester thereof, and a pharmaceutically acceptable carrier.
  • the present pharmaceutical composition comprises a multidrug-resistant retroviral protease-inhibiting effective amount of at least one compound of Formula (IE) , and pharmaceutically acceptable salts, prodrugs, and esters thereof, and a pharmaceutically acceptable carrier.
  • Pharmaceutically acceptable carriers are well-known to those who are skilled in the art. The choice of a carrier will be determined in part by the particular composition, as well as by the particular mode of administration. Accordingly, there are a wide variety of suitable formulations of the pharmaceutical compositions of the present invention.
  • compositions of the present invention may be in a form suitable for oral use such as, for example, tablets, troches, lozenges, aqueous or oily suspensions or solutions, dispersible powders or granules, emulsions, hard or soft capsules, syrups or elixirs.
  • compositions intended for oral use may be prepared according to any method known in the art form the manufacture of pharmaceutical compositions, and such compositions can contain one or more agents such as, for example, sweetening agents, flavoring agents, coloring agents, and preserving agents in order to provide a pharmaceutically elegant and/or palatable preparation.
  • Tablets can contain the active ingredient in admixture with non-toxic pharmaceutically acceptable excipients which are suitable for manufacture of tablets.
  • excipients can be, for example, inert diluents such as, for example, calcium carbonate, lactose, calcium phosphate or sodium phosphate; granulating and disintegrating agents such as, for example, maize starch or alginic acid; binding agents such as, for example, starch, gelatine or acacia, and lubricating agents such as, for example, stearic acid or talc.
  • the tablets may be uncoated or they may be coated by known techniques to delay disintegration and absorption in the gastrointestinal tract and thereby provide a sustained action over a longer period.
  • a time delay material such as glyceryl monostearate or glyceryl distearate alone or with a wax may be employed.
  • Formulations for oral use also can be presented as hard gelatin capsules wherein the active ingredient is mixed with an inert solid diluent, for example calcium carbonate, calcium phosphate or kaolin, or as soft gelatin capsules wherein the active ingredient is mixed with water or an oil medium, for example arachis oil, peanut oil, liquid paraffin or olive oil.
  • an inert solid diluent for example calcium carbonate, calcium phosphate or kaolin
  • water or an oil medium for example arachis oil, peanut oil, liquid paraffin or olive oil.
  • Aqueous suspensions typically contain the active materials in admixture with excipients suitable for the manufacture of aqueous suspensions.
  • excipients are suspending agents, for example, sodium carboxymethyl cellulose, methylcellulose, hydroxypropylmethylcellulose, sodium alginate, polyvinylpyrrolidone, gum tragacanth and gam acacia; dispersing or wetting agents may be a natural- occurring phosphatide, for example, lecithin, or condensation products of an alkylene oxide with fatty acids, for example polyoxyethylene stearate, or condensation products of ethylene oxide with long chain aliphatic alcohols, for example heptadecaethyleneoxycetanol , or condensation products of ethylene oxide with partial esters derived from fatty acids and a hexitol such as polyoxyethylene sorbitol monooleate, or condensation products of ethylene oxide with partial esters derived from fatty acids and hexitol anhydrides, for example polyoxyethylene sorbit
  • the aqueous suspensions also can contain one or more preservatives, for example, ethyl or n-propyl p-hydroxy benzoate, one or more coloring agents, one or more flavoring agents and one or more sweetening agents such as, for example, sucrose or saccharin.
  • Oily suspensions may be formulated by suspending the active ingredient in a vegetable oil, for example arachis oil, olive oil, sesame oil or coconut oil, or in a mineral oil such as liquid paraffin.
  • the oil suspensions may contain a thickening agent, for example beeswax, hard paraffin or cetyl alcohol.
  • Sweetening agents, such as those set forth above, and flavoring agents may be added to provide a palatable oral preparation.
  • These compositions can be preserved by the addition of an antioxidant such as, for example, ascorbic acid.
  • Dispersible powders and granules suitable for preparation of an aqueous suspension by the addition of water provide the active ingredient in admixture with a dispersing or wetting agent, suspending agent and one or more preservatives.
  • a dispersing or wetting agent e.g., glycerol, glycerol, glycerol, glycerol, glycerol, glycerol, glycerin, glycerin, glycerin, glycerin, glycerin, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, sorbitol, glycerol, glycerol, glycerol, glycerol, glycerol, glycerol, glycerol, glycerol, glycerol
  • the pharmaceutical compositions of the present invention also can be in the form of oil-in-water emulsions.
  • the oily phase can be a vegetable oil, for example, olive oil or arachis oils, or a mineral oil, for example liquid paraffin or mixtures of these.
  • Suitable emulsifying agents may be naturally-occurring gums, for example gum acacia or gum tragacantn, naturally-occurring phosphatides, for example soya bean lecithin, and esters or partial esters derived from fatty acids and hexitol anhydrides, for example sorbitan mono-oleate, and condensation products of the said partial esters and ethylene oxide, for example polyoxyethylene sorbitan mono-oleate.
  • the emulsions also can contain sweetening and flavoring agents.
  • compositions of the present invention also can be in the form of syrups and elixirs, which are typically formulated with sweetening agents such as, for example, glycerol, sorbitol or sucrose. Such formulations also can contain a demulcent, a preservative and flavoring and coloring agents.
  • the pharmaceutical compositions can be in the form of a sterile injectable preparation, for example, as a sterile injectable aqueous or oleagenous suspension. Suitable suspensions for parenteral administration can be formulated according to the known art using those suitable dispersing or wetting agents and suspending agents which have been mentioned above.
  • Formulations suitable for parenteral administration include, for example, aqueous and non- aqueous, isotonic sterile injection solutions, which can contain anti-oxidants, buffers, bacteriostates, and solutes that render the formulation isotonic with the blood of the intended recipient, and aqueous and non-aqueous sterile suspensions that can include suspending agents, solubilizers, thickening agents, stabilizers, and preservatives.
  • the sterile injectable preparation can be a solution or a suspension in a non-toxic parenterally- acceptable diluent or solvent, for example, as a solution in water or 1, 3-butanediol .
  • acceptable vehicles and solvents that can be employed, for example, are water, Ringer's solution and isotonic sodium chloride solution.
  • sterile, fixed oils are conventionally employed as a solvent or suspending medium.
  • any bland fixed oil can be employed including synthetic mono- or diglycerides .
  • fatty acids such as, for example, oleic acid find use in the preparation of injectables.
  • the compounds of the present invention also can be administered in the form of suppositories for rectal administration of the drug.
  • These compositions can be prepared by mixing the drug with a suitable non-irritating excipient which is solid at ordinary temperatures but liquid at the rectal temperature and will therefore melt in the rectum to release the drug.
  • a suitable non-irritating excipient which is solid at ordinary temperatures but liquid at the rectal temperature and will therefore melt in the rectum to release the drug.
  • Such materials include, for example, cocoa butter and polyethylene glycols.
  • Formulations suitable for vaginal administration can be presented as pessaries, tampons, creams, gels, pastes, and foams .
  • Formulations suitable for topical administration may be presented as creams, gels, pastes, or foams, containing, in addition to the active ingredient, such carriers as are known in the art to be appropriate.
  • the multidrug-resistant retroviral protease inhibitors of the present invention can be made into aerosol formulations to be administered via inhalation.
  • aerosol formulations can be placed into pressurized acceptable propellants, such as dichlorodifluoromethane, propane, nitrogen, and the like. They also can be formulated as pharmaceuticals for non-pressured preparations such as in a nebulizer or an atomizer.
  • the formulations can be presented in unit-dose or multi-dose sealed containers, such as ampules and vials, and can be stored in a freeze-dried (lyophilized) condition requiring only the addition of the sterile liquid excipient, for example, water, for injections, immediately prior to use.
  • Extemporaneous injection solutions and suspensions can be prepared from sterile powders, granules, and tablets of the kind previously described.
  • any suitable dosage level can be employed in the pharmaceutical compositions of the present invention.
  • the dose administered to an animal, particularly a human, in the context of the present invention should be sufficient to effect a prophylactic or therapeutic response in the animal over a reasonable time frame.
  • the amount of active ingredient that can be combined with the carrier materials to produce a single dosage form will vary depending upon the host treated and the particular mode of administration.
  • the size of the dose also will be determined by the existence, nature, and extent of any adverse side-effects that might accompany the administration of a particular composition. Suitable doses and dosage regimens can be determined by comparisons to antiretroviral chemotherapeutic agents that are known to inhibit the proliferation of a retrovirus in an infected individual.
  • the preferred dosage is the amount which results in inhibition of retroviral proliferation, particularly the proliferation of multidrug-resistant retroviral HIV, without significant side effects.
  • the present invention provides for a wide range of antiretroviral chemotherapeutic compositions.
  • the multidrug-resistant retroviral protease inhibitors of the present invention also can be administered in combination with other antiretroviral compounds such as, for example, ritonavir, amprenavir, saquinavir, indinavir, AZT, ddl, ddC, D4T, lamivudine, 3TC, and the like, as well as admixtures and combinations thereof, in a pharmaceutically acceptable carrier.
  • the individual daily dosages for these combinations can range from about one-fifth of the minimally recommended clinical dosages to the maximum recommended levels for the entities when they are given singly.
  • the present invention also provides a method of inhibiting the protease of a multidrug-resistant retrovirus in a mammal infected with a protease-producing, multidrug- resistant retrovirus, which method comprises administering to the mammal a multidrug-resistant, retroviral protease- inhibiting effective amount of a compound of the present invention, so as to inhibit the proliferation of the retrovirus in the mammal.
  • the present invention provides a method of treating a retroviral, particularly an HIV, infection and, more particularly, a multidrug-resistant HIV infection, in a mammal, particularly a human, wherein a protease-inhibiting effective amount of one or more of the present inventive compounds, alone or in combination with one or more other antiretroviral therapies or compounds, such as AZT, ddl, ddC, D4T, lamivudine or 3TC, is administered to a mammal infected with a retrovirus, particularly HIV, and more particularly multidrug-resistant HIV, the proliferation of which is inhibited by a retroviral protease-inhibiting effective amount of a present inventive compound.
  • the dose administered to an animal, particularly a human in the context of the present invention should be sufficient to effect a therapeutic response in the animal over a reasonable time frame.
  • the dose will be determined by the strength of the particular composition employed and the condition of the animal, as well as the body weight of the animal to be treated.
  • the size of the dose will also be determined by the existence, nature, and extent of any adverse side-effects that might accompany the administration of a particular compound. Other factors which effect the specific dosage include, for example, bioavailability, metabolic profile, and the pharmacodynamics associated with the particular compound to be administered in a particular patient.
  • the specific dosage level for any particular patient will depend upon a variety of factors including, for example, the activity of the specific compound employed, the age, body weight, general health, sex, diet, time of administration, route of administration, rate of excretion, drug combination, CD4 count, the potency of the active compound with respect to the particular retroviral strain to be inhibited, and the severity of the symptoms presented prior to or during the course of therapy.
  • a retroviral protease-inhibiting amount more particularly a HIV protease-inhibiting amount, and more particularly a multidrug-resistant HIV protease-inhibiting amount, of one or more compounds of the present invention, alone or in combination with one or more other currently available antiretroviral compounds can be determined, in part, by use of one or more of the assays described herein.
  • whether or not a given retrovirus is inhibited by a retroviral protease-inhibiting amount of a compound of the present invention can be determined through the use of one or more of the assays described herein or in the scientific literature or as known to one of ordinary skill in the art.
  • One skilled in the art will appreciate that suitable methods of administering the compounds and pharmaceutical compositions of the present invention to an animal are available, and, although more than one route can be used to administer a particular composition, a particular route can provide a more immediate and more effective reaction than another route .
  • One or more of the present inventive compounds, alone or in combination with one or more other antiretroviral therapies or compounds, can be administered to a mammal, in particular a human, as a prophylactic method to prevent retroviral, particularly multidrug-resistant retroviral, such as multidrug-resistant HIV, infection.
  • the present method of inhibiting the retroviral protease of a multidrug-resistant retrovirus in a mammal comprises administering to the mammal a multidrug- resistant, retroviral protease-inhibiting effective amount of at least one compound of Formula (I) as disclosed herein.
  • the present method of inhibiting the retroviral protease of a multidrug-resistant retrovirus in a mammal comprises administering to the mammal a multidrug-resistant, retroviral protease- inhibiting effective amount of at least one compound of Formula (IA) or Formula (IB) , or a pharmaceutically acceptable salt, prodrug, or ester thereof.
  • the present method of inhibiting the retroviral protease of a multidrug-resistant retrovirus in a mammal comprises administering to the mammal a multidrug- resistant, retroviral protease-inhibiting effective amount of at least one compound of Formula (IC) or Formula (ID) , or a pharmaceutically acceptable salt, prodrug, or ester thereof.
  • the present method of inhibiting the retroviral protease of a multidrug-resistant retrovirus in a mammal comprises administering to the mammal a multidrug-resistant, retroviral protease-inhibiting effective amount of at least one compound of Formula (IE) , or a pharmaceutically acceptable salt, prodrug, or ester thereof.
  • IE compound of Formula
  • compound 32 which is a potent wild-type HIV inhibitor, possesses remarkably potent and unprecedented broad-spectrum antiviral activity against a wide range of clinically isolated, multiply drug-resistant, human immunodeficiency viruses.
  • the mutant viruses were obtained from infected humans who had received several antiviral drugs.
  • protease inhibitory activity of the compounds of the present invention can be measured by any suitable means.
  • protease inhibitory activity is determined by a continuous fluorogenic assay for measuring the anti-HIV protease activity of a protease inhibitor, which method comprises adding a solution of HIV protease to a substrate stock solution, in which the substrate has the formula Ala-Arg-Val-Tyr-Phe (N0 2 ) -Glu-Ala-Nle-NH 2 , to provide a substrate reaction solution.
  • the fluorescence of the substrate reaction solution is then measured at specified time intervals.
  • the solution of HIV protease is then added to a solution of the protease inhibitor and the substrate stock solution, to provide an inhibitor-substrate reaction solution.
  • the fluorescence of the inhibitor-substrate reaction solution is then measured at specified time intervals.
  • the initial velocity of the inhibitor-substrate reaction solution is then calculated by applying the equation:
  • V V 0 /2E t ( ⁇ [Ki (1+S/K +I t -E t ] 2 +4Ki (1+S/K E t ⁇ 1/2 - [K, ( (1+S/K +I t - E t ] )
  • V is the initial velocity of the inhibitor reaction solution
  • V 0 is the initial velocity of the substrate reaction solution
  • K is the Michaelis-Menten constant
  • S is the substrate concentration
  • E t is the protease concentration
  • I t is the inhibitor concentration .
  • the continuous fluorogenic assay described herein is highly sensitive and particularly useful for the prediction of the antiviral inhibitory activity of a compound against mutant HIV, more particularly multiple mutant HIV, specifically multidrug-resistant human immunodeficiency viruses. This assay is distinctly advantageous in that it is more sensitive than standard assays in determining the activity of protease inhibitors against multidrug-resistant HIV.
  • the continuous flourogenic assay described herein is disclosed in more detail in Example 13.
  • the IC 50 's were measured against a panel of clinically isolated mutant HIV isolates.
  • the IC 50 's were determined by utilizing the PHA-PBMC exposed to HIV-1 (50 TCID S0 dose/lX10 6 PBMC) as target cells and using the inhibition of p24 Gag protein production as an endpoint .
  • the assay protocol for determining the multidrug-resistant retroviral inhibitory activity of the compounds of the present invention is disclosed in more detail in Example 14.
  • the present invention further provides a method of synthesizing the multidrug-resistant, retroviral protease- inhibiting compounds of the present invention.
  • the present synthesis method is generally illustrated in Figure 4, which is a representation of the synthetic approach to preparing a preferred series of the present compounds, wherein a compound of Formula (I) is synthesized in several steps starting from azidoepoxide (i) , wherein R 1 -R 17 , m, n, p, Q,
  • amine (ii) is nucleophilically added to azidoepoxide (i) , providing aminoalcohol (iii) .
  • the amine functional group of aminoalcohol (iii) is then reacted with intermediate (iv) , wherein L represents a leaving group (e.g., halogen, N- oxysuccinimide) , which can be displaced by the amine of aminoalcohol (iii) , to provide azide (v) .
  • L represents a leaving group (e.g., halogen, N- oxysuccinimide)
  • R s e.g., NH 2
  • R s e.g., NH 2
  • an appropriate protecting group thereon e.g., benzyloxycarbonyl , tert-butoxycarbonyl
  • Figures 1-3B illustrate the synthesis of a preferred series of compounds of the present invention.
  • Figure 1 which is a synthetic scheme for the synthesis of a particular sulfonamide, illustrates the synthesis of a preferred isosteric core, particularly, the sulfonamide isosteric core represented by aminosulfonamide 15.
  • aminosulfonamide core 15 can be synthesized by initially providing azidoepoxide 11 and subjecting it to nucleophilic addition with amine 12 to give aminoalcohol 13, which is subsequently converted to sulfonamide 14 by reaction with 4-methoxybenzenesulfonyl chloride. The azide group of 14 is then reduced to provide aminosulfonamide 15, which can be used as a core for synthesizing numerous multidrug-resistant retroviral protease inhibitors of the present invention.
  • FIG 2 which is a reaction scheme detailing the preparation of bicyclic alcohols, illustrates the synthesis of a preferred series of bicyclic ligands, particularly bis- tetrahydrofurans 25 and 26.
  • dihydrofuran 21 is treated with N-iodosuccinimide in the presence of propargyl alcohol to give iodoether 22, which is cyclized to methylene-substituted bis-tetrahydrofuran 23.
  • Figures 3A and 3B which are reaction schemes describing the preparation of two protease inhibitors, illustrate the preparation of two preferred multidrug- resistant HIV protease inhibitors of the present invention.
  • compound 32 was synthesized by coupling succinimidocarbonate 31 with aminosulfonamide 15.
  • Succinimidocarbonate 31 was prepared by reacting optically pure bicyclic alcohol 25 with disuccinimidyl carbonate in the presence of triethylamine.
  • Inhibitor 34 which possesses the enantiomeric bis-tetrahydrofuranyl ligand (relative to inhibitor 32) , was prepared in the same fashion, except that the enantiomeric bicyclic alcohol 27 was used instead of alcohol 25, as illustrated in Figure 3B.
  • the following examples further illustrate the present invention but, of course, should not be construed as in any way limiting its scope.
  • reaction mixture was cooled to -78 °C and 0.58 mole of phenylmagnesium bromide solution in ether was added dropwise for 30 min.
  • the reaction mixture was allowed to warm to 23 °C for 1 h.
  • the reaction was quenched by slow addition of saturated aqueous NH 4 C1 (120 mL) followed by NH 4 0H (70 mL) , saturated NH 4 C1 (500 ML) and then H 2 0 (300 mL) .
  • the aqueous layer was thoroughly extracted with ethyl acetate (2 x 300 mL) .
  • the combined organic layers were dried over anhydrous Na 2 S0 4 , filtered, and concentrated under reduced pressure.
  • azidoalcohol 13 800 mg as an oil.
  • This example illustrates the preparation of aminosulfonamide 15 via reduction of azidosulfonamide 14, as shown in Figure 1.
  • a solution of 14 (1.53 g) in THF (45 mL) , MeOH (10 mL) and acetic acid (0.5 mL) was shaken with 10% palladium on carbon catalyst (200 mg) at 50 psi hydrogen pressure for 2 h. Removal of the catalyst by filtration over celite and concentration under reduced pressure gave a crude residue, which was diluted with CH 2 C1 2 (100 mL) , and was washed successively with saturated aqueous NaHC0 3 and brine. The organic layer was dried over MgS0 4 and concentrated to give the corresponding aminosulfonamide 15 (1.2 g) .
  • Example 6 This example illustrates the synthesis of ( ⁇ ) - (3aR, 6aS) and (3aS, 6aR) -3-methylene-4H-hexahydrofuro- [2, 3- b] furan 23, as shown in Figure 2.
  • tributyltin hydride containing AIBN 100 mg
  • toluene 200 mL
  • iodotetrahydrofuran 22 15 mL
  • the resulting mixture was stirred at reflux for an additional 4 h (monitored by TLC) .
  • a stream of ozone was dispersed into a solution of 15 (5.84 g, 46.4 mmol) at -78 °C in 150 mL of methanol and 150 mL of CH 2 Cl 2 for 30 min.
  • the resulting blue solution was purged with nitrogen until colorless, then quenched with 20 mL of dimethyl sulfide and the resulting mixture was allowed to warm to 23 °C.
  • the mixture was concentrated under reduced pressure to afford the crude ketone .
  • the resulting crude ketone was dissolved in ethanol (50 mL) and the solution was cooled to 0 °C and sodium borohydride (2.1 g, 55.6 mmol) was added.
  • the reaction mixture was stirred for an additional 2 h at 0 °C and then quenched with 10% aqueous citric acid (10 mL) .
  • the resulting mixture was concentrated under reduced pressure and the reside was partitioned between ethyl acetate and brine. The layers were separated and the aqueous layer was extracted with ethyl acetate (2 x 100 mL) .
  • the combined organic layers were dried over anhydrous-Na 2 S0 4 and concentrated carefully under reduced pressure.
  • the resulting residue was chromatographed over silica gel using 30% ethyl acetate in hexane as the eluent to furnish (4.52 g, 75%) the title racemic alcohol 24 as an oil.
  • This example demonstrates the synthesis of (3R,3aS, 6aR) 3-hydroxyhexahydrofuro [2, 3-b] furan 25 by immobilized lipase catalyzed acylation, as illustrated in Figure 2.
  • racemic alcohol 24 (2 g, 15.4 mmol) and acetic anhydride (4 g, 42.4 mmol) in 100 mL of DME was added 2.7 g (about 25% by weight of lipase PS30) of immobilized Amano lipase and the resulting suspension was stirred at 23 °C.
  • the reaction was monitored by TLC and B. NMR analysis until 50% conversion was reached.
  • Acetate 26 was dissolved in THF (5mL) and 1 M aqueous LiOH solution (20 mL) was added to it. The resulting mixture was stirred at 23 °C for 3 h and the reaction was extracted with chloroform (3 x 25 mL) . The combined organic layers were dried over anhydrous Na 2 S0 4 and evaporated under reduced pressure . The residue was chromatographed over silica gel to provide 733 mg of 27 (97% ee; ⁇ D 23 ° -12.5°, MeOH) .
  • This example illustrates the preparation of multidrug- resistant HIV inhibitor 32, as illustrated in Figure 3A.
  • This example illustrates the preparation of multidrug- resistant HIV inhibitor 33, as illustrated in Figure 3B.
  • This example describes the protocol for the sensitive continuous fluorogenic assay for HIV protease described above and its application.
  • the inhibitory activity of compound 32 (Fig. 3A) was tested against the proteases of wild-type HIV-1 (WT) and various mutant strains: D30N, V32I, I84V, V32I/I84V, M46F/V82A, G48V/L90M, V82F/I84V, V82T/I84V, V32I/K45I/F53L/A71V/I84V/L89M,
  • V32I/L33F/K45I/F53L/A71V/I84V, and 20R/36I/54V/71V/82T which protease enzymes are available from Dr. John W. Erickson, Structural Biochemistry Program, SAIC, Frederick, P.O. Box B, Federick, MD 21702-1201, upon written request.
  • the inhibition constant for wild-type HIV-1 , K imnt /K iwt ratio, and the vitality was measured. (See Gulnik et al . , Biochemistry, 34 , 9282-9287 (1995) .
  • Protease activity was measured using the fluorgenic substrate Lys-Ala-Arg-Val- Tyr-Phe (N0 2 ) -Glu-Ala-Nle-NH 2 (Bachem Bioscience, Inc.). (See Peranteau et al . , D.H. (1995) Anal . Biochem. ) .
  • the initial rate of hydrolysis was calculated by second degree polynomial fit using SLM AB2 2.0 operating software.
  • Kinetic parameters were determined by nonlinear regression-fitting of initial rate versus substrate concentration data to the Michaelis-Menten equation using program Enzfiter version 1.05.
  • inhibitors were prepared as stock solutions at different concentrations in dimethylsulfoxide .
  • 485 ⁇ l of 0.125 M ACES-NaOH buffer, pH 6.2, containing 1.25 M (NH 4 ) 2 S0 4 , 6.25 mM DTT AND 0.1% PEG-8000 was mixed with 5 ⁇ l of inhibitor stock solution and 5 ⁇ l of titrated protease (final concentration of 1-5 nM) and preincubated 3 min at 37 °C.
  • the reaction was initiated by the addition of 5 ⁇ l of substrate stock solution in water.
  • the mathematical model for tight-binding inhibitors was used. (See Williams and Morrison (1979) , In: Methods of Enzymol. 63, (ed. D.L. Purich) , 437-467, Academic Press,
  • This example illustrates the potent and broad-spectrum multidrug-resistant antiretroviral activity of an exemplary compound of the present invention.
  • Compound 32 shown in Figure 3A, was tested side-by- side with four other known HIV-1 protease inhibitors against various wild-type HIV-1 strains (HIV-l ERS104pre , HIV- l Lfa , and HIV-1 BAL ) , and mutant multidrug-resistant HIV-1 strains clinically isolated from patients receiving several antiviral drugs.
  • the patients from which the mutant strains were isolated had a history of anti-HIV therapy with a variety of different drugs such as, for example, ritonavir, saquinavir, indinavir, amprenavir, AZT, ddl, ddC, d4T, 3TC, ABV (abacavir) , DLV (delaviridine) , and PFA (foscarnet) .
  • drugs such as, for example, ritonavir, saquinavir, indinavir, amprenavir, AZT, ddl, ddC, d4T, 3TC, ABV (abacavir) , DLV (delaviridine) , and PFA (foscarnet) .
  • the patient profiles are shown below in Table 2.
  • ABV IDV
  • SQV SQV
  • RTV AMV
  • the four known chemotherapeutic HIV protease inhibitors used for comparative purposes in this example have been utilized in actual human HIV chemotherapy, and are: Ritonavir ("RTV,” Abbott Laboratories); Indinavir (“IDV,” Merck Research Laboratories); Amprenavir (AMV, See Ghosh et al . , Bioorg. Med. Chem. Lett . , 8, 687-690 (1998)); and Saquinavir ("SAQ", Roche Research Centre).
  • the IC 50 values ( ⁇ M) for all five compounds were determined with respect to wild-type and multidrug-resistant HIV-1.
  • the IC 50 's were determined by utilizing the PHA-PBMC exposed to HIV-1 (50 TCID 50 dose/lX10 6 PBMC) as target cells and using the inhibition of p24 Gag protein production as an endpoint . All drug sensitivities were performed in triplicate. In order to determine whether the HIV isolates were SI or NSI, an aliquot of viral stock supernatant, containing 100 TCID S0 , was cultured with 1 X 10 5 MT-2 cells in a 12-well plate. Cultures were maintained for four weeks and were examined for syncytium formation twice a week. The results are shown below in Table 3.
  • IC 50 clearly demonstrate the broad-spectrum and extraordinarily potent activity of compound 32 against wild-type HIV-1 and the eight different multidrug-resistant clinical isolates tested.
  • compound 32 exhibits nanomolar and sub-nanomolar potency against all the multidrug-resistant strains tested, whereas Ritonavir, a reasonably potent wild-type inhibitor, is virtually inactive toward the resistant viruses.
  • compound 32 is about 9 to about 150 times more potent against the multidrug-resistant viruses than Saquinavir, one of the most potent known compounds against known multidrug-resistant strains of HIV-1.
  • Patients with viral plasma loads greater than 10,000 RNA copies/mm 3 are at risk for developing fatal AIDS complications. There are no effective therapeutic options currently available for these patients infected with these multidrug resistant viruses.
  • Compound 32, and analogs thereof are predicted to be potent inhibitors of these viral strains in vivo.
  • This example demonstrates the wild-type antiretroviral activity of the compounds of the present invention.
  • This example demonstrates the oral absorption of compound 32 in an in vivo experimental model .
  • Compound 32 was orally administered to a rat at a dose of about 40 mg per kg body mass, using a PEG 300 vehicle as a carrier.
  • the plasma blood levels of compound 32 were measured over a 24 h period after oral administration. The results are shown in Table 5 below.
  • This example describes the inhibitory activity of compounds 35 (Fig. 5A) , 36 (Fig. 5B) , 37 (Fig. 5C) and 38 (Fig. 5D) .
  • the inhibitory activity of these compounds was tested against proteases of the wild-type HIV-1.
  • Compound 36, 37 and 38 were also tested against proteases containing the deleterious drug resistance associated mutations V82F/I84V and G48V/V82A. The results of these experiments are shown below in Table 7.
  • the IC 50 values ( ⁇ M) for all compounds 32, 35, 36, 37, and 38 were determined with respect to wild type clinical isolates HIV-l ⁇ j and HIV-l BaL .
  • the latter is a monocytotropic strain of HIV.
  • the IC 50 's for isolates were determined by exposing the PHA-simulated PBMC to HIV-1 (50 TCID 50 dose/lXlO 6 PBMC) , in the precence of various concentrations of compounds 32, 35, 36, 37 and 38, and using the inhibition of p24 Gag protein production as an endpoint on day 7 of culture ("p24 assay"). All drug sensitivities were performed in triplicate.
  • the IC 50 's for isolate HIV-l ⁇ were also determined by exposing MT-2 cells (2xl0 3 ) to 100 TCID 50 s of HIV-1 ⁇ cultured in the presence of various concentrations of compounds 32, 35, 36, 37 and 38.
  • the IC 50 's were determined using the MTT assay on day 7 of culture. All sensitivities were determined in duplicate. The results are shown below in Table 8.
  • HIV-l ⁇ I MT-2 /MTT 0.00022 0.028 0.017 0.0053 0.028
  • Example 20 This example further illustrates the potent and broad- spectrum multidrug-resistant antiretroviral activity of an exemplary compound of the present invention.
  • Compound 32 shown in Figure 3A, was tested against various mutant multidrug-resistant HIV-1 strains clinically isolated from patients. These isolates were all taken from patients who failed therapy on one or more HIV protease inhibitors due to high level clinical resistance. All of these isolates exhibit high level phenotypic resistance in antiviral assays against many of the commonly use HIV protease inhibitor drugs. Compound 32 was tested against these multidrug-resistant clinical isolates side-by-side with known drugs that are commonly used in HIV antiviral therapy, including reverse transcriptase inhibitors such as AZT, 3TC, DDI, DDC, and D4T, and protease inhibitors such as Indinavir (Ind.), Nelfinavir (Nel .
  • reverse transcriptase inhibitors such as AZT, 3TC, DDI, DDC, and D4T
  • protease inhibitors such as Indinavir (Ind.), Nelfinavir (Nel .
  • the mutations in the protease and reverse transcriptase of the multidrug- resistant viruses isolated from each patient are shown below in Table 9b.
  • H208Y L210 8 PR V003I LOIOI I015V M036I S037D G048V I054V D060E Q061E I062V I064V A071V V082A
  • the results of this experiment further show the effectiveness of an exemplary compound of the present invention against a wide range of viral mutants compared to other well- known inhibitors .
  • These mutant viruses represent a panel of the most broadly cross resistant clinical isolates known to date based on their resistance to therapeutically used HIV protease inhibitors.
  • Compound 32 was consistently potent against all of the clinically isolated mutant viruses tested, and was significantly more potent against these multidrug resistant viruses than the comparative drugs which are currently used in human HIV-1 therapy.
  • Compound 32 was ten to one-thousand times more potent against these multidrug resistant viruses than even saquinavir, one of the most potent known compounds against multidrug-resistant HIV-1.

Abstract

The present invention generally provides a retroviral protease-inhibiting compound represented by formula (I), or a pharmaceutically acceptable salt, a prodrug, or an ester thereof, wherein A is a group of formula (II), (III), (IV), or (V); R?1, R2, R3, R5, or R6¿ is H, or an optionally substituted and/or heteroatom-bearing alkyl, alkenyl, alkynyl, or cyclic group; Y and/or Z are CH¿2?, O, S, SO, SO2, amino, amides, carbamates, ureas or thiocarbonyl derivatives thereof, optionally substituted with an alkyl, alkenyl, or alkynyl group; n is from 1 to 5; X is a bond, an optionally substituted methylene or ethylene, an amino, O or S; Q is C(O), C(S), or SO2; m is from 0 to 6; R?4¿ is OH, =O (keto), NH¿2?, or alkylamino, including esters, amides, and salts thereof; and W is C(O), C(S), S(O), or SO2; wherein the compound inhibits a multidrug-resistant retroviral protease. Optionally, R?5 and R6¿, together the N-W bond of formula (I), comprise a 12- to 18-membered ring. Also provided are pharmaceutical compositions for, and therapeutic methods of, treating a multidrug-resistant retroviral infection in a mammal.

Description

MULTIDRUG-RESISTANT RETROVIRAL PROTEASE INHIBITORS AND
ASSOCIATED METHODS
STATEMENT AS TO RIGHTS TO INVENTIONS MADE UNDER FEDERALLY SPONSORED RESEARCH AND DEVELOPMENT
This invention was made with Government support under Grant Number GM53386 awarded by the National Institutes of Health. In addition to its existing rights, the United States of America may have additional rights to this invention under the above grant.
TECHNICAL FIELD OF THE INVENTION The present invention relates to multidrug-resistant retroviral protease inhibitors, compositions, uses thereof, and related methods.
BACKGROUND OF THE INVENTION Acquired immune deficiency syndrome (AIDS) is a fatal disease, reported cases of which have increased dramatically within the past several years. Estimates of reported cases in the very near future also continue to rise dramatically.
The AIDS virus was first identified in 1983. It has been known by several names and acronyms. It is the third known T-lymphocyte virus (HTLV-III) , and it has the capacity to replicate within cells of the immune system, causing profound cell destruction. The AIDS virus is a retrovirus, a virus that uses reverse transcriptase during replication. This particular retrovirus is also known as lymphadenopathy-associated virus (LAV) , AIDS-related virus (ARV) and, most recently, as human immunodeficiency virus (HIV) . Two distinct families of HIV have been described to date, namely HIV-1 and HIV-2. The acronym HIV will be used herein to refer to HIV viruses generically.
Specifically, HIV is known to exert a profound cytopathic effect on the CD4+ helper/inducer T-cells, thereby severely compromising the immune system. HIV infection also results in neurological deterioration and, ultimately, in the death of the infected individual .
The field of viral chemotherapeutics has developed in response to the need for agents effective against retroviruses, in particular HIV. For example anti- retroviral agents, such as 3 ' -azido-2 ' , 3 ' -dideoxythymidine (AZT) , 2 ' 3 ' -dideoxycytidine (ddC) , and 2 ' 3 ' -dideoxyinosine (ddl) are known to inhibit reverse transcriptase. There also exist antiviral agents that inhibit transactivator protein. Nucleoside analogs, such as AZT, are currently available for antiviral therapy. Although very useful, the utility of AZT and related compounds is limited by toxicity and insufficient therapeutic indices for fully adequate therapy . Retroviral protease inhibitors also have been identified as a class of anti-retroviral agents. Retroviral protease processes polyprotein precursors into viral structural proteins and replicative enzymes. This processing is essential for the assembly and maturation of fully infectious virions. Accordingly, the design of protease inhibitors remains an important therapeutic goal in the treatment of AIDS .
The use of HIV protease inhibitors, in combination with agents that have different antiretroviral mechanisms (e.g., AZT, ddl and ddT) , also has been described. For example, synergism against HIV-1 has been observed between certain C2 symmetric HIV inhibitors and AZT (Kageyama et al., Antimicrob. Agents Chemother. , 36, 926-933 (1992)).
Numerous classes of potent peptidic inhibitors of protease have been designed using the natural cleavage site of the precursor polyproteins as a starting point. These inhibitors typically are peptide substrate analogs in which the scissile Pi-Pi' amide bond has been replaced by a non- hydrolyzable isostere with tetrahedral geometry (Moore et al, Perspect. Drug Dis . Design, 1, 85 (1993) ; Tomasselli et al., Int . J. Chem . Biotechnology, 6 (1991); Huff, J. Med. Chem. , 34, 2305 (1991); Norbeck et al . , Ann . Reports Med. Chem. , 26, 141 (1991); and Meek, J". Enzyme Inhibi tion, 6, 65 (1992)) . Although these inhibitors are effective in preventing the retroviral protease from functioning, the inhibitors suffer from some distinct disadvantages.
Generally, peptidomimetics often make poor drugs, due to their potential adverse pharmacological properties, i.e., poor oral absorption, poor stability and rapid metabolism (Plattner et al, Drug Discovery Technologies, Clark et al . , eds., Ellish Horwood, Chichester, England (1990)).
The design of the HIV-1 protease inhibitors based on the transition state mimetic concept has led to the generation of a variety of peptide analogs highly active against viral replication in vi tro (Erickson et al, Science, 249, 527-533 (1990); Kramer et al . , Science, 231, 1580-1584 (1986); McQuade et al . , Science, 247, 454-456 (1990); Meek et al . , Nature (London) , 343, 90-92 (1990); and Roberts et al . , Science, 248, 358-361 (1990)). These active agents contain a non-hydrolyzable, dipeptidic isostere, such as hydroxyethylene (McQuade et al . , supra; Meek, et al . , Nature (London) , 343, 90-92 (1990); and Vacca et al., J. Med. Chem. , 34, 1225-1228 (1991)) or hydroxyethylamine (Ghosh et al . , Bioorg . Med. Chem . Lett . , 8, 687-690 (1998); Ghosh et al . , J. Med. Chem. , 36, 292-295 (1993)); Rich et al . , J. Med. Chem . , 33, 1285-1288 (1990); and Roberts et al . , Science, 248, 358-361 (1990)) as an active moiety that mimics the putative transition state of the aspartic protease-catalyzed reaction.
Two-fold (C2) symmetric inhibitors of HIV protease represent another class of potent HIV protease inhibitors, which were created by Erickson et al . , on the basis of the three-dimensional symmetry of the enzyme active site
(Erickson et al . (1990), supra) . Typically, however, the usefulness of currently available HIV protease inhibitors in the treatment of AIDS has been limited by relatively short plasma half-life, poor oral bioavailability, and the technical difficulty of scale-up synthesis (Meek et al . (1992) , supra) .
In a continuing effort to address the problem of short plasma half-life and poor bioavailability, new HIV protease inhibitors have been identified. For example, HIV protease inhibitors incorporating the 2 , 5-diamino-3 , 4-disubstituted- 1, 6-diphenylhexane isostere are described in Ghosh et al . , Bioorg. Med. Chem . Lett . , 8, 687-690 (1998) and U.S. Patent Nos. 5,728,718 (Randad et al . ) . HIV protease inhibitors, which incorporate the hydroxyethylamine isostere, are described in U.S. Patent Nos. 5,502,060 (Thompson et al . ) , 5,703,076 (Talley et al . ) , and 5,475,027 (Talley et al . ) . Recent studies, however, have revealed the emergence of mutant strains of HIV, in which the protease is resistant to the C2 symmetric inhibitors (Otto et al . , PNAS USA, 90, 7543 (1993); Ho et al . , J". Virology, 68, 2016-2020 (1994); and Kaplan et al . , PNAS USA, 91, 5597-5601 (1994)). In one study, the most abundant mutation found in response to a C2 symmetry based inhibitor was Arg to Gin at position 8 (R8Q) , which strongly affects the S3/S3, subsite of the protease binding domain. In this study, the shortening of the P3/P3. residues resulted in inhibitors that were equipotent towards both wild-type and R8Q mutant proteases (Majer et al . , 13th American Peptide Symposium, Edmonton, Canada (1993)). Inhibitors have been truncated to P2/P2, without significant loss of activity (Lyle et al . , J". Med. Chem. , 34, 1230 (1991); and Bone et al . , J. Am . Chem. Soc . , 113, 9382 (1991)). These results suggest that inhibitors can be truncated and yet maintain the crucial interactions necessary for strong binding. The benefits of such an approach include the elimination of two or more peptide bonds, the reduction of molecular weight, and the diminishment of the potential for recognition by degradative enzymes.
More recently, new mutant strains of HIV have emerged that are resistant to multiple, structurally diverse, experimental and chemotherapeutic retroviral protease inhibitors. Such multidrug-resistant HIV strains are typically found in infected patients, who had undergone treatment with a combination of HIV protease inhibitors or a series of different HIV protease inhibitors . The number of reported cases of patients infected with multidrug- resistant HIV is rising dramatically. Tragically for these patients, the available options for AIDS chemotherapy and/or HIV management is severely limited or is, otherwise, completely nonexistent .
In view of the foregoing problems, there exists a need for inhibitors against multidrug-resistant HIV strains.
Further, there exists a need for nonpeptidic inhibitors of multidrug-resistant HIV protease. The present invention provides such inhibitors of multidrug-resistant HIV protease, compositions, synthesis methods, and uses thereof . These and other advantages of the present invention, as well as additional inventive features, will be apparent from the description of the invention provided herein.
BRIEF SUMMARY OF THE INVENTION The present invention generally provides a retroviral protease-inhibiting compound represented by the formula:
Figure imgf000008_0001
(I), or a pharmaceutically acceptable salt, a prodrug, or an ester thereof, wherein:
A is a group of the formula:
Figure imgf000008_0002
R1 is H or an alkyl, an alkenyl, an alkynyl, a cycloalkyl, a cycloalkylalkyl, an aryl, an aralkyl, a heterocycloalkyl, a heterocycloalkylalkyl, a heteroaryl, or a heteroaralkyl radical, in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of OR7, SR7, CN, N02, N3, and a halogen, wherein R7 is H, an alkyl, an alkenyl , or an alkynyl ; Y and Z are the same or different and are independently selected from the group consisting of CH2, 0, S, SO, S02, NR8, R8C(0)N, R8C(S)N, R80C(0)N, R80C(S)N, R8SC(0)N, R8R9NC(0)N, and R8R9NC(S)N, wherein R8 and R9 are independently selected from the group consisting of H, an alkyl , an alkenyl , and an alkynyl ; n is an integer from 1 to 5;
X is a covalent bond, CHR10, CHR10CH2, CH2CHR10, 0, NR10, or S, wherein R10 is H, an alkyl, an alkenyl, or an alkynyl; Q is C(0), C(S), or S02;
R2 is H, an alkyl, an alkenyl, or an alkynyl; m is an integer from 0 to 6;
R3 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of alkyl, (CH2)pRι:L, OR12, SR12, CN, N3, N02, NR12R13, C(0)R12, C(S)R12, C02R12, C(0)SR12, C(0)NR12R13, C(S)NR12R13, NR12C(0)R13, NR12C(S)R13, NR12C02R13, NR12C(0)SR13, and a halogen, wherein: p is an integer from 0 to 5;
R11 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OH, 0CH3, NH2, N02, SH, and CN; and
R12 and R13 are independently selected from the group consisting of H, an alkyl, an alkenyl, and an alkynyl ;
R4 is OH, =0 (keto) , NH2, of NHCH3, wherein, when R4 is OH, it is optionally in the form of a pharmaceutically acceptable ester or prodrug, and when R4 is NH2, it is optionally an amide, a hydroxylamino, a carbamate, a urea, an alkylamino, a dialkylamino, a protic salt, or a tetraalkylammonium salt;
R5 is H, a Ci-Cg alkyl radical, a C2-C6 alkenyl radical, or (CH2)qR14, wherein q is an integer form 0 to 5, and R14 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl radical in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OH, 0CH3, NH2, N02, SH, and CN; W is C(O), C(S), S(O), or S02; and
R6 is a cycloalkyl, heterocycloalkyl, aryl, or heteroaryl radical in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OR15, SR15, S(0)R15, S02R15, S02NR15R16, S02N(OH)R15, CN, CR15=NR16,
CR15=N(OR16) , N3, N02, NR15R16, N(OH)R15, C(0)R15, C(S)R15, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, C (0) N (OH) R15, C (S) N (OH) R15, NR15C(0)R16, NR15C(S)R16, N (OH) C (O) R15, N(0H) C (S) R15, NR15C02R, N(0H)C02R1S, NR15C(0)SR16, NR15C (0) NR16R17, and NR15C (S) NR16R17, N(OH)C(0)NR15R16, N(0H) C (S) NR15R16, NR15C (O) N (OH) R16, NR15C(S)N(OH)R16, NR15S02R16, NHS02NR15R16, NR15S02NHR16 , P(0) (OR15) (OR16), an alkyl, an alkoxy, an alkylthio, an alkylamino, a cycloalkyl, a cycloalkylalkyl, a heterocycloalkyl, a heterocycloalkylalkyl, an aryl, an aryloxy, an arylamino, an arylthio, an aralkyl, an aryloxyalkyl , an arylaminoalkyl , an aralkoxy, an (aryloxy) alkoxy, an (arylamino) alkoxy, an (arylthio) alkoxy, an aralkylamino, an (aryloxy) alkylamino, an (arylamino) alkylamino, an (arylthio) alkylamino, an aralkylthio, an (aryloxy) alkylthio, an
(arylamino) alkylthio, an (arylthio) alkylthio, a heteroaryl, a heteroaryloxy, a heteroarylamino, a heteroarylthio, a heteroaralkyl, a heteroaralkoxy, a heteroaralkylamino, and a heteroaralkylthio, wherein R1S, R16, and R17 are H, an unsubstituted alkyl, and an unsubstituted alkenyl, wherein, when at least one hydrogen atom of Rβ is optionally substituted with a substituent other than a halogen, OR15, SR1S, S(0)R15, S02R15, S02NR15R16, S02N(OH)R15, CN, CR15=NR16, CR15=N(OR16) , N3, N02, NR15R16, N(OH)R15, C(0)R15, C(S)R15, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, C (0) N (OH) R15, C(S)N(0H)R15, NR15C(0)R16, NR15C(S)R16, N (OH) C (0) R15, N(0H)C(S)R15, NR15C02R16, N(0H)C02R15, NR15C (0) SR1S, NR15C(0)NR16R17, NR15C(S)NR16R17, N (OH) C (0) NR15R16, N(OH)C(S)NR15R16, NR15C(0)N(OH)R16, NR15C (S) N (OH) R16, NR15S02R16, NHS02NR15R16 , NR1SS02NHR16 , or P (0) (OR15) (OR16) , then at least one hydrogen atom on said substituent is optionally substituted with a halogen, OR15, SR1S, S(0)R15, S02R15, S02NR15R16, S02N(0H)R15, CN, CR15=NR16, CR15=N (OR16) , N3, N02, NR15R16, N(0H)R15, C(0)R15, C(S)R15, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, C(0)N(0H)R1S, C (S) N (OH) R15, NR15C(0)R16, NR15C(S)R1S, N(0H)C(0)R15, N (OH) C (S) R15, NR15C02R16, N(OH)C02R15, NR15C(0)SR16, NR15C(0)NR16R17, NR15C (S) NR16R17, N (OH) C (0) NR15R16, N(OH)C(S)NR15R16, NR15C(0)N(OH)R16, NR15C (S) N (OH) R16, NR15S02R16, NHS02NR15R16 , NR15S02NHR16, or P (0) (OR15) (OR16) ; wherein the compound inhibits a retroviral protease, more particularly a multidrug-resistant retroviral protease, more particularly a multidrug-resistant HIV protease. Optionally, R5 and R6 are covalently joined together, such that R5 and Rfi together comprise a 12 to 18 membered ring, with or without a heteroatom (e.g., N, 0, or S) within the ring, which ring includes the N-W bond of Formula (I) . Also provided is a pharmaceutical composition comprising a multidrug-resistant retroviral protease- inhibiting amount of a compound of the present invention (or a pharmaceutically acceptable salt, a prodrug, or an ester thereof) and a pharmaceutically acceptable carrier. The present invention further provides a method of inhibiting the protease of a multidrug-resistant retrovirus in a mammal infected with a protease-producing, multidrug- resistant retrovirus. The method comprises administering a multidrug-resistant, retroviral protease-inhibiting effective amount of a compound of the present invention, so as to inhibit proliferation of the retrovirus in the mammal .
BRIEF DESCRIPTION OF THE DRAWINGS
Fig. 1 illustrates the synthesis of a particular sulfonamide isostere core of a compound of the present invention.
Figure 2 illustrates the synthesis of a bis- tetrahydrofuran ligand and the optical resolution thereof.
Fig. 3A illustrates the synthesis of a multidrug- resistant retroviral protease inhibitor of the present invention via coupling of a bis-tetrahydrofuran ligand to a sulfonamide isostere of the present invention.
Fig. 3B illustrates the synthesis of a multidrug- resistant retroviral protease inhibitor of the present invention via coupling of a bis-tetrahydrofuran ligand to a sulfonamide isostere of the present invention. Figure 4 illustrates generally the present method of synthesizing a multidrug-resistant inhibitor of the present invention.
Figures 5A-5D illustrate the structures of particular compounds that were tested against various drug-resistant HIV mutants .
DESCRIPTION OF THE PREFERRED EMBODIMENTS The present invention provides a retroviral protease- inhibiting compound represented by the formula:
Figure imgf000013_0001
(I), or a pharmaceutically acceptable salt, a prodrug, or an ester thereof, wherein:
A is a group of the formula:
Figure imgf000013_0002
R1 is H or an alkyl, an alkenyl, an alkynyl, a cycloalkyl, a cycloalkylalkyl, an aryl, an aralkyl, a heterocycloalkyl, a heterocycloalkylalkyl, a heteroaryl, or a heteroaralkyl radical, in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of OR7, SR7, CN, N02, N3, and a halogen, wherein R7 is H, an alkyl, an alkenyl , or an alkynyl ;
Y and Z are the same or different and are independently selected from the group consisting of CH2, 0, S, SO, S02, NR8, R8C(0)N, R8C(S)N, R8OC(0)N, R8OC(S)N,
R8SC(0)N, R8R9NC(0)N, and R8R9NC(S)N, wherein R8 and R9 are independently selected from the group consisting of H, an alkyl, an alkenyl, and an alkynyl; n is an integer from 1 to 5; X is a covalent bond, CHR10, CHR10CH2, CH2CHR10, 0, NR10, or S, wherein R10 is H, an alkyl, an alkenyl, or an alkynyl; Q is C(0) , C(S) , or S02;
R2 is H, an alkyl, an alkenyl, or an alkynyl; m is an integer from 0 to 6; R3 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of H, alkyl, (CH2)pR 11 OR12, SR12, CN, N3, N02, NR12R13, C(0)R12, C(S)R12, C02R12, C(0)SR12, C(0)NR12R13, C(S)NR1R13, NR1C(0)R13, NR12C(S)R13, NR12C02R13, NR12C(0)SR13, and a halogen, wherein: p is an integer from 0 to 5 ;
R11 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OH, 0CH3, NH2, N02, SH, and CN; and
R12 and R13 are independently selected from the group consisting of H, an alkyl, an alkenyl, and an alkynyl;
R4 is OH, =0 (keto) , or NH2, wherein, when R4 is OH, it is optionally in the form of a pharmaceutically acceptable ester or prodrug, and when R4 is NH2, it is optionally an amide, a hydroxylamino, a carbamate, a urea, an alkylamino, a dialkylamino, a protic salt, or a tetraalkylammonium salt; R5 is H, a Ci-C6 alkyl radical, a C2-C6 alkenyl radical, or (CH2)qR14, wherein q is an integer form 0 to 5, and R14 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl radical in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OH, OCH3, NH2, N02, SH, and CN;
W is C(O), C(S), S(0), or S02; and R6 is a cycloalkyl, heterocycloalkyl, aryl, or heteroaryl radical in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OR15, SR15, S(0)R15, S02R15, S02NR15R16, S02N(OH)R15, CN, CR15=NR16, CR1S=N(0R16) , N3, N02, NR15R16, N(OH)R15, C(0)R15, C(S)R1S, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, C (0) N (OH) R15, C (S) N (OH) R15, NR15C(0)R16, NR1SC(S)R16, N (OH) C (O) R15, N (OH) C (S) R15, NR15C02R16, N(0H)C02R15, NR15C(0)SR16, NR15C (0) NR16R17, and NR15C (S) NR16R17, N(OH)C(0)NR15R16, N(OH)C(S)NR15R16, NR15C (0) N (OH) R16, NR15C(S)N(OH)R16, NR15S02R16, NHS02NR15R16 , NR1SS02NHR16 , P(0) (OR15) (OR16), an alkyl, an alkoxy, an alkylthio, an alkylamino, a cycloalkyl, a cycloalkylalkyl, a heterocycloalkyl, a heterocycloalkylalkyl, an aryl, an aryloxy, an arylamino, an arylthio, an aralkyl, an aryloxyalkyl , an arylaminoalkyl, an aralkoxy, an (aryloxy) alkoxy, an (arylamino) alkoxy, an (arylthio) alkoxy, an aralkylamino, an (aryloxy) alkylamino, an
(arylamino) alkylamino, an (arylthio) alkylamino, an aralkylthio, an (aryloxy) alkylthio, an (arylamino) alkylthio, an (arylthio) alkylthio, a heteroaryl, a heteroaryloxy, a heteroarylamino, a heteroarylthio, a heteroaralkyl, a heteroaralkoxy, a heteroaralkylamino, and a heteroaralkylthio, wherein R15, R16, and R17 are H, an unsubstituted alkyl, and an unsubstituted alkenyl, wherein, when at least one hydrogen atom of R6 is optionally substituted with a substituent other than a halogen, OR15, SR15, S(0)R15, S02R15, S02NR15R16, S02N(OH)R15, CN, CR15=NR16, CR15=N(OR16) , N3, N02, NR15R16, N(OH)R15, C(0)R15,
C(S)R15, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, C (O) N (OH) R15, C(S)N(OH)R15, NR1SC(0)R16, NR15C(S)R16, N (OH) C (O) R15, N(0H)C(S)R15, NR15C02R16, N(OH)C02R15, NR15C (O) SR16, NR15C(0)NR16R17, NR15C(S)NR16R17, N (OH) C (O) NR15R16, N(OH)C(S)NR15R16, NR15C (O) N (OH) R16, NR15C (S) N (OH) R16, NR15S02R16, NHS02NR15R16 , NR15S02NHR16, or P (O) (OR15) (OR16) , then at least one hydrogen atom on said substituent is optionally substituted with a halogen, OR15, SR15, S(0)R15, S02R15, S02NR15R16, S02N(OH)R15, CN, CR15=NR16, CR15=N (OR16) , N3, N02, NR15R16, N(0H)R15, C(0)R15, C(S)R15, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, C(0)N(OH)R15, C (S) N (OH) R15, NR15C(0)R16, NR15C(S)R16, N(OH)C(0)R15, N (OH) C (S) R15, NR15C02R16, N(OH)C02R15, NR15C(0)SR16, NR15C(0)NR16R17, NR15C (S) NR16R17, N (OH) C (0) NR15R1S, N(OH)C(S)NR15R, NR1 C(0)N(OH)R16, NR15C (S) N (OH) R16, NR15S02R16, NHS02NR15R16 , NR15S02NHR16, or P (0) (OR15) (OR16) ; wherein the compound of the present invention inhibits a retroviral protease, more particularly a multidrug- resistant retroviral protease, more particularly a multidrug-resistant HIV protease. Optionally, R5 and R6 are covalently joined together, such that R5 and R6 together comprise a 12 to 18 membered ring, with or without a heteroatom (e.g., N, 0, or S) within the ring, which ring includes the N-W bond of Formula (I) .
As utilized herein, the term "alkyl" means a straight- chain or branched-chain alkyl radical containing from about 1 to about 20 carbon atoms chain, preferably from about 1 to about 10 carbon atoms, more preferably from about 1 to about 8 carbon atoms, still more preferably from about 1 to about 6 carbon atoms . Examples of such substituents include methyl, ethyl, propyl, isopropyl, n-butyl, sec-butyl, isobutyl, tert-butyl, pentyl, isoamyl, hexyl, octyl, dodecanyl, and the like.
The term "alkenyl" means a straight-chain or branched- chain alkenyl radical having one or more double bonds and containing from about 2 to about 20 carbon atoms chain, preferably from about 2 to about 10 carbon atoms, more preferably from about 2 to about 8 carbon atoms, still more preferably from about 2 to about 6 carbon atoms. Examples of such substituents include vinyl, allyl, 1,4-butadienyl, isopropenyl, and the like. The term "alkynyl" means a straight-chain or branched- chain alkynyl radical having one or more triple bonds and containing from about 2 to about 20 carbon atoms chain, preferably from about 2 to about 10 carbon atoms, more preferably from about 2 to about 8 carbon atoms, still more preferably from about 2 to about 6 carbon atoms. Examples of such radicals include ethynyl, propynyl (propargyl) , butynyl, and the like.
The term "alkoxy" means an alkyl ether radical, wherein the term "alkyl" is defined as above. Examples of alkoxy radicals include methoxy, ethoxy, t-propoxy, isopropoxy, n- butoxy, isobutoxy, sec-butoxy, tert-butoxy, hexanoxy, and the like. The term "alkylthio" means an alkyl thioether radical, wherein the term "alkyl" is defined as above. Examples of alkylthio radicals include methylthio (SCH3) , ethylthio (SCH2CH3) , n-propylthio, isopropylthio, n-butylthio, isobutylthio, sec-butylthio, tert-butylthio, n-hexylthio, and the like.
The term "alkylamino" means an alkyl amine radical, wherein the term "alkyl" 'is defined as above. Examples of alkylamino radicals include methylamino (NHCH3) , ethylamino (NHCH2CH3) , n-propylamino, isopropylamino, n-butylamino, isobutylamino, sec-butylamino, tert-butylamino, n- hexylamino, and the like.
The term "cycloalkyl" means a monocyclic or a polycyclic alkyl radical defined by one or more alkyl carbocyclic rings, which can be the same or different when the cycloalkyl is a polycyclic radical having 3 to about 10 carbon atoms in the carbocyclic skeleton in each ring, preferably about 4 to about 7 carbon atoms, more preferably 5 to 6 carbons atoms. Examples of monocyclic cycloalkyl radicals include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, cyclodecyl, and the like. Examples of polycyclic cycloalkyl radicals include decahydronaphthyl , bicyclo [5.4.0] undecyl, adamantyl, and the like.
The term "cycloalkylalkyl" means an alkyl radical as defined herein, in which at least one hydrogen atom on the alkyl radical is replaced by a cycloalkyl radical as defined herein. Examples of cycloalkylalkyl radicals include cyclohexylmethyl, 3-cyclopentylbutyl, and the like.
The term "heterocycloalkyl" means a cycloalkyl radical as defined herein (including polycyclics) , wherein at least one carbon which defines the carbocyclic skeleton is substituted with a heteroatom such as, for example, 0, N, or S, optionally comprising one or more double bond within the ring, provided the ring is not heteroaryl as defined herein. The heterocycloalkyl preferably has 3 to about 10 atoms (members) in the carbocyclic skeleton of each ring, preferably about 4 to about 7 atoms, more preferably 5 to 6 atoms. Examples of heterocycloalkyl radicals include epoxy, aziridyl, oxetanyl, tetrahydrofuranyl, dihydrofuranyl, piperadyl, piperidinyl, pyperazyl, piperazinyl, pyranyl, morpholinyl, and the like. The term "heterocycloalkylalkyl" means an alkyl radical as defined herein, in which at least one hydrogen atom on the alkyl radical is replace by a heterocycloalkyl radical as defined herein. Examples of heterocycloalkylalkyl radicals include 2-morpholinomethyl, 3- (4-morpholino) - propyl, 4- (2 -tetrahydrofuranyl) -butyl, and the like.
The term "aryl" refers to an aromatic carbocyclic radical, as commonly understood in the art, and includes monocyclic and polycyclic aromatics such as, for example, phenyl and naphthyl radicals, optionally substituted with one or more substituents selected from the group consisting of a halogen, an alkyl, alkoxy, amino, cyano, nitro, and the like.
The term "aryloxy" means aryl as defined herein, wherein a hydrogen atom is replaced by an oxygen. Examples of aryloxy radicals include phenoxy, naphthoxy, 4- flourophenoxy, and the like.
The term "arylamino" means aryl as defined herein, wherein a hydrogen atom is replaced by an amine . Examples of arylamino radicals include phenylamino, naphthylamino, 3- nitrophenylamino, 4-aminophenylamino, and the like.
The term "arylthio" means aryl as defined herein, wherein a hydrogen atom is replaced by a sulfur atom. Examples of arylthio radicals include phenylthio, naphthylthio, 3-nitrophenylthio, 4-thiophenylthio, and the like.
The term "aralkyl" means alkyl as defined herein, wherein an alkyl hydrogen atom is replaced by an aryl as defined herein. Examples of aralkyl radicals include benzyl, phenethyl, 3- (2-naphthyl) -butyl, and the like.
The term "aryloxyalkyl" means alkyl as defined herein, wherein an alkyl hydrogen atom is replaced by an aryloxy as defined herein. Examples of aryloxyalkyl radicals include phenoxyethyl , 4- (3-aminophenoxy) -1-butyl, and the like.
The term "arylaminoalkyl" means alkyl as defined herein, wherein an alkyl hydrogen atom is replaced by an arylamino as defined herein. Examples of arylaminoalkyl radicals include phenylaminoethyl, 4- (3-methoxyphenylamino) - 1-butyl, and the like.
The term "aralkoxy" means alkoxy as defined herein, wherein an alkyl hydrogen atom is replaced by an aryl as defined herein. Examples of aralkoxy radicals include 2- phenylethoxy, 2-phenyl-l-propoxy, and the like.
The term " (aryloxy) alkoxy" means alkoxy as defined herein, wherein an alkyl hydrogen atom is replaced by an aryloxy as defined herein. Examples of (aryloxy) alkoxy radicals include 2-phenoxyethoxy, 4- (3-aminophenoxy) -1- butoxy, and the like.
The term " (arylamino) alkoxy" means alkoxy as defined herein, wherein an alkyl hydrogen atom is replaced by an arylamino as defined herein. Examples of (arylamino) alkoxy radicals include 2- (phenylamino) -ethoxy, 2- (2- naphthylamino) -1-butoxy, and the like.
The term " (arylthio) alkoxy" means alkoxy as defined herein, wherein an alkyl hydrogen atom is replaced by an arylthio as defined herein. Examples of (arylthio) alkoxy radicals include 2- (phenylthio) -ethoxy, and the like.
The term "aralkylamino" means alkylamino as defined herein, wherein an alkyl hydrogen atom is replaced by an aryl as defined herein. Examples of aralkylamino radicals include 2-phenethylamino, 4-phenyl-n-butylamino, and the like.
The term " (aryloxy) alkylamino" means alkylamino as defined herein, wherein an alkyl hydrogen atom is replaced by an aryloxy as defined herein. Examples of
(aryloxy) alkylamino radicals include 3-phenoxy-n- propylamino, 4-phenoxybutylamino, and the like.
The term " (arylamino) alkylamino" means alkylamino as defined herein, wherein an alkyl hydrogen atom is replaced by an arylamino as defined herein. Examples of
(arylamino) alkylamino radicals include 3- (naphthylamino) -1- propylamino, 4- (phenylamino) -1-butylamino, and the like.
The term " (arylthio) alkylamino" means alkylamino as defined herein, wherein an alkyl hydrogen atom is replaced by an arylthio as defined herein. Examples of
(arylthio) alkylamino radicals include 2- (phenylthio) - ethylamino, and the like.
The term "aralkylthio" means alkylthio as defined herein, wherein an alkyl hydrogen atom is replaced by an aryl as defined herein. Examples of aralkylthio radicals include 3-phenyl-2-propylthio, 2- (2-naphthyl) -ethylthio, and the like.
The term " (aryloxy) alkylthio" means alkylthio as defined herein, wherein an alkyl hydrogen atom is replaced by an aryloxy as defined herein. Examples of
(aryloxy) alkylthio radicals include 3-phenoxypropylthio, 4- (2-fluorophenoxy) - butylthio, and the like. The term " (arylamino) alkylthio" means alkylthio as defined herein, wherein an alkyl hydrogen atom is replaced by an arylamino as defined herein. Examples of (arylamino) alkylthio radicals include 2- (phenylamino) - ethylthio, 3- (2-naphthylamino) -n-propylthio, and the like. The term " (arylthio) alkylthio" means alkylthio as defined herein, wherein an alkyl hydrogen atom is replaced by an arylthio as defined herein. Examples of (arylthio) alkylthio radicals include 2- (naphthylthio) - ethylthio, 3- (phenylthio) -propylthio, and the like.
The term "heteroaryl" means a radical defined by an aromatic heterocyclic ring as commonly understood in the art, including monocyclic radicals such as, for example, imidazole, thiazole, pyrazole, pyrrole, furane, pyrazoline, thiophene, oxazole, isoxazol, pyridine, pyridone, pyrimidine, pyrazine, and triazine radicals, and also including polycyclics such as, for example, quinoline, isoquinoline, indole, and benzothiazole radicals, which heteroaryl radicals are optionally substituted with one or more substituents selected from the group consisting of a halogen, an alkyl, alkoxy, amino, cyano, nitro, and the like. It will be appreciated that the heterocycloalkyl and heteroaryl substituents can be coupled to the compounds of the present invention via a heteroatom, such as nitrogen (e.g., 1-imidazolyl) .
The term "heteroaryloxy" means heteroaryl as defined herein, wherein a hydrogen atom on the heteroaryl ring is replaced by an oxygen. Heteroaryloxy radicals include, for example, 4-pyridyloxy, 5-quinolyloxy, and the like. The term "heteroarylamino" means heteroaryl as defined herein, wherein a hydrogen atom on the heteroaryl ring is replaced by an nitrogen. Heteroarylamino radicals include, for example, 4-thiazolylamino, 2-pyridylamino, and the like.
The term "heteroarylthio" means heteroaryl as defined herein, wherein a hydrogen atom on the heteroaryl ring is replaced by a sulfur. Heteroarylthio radicals include, for example, 3-pyridylthio, 3-quinolylthio, 4-imidazolylthio, and the like.
The term "heteroaralkyl" means alkyl as defined herein, wherein an alkyl hydrogen atom is replaced by a heteroaryl as defined herein. Examples of heteroaralkyl radicals include 2-pyridylmethyl, 3- (4-thiazolyl) -propyl , and the like.
The term "heteroaralkoxy" means alkoxy as defined herein, wherein an alkyl hydrogen atom is replaced by a heteroaryl as defined herein. Examples of heteroaralkoxy radicals include 2-pyridylmethoxy, 4- (1-imidazolyl) -butoxy, and the like.
The term "heteroaralkylamino" means alkylamino as defined herein, wherein an alkyl hydrogen atom is replaced by a heteroaryl as defined herein. Examples of heteroaralkylamino radicals include 4-pyridylmethylamino, 3- (2-furanyl) -propylamino, and the like.
The term "heteroaralkylthio" means alkylthio as defined herein, wherein an alkyl hydrogen atom is replaced by a heteroaryl as defined herein. Examples of heteroaralkylthio radicals include 3-pyridylmethylthio, 3- (4-thiazolyl) -propylthio, and the like.
In the compounds of the present invention, it is preferred that R1 is H or an alkyl, an alkenyl, a cycloalkyl, a cycloalkylalkyl, an aryl, an aralkyl, a heterocycloalkyl, a heterocycloalkylalkyl, a heteroaryl, or a heteroaralkyl radical, in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of OR7, SR7, CN, N02, N3, and a halogen, wherein R7 is H, an unsubstituted alkyl, or an unsubstituted alkenyl; Y and Z are the same or different and are independently selected from the group consisting of CH2, 0, S, SO, S02, NR8, R8C(0)N, R8C(S)N, R8OC(0)N, R8OC(S)N, R8SC(0)N, R8R9NC(0)N, and R8R9NC(S)N, wherein R8 and R9 are independently selected from the group consisting of H, an unsubstituted alkyl, and an unsubstituted alkenyl; X is a covalent bond, CHR10, CHR10CH2, CH2CHR10, 0, NR10, or S, wherein R10 is H, an unsubstituted alkyl, or an unsubstituted alkenyl; R2 is H, a Ci-C6 alkyl radical, or a C2-C6 alkenyl radical; R12 and R13, as defined with respect to R3, are independently selected from the group consisting of H, an unsubstituted alkyl, and an unsubstituted alkenyl radical; R4 is OH, NH2, or NHCH3; W is C(0), C(S), or S02; and R6 is a cycloalkyl, heterocycloalkyl, aryl, or heteroaryl radical in which at least one hydrogen atom is optionally substituted with a substituent independently selected from the group consisting of a halogen, OR15, SR15, CN, N3, N02, NR15R16, C(0)R15, C(S)R15, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, NR15C(0)R16, NR15C(S)R1S, NR15C02R16, NR15C (0) SR16, NR15C (0) NR16R17, and NR15C(S)NR16R17, an alkyl, an alkoxy, an alkylthio, an alkylamino, a cycloalkyl, a cycloalkylalkyl, a heterocycloalkyl, a heterocycloalkylalkyl, an aryl, an aryloxy, an arylamino, an arylthio, an aralkyl, an aryloxyalkyl, an arylaminoalkyl, an aralkoxy, an (aryloxy) alkoxy, an (arylamino) alkoxy, an (arylthio) alkoxy, an aralkylamino, an (aryloxy) alkylamino, an
(arylamino) alkylamino, an (arylthio) alkylamino, an aralkylthio, an (aryloxy) alkylthio, an (arylamino) alkylthio, an (arylthio) alkylthio, a heteroaryl, a heteroaryloxy, a heteroarylamino, a heteroarylthio, a heteroaralkyl, a heteroaralkoxy, a heteroaralkylamino, and a heteroaralkylthio, wherein R15, R16, and R17 are H, an unsubstituted alkyl, and an unsubstituted alkenyl, such that when at least one hydrogen atom of R6 is optionally substituted with a substituent other than a halogen, OR15, SR15, CN, N3, N02, NR15R16, C(0)R15, C(S)R15, C02R1S, C(0)SR15, C(0)NR15R16, C(S)NR15R16, NR15C(0)R16, NR15C(S)R16, NR15C02R16, NR15C(0)SR16, NR15C(0)NR16R17, or NR15C (S)NR16R17, at least one hydrogen atom on said substituent attached to R6 is optionally substituted with a halogen, OR15, SR15, CN, N3, N02, NR15R16, C(0)R15, C(S)R15, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, NR15C(0)R15, NR15C(S)R16, NR15C02R16, NR15C (0) SR16, NR15C(0)NR16R17, or NR15C (S) NR16R17.
It is further preferred that when R1 is an alkyl or an alkenyl radical (i.e., an alkyl or an alkenyl substituent), then it is a Ci-C6 alkyl or, in the case when R1 is an alkenyl, it is a C2-C6 alkenyl. When R1 is a monocyclic substituent such as, for example, a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl, it preferably comprises 4-7 members in the ring that defines the monocyclic skeleton. When R7, R8 or R9 is an unsubstituted alkyl, it is preferably a Cj-Cg unsubstituted alkyl; and when R7, R8 or R9 is an unsubstituted alkenyl, it is preferably a C2-C6 unsubstituted alkenyl. The ring defined by R3 preferably comprises 4-7 members or, in the case of polycyclics, each ring comprises 4-7 members. When R3 is (CH^pR11, the ring defined by R11 preferably comprises 4-7 members, or, in the case of polycyclics, each ring comprises 4-7 members. When either of R12 or R13 is an unsubstituted alkyl, it is preferably a Ci-C6 unsubstituted alkyl, and when either of R12 or R13 is an unsubstituted alkenyl, it is a C2-C6 unsubstituted alkyl. When R14 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl, the ring defined by R14 preferably comprises 4-7 members, or, in the case of polycyclics, each ring comprises 4-7 members. When R6 is a cycloalkyl, a heterocycloalkyl, aryl, or a heteroaryl, the ring defined by R6 preferably comprises 4-7 members, or, in the case of polycyclics, each ring comprises 4-7 members, and when R6 is substituted with a substituent that is an alkyl, an alkylthio, or an alkylamino, it is preferred that the substituent comprises from one to six carbon atoms, and when R6 is substituted with a substituent that is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl, the ring defined by the substituent preferably comprises 4-7 members or, in the case of polycyclics, each ring comprises 4-7 members .
In a preferred embodiment, the compound of the present invention is represented by Formula (I), wherein Q is C(0), R2 is H, and W is C(0) or S02. In a further preferred embodiment, Q is C(O), R2 is H, R4 is OH, W is S02, and the stereochemical orientation of the asymmetric centers is represented by formula (IA) or (IB) below:
Figure imgf000026_0001
(IA) or
Figure imgf000027_0001
It is further preferred that R6 is a monocyclic substituent, preferably an aromatic ring, which is preferably a substituted benzene ring, as illustrated by the formula:
Figure imgf000027_0002
(IC) or
Figure imgf000027_0003
(ID), wherein, Ar is a phenyl which is optionally substituted with a substituent selected from the group consisting of methyl, amino, hydroxy, methoxy, methylthio, hydroxymethyl, aminomethyl , and methoxymethyl .
In a preferred series, Y and Z are oxygen atoms, n is 2, the resulting bis-tetrahydrofuranyl ring system has the stereochemical orientation illustrated in Formula (ID) above, m is 1, and R3 is phenyl, in which case the compound is represented by the formula:
Figure imgf000028_0001
(IE) . It is further preferred that X is an oxygen, R5 is isobutyl, and that Ar is a phenyl which is optionally substituted with a substituent selected from the group consisting of methyl, amino, hydroxy, methoxy, methylthio, hydroxymethyl , aminomethyl , and methoxymethyl .
In another preferred series, Y and Z are oxygen atoms, n is 2, the resulting bis-tetrahydrofuranyl ring system has the stereochemical orientation illustrated in Formula (1C) above, m is 1, and R3 is phenyl, in which case the compound is represented by the formula:
Figure imgf000028_0002
(IF), wherein, Ar is a phenyl which is optionally substituted with a substituent selected from the group consisting of methyl, amino, hydroxy, methoxy, methylthio, hydroxymethyl, aminomethyl , and methoxymethyl . When the compound of the present invention is a compound of Formula (IE) or (IF) , wherein Ar is a phenyl that is optionally substituted with a substituent selected from the group consisting of methyl, amino, hydroxy, methoxy, methylthio, hydroxymethyl, aminomethyl, and methoxymethyl, it is further preferred that X is an oxygen. Still more preferably, X is oxygen and R5 is isobutyl. The Ar substituent includes phenyl substituents that are substituted at the para position, the ortho position, and/or the meta position. Examples of compounds substituted with suitable Ar substituents are shown in Table 4, and in Figures 3 and 5A-5D. In accordance with the present invention, there is provided a pharmaceutical composition comprising a pharmaceutically acceptable carrier and a retroviral protease-inhibiting, particularly a multidrug-resistant retroviral protease-inhibiting, effective amount of at least one compound of the present invention, alone or in combination with another antiretroviral compound such as, for example, a wild-type HIV protease inhibitor, a mutant HIV retroviral protease inhibitor, or a reverse transcriptase inhibitor. Generally, the pharmaceutical composition of the present invention comprises a multidrug- resistant retroviral protease-inhibiting effective amount of at least one compound of Formula (I) , as disclosed herein, and a pharmaceutically acceptable carrier. In a preferred embodiment, the pharmaceutical composition of the present invention comprises a multidrug-resistant retroviral protease-inhibiting effective amount of at least one compound of Formula (IA) or Formula (IB) , or a pharmaceutically acceptable salt, prodrug, or ester thereof, and a pharmaceutically acceptable carrier. In a further preferred embodiment, the present pharmaceutical composition comprises a multidrug-resistant retroviral protease-inhibiting effective amount of at least one compound of Formula (IC) or Formula (ID) , or a pharmaceutically acceptable salt, prodrug, or ester thereof, and a pharmaceutically acceptable carrier. In a highly preferred embodiment, the present pharmaceutical composition comprises a multidrug-resistant retroviral protease-inhibiting effective amount of at least one compound of Formula (IE) , and pharmaceutically acceptable salts, prodrugs, and esters thereof, and a pharmaceutically acceptable carrier. Pharmaceutically acceptable carriers are well-known to those who are skilled in the art. The choice of a carrier will be determined in part by the particular composition, as well as by the particular mode of administration. Accordingly, there are a wide variety of suitable formulations of the pharmaceutical compositions of the present invention.
The pharmaceutical compositions of the present invention may be in a form suitable for oral use such as, for example, tablets, troches, lozenges, aqueous or oily suspensions or solutions, dispersible powders or granules, emulsions, hard or soft capsules, syrups or elixirs.
Compositions intended for oral use may be prepared according to any method known in the art form the manufacture of pharmaceutical compositions, and such compositions can contain one or more agents such as, for example, sweetening agents, flavoring agents, coloring agents, and preserving agents in order to provide a pharmaceutically elegant and/or palatable preparation. Tablets can contain the active ingredient in admixture with non-toxic pharmaceutically acceptable excipients which are suitable for manufacture of tablets. Such excipients can be, for example, inert diluents such as, for example, calcium carbonate, lactose, calcium phosphate or sodium phosphate; granulating and disintegrating agents such as, for example, maize starch or alginic acid; binding agents such as, for example, starch, gelatine or acacia, and lubricating agents such as, for example, stearic acid or talc. The tablets may be uncoated or they may be coated by known techniques to delay disintegration and absorption in the gastrointestinal tract and thereby provide a sustained action over a longer period. For example, a time delay material such as glyceryl monostearate or glyceryl distearate alone or with a wax may be employed.
Formulations for oral use also can be presented as hard gelatin capsules wherein the active ingredient is mixed with an inert solid diluent, for example calcium carbonate, calcium phosphate or kaolin, or as soft gelatin capsules wherein the active ingredient is mixed with water or an oil medium, for example arachis oil, peanut oil, liquid paraffin or olive oil.
Aqueous suspensions typically contain the active materials in admixture with excipients suitable for the manufacture of aqueous suspensions. Such excipients are suspending agents, for example, sodium carboxymethyl cellulose, methylcellulose, hydroxypropylmethylcellulose, sodium alginate, polyvinylpyrrolidone, gum tragacanth and gam acacia; dispersing or wetting agents may be a natural- occurring phosphatide, for example, lecithin, or condensation products of an alkylene oxide with fatty acids, for example polyoxyethylene stearate, or condensation products of ethylene oxide with long chain aliphatic alcohols, for example heptadecaethyleneoxycetanol , or condensation products of ethylene oxide with partial esters derived from fatty acids and a hexitol such as polyoxyethylene sorbitol monooleate, or condensation products of ethylene oxide with partial esters derived from fatty acids and hexitol anhydrides, for example polyoxyethylene sorbitan mono-oleate. The aqueous suspensions also can contain one or more preservatives, for example, ethyl or n-propyl p-hydroxy benzoate, one or more coloring agents, one or more flavoring agents and one or more sweetening agents such as, for example, sucrose or saccharin.
Oily suspensions may be formulated by suspending the active ingredient in a vegetable oil, for example arachis oil, olive oil, sesame oil or coconut oil, or in a mineral oil such as liquid paraffin. The oil suspensions may contain a thickening agent, for example beeswax, hard paraffin or cetyl alcohol. Sweetening agents, such as those set forth above, and flavoring agents may be added to provide a palatable oral preparation. These compositions can be preserved by the addition of an antioxidant such as, for example, ascorbic acid.
Dispersible powders and granules suitable for preparation of an aqueous suspension by the addition of water provide the active ingredient in admixture with a dispersing or wetting agent, suspending agent and one or more preservatives. Suitable dispersing or wetting agents and suspending agents are exemplified by those already mentioned above. Additional excipients, for example sweetening, flavoring and coloring agents, also may be present .
The pharmaceutical compositions of the present invention also can be in the form of oil-in-water emulsions. The oily phase can be a vegetable oil, for example, olive oil or arachis oils, or a mineral oil, for example liquid paraffin or mixtures of these. Suitable emulsifying agents may be naturally-occurring gums, for example gum acacia or gum tragacantn, naturally-occurring phosphatides, for example soya bean lecithin, and esters or partial esters derived from fatty acids and hexitol anhydrides, for example sorbitan mono-oleate, and condensation products of the said partial esters and ethylene oxide, for example polyoxyethylene sorbitan mono-oleate. The emulsions also can contain sweetening and flavoring agents.
The pharmaceutical compositions of the present invention also can be in the form of syrups and elixirs, which are typically formulated with sweetening agents such as, for example, glycerol, sorbitol or sucrose. Such formulations also can contain a demulcent, a preservative and flavoring and coloring agents. The pharmaceutical compositions can be in the form of a sterile injectable preparation, for example, as a sterile injectable aqueous or oleagenous suspension. Suitable suspensions for parenteral administration can be formulated according to the known art using those suitable dispersing or wetting agents and suspending agents which have been mentioned above. Formulations suitable for parenteral administration include, for example, aqueous and non- aqueous, isotonic sterile injection solutions, which can contain anti-oxidants, buffers, bacteriostates, and solutes that render the formulation isotonic with the blood of the intended recipient, and aqueous and non-aqueous sterile suspensions that can include suspending agents, solubilizers, thickening agents, stabilizers, and preservatives. The sterile injectable preparation can be a solution or a suspension in a non-toxic parenterally- acceptable diluent or solvent, for example, as a solution in water or 1, 3-butanediol . Among the acceptable vehicles and solvents that can be employed, for example, are water, Ringer's solution and isotonic sodium chloride solution. In addition, sterile, fixed oils are conventionally employed as a solvent or suspending medium. For this purpose any bland fixed oil can be employed including synthetic mono- or diglycerides . In addition, fatty acids such as, for example, oleic acid find use in the preparation of injectables.
The compounds of the present invention also can be administered in the form of suppositories for rectal administration of the drug. These compositions can be prepared by mixing the drug with a suitable non-irritating excipient which is solid at ordinary temperatures but liquid at the rectal temperature and will therefore melt in the rectum to release the drug. Such materials include, for example, cocoa butter and polyethylene glycols. Formulations suitable for vaginal administration can be presented as pessaries, tampons, creams, gels, pastes, and foams . Formulations suitable for topical administration may be presented as creams, gels, pastes, or foams, containing, in addition to the active ingredient, such carriers as are known in the art to be appropriate.
The multidrug-resistant retroviral protease inhibitors of the present invention, alone or in combination with other suitable components, can be made into aerosol formulations to be administered via inhalation. These aerosol formulations can be placed into pressurized acceptable propellants, such as dichlorodifluoromethane, propane, nitrogen, and the like. They also can be formulated as pharmaceuticals for non-pressured preparations such as in a nebulizer or an atomizer. The formulations can be presented in unit-dose or multi-dose sealed containers, such as ampules and vials, and can be stored in a freeze-dried (lyophilized) condition requiring only the addition of the sterile liquid excipient, for example, water, for injections, immediately prior to use. Extemporaneous injection solutions and suspensions can be prepared from sterile powders, granules, and tablets of the kind previously described.
Any suitable dosage level can be employed in the pharmaceutical compositions of the present invention. The dose administered to an animal, particularly a human, in the context of the present invention should be sufficient to effect a prophylactic or therapeutic response in the animal over a reasonable time frame. The amount of active ingredient that can be combined with the carrier materials to produce a single dosage form will vary depending upon the host treated and the particular mode of administration. The size of the dose also will be determined by the existence, nature, and extent of any adverse side-effects that might accompany the administration of a particular composition. Suitable doses and dosage regimens can be determined by comparisons to antiretroviral chemotherapeutic agents that are known to inhibit the proliferation of a retrovirus in an infected individual. The preferred dosage is the amount which results in inhibition of retroviral proliferation, particularly the proliferation of multidrug-resistant retroviral HIV, without significant side effects. In proper doses and with suitable administration of certain compounds, the present invention provides for a wide range of antiretroviral chemotherapeutic compositions.
The multidrug-resistant retroviral protease inhibitors of the present invention also can be administered in combination with other antiretroviral compounds such as, for example, ritonavir, amprenavir, saquinavir, indinavir, AZT, ddl, ddC, D4T, lamivudine, 3TC, and the like, as well as admixtures and combinations thereof, in a pharmaceutically acceptable carrier. The individual daily dosages for these combinations can range from about one-fifth of the minimally recommended clinical dosages to the maximum recommended levels for the entities when they are given singly.
The present invention also provides a method of inhibiting the protease of a multidrug-resistant retrovirus in a mammal infected with a protease-producing, multidrug- resistant retrovirus, which method comprises administering to the mammal a multidrug-resistant, retroviral protease- inhibiting effective amount of a compound of the present invention, so as to inhibit the proliferation of the retrovirus in the mammal. More generally, the present invention provides a method of treating a retroviral, particularly an HIV, infection and, more particularly, a multidrug-resistant HIV infection, in a mammal, particularly a human, wherein a protease-inhibiting effective amount of one or more of the present inventive compounds, alone or in combination with one or more other antiretroviral therapies or compounds, such as AZT, ddl, ddC, D4T, lamivudine or 3TC, is administered to a mammal infected with a retrovirus, particularly HIV, and more particularly multidrug-resistant HIV, the proliferation of which is inhibited by a retroviral protease-inhibiting effective amount of a present inventive compound.
The dose administered to an animal, particularly a human in the context of the present invention should be sufficient to effect a therapeutic response in the animal over a reasonable time frame. The dose will be determined by the strength of the particular composition employed and the condition of the animal, as well as the body weight of the animal to be treated. The size of the dose will also be determined by the existence, nature, and extent of any adverse side-effects that might accompany the administration of a particular compound. Other factors which effect the specific dosage include, for example, bioavailability, metabolic profile, and the pharmacodynamics associated with the particular compound to be administered in a particular patient. One skilled in the art will recognize that the specific dosage level for any particular patient will depend upon a variety of factors including, for example, the activity of the specific compound employed, the age, body weight, general health, sex, diet, time of administration, route of administration, rate of excretion, drug combination, CD4 count, the potency of the active compound with respect to the particular retroviral strain to be inhibited, and the severity of the symptoms presented prior to or during the course of therapy. What constitutes a retroviral protease-inhibiting amount, more particularly a HIV protease-inhibiting amount, and more particularly a multidrug-resistant HIV protease-inhibiting amount, of one or more compounds of the present invention, alone or in combination with one or more other currently available antiretroviral compounds can be determined, in part, by use of one or more of the assays described herein. Similarly, whether or not a given retrovirus is inhibited by a retroviral protease-inhibiting amount of a compound of the present invention can be determined through the use of one or more of the assays described herein or in the scientific literature or as known to one of ordinary skill in the art. One skilled in the art will appreciate that suitable methods of administering the compounds and pharmaceutical compositions of the present invention to an animal are available, and, although more than one route can be used to administer a particular composition, a particular route can provide a more immediate and more effective reaction than another route . One or more of the present inventive compounds, alone or in combination with one or more other antiretroviral therapies or compounds, can be administered to a mammal, in particular a human, as a prophylactic method to prevent retroviral, particularly multidrug-resistant retroviral, such as multidrug-resistant HIV, infection.
Generally, the present method of inhibiting the retroviral protease of a multidrug-resistant retrovirus in a mammal comprises administering to the mammal a multidrug- resistant, retroviral protease-inhibiting effective amount of at least one compound of Formula (I) as disclosed herein. In a preferred embodiment, the present method of inhibiting the retroviral protease of a multidrug-resistant retrovirus in a mammal comprises administering to the mammal a multidrug-resistant, retroviral protease- inhibiting effective amount of at least one compound of Formula (IA) or Formula (IB) , or a pharmaceutically acceptable salt, prodrug, or ester thereof. In a further preferred embodiment, the present method of inhibiting the retroviral protease of a multidrug-resistant retrovirus in a mammal comprises administering to the mammal a multidrug- resistant, retroviral protease-inhibiting effective amount of at least one compound of Formula (IC) or Formula (ID) , or a pharmaceutically acceptable salt, prodrug, or ester thereof. In a highly preferred embodiment, the present method of inhibiting the retroviral protease of a multidrug-resistant retrovirus in a mammal comprises administering to the mammal a multidrug-resistant, retroviral protease-inhibiting effective amount of at least one compound of Formula (IE) , or a pharmaceutically acceptable salt, prodrug, or ester thereof.
Numerous compounds have been identified that exhibit potent antiretroviral activity, in particular retroviral protease activity, against wild-type HIV. However, among the numerous known potent inhibitors of wild-type HIV and wild-type HIV protease, there are few compounds that have appreciable inhibitory activity against mutant HIV. Indeed, even the most potent wild-type HIV protease inhibitors exhibit little, if any, activity against any one particular mutant strain of HIV. Typically, if a wild-type HIV protease inhibitor exhibits antiretroviral activity against a mutant strain of HIV, the antiviral activity is extremely limited with respect to the mutant strains, and is active with respect to only one or a few particular mutant HIV retroviruses . Surprisingly, it has been discovered that compound 32 (shown in Figure 3A) , which is a potent wild-type HIV inhibitor, possesses remarkably potent and unprecedented broad-spectrum antiviral activity against a wide range of clinically isolated, multiply drug-resistant, human immunodeficiency viruses. The mutant viruses were obtained from infected humans who had received several antiviral drugs. Although applicants do not wish to abound by any one particular theory, it is believed that the combination of the bicyclic ligand (vii) with isostere (vi) gives the antiretroviral compounds of the present invention the unique ability to bind to the active site of the mutant proteases of multiply drug-resistant human immunodeficiency viruses generally, which trait has heretofore not been reported with respect to any known chemotherapeutic and/or experimental HIV protease inhibitor. A wild- ype preliminary screen was utilized to determine the antiretroviral activity of analogs against wild-type HIV. It is predicted that compounds of Formula (I) , which have potent antiretroviral or protease-inhibitory activity against wild-type HIV, also will be potent inhibitors of multiple drug-resistant HIV. The protease inhibitory activity of the compounds of the present invention can be measured by any suitable means. Preferably, protease inhibitory activity is determined by a continuous fluorogenic assay for measuring the anti-HIV protease activity of a protease inhibitor, which method comprises adding a solution of HIV protease to a substrate stock solution, in which the substrate has the formula Ala-Arg-Val-Tyr-Phe (N02) -Glu-Ala-Nle-NH2, to provide a substrate reaction solution. The fluorescence of the substrate reaction solution is then measured at specified time intervals. The solution of HIV protease is then added to a solution of the protease inhibitor and the substrate stock solution, to provide an inhibitor-substrate reaction solution. The fluorescence of the inhibitor-substrate reaction solution is then measured at specified time intervals. The initial velocity of the inhibitor-substrate reaction solution is then calculated by applying the equation:
V=V0/2Et ( { [Ki (1+S/K +It-Et] 2+4Ki (1+S/K Et}1/2- [K, ( (1+S/K +It- Et] ) , wherein V is the initial velocity of the inhibitor reaction solution, V0 is the initial velocity of the substrate reaction solution, K,. is the Michaelis-Menten constant, S is the substrate concentration, Et is the protease concentration, and It is the inhibitor concentration .
The continuous fluorogenic assay described herein is highly sensitive and particularly useful for the prediction of the antiviral inhibitory activity of a compound against mutant HIV, more particularly multiple mutant HIV, specifically multidrug-resistant human immunodeficiency viruses. This assay is distinctly advantageous in that it is more sensitive than standard assays in determining the activity of protease inhibitors against multidrug-resistant HIV. The continuous flourogenic assay described herein is disclosed in more detail in Example 13.
To determine the activity of the compounds of the present invention against multidrug resistant HIV, the IC50's were measured against a panel of clinically isolated mutant HIV isolates. The IC50's were determined by utilizing the PHA-PBMC exposed to HIV-1 (50 TCIDS0 dose/lX106 PBMC) as target cells and using the inhibition of p24 Gag protein production as an endpoint . The assay protocol for determining the multidrug-resistant retroviral inhibitory activity of the compounds of the present invention is disclosed in more detail in Example 14.
The present invention further provides a method of synthesizing the multidrug-resistant, retroviral protease- inhibiting compounds of the present invention. The present synthesis method is generally illustrated in Figure 4, which is a representation of the synthetic approach to preparing a preferred series of the present compounds, wherein a compound of Formula (I) is synthesized in several steps starting from azidoepoxide (i) , wherein R1-R17, m, n, p, Q,
W, X, y, and z are defined as above. Referring to Figure 4, amine (ii) is nucleophilically added to azidoepoxide (i) , providing aminoalcohol (iii) . The amine functional group of aminoalcohol (iii) is then reacted with intermediate (iv) , wherein L represents a leaving group (e.g., halogen, N- oxysuccinimide) , which can be displaced by the amine of aminoalcohol (iii) , to provide azide (v) . Reduction of azide (v) , or, when R5 is not hydrogen, reductive amination with aldehyde R5CH=0, provides intermediate (vi) , which is subsequently coupled with activated bicyclic ligand (vii) , to provide compounds of Formula I. Of course, it will be appreciated by a person of ordinary skill in the art that there are combinations of substituents, functional groups, R-groups, and the like, which are reactive under particular reaction conditions, and require the utilization of an appropriate protecting group or groups, which are known in the art, to ensure that the desired synthetic transformation will take place without the occurrence of undesired side reactions. For example, possible substituents at Rs (e.g., NH2) can be competitive nucleophiles requiring the attachment of an appropriate protecting group thereon (e.g., benzyloxycarbonyl , tert-butoxycarbonyl) in order obtain proper selectivity in the ring opening of epoxide (i) with amine (ii) .
Figures 1-3B illustrate the synthesis of a preferred series of compounds of the present invention. Figure 1, which is a synthetic scheme for the synthesis of a particular sulfonamide, illustrates the synthesis of a preferred isosteric core, particularly, the sulfonamide isosteric core represented by aminosulfonamide 15. With reference to Figure 1, aminosulfonamide core 15 can be synthesized by initially providing azidoepoxide 11 and subjecting it to nucleophilic addition with amine 12 to give aminoalcohol 13, which is subsequently converted to sulfonamide 14 by reaction with 4-methoxybenzenesulfonyl chloride. The azide group of 14 is then reduced to provide aminosulfonamide 15, which can be used as a core for synthesizing numerous multidrug-resistant retroviral protease inhibitors of the present invention.
Figure 2, which is a reaction scheme detailing the preparation of bicyclic alcohols, illustrates the synthesis of a preferred series of bicyclic ligands, particularly bis- tetrahydrofurans 25 and 26. With reference to Figure 2, dihydrofuran 21 is treated with N-iodosuccinimide in the presence of propargyl alcohol to give iodoether 22, which is cyclized to methylene-substituted bis-tetrahydrofuran 23. Ozonolysis of the exo-methylene residue of 23, followed by reduction, provides bicyclic racemic alcohol 24, which is resolved to give, separately, bicyclic alcohol 25 and its enantiomeric acetate ester 26, which ester group of 26 is subsequently hydrolyzed to afford enantiomer 27.
Figures 3A and 3B, which are reaction schemes describing the preparation of two protease inhibitors, illustrate the preparation of two preferred multidrug- resistant HIV protease inhibitors of the present invention. With reference to Figure 3A, compound 32 was synthesized by coupling succinimidocarbonate 31 with aminosulfonamide 15. Succinimidocarbonate 31 was prepared by reacting optically pure bicyclic alcohol 25 with disuccinimidyl carbonate in the presence of triethylamine. Inhibitor 34, which possesses the enantiomeric bis-tetrahydrofuranyl ligand (relative to inhibitor 32) , was prepared in the same fashion, except that the enantiomeric bicyclic alcohol 27 was used instead of alcohol 25, as illustrated in Figure 3B. The following examples further illustrate the present invention but, of course, should not be construed as in any way limiting its scope.
Example 1
This example describes the synthesis of exemplary epoxide 11 (Figure 1) , which is used as an intermediate in the synthesis of a particular series of compounds within the scope of the present invention. Anhydrous CuCN (4.86 g, 54 mmol) was added to a solution of butadiene monooxide (38 g, 540 mmol) in anhydrous tetrahydrofuran (1.2 L) and the resulting mixture was stirred at -78°C. Commercial phenyl magnesium bromide solution (Aldrich) in ether (65 mmol) was added dropwise over a period of 10 min. The resulting reaction mixture was then allowed to warm to 0 °C and it was continued to stir until the reaction mixture was homogeneous. After this period, the reaction mixture was cooled to -78 °C and 0.58 mole of phenylmagnesium bromide solution in ether was added dropwise for 30 min. The reaction mixture was allowed to warm to 23 °C for 1 h. The reaction was quenched by slow addition of saturated aqueous NH4C1 (120 mL) followed by NH40H (70 mL) , saturated NH4C1 (500 ML) and then H20 (300 mL) . The aqueous layer was thoroughly extracted with ethyl acetate (2 x 300 mL) . The combined organic layers were dried over anhydrous Na2S04, filtered, and concentrated under reduced pressure. The residue was distilled under vacuum (0.12 torr) at 95 °C to give trans- 4-phenyl-2-butene-l-ol (75.6 g) . To a suspension of powdered 4A molecular sieves (6.6 g) in anhydrous methylene chloride (750 mL) , titanium tetraisopropoxide (Aldrich, 3.2 mL) and then diethyl D- tartrate (2.3 mL) were added. The resulting mixture was cooled to -22 °C and tert-butylhydroperoxide solution in isooctane (Aldrich, 430 mmol) was added over a period of 10 min. The mixture was stirred an additional 30 min and then a solution of trans-4-phenyl-2-butene-l-ol (32.6 g, 213 mmol) , in anhydrous methylene chloride (120 mL) , was added dropwise over a period of 40 min at -22 °C. The reaction mixture was then aged in a freezer at -22 °C for 24 h. After this period, water (100 mL) was added to the reaction mixture at -22 °C and the mixture was allowed to warm to 0 °C. After stirring at 0 °C for 45 min, 20% NaOH in brine (20 mL) was added. The resulting mixture was then allowed to warm to 23 °C and was stirred at that temperature for 1 h. After this period, the layers were separated and the aqueous layer was extracted with methylene chloride (2 x 200 mL) . The combined organic layers were dried over anhydrous Na2S04 and concentrated under reduced pressure . The residue was diluted with toluene (800 mL) and then evaporated under reduced pressure. The residue was chromatographed over silica gel (35% ethyl acetate in hexane as eluent) to provide (2R, 3R) -epoxy-4-phenylbutan- l-ol (21.8 g) .
To a solution of titanium ispropoxide (12 mL) in anhydrous benzene (250 mL) was added azidotrimethylsilane (11 mL) and the resulting mixture was refluxed for 6 h. A solution of (2R, 3R) -epoxy-4-phenylbutan-l-ol (5.32 g) in anhydrous benzene (25 mL) was added to the above refluxing mixture. The resulting mixture was refluxed for addition 25 min. After this period, the reaction mixture was cooled to 23 °C and the reaction was quenched with aqueous 5% H2S04 (400 mL) . The resulting mixture was stirred for 1 h and the layers were separated and the aqueous layer was extracted with ethyl acetate (2 x 300 mL) . The combined organic layers were washed with saturated NaHC03 (200 mL) , dried over Na2S04 and concentrated under reduced pressure to afford the (2S, 3S) -2-hydroxy-3-azido-4-phenyl-butan-12-ol (5.1 g) as a white solid (mp 81-82 °C) .
To a stirred solution of the azidodiol (5.1 g) in chloroform (100 mL) at 23 °C, 2-acetoxyisobutyryl chloride (Aldrich, 5mL) was added. The resulting reaction mixture was stirred at 23 °C for 8 h. The reaction was quenched by addition of saturated sodium bicarbonate (100 mL) and the resulting mixture was stirred 30 min. The layers were separated and the aqueous layer was extracted with chloroform (2 x 200 mL) . The combined organic layer was extracted with chloroform (2 x 200 mL) . The combined organic layers were dried over Na2S04 and evaporated under reduced pressure. The resulting residue was dissolved in anhydrous THF (50 mL) and solid NaOMe (2.1 g) was added. The mixture was stirred for 4 h at 23 °C and after this period, the reaction was quenched with saturated NH4C1 (50 mL) . The resulting mixture was extracted with ethyl acetate (2 x 200 ML) . The combined organic layers were dried over anhydrous Na2S04 and concentrated under reduced pressure to give a residue, which was chromatographed over silica gel (10% ethyl acetate in hexanes) to afford the 3 (S) -azido- (1,2R) -epoxy-4-phenylbutane 11 (3.3 g) as an
Oil: 'H NMR (300 MHz): CDCl3; δ 7.4-7.2 (m, 5H, ) , 3.6 (m, 1H) , 3.1 (m, 1H) , 2.95 (dd, 1H, J = 4.6, 13.9 Hz), 2.8 (m, 3H) .
Example 2
This example illustrates the synthesis of azidoalcohol 13 (Figure 1) , which can be used as an intermediate in the synthesis of a preferred series of the compounds of the present ivention.
To a stirred solution of above azidoepoxide 11 (700 mg, 3.7 mmol) in ispropanol (70 mL) was added isobutyl amine (Aldrich, 0.74 mL 7.4 mmol) and the resulting mixture was heated at 80 °C for 12 h. After this period, the reaction mixture was concentrated under reduced pressure and the residue was chromatographed over silica gel to provide azidoalcohol 13 (800 mg) as an oil.
Example 3
This example illustrates the synthesis of azidosulfonamide 14, the structure of which is shown in Figure 1.
To a stirred solution of 13 (600 mg, 2.28 mmol) in CH2C12 (20 mL) was added 4-methoxybenzenesulfonyl chloride (Aldrich, 530 mg, 2.52 mmol) and saturated aqueous NaHC03 (6 mL) . The resulting heterogeneous mixture was stirred at 23 °C for 12 h. The reaction was diluted with CH2C12 and the layers were separated. The organic layer was washed with brine, dried over anhydrous magnesium sulfate and concentrated to dryness . The residue was chromatographed over silica gel (25% ethyl acetate/hexane) to provide 900 mg of azidosulfonamide 14.
Example 4
This example illustrates the preparation of aminosulfonamide 15 via reduction of azidosulfonamide 14, as shown in Figure 1. A solution of 14 (1.53 g) in THF (45 mL) , MeOH (10 mL) and acetic acid (0.5 mL) , was shaken with 10% palladium on carbon catalyst (200 mg) at 50 psi hydrogen pressure for 2 h. Removal of the catalyst by filtration over celite and concentration under reduced pressure gave a crude residue, which was diluted with CH2C12 (100 mL) , and was washed successively with saturated aqueous NaHC03 and brine. The organic layer was dried over MgS04 and concentrated to give the corresponding aminosulfonamide 15 (1.2 g) .
Example 5
This example demonstrates the synthesis of trans-2- (propargyloxy) -3-iodotetrahydrofuran 22 (Figure 2).
To a stirred, ice-cold suspension of 15 g (66.6 mmol) of N-iodosuccinimide in 150 mL of CH2C12 was added a mixture of dihydrofuran 21 (66.6 mmol, 4.67 g, 5.1 L) and propargyl alcohol (100 mmol, 5.0 g, 5.2 mL) of in 50 mL of CH2C12 over 20 min. After warming to 24 °C with stirring over 2 h, 200 mL of water were added and the stirring continued for 1 h. The layers were separated and the aqueous layer was extracted with 2 x 100 mL of CH2C12. The combined organic extracts were washed with brine solution containing small amount of Na2S203 (70 mg) , dried over anhydrous Na2S04, filtered, and concentrated. Chromatography over silica gel using 30% ethyl acetate in hexane afforded (15.4 g, 92%) the title iodoether 22 as an oil.
Example 6 This example illustrates the synthesis of (±) - (3aR, 6aS) and (3aS, 6aR) -3-methylene-4H-hexahydrofuro- [2, 3- b] furan 23, as shown in Figure 2. To a refluxing solution of (20.7 mL, 77 mmol) tributyltin hydride containing AIBN (100 mg) in toluene (200 mL) was added dropwise a solution of 15.4 g (61 mmol) of iodotetrahydrofuran 22 in toluene (50 mL) over a period of 1 h. The resulting mixture was stirred at reflux for an additional 4 h (monitored by TLC) . The mixture was then cooled to 23 °C and concentrated under reduced pressure. The residue was partitioned between petroleum ether and acetonitrile (200 mL of each) and the acetonitrile (lower) layer was concentrated. The residue was purified by chromatography on silica gel, using 10% ethyl acetate in hexane as the eluent to provide the title product 23 (5.84 g, 76%) as an oil .
Example 7
This example demonstrates the synthesis of (±) - (3SR, 3aRS, 6aS) and (3R, 3aS, 6aR) -3-hydroxy-4H- hexahydrofuro [2, 3-b] furan 24, as shown in Figure 2.
A stream of ozone was dispersed into a solution of 15 (5.84 g, 46.4 mmol) at -78 °C in 150 mL of methanol and 150 mL of CH2Cl2for 30 min. The resulting blue solution was purged with nitrogen until colorless, then quenched with 20 mL of dimethyl sulfide and the resulting mixture was allowed to warm to 23 °C. The mixture was concentrated under reduced pressure to afford the crude ketone . The resulting crude ketone was dissolved in ethanol (50 mL) and the solution was cooled to 0 °C and sodium borohydride (2.1 g, 55.6 mmol) was added. The reaction mixture was stirred for an additional 2 h at 0 °C and then quenched with 10% aqueous citric acid (10 mL) . The resulting mixture was concentrated under reduced pressure and the reside was partitioned between ethyl acetate and brine. The layers were separated and the aqueous layer was extracted with ethyl acetate (2 x 100 mL) . The combined organic layers were dried over anhydrous-Na2S04 and concentrated carefully under reduced pressure. The resulting residue was chromatographed over silica gel using 30% ethyl acetate in hexane as the eluent to furnish (4.52 g, 75%) the title racemic alcohol 24 as an oil.
Example 8
This example illustrates the preparation of immobilized Amano Lipase 30, which was used to resolve racemic aminoalcohol 24 (Figure 2) .
Commercially available 4 g of Celite 521 (Aldrich) was loaded on a buchner funnel and washed successively with 50 mL of deionized water and 50 mL of 0.05 N phosphate buffer (pH = 7.0; Fisher Scientific). The washed celite was then added to a suspension of 1 g of Amano lipase 30 in 20 mL of 0.05 N phosphate buffer. The resulting slurry was spread on a glass dish and allowed to dry in the air at 23 °C for 48 h (weight 5.4 g; water content about 2% by Fisher method) .
Example 9
This example demonstrates the synthesis of (3R,3aS, 6aR) 3-hydroxyhexahydrofuro [2, 3-b] furan 25 by immobilized lipase catalyzed acylation, as illustrated in Figure 2. To a stirred solution of racemic alcohol 24 (2 g, 15.4 mmol) and acetic anhydride (4 g, 42.4 mmol) in 100 mL of DME was added 2.7 g (about 25% by weight of lipase PS30) of immobilized Amano lipase and the resulting suspension was stirred at 23 °C. The reaction was monitored by TLC and B. NMR analysis until 50% conversion was reached. The reaction mixture was filtered and the filter cake was washed repeatedly with ehtyl acetate. The combined filtrate was carefully concentrated in a rotary evaporator, keeping the bath temperature below 15 °C. The residue was chromatographed over silica gel to provide 843 mg (42%) of 25 (95% ee; aD 23° -11.9°, MeOH) ; 'H-NMR (CDC13) d 1.85 (m, 2H), 2.3 (m, IH) , 2.9 (m, IH) , 3.65 (dd, J=7.0, 9.1, IH) ,
3.85-4.0(m, 3H) , 4.45 (dd, J=6.8, 14.6, IH) , 5.7 (d, J=5.1, IH) ; also, 1.21 g of 26 after washing with 5% aqueous sodium carbonate (45%, aD 23°+31.8°, MeOH); XH-NMR (CDCl3)d 1.85-2.1 (m, 2H) , 2.1 (s, 3H) , 3.1 (m, IH) , 3.75(dd, J=6.6, 9.2, IH) , 3.8-4.1 (m, 3H) , 5.2 (dd, J=6.4, 14.5, IH) , 5.7 (d, J=5.2, IH) . Acetate 26 was dissolved in THF (5mL) and 1 M aqueous LiOH solution (20 mL) was added to it. The resulting mixture was stirred at 23 °C for 3 h and the reaction was extracted with chloroform (3 x 25 mL) . The combined organic layers were dried over anhydrous Na2S04 and evaporated under reduced pressure . The residue was chromatographed over silica gel to provide 733 mg of 27 (97% ee; αD 23° -12.5°, MeOH) .
Example 10
This example demonstrates the synthesis of activated carbonates 31 and 33, as illustrated in Figures 3A and 3B.
To a stirred solution of [3R,3aS, 6aS] -3- hydroxyhexahydrofuro [2, 3-b] furan 25 (65 mg, 0.5 mmol) in dry CH3CN (5 mL) at 23 °C were added disuccinimidyl carbonate (192 mg, 0.75 mmol) and triethylamine (0.25 mL) . The resulting mixture was stirred at 23°C for 12 h. The reaction was quenched with saturated aqueous NaHC03 (10 mL) and the mixture was concentrated under reduced pressure . The residue was extracted with CH2C12 (2 x 25 mL) and the combined organic layers were washed with brine (10 mL) and dried over anhydrous Na2S04. Evaporation of the solvent under reduced pressure gave a residue, which was chromatographed over silica gel (50% ethyl acetate/hexane) to furnish (3R, 3aS, 6aR) 3-hydroxyhexahydrofuro [2 , 3- b] furanyl-succinimidyl carbonate 31 (70 mg) as a brown oil. Carbonate 33 (65 mg) was prepared from 60 mg of alcohol 27 by following a similar procedure.
Example 11
This example illustrates the preparation of multidrug- resistant HIV inhibitor 32, as illustrated in Figure 3A.
To a stirred solution of amine 15 (82 mg, 0.2 mmol) in dry CH2C12 (5 mL) was added succinimidyl carbonate 31 (55 mg, 0.18 mmol) . The resulting solution was stirred at 23 °C for 12 h. After this period, the reaction was quenched with saturated aqueous NaHC03 (10 mL) and diluted with
CH2C12 (25 mL) . The layers were separated and the organic layer was washed with brine (15 mL) and dried over anhydrous Na2S04. Evaporation of the solvent under reduced pressure afforded a residue, which was purified by silica gel chromatography (75% ethyl acetate/hexane) to furnish compound 32 (85 mg) as a white solid (m.p 55-58°C) . -NMR (CDC13, 400 MHz); δ 7.71 (d, 2H, J=8.8 Hz), 7.29-7.20 (m, 5H) , 6.99 (d,2H, J=7.0 Hz) , 5.65 (d, IH, J=5.19) , 5.01 (m, 2H) , 3.95-3.82 (m, 7H) , 3.69 (m,2H), 3.0-2.7 (m, 6H) , 1.85 (m, IH) , 1.64-1.45 (m, 3H) , 0.90 (two d, 6H, J=6.5Hz, 6.6 Hz) . Example 12
This example illustrates the preparation of multidrug- resistant HIV inhibitor 33, as illustrated in Figure 3B.
Carbonate 33 (55 mg) was reacted with amine 15 (82 mg, 0.2 mmol) according to the procedure mentioned above to provide compound 34 (81 mg) . XH-NMR (CDC13, 300 MHz) ; δ 7.69(d, 2H, J=8.8 Hz), 7.28-7.21 (m,5H), 6.87 (d,2H,J=5.84 Hz), 5.67 (d,lH,J=5.46 Hz), 5.0 (m, 2H) , 3.86-3.81 (m, 7H) , 3.58 (dd, 2H, J=6.6 Hz, 3.6 Hz, 3.17-2.73 (m, 6H) , 2.17- 1.83 (m, 4H) , 0.90 (two d, 6H, J=6.5Hz, 6 . 6 Hz).
Example 13
This example describes the protocol for the sensitive continuous fluorogenic assay for HIV protease described above and its application. Using this assay, the inhibitory activity of compound 32 (Fig. 3A) was tested against the proteases of wild-type HIV-1 (WT) and various mutant strains: D30N, V32I, I84V, V32I/I84V, M46F/V82A, G48V/L90M, V82F/I84V, V82T/I84V, V32I/K45I/F53L/A71V/I84V/L89M,
V32I/L33F/K45I/F53L/A71V/I84V, and 20R/36I/54V/71V/82T, which protease enzymes are available from Dr. John W. Erickson, Structural Biochemistry Program, SAIC, Frederick, P.O. Box B, Federick, MD 21702-1201, upon written request. The inhibition constant for wild-type HIV-1 , Kimnt/Kiwt ratio, and the vitality was measured. (See Gulnik et al . , Biochemistry, 34 , 9282-9287 (1995) . Protease activity was measured using the fluorgenic substrate Lys-Ala-Arg-Val- Tyr-Phe (N02) -Glu-Ala-Nle-NH2 (Bachem Bioscience, Inc.). (See Peranteau et al . , D.H. (1995) Anal . Biochem. ) .
Typically, 490 μl of 0.125 M ACES-NaOH buffer, pH 6.2, containing 1.25 M (NH4)2S04, 6.25 mM DTT and 0.1% PEG-8000 was mixed with 5 μl of titrated protease (final concentration 1-5 nM) and incubated 3 min at 37 °C. The reaction was initiated by the addition of 5 μl of substrate stock solution in water. Increase in fluorescence intensity at the emission maximum of 306 nm (excitation wavelength was 277 nm) was monitored as a function of time using Aminco Bowman-2 luminescence spectrometer (SLM Instruments, Inc.). The initial rate of hydrolysis was calculated by second degree polynomial fit using SLM AB2 2.0 operating software. Kinetic parameters were determined by nonlinear regression-fitting of initial rate versus substrate concentration data to the Michaelis-Menten equation using program Enzfiter version 1.05.
For inhibition studies, inhibitors were prepared as stock solutions at different concentrations in dimethylsulfoxide . In a typical experiment 485 μl of 0.125 M ACES-NaOH buffer, pH 6.2, containing 1.25 M (NH4)2S04, 6.25 mM DTT AND 0.1% PEG-8000, was mixed with 5 μl of inhibitor stock solution and 5 μl of titrated protease (final concentration of 1-5 nM) and preincubated 3 min at 37 °C. The reaction was initiated by the addition of 5 μl of substrate stock solution in water. For data analysis, the mathematical model for tight-binding inhibitors was used. (See Williams and Morrison (1979) , In: Methods of Enzymol. 63, (ed. D.L. Purich) , 437-467, Academic Press,
NY, London) . The data were fitted by nonlinear regression analysis to the equation: V=V0/2Et ( { [K± (1+S/K +It- Et]2+4Ki(l+S/Km)Et}12- [Ki( (1+S/Km)+It-Et] ) with the program Enzfiter (version 1.05), where V and V0 are initial velocities with and without inhibitor, respectively, K., is a Michaelis-Menten constant, and S, Et and It are the concentrations of substrate, active enzyme, and inhibitor, respectively. The results are shown below in Table 1.
Table 1
Enzyme K, (pM) Kl t/Kι
WT 14 1
D30N <5 0.33
V32I 8 0.57
184V 40 2.85
V32I/I84V 70 5
M46F/V82A <5 0.33
G48V/ 90M <5 0.33
V82F/I84V 7 0.5
V82T/I84V 22 1.57
V32I/K45I/F53L/A71V/I 31 2.2
84V/ 89M
V32I/L33F/K45I/F53 /A 46 3.3
71V/I84V
20R/36I/54V/71V/82T 31 2.2
The above results demonstrate that compound 32 is a potent inhibitor of multidrug-resistant HIV protease. These data provide strong evidence of the potent and broad- spectrum multidrug-resistant antiretroviral activity of compound 32.
Example 14
This example illustrates the potent and broad-spectrum multidrug-resistant antiretroviral activity of an exemplary compound of the present invention.
Compound 32, shown in Figure 3A, was tested side-by- side with four other known HIV-1 protease inhibitors against various wild-type HIV-1 strains (HIV-lERS104pre, HIV- lLfa , and HIV-1BAL) , and mutant multidrug-resistant HIV-1 strains clinically isolated from patients receiving several antiviral drugs. The mutant multidrug-resistant HIV-1 strains, numbered 1-8, are based on the profile of the patients from which the mutant viruses were isolated. The patients from which the mutant strains were isolated had a history of anti-HIV therapy with a variety of different drugs such as, for example, ritonavir, saquinavir, indinavir, amprenavir, AZT, ddl, ddC, d4T, 3TC, ABV (abacavir) , DLV (delaviridine) , and PFA (foscarnet) . The patient profiles are shown below in Table 2.
Table 2
Patient/ CD4* HIV- 1 RNA Months on Prior and Present Anti-HIV
Isolate ( /mm3) level Antiviral Therapy
Code (copies/mL) Therapy-
361 246,700 64 AZT, ddl, ddC, d4T, 3TC, ABV, IDV, RTV, SQV, AMV,
DLV
2 3 553,700 46 AZT, ddl, ddC, d4T, 3TC,
ABV, IDV, SQV, AMV
3 108 42,610 39 AZT, ddl, ddC, d4T, 3TC,
ABV, IDV, SQV, AMV
4 560 60, 000 81 AZT, ddl, ddC, U90, d4T,
3TC, ABV, IDV, SQV, AMV
5 - - 32 AZT, ddl, ddC, d4T, 3TC,
ABV, IDV, SQV, AMV
6 - - 34 AZT, ddl, ddC, d4T, 3TC,
ABV, IDV, SQV, AMV
7 - - 83 AZT, ddl, ddC, d4T, 3TC,
ABV, IDV, SQV, RTV, AMV
8 _ _ 69 AZT, ddl, ddC, d4T, 3TC,
PFA, ABV, IDV, SQV, AMV
The four known chemotherapeutic HIV protease inhibitors used for comparative purposes in this example have been utilized in actual human HIV chemotherapy, and are: Ritonavir ("RTV," Abbott Laboratories); Indinavir ("IDV," Merck Research Laboratories); Amprenavir (AMV, See Ghosh et al . , Bioorg. Med. Chem. Lett . , 8, 687-690 (1998)); and Saquinavir ("SAQ", Roche Research Centre). The IC50 values (μM) for all five compounds were determined with respect to wild-type and multidrug-resistant HIV-1.
The IC50's were determined by utilizing the PHA-PBMC exposed to HIV-1 (50 TCID50 dose/lX106 PBMC) as target cells and using the inhibition of p24 Gag protein production as an endpoint . All drug sensitivities were performed in triplicate. In order to determine whether the HIV isolates were SI or NSI, an aliquot of viral stock supernatant, containing 100 TCIDS0, was cultured with 1 X 105 MT-2 cells in a 12-well plate. Cultures were maintained for four weeks and were examined for syncytium formation twice a week. The results are shown below in Table 3.
Table 3
ICS0 (μM)
Pheno- Patient/ type Isolate code RTV IDV AMV SAQ Compound (See Table 2) 32
SI HIV- lκRsl0 pre 0.055 0.013 0.021 0.01 <0.001
SI HIV-1^ 0.0047 0.019 0.019 0.0054 0.0004
NSI HIV-1-.-. 0.018 0.0056 0.014 0.0037 0.0004
1 >1 >1 0.29 0.29 0.002
2 >1 0.24 0.24 0.035 <0.001
3 >1 0.46 0.33 0.036 <0.001
4 >1 0.24 0.4 0.033 0.001
NSI 5 >1 0.8 0.28 0.24 0.002
6 >1 0.37 0.11 0.19 <0.001
7 >1 >1 0.42 0.12 0.004
8 >1 >1 0.22 0.009 0.001
The above IC50's clearly demonstrate the broad-spectrum and extraordinarily potent activity of compound 32 against wild-type HIV-1 and the eight different multidrug-resistant clinical isolates tested. For example, compound 32 exhibits nanomolar and sub-nanomolar potency against all the multidrug-resistant strains tested, whereas Ritonavir, a reasonably potent wild-type inhibitor, is virtually inactive toward the resistant viruses. Moreover, compound 32 is about 9 to about 150 times more potent against the multidrug-resistant viruses than Saquinavir, one of the most potent known compounds against known multidrug-resistant strains of HIV-1. Patients with viral plasma loads greater than 10,000 RNA copies/mm3 are at risk for developing fatal AIDS complications. There are no effective therapeutic options currently available for these patients infected with these multidrug resistant viruses. Compound 32, and analogs thereof, are predicted to be potent inhibitors of these viral strains in vivo.
Example 15
This example demonstrates the wild-type antiretroviral activity of the compounds of the present invention.
It is predicted that the activity of the present inventive compounds against wild-type HIV protease correlates with of antiretroviral activity against multidrug-resistant HIV. Numerous compounds of the present invention were tested against wild-type HIV (See, Ghosh et al., J. Bioorg. Med . Chem . Lett . , 8, 6870690 (1998)). Exemplary compounds, which demonstrate potent wild-type HIV protease activity, are shown below in Table 4.
Table 4
Figure imgf000059_0001
"R5 R5 R6 Ki (nM) ΪD^ Comments
(nM)
Figure imgf000059_0002
Example 16
This example demonstrates the oral absorption of compound 32 in an in vivo experimental model .
Compound 32 was orally administered to a rat at a dose of about 40 mg per kg body mass, using a PEG 300 vehicle as a carrier. The plasma blood levels of compound 32 were measured over a 24 h period after oral administration. The results are shown in Table 5 below.
Table 5
Time After Administration Plasma Concentration
Hours Minutes (nM) (ng/mL)
0.28 17 1598 898
1.00 60 878 493
2.07 124 626 352
4.01 240 670 377
6.01 360 594 334
8.05 483 1115 627
12.04 722 246 138
14.08 845 102 57
24.00 1440 82 46
These results demonstrate that compound 32 maintains high blood levels (e.g., nearly 0.6 uM after 6 hours) long after oral administration. Although applicants do not wish to abound by any one particular theory, it is believed that the non-peptide structure of the compounds of the present invention make them less prone to biological (e.g., enzymatic) degradation, and thereby contribute to their prolonged blood levels after oral administration. From these data, the compounds of the present invention are predicted to have excellent oral bioavailability in humans, and maintain therapeutically significant blood levels over prolonged periods after oral administration. Example 17
This example demonstrates the influence of human protein binding on the antiviral activity of compound 32. Several potent and orally bioavailable HIV protease inhibitors failed to have in vivo antiviral efficacy. These failures have been ascribed, but not definitively proven, to be due to excessive binding to human plasma proteins, particularly serum albumin and AAG. The protein binding against human alpha acid glycoprotein (AAG, 10 μM) and against human serum albumin (HAS, 300 μM) were compared for compound 32 and amprenavir, a structurally related analog that is an FDA approved drug. The results are shown in Table 6. Table 6
Figure imgf000061_0001
amprenavir 0.029(1X) 0.18 (6X) 0.021 (IX)
These data demonstrate that the presence of AAG and HAS in physiologically excessive amounts does not adversely affect the antiviral activity of compound 32. From these data, the affinity of compound 32 for human AAG and HSA is predicted to be actually lower than that for amprenavir, a known drug. From these data, the compounds of the present invention are expected to have excellent in vivo efficacy in humans, and maintain therapeutically significant levels over prolonged periods of time. Example 18
This example describes the inhibitory activity of compounds 35 (Fig. 5A) , 36 (Fig. 5B) , 37 (Fig. 5C) and 38 (Fig. 5D) . In accordance with the technique disclosed in Example 13 above, the inhibitory activity of these compounds was tested against proteases of the wild-type HIV-1. Compound 36, 37 and 38 were also tested against proteases containing the deleterious drug resistance associated mutations V82F/I84V and G48V/V82A. The results of these experiments are shown below in Table 7.
Table 7
COMPOUND ENZYME K, (pM) Kx t Ki mut
35 WT 81 1
36 WT 5<
V82F/I84V 24.4 >4.9
G 8V/V82A 15.3 >3.0
37 WT 12 1
V82F/I84V 25.7 2.1
G48V/V82A 64 5.3
38 WT >5
V82F/I84V 66.8 >13
G84V/V82A 34 > 6.8
These results further demonstrate compounds of the present invention that are potent inhibitors against mutant proteases.
Example 19
This example further demonstrates the broad-spectrum and potent activity of exemplary compounds of the present invention against multidrug-resistant clinical isolates.
The IC50 values (μM) for all compounds 32, 35, 36, 37, and 38 were determined with respect to wild type clinical isolates HIV-l^j and HIV-lBaL. The latter is a monocytotropic strain of HIV. The IC50's for isolates
Figure imgf000063_0001
were determined by exposing the PHA-simulated PBMC to HIV-1 (50 TCID50 dose/lXlO6 PBMC) , in the precence of various concentrations of compounds 32, 35, 36, 37 and 38, and using the inhibition of p24 Gag protein production as an endpoint on day 7 of culture ("p24 assay"). All drug sensitivities were performed in triplicate. The IC50's for isolate HIV-l^ were also determined by exposing MT-2 cells (2xl03) to 100 TCID50s of HIV-1^ cultured in the presence of various concentrations of compounds 32, 35, 36, 37 and 38. The IC50's were determined using the MTT assay on day 7 of culture. All sensitivities were determined in duplicate. The results are shown below in Table 8.
Table 8
Virus Cell Type Com . 32 Com . 35 Com . 36 Comp . 37 Comp . 38
/Assay IC50(μM) IC50(μM) IC50(μM) IC5„(μM) IC50(μM)
HIV-lωI MT-2 /MTT 0.00022 0.028 0.017 0.0053 0.028
HIV-1^ PBMC/p24 0.00022 0.020 0.034 0.0027 0.0080
HIV-lBa_L PBMC/p24 0.00033 0.013 0.038 0.0030 0.0093
These results demonstrate the potent antiretroviral activity of particular compounds of the present invention.
Example 20 This example further illustrates the potent and broad- spectrum multidrug-resistant antiretroviral activity of an exemplary compound of the present invention.
Compound 32, shown in Figure 3A, was tested against various mutant multidrug-resistant HIV-1 strains clinically isolated from patients. These isolates were all taken from patients who failed therapy on one or more HIV protease inhibitors due to high level clinical resistance. All of these isolates exhibit high level phenotypic resistance in antiviral assays against many of the commonly use HIV protease inhibitor drugs. Compound 32 was tested against these multidrug-resistant clinical isolates side-by-side with known drugs that are commonly used in HIV antiviral therapy, including reverse transcriptase inhibitors such as AZT, 3TC, DDI, DDC, and D4T, and protease inhibitors such as Indinavir (Ind.), Nelfinavir (Nel . ) , Ritonavir (Rit.), and Saquinavir (Saq.). The IC50's for compound 32 and the comparative drugs against the multidrug-resistant HIV-1 clinical isolates, and against wild-type HIV-1 (WT) , are shown in Table 9a.
The mutant multidrug-resistant HIV-1 strains corresponding to each patient, numbered 9-35, were genetically analyzed in terms of the nucleic acid sequences of the protease (PR) and a portion of the reverse transcriptase (RT) genes from which mutations in these enzymes were determined. The mutations in the protease and reverse transcriptase of the multidrug- resistant viruses isolated from each patient are shown below in Table 9b.
Figure imgf000065_0001
Table 9b
Isolate Mutations
PR V003I L010I S037N R041K G048V I054S I062V L063S 1064L 1064L A071V V082A 1093L
RT P004S V0601 V0901 E122K I135V Q174K Y181C E194E/K G196E R211K L214F V245M R227K
E297R L301L/I
PR V003I L010I S037N R041K G048V I054S I062V 063S 1064 1064 A071V V082A 1093L
RT P004S V0601 V0901 E122K I135V T165A/T Q174K Y181C E194K G196E R211K L214F H221H/Y
V245M R277K
PR V003I L010I 1015V M036I S037N R041K L063T I093 RT K020R/K M041L K043Q E044D V060I D067N T069D E122E/K D123E Y181C/Y M184V G196E H208Y L210 R211K 2 PR V003I 010I 1015V K020R M036I S037N R041K G048V I054T/I L063T A071V T074A V082A/V
1093
RT M041 K043Q E044D V060I D067N T069D L074L/I K103N D123E I135T Y181C G196E H208Y
L201 R211K 3 PR V0031 L010I 1015V K020R/K M036I S037N R041K G048V/G I054T/I Q058E/Q Q061R/Q L063T A071A/V
1072T/I T074A/T V082A I093
RT M041L K043Q E044D V060I D067N T069D 074 /I K103N D123E I135T/I Y181C G196E H208Y
L210W R211K
(Table 9b con' t. )
PR V003I L010I K020R E035D M036I S037D R041K G048V 063C A071V 1072T V082A/V 1093L
RT 041L T069T/N 074L/V E122K D123E Y181C Q207E L210 R211K L214F T215Y L228R E248D
R277K E297K
PR V003I L010I E035D R041K 063P A071A/V I072V/I G073R/C V077I 1084V 090M 1093L
RT D067N T069D I142V E169D Y181C M184V Q207B R211K 214F T215Y D250E P272A Q278E
L283I I293V
PR V003I L010I 1013V E035D S037A R041K L063P A071V G073S I084V L090M
RT K020R M041 K043N D067N D123N D177E I178M/I M184V G196E E203D L214F K219Q
R277K G333E
PR V003I 01OI 1013V E035D S037A R041K L063P A071V G073G/S I084V L090
RT K020R M041L K043N D067N D123N D177E I178M/I M184V G196E E203D L214F T215Y R277K
G333E A360T
PR V003I L010V K043T A071V
RT K020R V035M K064H D067G T069N K070R K102R/K V1118I E122K I135T S162A M184V T215S
D128E K219Q
PR V003I L010I 0191 S037Q M046L I054V R057K L063P A071V V082A 090M
RT K020R T058N A062V S068G T069T/I V075I F077 A098S K103N F116Y I135T I142M Q151M
Y181C M184V
(table 9B con' t. )
PR V003I 010I T012P K014R I015V/I G016E S037N M046I I054V K055R I062V L063N A071T V077I V082A I085V L090M
RT K020R V0351 T039A M041L K043E E044A D067N V075A K103N V118I I135M Y181C H208Y L210W R211K
PR V003I L010I 1015V K020R E035D M036I S037K R041N K043T/K M041I L063P H069K A071V T074S V082F N088E L084M L090M I093L
RT K020R V035T T039R M041L K043E E044D V060I I063M/I D067N T069D A098G V118I D121H I135T/I I142V
PR V003I L010I E034E/Q S037H M046I I054V I062V L063S V082A L089L/M RT K020R/K T039A/T M041L K043E E044D D067N V118I M184V E203E/K Q207E H208Y L210W R211K
L214F T215Y
PR V003I LOIOI 1015V K020I L024I M036I S037N I054V R057K L063P A071V V082A
RT K011R D067N K070R I135T Y181V/D M184V D218E/D K219Q P272A R277K R284R/K I293V E297V M357T/M G359G/S
PR V003I I015V D030N E035D S037D L063P V077I N088D RT K064R E122K D123E D177E M184V G196R R211G L214F V245T/M E297A I326V I329L T338S N348I R358K
PR V003I K020I T026T/I S037N M046I L063P A071V G073S V077I I084V L090 I093L RT V035M D067N T069D K070R E122P D177E M184V I202V Q207E R211K L214F T215F K219Q E224K R277K
(Table 9b con't.) 6 PR V003I LOIOI S037N R041K G048V I054S I062V L063S I064L A071V V082A I093L
RT P004S V060I V090I E122K I135Y T135A/T Q174K Y181C E194K G196E R211K L214F H221H/Y
V245M R277K 7 PR V003I LOIOI I015V K020R M036I S037N R041K G048V I054T/I L063T A071A/V T074A V082A
I093L
RT M041L K043Q E044D V060I D067N T069D L074L/I K103N F116F/L D123E I135T Y181C G196E
H208Y L210 8 PR V003I LOIOI I015V M036I S037D G048V I054V D060E Q061E I062V I064V A071V V082A
L090M I093L
RT P004S 041L D067N T069D K070R V090I K103N I135T S162A V179I Y181C G196E Q207E
L214F T215F 9 PR V003I LOIOI K020I S037N M046M/I L063P I072I/K G073C V077I L090M
RT V035I T039A/E M041L E044D L074L/V R083K K102Q S162C I178L E203K H208Y L210 R211K
L214F T215Y PR V003I LOIOI E035D R041K L063P A071A/V I072V/I G073G/S V0771 I084V/I L090M I093L
RT D067N T069D I142V E169D Y181C M184V Q207E R211K L214F T215Y D250E P272A Q278E
L283I I293V
Figure imgf000069_0001
(Table 9b con' . ) 1 PR V003I L010L/I E035D M036M/I S037N M046X I054V L063P I066F A071V V082A/T I084V/I
Figure imgf000070_0001
RT K032R/K K064R D067N K070R K103N/K E122K Y181F/C M184V R211K L214F D218E K219Q E248D
T286A I293V 2 PR V003I LOIOI S037N G048V I054V I062V/I L063P A071A/T V077I V082A I093L
RT K020R M041L D123N I178L M184V T200A/T E203D Q207E L210L/W L214F T215Y R277K T286A
Q334L/Q T338S/T
PR V003I LOIOI E035D M036I S037D D060E L063P I084V L090M RT M041L/M D067N T063T/N K070R D177D/E M184V I202V Q207E L210 R211K L214F T215Y K219Q
V245T P272A PR V003I L010V S037N K043T I054V L063P A071V V082A L090M
RT K020R V035M K064H D067G T069N K070R K102R/K V1181I E122K I135T S162A M184V T215S
D218E K219Q PR V003I LOIOI L019I S037Q M046L I054V R057K L063P A071V V082A L090M
RT K020R T058N A062V S068G T069T/I V075I F077L A098S K1Q3N F116Y I135T I142M Q151M
Y181C M184V
The results of this experiment further show the effectiveness of an exemplary compound of the present invention against a wide range of viral mutants compared to other well- known inhibitors . These mutant viruses represent a panel of the most broadly cross resistant clinical isolates known to date based on their resistance to therapeutically used HIV protease inhibitors. Compound 32 was consistently potent against all of the clinically isolated mutant viruses tested, and was significantly more potent against these multidrug resistant viruses than the comparative drugs which are currently used in human HIV-1 therapy. Compound 32 was ten to one-thousand times more potent against these multidrug resistant viruses than even saquinavir, one of the most potent known compounds against multidrug-resistant HIV-1.
All of the references cited herein, including patents, patent applications, and publications, are hereby incorporated in their entireties by reference. While this invention has been described with an emphasis upon preferred embodiments, it will be obvious to those of ordinary skill in the art that variations of the preferred embodiments may be used and that it is intended that the invention may be practiced otherwise than as specifically described herein. Accordingly, this invention includes all modifications encompassed within the spirit and scope of the invention as defined by the following claims.

Claims

WHAT IS CLAIMED IS:
1. A compound represented by the formula :
Figure imgf000072_0001
(I), or a pharmaceutically acceptable salt, a prodrug, or an ester thereof, wherein:
A is a group of the formula:
Figure imgf000072_0002
R1 is H or an alkyl, an alkenyl, an alkynyl, a cycloalkyl, a cycloalkylalkyl, an aryl, an aralkyl, a heterocycloalkyl, a heterocycloalkylalkyl, a heteroaryl, or a heteroaralkyl, in which at least one hydrogen atom is optionally substituted with a substituent selected from the group consisting of OR7, SR7, CN, N02, N3, and a halogen, wherein R7 is H, an unsubstituted alkyl, an unsubstituted alkenyl, or an unsubstituted alkynyl;
Y and Z are the same or different and are independently selected from the group consisting of CH2, 0, S, SO, S02, NR8, R8C(0)N, R8C(S)N, R80C(0)N, R80C(S)N, R8SC(0)N, R8R9NC(0)N, and R8R9NC(S)N, wherein R8 and R9 are each selected from the group consisting of H, an unsubstituted alkyl, an unsubstituted alkenyl, and an unsubstituted alkynyl; n is an integer from 1 to 5; X is a covalent bond, CHR10, CHR10CH2, CH2CHR10, 0, NR10, or S, wherein R10 is H, an unsubstituted alkyl, an unsubstituted alkenyl, or an unsubstituted alkynyl; Q is C(0) , C(S) , or S02; R2 is H, a
Figure imgf000073_0001
alkyl, a C2-C6 alkenyl, or a C2-C6 alkynyl; m is an integer from 0 to 6;
R3 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl in which at least one hydrogen atom is optionally substituted with a substituent selected from the group consisting of alkyl, (CH pR11, OR12, SR12, CN, N3, N02, NR12R13, C(0)R12, C(S)R12, C02R12, C(0)SR12, C(0)NR1R13, C(S)NR12R13, NR12C(0)R13, NR12C(S)R13, NR12C02R13, NR12C (O) SR13, and a halogen, wherein: p is an integer from 0 to 5; R11 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl in which at least one hydrogen atom is optionally substituted with a substituent selected from the group consisting of a halogen, OH, 0CH3, NH2, N02, SH, and CN; and
R12 and R13 are independently selected from the group consisting of H, an unsubstituted alkyl, an unsubstituted alkenyl, and an unsubstituted alkynyl; R4 is OH, =0 (keto) , NH2, or NHCH3;
R5 is H, a C-L-Cg alkyl radical, a C2-C6 alkenyl radical, or (CH gR14, wherein q is an integer form 0 to 5, and R14 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl radical in which at least one hydrogen atom is optionally substituted with a substituent selected from the group consisting of a halogen, OH, 0CH3, NH2, N02, SH, and CN; W is C(0), C(S), or S02; and R6 is a cycloalkyl, heterocycloalkyl, aryl, or heteroaryl radical in which at least one hydrogen atom is optionally substituted with a substituent selected from the group consisting of a halogen, OR15, SR15, S(0)R15, S02R15, S02NR15R16, S02N(OH)R15, CN, CR15=NR16, CR15=N (OR16) , N3, N02, NR15R16, N(OH)R15, C(0)R15, C(S)R15, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, C(0)N(OH)R15, C(S)N(0H)R15, NR15C(0)R16, NR15C(S)R16, N (OH) C (0) R15, N(0H)C(S)R15, NR15C02R16, N(OH)C02R15, NR15C (0) SR16, NR15C (0) NR16R17, NR1SC(S)NR16R17, N(0H)C(0)NR15R1S, N(OH) C (S) NR15R16, NR15C (O) N(OH) R16, NR15C(S)N(OH)R16, NR15S02R16, NHS02NR15R16 , NR15S02NHR16 , P(0) (OR15) (OR16) , an alkyl, an alkoxy, an alkylthio, an alkylamino, a cycloalkyl, a cycloalkylalkyl, a heterocycloalkyl, a heterocycloalkylalkyl, an aryl, an aryloxy, an arylamino, an arylthio, an aralkyl, an aryloxyalkyl, an arylaminoalkyl, an aralkoxy, an (aryloxy) alkoxy, an (arylamino) alkoxy, an (arylthio) alkoxy, an aralkylamino, an (aryloxy) alkylamino, an (arylamino) alkylamino, an (arylthio) alkylamino, an aralkylthio, an (aryloxy) alkylthio, an (arylamino) alkylthio, an
(arylthio) alkylthio, a heteroaryl, a heteroaryloxy, a heteroarylamino, a heteroarylthio, a heteroaralkyl, a heteroaralkoxy, a heteroaralkylamino, and a heteroaralkylthio, wherein R15, R16, and R17 are H, an unsubstituted alkyl, or an unsubstituted alkenyl, wherein, when at least one hydrogen atom of R6 is substituted with a substituent other than a halogen, OR15, SR15, CN, N3, N02, NR15R16, C(0)R15, C(S)R15, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, NR15C(0)R16, NR15C(S)R16, NR15C02R16, NR15C (0) SR16, NR15C(0)NR16R17, or NR15C ( S ) NR16R17 , at least one hydrogen atom on said substituent is optionally substituted with a halogen, OR15, SR15, CN, N3, N02, NR15R16, C(0)R15, C(S)R15, C02R15, C(0)SR15, C(0)NR15R16, C(S)NR15R16, NR15C(0)R15, NR15C(S)R1S, NR15C02R16, NR15C(0)SR16, NR15C(0)NR16R17, or NR15C (S) NR16R17; or R5 and R6 together comprise a 12 to 18 membered ring comprising at least one additional heteroatom in the ring skeleton which includes the N-W bond of formula (I) ; and wherein, said compound inhibits a multidrug-resistant retroviral protease .
2. The compound of claim 1, wherein A is a group of the formula :
Figure imgf000075_0001
3. The method of claim 1 or 2 , wherein: when R1 is an alkyl, it is a C1-C6 alkyl; when R1 is an alkenyl it is a C2-C6 alkenyl; when R1 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl, R1 is a 4-7 membered ring; when R7, R8 or R9 is an unsubstituted alkyl, it is a Cx-C6 unsubstituted alkyl; when R7, R8 or R9 is an unsubstituted alkenyl, it is a C2-C6 unsubstituted alkenyl;
R3 is a 4-7 membered ring; R11 is a 4-7 membered ring; when R12 or R13 is an unsubstituted alkyl, it is a
Figure imgf000075_0002
unsubstituted alkyl; when R12 or R13 is an unsubstituted alkenyl, it is a C2-C6 unsubstituted alkyl; when R14 is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl, R14 is a 4-7 membered ring; when R6 is a cycloalkyl, a heterocycloalkyl, aryl, or a heteroaryl, R6 is a 4-7 membered ring; when R6 is substituted with a substituent that is an alkyl, an alkylthio, or an alkylamino, the substituent comprises from one to six carbon atoms; and when R6 is substituted with a substituent that is a cycloalkyl, a heterocycloalkyl, an aryl, or a heteroaryl, the substituent is a 4-7 membered ring; or a pharmaceutically acceptable salt, a prodrug, or an ester thereof .
4. The compound of claim 1 or 2 , wherein Q is C(O), R2 is H, and W is S02, or a pharmaceutically acceptable salt, a prodrug, or an ester thereof.
The compound of claim 2 represented by the formula :
Figure imgf000076_0001
Figure imgf000076_0002
6. The compound of claim 5 represented by the formula:
Figure imgf000077_0001
(IC) or
Figure imgf000077_0002
(ID), wherein Ar is a phenyl which is optionally substituted with a substituent selected from the group consisting of methyl, amino, hydroxy, methoxy, methylthio, hydroxymethyl, aminomethyl, and methoxymethyl .
7. The compound of claim 6 represented by the formula:
Figure imgf000077_0003
(IE) or
Figure imgf000078_0001
(IF) .
8. The compound of claim 6 or 7, wherein X is oxygen.
9. The compound of claim 6 or 7, wherein R5 is isobutyl .
10. The compound of any one of claims 6 or 7, wherein Ar is phenyl substituted at the para-position.
11. The compound of any one of claims 6 or 7, wherein Ar is a phenyl substituted at the meta-position.
12. The compound of claim 6 or 7, wherein Ar is a phenyl substituted at the ortho-position.
13. The compound of any one of claims 6 or 7, wherein Ar is selected from the group consisting of para-aminophenyl, para- toluyl, para-methoxyphenyl, meta-methoxyphenyl, and meta- hydroxymethylphenyl .
14. A pharmaceutical composition which comprises a multidrug-resistant, retroviral protease-inhibiting amount of a compound of any one of claims 1,2, or 5-7 and a pharmaceutically acceptable carrier.
15. The pharmaceutical composition of claim 14, wherein said multidrug-resistant, retroviral protease-inhibiting amount is a multidrug-resistant, HIV protease-inhibiting amount.
16. The pharmaceutical composition of claim 15, wherein multidrug-resistant, HIV protease-inhibiting amount is a multidrug-resistant, HIV-1 protease-inhibiting amount.
17. A method of inhibiting the protease of a multidrug- resistant retrovirus in a mammal infected with a protease- producing, multidrug-resistant retrovirus, which method comprises administering to said mammal a multidrug-resistant, retroviral protease-inhibiting effective amount of a compound of any one of claims 1, 2, or 5-7, so as to inhibit the proliferation of said retrovirus in said mammal.
18. A method of treating a multidrug-resistant retroviral infection in a mammal, which method comprises administering to said mammal a multidrug-resistant, retroviral protease- inhibiting effective amount of a compound of any one of claims 1, 2, or 5-7.
19. The method of claim 17, wherein said multidrug- resistant, retroviral protease-inhibiting amount is a multidrug- resistant, HIV protease-inhibiting amount.
20. The method of claim 18, wherein said multidrug- resistant, retroviral protease-inhibiting amount is a multidrug- resistant, HIV protease-inhibiting amount.
21. The method of claim 19 or 20, wherein said multidrug- resistant, HIV protease-inhibiting amount is a multidrug- resistant, HIV-1 protease-inhibiting amount.
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