WO1996040781A1 - CYCLIC PEPTIDE INHIBITORS OF β1 AND β2 INTEGRIN-MEDIATED ADHESION - Google Patents

CYCLIC PEPTIDE INHIBITORS OF β1 AND β2 INTEGRIN-MEDIATED ADHESION Download PDF

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WO1996040781A1
WO1996040781A1 PCT/US1996/010186 US9610186W WO9640781A1 WO 1996040781 A1 WO1996040781 A1 WO 1996040781A1 US 9610186 W US9610186 W US 9610186W WO 9640781 A1 WO9640781 A1 WO 9640781A1
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group
cys
compound
asp
fca
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PCT/US1996/010186
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French (fr)
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Thomas J. Lobl
Shiu-Lan Chiang
Wolfgang Scholz
Nancy Delaet
Pina Cardarelli
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Tanabe Seiyaku Co., Ltd.
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Priority to AU63321/96A priority Critical patent/AU6332196A/en
Priority to US08/738,838 priority patent/US5821329A/en
Priority claimed from US08/738,838 external-priority patent/US5821329A/en
Publication of WO1996040781A1 publication Critical patent/WO1996040781A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K7/00Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
    • C07K7/02Linear peptides containing at least one abnormal peptide link
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/78Connective tissue peptides, e.g. collagen, elastin, laminin, fibronectin, vitronectin, cold insoluble globulin [CIG]
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides

Definitions

  • the present invention relates to novel cyclic peptides and peptidomimetic compounds which are characterized by cell adhesion modulation activity.
  • Vascular endothelial cells form the interface between blood and tissues and control the passage of leukocytes as well as plasma fluid into tissues.
  • a variety of signals generated at the site of inflammation can activate both endothelial cells as well as circulating leukocytes so that they become more adhesive to one another.
  • Activation of endothelium and leukocytes initiates a complex adhesion cascade.
  • This adhesion cascade involves the "tethering" of the leukocytes to the endothelium, after which they "roll” along the endothelial surface and finally strongly adhere and migrate into tissue to perform host defense functions.
  • integrins Several adhesion molecules, belonging to a super gene family consisting of non-covalently associated heterodimeric proteins called integrins, have been identified as being involved in leukocyte- endothelial cell interactions.
  • the ⁇ 2 integrin subfamily includes LFA-1 (CDlla/CD18) , Mac-1 (CDllb/CD18, CR3) and pl50/95 (CDllc/CD18, CR4) .
  • LFA-1 CDlla/CD18
  • Mac-1 CDllb/CD18, CR3
  • pl50/95 CDllc/CD18, CR4
  • the known ligands for LFA-1 are ICAM-1, ICAM-2 and ICAM-3.
  • the Intracellular Adhesion Molecules (ICAM) are members of the Ig gene superfamily.
  • ICAM-1 is the most ubiquitous of the ICAMs, being expressed in low levels on most peripheral blood leukocytes as well as endothelial cells, fibroblasts and dendritic cells. Cytokine activation of endothelial cells induces a dramatic increase in the expression of ICAM-1 and LFA-l/lCAM-1 interactions which are integral to both lymphocyte adhesion and transmigration through the endothelial barrier; Dustin, M. . et al, J. Immunol. , 137, 245-254 (1986) . ICAM-2 is primarily constitutively expressed on endothelial cells; de Fougerolles, A.R. et al, J. EXP. Med..
  • ICAM-3 is largely found on resting lymphocytes, monocytes and neutrophils; and shows increased expression upon T cell activation; de Fougerolles, A.R. and Springer, T.A. , J. EXP. Med.. 175. 185-190 (1992) .
  • ICAM-1 In addition to its critical role in mediating cellular adhesion, ICAM-1 has also been shown to act as a receptor for a subgroup of rhinoviruses known as the major groups, and soluble ICAM-1 has been shown to act as specific inhibitor of rhinovirus infection; Martin, S.D. et al, Nature. 344. 70-72 (1990) .
  • a compound which blocks the interaction of rhinovirus with ICAM-1 may be a powerful pharmacological agent for the prevention and treatment of colds and secondary complications arising from rhinovirus infection.
  • ⁇ integrin subfamily include a ⁇ i > oe 2 ⁇ l l a 2 ⁇ l t a ⁇ ⁇ (V A-4, CD49d/CD29) , ot ⁇ ⁇ , ot 5 ⁇ 1 (V A-5, CD49e/CD29) , a 6 ⁇ l t a e ⁇ ⁇ and v ⁇ ⁇ (CD51/CD29) .
  • a ⁇ binds to both fibronectin and the cytokine inducible molecule on endothelial cells termed vascular cell adhesion molecule (VCAM) . interaction has been shown to be involved with lymphocyte extravasation at sites of chronic inflammation; Elices, -M.J. et al, Cell. 6>fJ, 577- 584 (1990) .
  • MadCAM macosal addressin cell adhesion molecule
  • ⁇ 2 integrins and ICAM have been shown to have important roles in graft rejection, ischemia reperfusion, delayed type hypersensitivity, asthma and allergies, inflammatory bowel disease, rheumatoid arthritis and AIDS.
  • Support for the importance of ⁇ 2 integrins in mediating inflammatory responses has been demonstrated by the ability of monoclonal antibodies which recognize LFA-1 to block CTL-mediated lysis of target cells, as well as inhibit proliferation of T cells in response to soluble antigens, alloantigens and mitogen.
  • Several in vivo models have demonstrated the importance of ⁇ 2 integrins in delayed-type hypersensitivity.
  • Anti-LFA-1 antibodies have been shown to block the migration of spleen T cells to sites of dermal inflammation, as well as the homing of lymph node and spleen T cells to peripheral and mesenteric lymph node in rats; Issekutz, T.B., J. Immunol.. 149. 3394- 3402 (1992) .
  • Both anti-LFA-1 and anti-ICAM-1 antibodies can reduce ear swelling caused by edema and cell infiltration in association with delayed-type hypersensitivity; Scheynius, A. et al, J. Immunol.. 150. 655-663 (1993) .
  • Anti-ICAM-1 antibodies have also been shown to attenuate airway eosinophilia, hyperresponsiveness and asthma symptoms in a primate asthma model.
  • One objective of the present invention is to provide compounds which act to modulate cell adhesion. These compounds are represented by the formula (I) :
  • L 1 is a residue of an amino acid or an amino acid mimetic, having a functional group suitable for the formation of a cyclizing bridge, Z, between L 1 and L 2 .
  • L 2 is a residue of an amino acid or an amino acid mimetic, having a functional group suitable for the formation of a cyclizing bridge, Z, between L 1 and L 2 .
  • Z is a cyclizing moiety or bond between L 1 and L 2 ;
  • is a residue of an amino acid or an amino acid mimetic and r is an integer of 0 or 1.
  • X 1 is a residue of an amino acid or an amino acid mimetic and m is an integer of 0, 1 or 2.
  • X 2 is jS-Asp or ⁇ -Glu or an ester or an amide derivative formed from the -carboxyl group of any of the aforementioned groups.
  • X 3 is Ser(R 4 ), Thr(R 4 ), Tyr(R 4 ), Ala, Gly, Lys(R 4 ), Orn(R 4 ), Dpr(R 4 ), N-Me-Ala, Aib, Val, Tic, o- or m- halo-Tyr, dihalo-Tyr, p-halo- Phe, dihalo-Phe, Sar, Leu, lie, Nle or Cys(R 4 ) wherein when X 3 is Ser(R 4 ), Thr(R 4 ) or Tyr(R 4 ), then R 4 is a substituent of the side chain hydroxyl group of X 3 and is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, a cycloal
  • q is an integer of 0 or 1.
  • X 5 is a residue of an amino acid or an amino acid mimetic, n is an integer of 0, 1, 2 or 3.
  • X 6 is a residue of an amino acid or an amino acid mimetic, s is an integer of 0 or 1.
  • R 1 is a hydrogen atom, Xan, Fmoc, 9-FAc, 9-FCA, 1- FCA, Ac, 2-NaphAc, Ada, 5-Fine, biotinyl, Su, 1-NaphCA, For, 1-NaphAc, PhAc, l-NaphS0 2 , 2-NaphS0 2 or 2-NaphCA, with the proviso that the compound (Fmoc) -Arg-Cys*- ( ⁇ - Asp) - (ThioP) -Cys* is not included.
  • the present invention includes compounds having an IC 50 of less than about 500 ⁇ M as established in JY-Endothelial cell and Jurkat-Endothelial cell adhesion assays; in another regard, the invention includes compounds having an IC 50 of less than about 100 ⁇ M in such assays.
  • the invention also includes methods for obtaining (either in vi tro or in vivo) , such integrin receptor adhesion inhibition.
  • the compounds of the present invention accomplish strong inhibition, at low concentrations, with an IC 50 of less than about 500 ⁇ M, or alternatively less than about 100 ⁇ M.
  • the present invention includes compounds having an IC 50 of less than about 200 ⁇ M as established in Jurkat-endothelial cell and JY-endothelial cell adhesion assays. Compounds with activity below 100 ⁇ M are most preferred, below 150 ⁇ M are preferred, below 500 ⁇ M are less preferred and above 500 ⁇ M least preferred.
  • the invention also includes methods for obtaining (either in vitro o ⁇ in vivo) such leukocyte receptor adhesion inhibition.
  • the compounds of the present invention accomplish strong inhibition at low concentrations, with an IC 50 of less than about 250 ⁇ M.
  • Another objective of the present invention is to provide compounds, pharmaceutical compositions, and methods which may be used in the study, diagnosis, treatment or prevention of diseases and conditions which involve or relate to cell adhesion.
  • Another objective of the present invention is to provide compounds, pharmaceutical compositions and methods of treatment which may be used to inhibit inflammatory diseases in humans.
  • Another objective is to provide antibodies made by using the compounds of the invention, such as, but not limited to, antibodies to the compounds and anti- idiotype antibodies to the antibodies disclosed in order to study, diagnose, treat or prevent the above mentioned diseases and conditions which relate to cell adhesion.
  • Another objective of the present invention is to provide a matrix which can be used to purify proteins, polysaccharides or other compounds which specifically bind to the cyclic peptides of the present invention with high affinity.
  • the present invention relates to compounds meeting one or more of the above objectives.
  • the compounds have activity as cell adhesion modulators.
  • the novel compounds have been found to modulate cell adhesion by competing, for example, with integrin specific ligands, such as but not limited to, ICAM-1 and VCAM, which are sufficiently inhibited from binding to the leukocyte receptors so as to prevent or reduce cell-cell adhesion.
  • integrin specific ligands such as but not limited to, ICAM-1 and VCAM
  • Other uses for the compounds include enhancing cell adhesion to a distinct surface. These useful compounds can function as both cell-adhesion agonists and antagonists.
  • Cell adhesion is required for certain normal physiological functions. Yet, there are situations in which cell adhesion is undesirable, or in which modulated cell adhesion is desirable. Many pathologies exist which are related to abnormal cellular adhesion. These include, but are not limited to, rheumatoid arthritis, asthma and allergies, adult respiratory distress syndrome (ARDS) , AIDS, cardiovascular disease thrombosis or harmful platelet aggregation, reocclusion following thrombolysis, allograft rejection, reperfusion injury, psoriasis, eczema, contact dermatitis and other skin inflammatory diseases, osteoporosis, osteoarthritis, atherosclerosis, neoplastic disease including metastasis of neoplastic or cancerous growth, treatment of certain eye diseases such as detaching retina, Type I diabetes, multiple sclerosis, systemic lupus erythematosus (SLE) , inflammatory and immunoinflammatory conditions including ophthalmic inflammatory conditions and inflammatory bowel disease (
  • a peptide or other compound with suitable affinity for integrin receptors when attached, for example, to a suitably positioned matrix or surface, may be able to promote beneficial cell adhesion and resultant enhancement of wound healing.
  • ICAM and VCAM expression can be seen at post-capillary venuole sites. This increased expression has been suggested to play a role in increased risk of arterial blockage from increased cellular adhesion at these sites. Compounds which effect ICAM and VCAM interactions with integrins should be useful in treatment of this type of arterial blockage.
  • Anti-ICAM antibodies are immunosuppressive in monkeys and aid in preventing graft rejection (Wee et al. Trans. Proc.. 23. 279 (1991)) .
  • Compounds, such as the ones encompassed by this invention are expected to be useful as immunosuppressives for preventing graft rejection. They should also have the advantage over antibodies of being less antigenic in vivo because of their small size and structural design.
  • cell adhesion modulation compounds of the present invention are represented in part by amino acid sequence formulas wherein the individual amino acids are represented by their standard three-letter abbreviations, or alternatively, they are represented by one-letter abbreviations as indicated in the following Table of Abbreviations. Table of Abbreviations
  • Amino acids of the peptide backbone are delineated with hyphens; synthetic amino acids, unnatural amino acids, and amino acid mimetics are enclosed in parentheses; the R 1 -R 5 groups which are attached to the backbone amino acid groups are enclosed in parentheses and are immediately adjacent to the amino acid to which they are attached without an intervening hyphen. Additional abbreviations used herein include the following:
  • Aib ⁇ -aminoisobutyric acid j ⁇ -Ala: j ⁇ -alanine (3-aminopropionic acid) jS-Asp: j ⁇ -aspartic acid
  • BCECF-AM 2' ,7'-bis- (2-carboxyethyl) -5- (and -6)- carboxyfluorescein, acetoxymethyl ester, Molecular Probes Cat. No. B-1170
  • BSA bovine serum albumin Cha: 3-Cyclohexyl-2-aminopropionic acid
  • CTL cytotoxic T-lymphocyte
  • DCM dichloromethane
  • DIEA diisopropylethylamine
  • Fmoc 9-Fluorenylmethoxycarbonyl FN: fibronectin
  • HSA human serum albumin
  • HUVEC human umbilical vein endothelial cell
  • ICAM intercellular adhesion molecule
  • IC 50 inhibitory concentration, concentration at which adhesion is inhibited to 50% of control level
  • IL-1 interleukin 1
  • LFA-1 Lymphocyte Functional Antigen-1
  • 2-NaphCA 2-Naphthalenecarbonyl l-NaphS0 2 : 1-Naphthalenesulfonyl
  • PBS phosphate buffered saline
  • Pen penicillamine
  • PhAc Phenylacetyl
  • R.T. room temperature (about 24°C)
  • rTNF recombinant Tumor Necrosis Factor
  • Thr(OMe) O-methylthreonine
  • Tic l,2,3,4-tetrahydroisoquinoline-3- carboxylic acid
  • TNF Tumor Necrosis Factor
  • TTC Tetrahydro-1,3-thiazine-4-carboxylic acid
  • Tyr(OMe) O-methyltyrosine
  • VCAM vascular cell adhesion molecule
  • VLA very late activation antigens
  • R 1 is a substituent on the - amino terminal group of the N-terminal amino acid.
  • R 1 is preferably a hydrogen atom, Ada, 1- or 2-NaphAc, 1- NaphS0 2 , 2-NaphS0 2 , 1-NaphCA, 2-NaphCA, 9-FAc, 1-FCA, 9-
  • FCA Chloroc
  • PhAc PhAc
  • Ac PhAc
  • Fmoc Fmoc
  • Xan 5-Fine
  • biotinyl Su and For.
  • is an optional group, r is an integer of 0 or 1, and when present, X° is preferably
  • Trp 1-Nal, 2-Nal, or an aromatic or hydrophobic amino acid, such as Tyr, Leu, Nle, He, Val, NorVal and Cha.
  • X 1 is an optional group, "m” is an integer of 0, 1 or 2 and when present, X 1 is preferably a hydrophobic amino acid or a side chain-protected basic amino acid residue having a side chain terminal amino group with the formula -NHR 2 , where R 2 is selected from the group consisting of a hydrogen atom, PhAc, 1-NaphAc, 2-NaphAc, Ada, 2-norbornylacetyl, 1-FCA, CHAc and For.
  • Preferred moieties for X 1 include Arg, Lys(R 2 ), Gly, N ⁇ - Me-Arg, Nle, Cha, Orn(R 2 ) , Val, NorVal, Dpr(R 2 ), Abu, Leu and He.
  • X 2 is selected from D- and L-/3-Asp and D- and L- ⁇ -Glu and ⁇ -carboxyl esters or amides of any of these aforementioned amino acids.
  • the carboxyl peptide linkages of jS-Asp and ⁇ -Glu are formed between the side chain carboxyl groups ( ⁇ -carboxyl or ⁇ - carboxyl) of jS-Asp and ⁇ -Glu, respectively, and the a- amino group of the adjacent amino acid.
  • the ⁇ -carboxyl group of X 2 may have the formula -C(0)R 3 , where R 3 is -OR, -NHR or -NRR and where R is a hydrogen atom, a lower alkyl, an aryl, an arylalkyi, a cycloalkyi, a heteroaryl-lower alkyl or a heterocyclic group as appropriate for an amide or ester. More specifically, R may be methyl, Fm, benzyl, cyclohexyl, 1-adamantyl, 2-, 3- or 4-picolyl, 1- or 2-naphthylmethyl or isobutyl.
  • R 3 is -OR and R is a hydrogen atom, -C(0)OH is present.
  • R 3 is -NHR or -NRR and R is a hydrogen atom, a carboxamide is present. Otherwise, for -NRR each R group may be selected independently of the other R group.
  • X 3 is an optional amino acid residue where "p" is an integer of 0 or 1.
  • preferred amino acids include Ser(R 4 ) , Thr(R 4 ) , Tyr(R 4 ), Ala, Gly, Lys(R 4 ), Orn(R 4 ), Dpr(R 4 ), N-Me-Ala, Aib, Val, Tic, o- and m-halo-Tyr, dihalo-Tyr, p-halo- Phe, dihalo-Phe, Sar, Leu, He, Nle and Cys(R 4 ) .
  • X 4 is an optional amino acid, where "q" is an integer of 0 or 1.
  • preferred amino acids include Pro, ThioP, Aib, Asn, TCA, TTC, Sar, N-Me-Ala, other N-methylated natural amino acids, Tic and pipecolinic acid (homoproline) .
  • X 5 is optional and "n” is an integer of 0, 1, 2 or 3.
  • X 6 is optional and "s" is an integer of 0 or 1.
  • Preferred groups for X 5 and/or X 6 include a side chain-protected derivative of a basic amino acid residue having a side chain terminal amino group with the formula -NHR 4 ; a side chain-protected derivative of an acidic amino acid residue having a side chain terminal carboxyl group with the formula -C(0)R 4 , where R 4 is -OR, -NHR or -NRR; Ser(R 4 ) , Thr(R 4 ) , Tyr(R 4 ) , and R 4 is a substituent of the hydroxyl group; and Cys(R 4 ) and R 4 is a substituent of the sulfhydryl group.
  • X 5 and/or X 6 include Ala; Asp(R 4 ) ; Glu(R 4 ) ; Ser(OMe) ; Thr(OMe) ; Tyr(OMe) ; Gly; Abu; AnC; Leu; Val; ⁇ -Ala; Lys(R 4 ); Dpr(R 4 ); Orn(R 4 ), He and Nle.
  • R 4 is a substituent of a terminal amino group of a side chain of a basic amino acid, of a ⁇ - or ⁇ -carboxylic group of an acidic amino acid, of a side chain hydroxyl group of Ser, Thr, Tyr or of a hydroxyl containing derivative or analog of Ser, Thr or Tyr or of a sulfhydryl group of Cys or of a sulfhydryl containing derivative or analog of Cys .
  • the terminus of the side chain may be represented by the formula -C(0)R 4 and R 4 is -OR, -NHR or -NRR, wherein R may be a hydrogen atom, a lower alkyl, an aryl, an arylalkyi, a cycloalkyi, a heteroaryl-lower alkyl or a heterocyclic group as is appropriate for an amide or ester functional group. More specifically, R may be benzyl, cyclohexyl, 1- or 2- naphthylmethyl, 2-, 3- or 4-picolyl, 1-adamantyl, Fm, isobutyl or methyl.
  • R 4 is -OR and R is H, the side chain terminal functionality -C(0)OH, is present.
  • R 4 is NHR or NRR and R is H, a carboxamide is present.
  • each R group may be selected independently of the other R group.
  • R 4 is a substituent of the hydroxyl group and may be a hydrogen atom, a lower alkyl, a cycloalkyi, a cycloalkyi-lower alkanoyl, an aryl, an arylalkyi, an aryloxycarbonyl, an arylcarbonyl, a heteroaryl-lower alkyl, an arylacetyl, a heterocyclic group, a lower alkanoyl, or an arylalkoxycarbonyl.
  • R 4 may be methyl, benzyl, cyclohexyl, 1- or 2- naphthylmethyl, Fm, 2-, 3- or 4-picolyl or isobutyl. If R 4 is a hydrogen atom, a hydroxyl side chain is present.
  • R 4 When X 3 , X 5 or X 6 is a residue of a basic amino acid, the terminal group of the side chain may be denoted by the formula -NHR 4 .
  • Preferred groups for R 4 include a hydrogen atom, lower alkyl, aryl, aryloxycarbonyl, arylcarbonyl, arylacetyl, an arylalkyi, an arylalkoxycarbonyl, a lower alkanoyl, cycloalkyi, and cycloalkyi-lower alkanoyl. More specifically, R 4 may be cyclohexyl, 1- and 2-naphthylmethyl, Fmoc, 1-FCA, 9-FCA, Ada, Ac and 9-FAc. When R 4 is a hydrogen atom, an amino terminus of the side chain is present.
  • R 4 is a substituent of the sulfhydryl group and is a hydrogen atom, a lower alkyl, an arylalkyi, an aryl, a cycloalkyi, a cycloalkyi-lower alkanoyl, an aryloxycarbonyl, an arylcarbonyl, an acetamido-lower alkyl, an arylacetyl, a heterocyclic group, a lower alkanoyl, or an arylalkoxycarbonyl.
  • R 4 is preferably methyl, benzyl, 1- or 2-naphthylmethyl, cyclohexyl, Fm, Acm, 4-methylbenzyl or Ada.
  • R 4 is preferably not a hydrogen atom; however, where R 4 is a hydrogen atom, a sulfhydryl terminal group of the side chain is present.
  • the ⁇ -carboxyl group may be represented by the formula -C(0)R 5 , where R 5 is -OR, -NHR, or -NRR and R is a hydrogen atom, a lower alkyl, an arylalkyi, an aryl, a cycloalkyi, a heteroaryl-lower alkyl or a heterocyclic group as is appropriate for an amide or ester functional group. More specifically, R may be methyl, Fm, isobutyl, benzyl, cyclohexyl, 1- or 2-naphthylmethyl, 1- adamantyl or 2-, 3- or 4-picolyl.
  • R 5 is -OR and R is H, an ⁇ -carboxyl terminus, -C(0)OH, is present.
  • R 5 is -NHR or -NRR and R is H, a carboxamide is the C- terminus of the peptide.
  • each R group may be selected independently of the other R group.
  • R 1 -R 5 are preferably each independently selected so as to enhance the specific activity of the resulting compound and/or to preserve the compound against metabolism in the in vivo environment and to increase the effective half-life of the compound.
  • the use of one or more groups for X°-X 6 particularly at the N-terminal position or in other regions in the compound, promotes the activity of the compound.
  • a bridge is formed via a cyclizing moiety, Z, between L 1 and L 2 .
  • L 1 and L 2 are each, or together, residues of amino acids or amino acid mimetics having functional groups suitable for the formation of a cyclizing bridge between L 1 and L 2 .
  • L 1 and L 2 are chosen so that each contains a functional group which contributes to the formation of the cyclizing bridge moiety, Z.
  • Z is formed from functional groups contributed by L 1 and L 2 and may also contain additional atoms and spacer groups.
  • preferred functional groups include thiol, amino and carboxyl groups. Such functional groups may be borne on the side chain of amino acids or amino acid mimetics, or may constitute the ⁇ -amino group (in L 1 ) or terminal-carboxyl group (in L 2 ) thereof.
  • L 1 and L 2 are Cys, Cys-NH 2
  • L 1 and L 2 are each selected from Cys or Pen. Both Cys and Pen contain a sulfhydryl group and thus, the bridging cyclization can be accomplished by oxidative coupling of the sulfhydryls to form a disulfide bond between residues L 1 and L 2 .
  • the cyclizing moiety, Z is a covalent bond between the two sulfur atoms. This may be depicted generally for compounds wherein, both L 1 and L 2 are Cys residues as follows:
  • L 1 is Cys and L 2 is Cys.
  • the cyclizing moiety may also be formed by a hydrocarbon moiety, for example a (poly)methylene bridge moiety of the form - (CH 2 ) - where y is an integer from
  • L 1 and L 2 may be chosen from other natural or synthetic, - or D-amino acids or amino acid mimetics which provide a side chain or an amino- or carboxyl-terminus suitable as a functional group, for the formation of a cyclizing moiety.
  • L 2 may be selected from Asp, Glu, or other natural or synthetic amino acids which provide a suitable side chain carboxyl group for cyclic linkage, through formation of an amide bond in a condensation reaction, with an amino group (e.g., an N ⁇ -amino group, or an ⁇ side chain amino group as on, for example, Lys or Orn) on L 1 .
  • the cyclizing moiety Z may be a simple amide bond between L 1 and L 2 .
  • an amino acid residue L 2 may provide an ⁇ - carboxyl group from its carboxyl terminus for amide linkage with either a side chain amino or ⁇ -amino group on L 1 ; the direction of the amide linkage may also be reversed where L 1 provides a side chain carboxyl group and L 2 provides a side chain amino group.
  • the cyclizing bridge between L 1 and L 2 may also be formed via a monosulfide (thioether) linkage, as exemplified below.
  • thioether monosulfide
  • the ⁇ -carboxyl group may be represented as -C(0)R 5 where R 5 is -OR, -NHR or -NRR and R is H, a lower alkyl, an aryl, an arylalkyi, a cycloalkyi, a heteroaryl-lower alkyl or a heterocyclic group as is appropriate for an amide or ester functional group.
  • R may be methyl, benzyl, cyclohexyl, 1- or 2-naphthylmethyl, 1-adamantyl, Fm, 2-, 3- or 4- picolyl or isobutyl.
  • R 5 is -OR and R is H, the ⁇ - carboxyl group, -C(0)OH, is present on L 2 .
  • R 5 is - NHR or -NRR and R is H, the carboxamide is present.
  • each R group in -NRR may be selected independently of the other R group.
  • Synthetic amino acid residues may also be utilized for L 1 or L 2 , as for example, homologues wherein a side chain is lengthened or shortened while still providing the sulfhydryl carboxyl, amino or other reactive functional group for cyclization.
  • the preferable compounds are compounds of the formula (I) wherein L 1 and L 2 are each or together selected from the group consisting of Cys, Cys-NH 2 (only for L 2 and when no X 5 or X 6 groups are present) , Arg (only for L 1 and when X° and X 1 are absent) Pen, Orn, Lys, Dpr, Gly (only for L 1 and when X° and X 1 are absent) , Met, Glu and Asp;
  • Z is selected from a single bond, a lower alkylene or formula: -C0CH 2 -;
  • is selected from the group consisting of Trp, 1- Nal, 2-Nal, Tyr, Leu, Nle, He, Val, NorVal and Cha;
  • X 1 is selected from the group consisting of Lys(R 2 ) , Gly, N ⁇ -Me-Arg, Nle, Cha, Val, NorVal, Dpr(R 2 ), Arg, Orn(R 2 ), Leu, He and Abu;
  • R 2 is selected from a hydrogen atom, Ada, 2- norbornylacetyl, 1-FCA, 1-NaphAc, 2-NaphAc, PhAc, For or CHAc;
  • X 2 is selected from the group consisting of ⁇ -Asp and j ⁇ -Asp(R 3 ), ⁇ -Glu and ⁇ -Glu(R 3 ) and R 3 is -OR, -NHR or -NRR and where R is a hydrogen atom, a lower alkyl, an aryl, an arylalkyi, a cycloalkyi, a heteroaryl-lower alkyl or a heterocyclic group; and
  • X 5 and/or X 6 is selected from the group consisting of Ala; Asp(R 4 ) and Glu(R 4 ) wherein R 4 is a substituent of the derivatized side chain terminal carboxyl group and is selected from the group consisting of -OR, -NRR and -NHR where R is selected from the group consisting of a hydrogen atom, a lower alkyl, an aryl, a cycloalkyi, a heteroaryl-lower alkyl, a heterocyclic group and an arylalkyi; Ser(R 4 ) , Tyr(R 4 ) and Thr(R 4 ) wherein R 4 is OR and R is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, an aryl, an arylalkyi, a cycloalkyi-lower alkanoyl, an aryloxycarbonyl, an arylcarbonyl, a heteroary
  • R 4 is a substituent of the derivatized side chain terminal amino group and is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, a lower alkanoyl, an arylalkyi, an arylalkoxycarbonyl, an aryl, an aryloxycarbonyl, an arylcarbonyl, a cycloalkyi-lower alkanoyl and an arylacetyl; AnC; Leu; Val; He; Nle; ⁇ - Ala and Cys(R 4 ) wherein R 4 is a substituent of the derivatized side chain sulfhydryl group expressed as -SR and R is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, an acetamido-lower alkyl,
  • R 1 is selected from the group consisting of hydrogen, Xan, 9-FAc, 9-FCA, 1-
  • FCA Ac, 2-NaphAc, Ada, 5-Finc, biotinyl, Su, 1-NaphCA, For, 1-NaphAc, PhAc, l-NaphS0 2 , 2-NaphS0 2 and 2-NaphCA.
  • most preferable ones are those wherein p is an integer of 1.
  • R 1 is selected from hydrogen, 1-FCA, 9-FAc, Ada, 5- Finc, Ac, Biotinyl, 9-FCA, Fmoc, For, 1- or 2-NaphAc, PhAc, l-NaphS0 2 , 2-NaphS0 2 , 1- or 2-NaphCA, Xan or Su;
  • is selected from the group consisting of Trp, 1- Nal, 2-Nal, Tyr, Leu, Nle, He, Val, NorVal and Cha;
  • r is an integer of 0 or 1;
  • X 1 is selected from Arg, N ⁇ -Me-Arg, Lys, Lys (Ada) , Lys (1-NaphAC) , Lys (PhAc), Lys(For), Lys (2-NaphAc) , Orn, Orn(PhAc), Gly, Nle or Cha; m is an integer of 0 or 1;
  • L 1 is selected from Cys, Lys, Pen, Orn or Dpr;
  • X 2 is selected from 3-Asp or ⁇ -Asp( ⁇ OFm) ;
  • X 3 is selected from Ser, N-Me-Ala, Gly or Ala;
  • X 4 is selected from ThioP, Asn, TCA, Pro, Aib or Tic;
  • L 2 is selected from Cys, Cys-NH 2 (only when no X 5 or X 6 groups are present) , Asp, Pen or Glu;
  • X 5 is selected from Ala, Gly, Abu or Lys(Fmoc) ;
  • X 6 is selected from Asp- (OFm) , Asp- (NH-Ada) , Ser, Lys, Lys(Fmoc) -NH 2 or Gly.
  • R 1 is selected from a hydrogen atom, l-FCA, 9-FAc, Ada, 5-Fine, Ac, Biotinyl, 9-FCA, For, 9-FAc, 2-NaphAc, PhAc, l-NaphS0 2 , 2-NaphS0 2 , 2-NaphCA or Xan.
  • Z is selected from a single bond, a lower alkylene or a group of the formula: -COCH 2 -;
  • R 1 is selected from hydrogen, l-FCA, 9-FAc, Ada, 5- Fine, Ac, Biotinyl, 9-FCA, Fmoc, For, 9-FAc, 2-NaphAc, PhAc, 2-NaphCA or Xan;
  • is Trp; r is an integer of 0 or 1;
  • X 1 is selected from Arg, N ⁇ -Me-Arg, Lys, Lys(Ada), Lys(1-NaphAc) , Lys(PhAc) , Lys(For), Lys(2-NaphAc) , Orn, Orn(PhAc), Gly, Nle or Cha; m is an integer of 0 or 1;
  • L 1 is selected from Cys, Lys or Pen;
  • X 3 is selected from Gly or Ala;
  • X 4 is selected from ThioP, Asn, Pro or Tic;
  • L 2 is selected from Cys, Cys-NH 2 (only when no X 5 or X 6 groups are present) , Asp or Pen;
  • X 5 is selected from Ala, Gly, Abu or Lys(Fmoc) ; and X 6 is selected from Asp- (OFm) , Asp- (NH-Ada) , Ser, Lys, Lys(Fmoc) -NH 2 or Gly.
  • X 6 is selected from Asp- (OFm) , Asp- (NH-Ada) , Ser, Lys, Lys(Fmoc) -NH 2 or Gly.
  • R 1 is selected from a hydrogen atom, l-FCA, 9-FAc, Ada, 5-Finc, Ac, Biotinyl, 9-FCA, For, 9-FAc, 2-NaphAc, PhAc, l-NaphS0 2 , 2-NaphS0 2 , 2-NaphCA or Xan.
  • preferable ones are those wherein p is an integer of 1.
  • Other preferable compounds are compounds of the formula (I) wherein Z is a single bond;
  • R 1 is selected from l-FCA, 9-FAc, Ac or Xan; r is an integer of 0; X 1 is selected from Arg or Lys; m is an integer of 1; L 1 is Cys;
  • X 2 is 3-Asp; p is an integer of 0; X 4 is ThioP; q is an integer of 1; L 2 is selected from Cys or Cys-NH 2 (only when no X 5 or X 6 groups are present) ; n is an integer of 0; and s is an integer of 0.
  • X° in structure I is absent; X 1 is Arg; X 2 is j ⁇ -Asp; X 3 is absent; X 4 is ThioP; and X 5 and X 6 are absent.
  • the cyclizing Z moiety is formed by a disulfide linkage between L 1 and L 2 cysteine residues and the overall preferred sequence would be Arg-Cys*- (S-Asp) - (ThioP) -Cys* (* denotes residue involved in cyclization of compound) .
  • R 1 is preferably l-FCA, 9-FAc, 9-FCA, Xan, For, Ac, Biotinyl, Ada, a hydrogen atom, 5-Finc, PhAc or Su.
  • residue X° is absent, residue X 1 is Lys; residue X 2 is jS-Asp; X 3 is absent; X 4 is ThioP; and X 5 and X 6 are absent.
  • sequence Lys-Cys*- ( / ⁇ -Asp) - (ThioP) -Cys* is also preferred, wherein the cyclizing Z moiety is formed by the disulfide linkage between the cysteine residues.
  • R 1 is preferably l-FCA, 9-FCA or 9-FAc or Fmoc.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Arg; X 2 is 3-Asp; X 3 is absent; X 4 is ThioP; and X 5 is Ala, and n is 2 and X 6 is absent.
  • sequence Arg-Cys*- (S-Asp) - (ThioP) - Cys*-Ala-Ala is also preferred, wherein the cyclizing Z moiety is formed by a disulfide linkage between the cysteine residues.
  • R 1 is preferably l-FCA, 9-FCA, 2-NaphAc, l-NaphS0 2 , 2-NaphS0 2 , 2-NaphCA, Ac or PhAc.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Lys; X 2 is ⁇ -Asp; X 3 is absent; X 4 is ThioP; X 5 is Ala and n is an integer of 2 and X 6 is absent.
  • the sequence Lys-Cys*- ( ⁇ - Asp) - (ThioP) -Cys*-Ala-Ala is also preferred, wherein the cyclization of the peptide occurs through a disulfide linkage formed between the cysteine residues.
  • R 1 is preferably 9-FCA and R 2 is PhAc.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Arg; X 2 is jS-Asp; X 3 is absent; X 4 is ThioP; X 5 is Ala and X 6 is Asp.
  • R 1 is preferably Ac and R 4 is Ada or Fm.
  • sequence Orn-Cys*- (S-Asp) - (ThioP) -Cys* is also preferred, wherein the sulfhydryl linkages of the two cysteine residues cyclize the peptide.
  • R 1 is preferably l-FCA or Fmoc and the side chain terminal amino group of Orn is denoted as NHR 2
  • R 2 is preferably hydrogen or PhAc.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Arg; X 2 is /S-Asp; X 3 is absent; X 4 is ThioP; X 5 is Ala and X 6 is Ser.
  • the sequence Arg-Cys*- (S-Asp) - (ThioP) -Cys*-Ala-Ser is also preferred, wherein the peptide is cyclized by a disulfide linkage of the cysteine residues.
  • R 1 is preferably l-FCA.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Lys; X 2 is / ⁇ -Asp; X 3 is absent; X 4 is TCA; and X 5 and X 6 are absent.
  • the sequence Lys-Cys*- ( / S-Asp) - (TCA) -Cys* is also preferred, wherein the peptide is cyclized by a disulfide linkage of the cysteine residues.
  • R 1 is preferably Fmoc, 9-FAc, 9-FCA or l-FCA
  • the e-amino terminal group of Lys is denoted as NHR 2 and R 2 is preferably H, 1-NaphAc, 2-NaphAc or PhAc.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Lys; X 2 is /8-Asp; X 3 is absent; X 4 is Pro; X 5 and X 6 are absent.
  • the sequence Arg-Cys*- (/3-Asp) -Pro-Cys* is also preferred, wherein the peptide is cyclized by a disulfide linkage of the cysteine residue.
  • R 1 is preferably Fmoc, 9-FAc, 9-FCA or l-FCA.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Arg; X 2 is / ⁇ -Asp; X 3 is absent; X 4 is absent and X 5 and X 6 are absent.
  • the sequence Arg-Cys*- (/3-Asp) -Cys* is also preferred, wherein the cyclizing Z moiety is formed by a disulfide linkage between the cysteine residues.
  • R 1 is preferably l-FCA, 9-FCA, 9- FAc or Fmoc.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Arg; X 2 is / S-Asp; X 3 is absent; X 4 is ThioP; X 5 is Abu and X 6 is absent.
  • R 1 is preferably 9-FCA, l-FCA, 9-FAc or Fmoc.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Arg; X 2 is / S-Asp; X 3 is absent; X 4 is ThioP; X 5 is Ala and X 6 is absent.
  • R 1 is preferably l-FCA.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Arg; X 2 is /3-Asp; X 3 is absent; X 4 is ThioP; X 5 is Gly and n is an integer of 2 and X 6 is absent.
  • the sequence Arg-Cys*- ( ⁇ - Asp) - (ThioP) -Cys*-Gly-Gly is also preferred, wherein the cyclizing Z moiety is formed from the disulfide linkage of the cysteine residues.
  • R 1 is preferably l-FCA, 9-FCA, 9-FAc or Fmoc.
  • Another particularly preferred sequence is one wherein X° is absent; X 1 is Lys; X 2 is /8-Asp; X 3 is absent; X 4 is ThioP; X 5 is Ala and X 6 is Ser.
  • the sequence Lys-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ser is also preferred, wherein the cysteine residues are joined by a disulfide linkage.
  • R 1 is preferably l-FCA or 9-FCA
  • the e-amino terminal group of Lys is denoted as NHR 2 and R 2 is preferably H, 2-NaphAc, 1-NaphAc or PhAc.
  • amino acids are those from natural or non-natural sources and are those having at least one amino group and one carboxyl group in a molecule.
  • amino acids include amino acids from natural sources or antipodes thereof, D- or L-enantiomeric amino acids, and racemic mixtures of these amino acids.
  • ⁇ -Amino acids or /3-amino acids are the preferred examples and may be either one of neutral, acidic, and basic amino acids.
  • amino acids having plural amino groups or a guanidino group or an imidazolyl group such as arginine, histidine, ornithine, lysine, and the like
  • amino acids having plural carboxyl groups such as glutamic acid, aspartic acid, and the like
  • amino acids having the same number of amino groups and carboxyl groups such as alanine, isoleucine, leucine, and the like.
  • amino acids which can be used suitably, include glycine, alanine, N-methylalanine, N- ⁇ -methylarginine, isoleucine, leucine, valine, norvaline, glutamic acid, methionine, phenylalanine, proline, 8-alanine, arginine, norarginine, ornithine, serine, 0-methylserine, threonine, O-methylthreonine, asparagine, aspartic acid, jS-aspartic acid, glutamine, ⁇ -glutamine, cystine, cysteine, tyrosine, O-methyltyrosine, histidine, tryptophan, lysine, homoarginine, ⁇ -glutamic acid, sarcosine, creatine, homocysteine, norleucine, isoserine, homoserine, norvaline, ornithine, penicillamine,
  • Amino acid mimetics are derivatives of the above amino acids. Specific examples of those which can be used suitably, include ester thereof (e.g., a lower alkyl ester, aryl ester), amide thereof (e.g., unsubstituted amide, a cyclohexylamide) or derivative of proline (e.g., thioproline, 3-thiomorpholinecarboxylic acid, tetrahydro-1,3-thiazine-4-carboxylic acid, homoproline, hydroxyproline) and the like.
  • ester thereof e.g., a lower alkyl ester, aryl ester
  • amide thereof e.g., unsubstituted amide, a cyclohexylamide
  • proline e.g., thioproline, 3-thiomorpholinecarboxylic acid, tetrahydro-1,3-thiazine-4-carboxylic acid, homoproline,
  • An aryl group, an aryl moiety in the arylalkyi, aryloxycarbonyl, arylcarbonyl, arylacetyl or arylalkoxycarbonyl is preferably an aromatic hydrocarbocyclic group containing 1 to 4 rings, such as phenyl group, naphthyl group, and the like.
  • a heteroaryl group is preferably an aromatic group containing 1 or 2 rings wherein at least one of the rings contains at least 1, preferably 1 to 3, more preferably 1 or 2 heteroatoms such as N, 0 or S wherein the remainder of the ring atoms are carbon atoms, wherein each ring contains 4 to 7 ring atoms, with a total of 4 to 11 ring atoms where two fused rings are present.
  • a heteroaryl group is a 5- or 6- membered aromatic heterocyclic group such as thienyl group, furyl group, pyridyl group, pirazinyl group, pyrimidinyl group, and the like.
  • the above aryl and/or heteroaryl group may have one to three substituents and as the substituent, there may be mentioned a halogen atom, a lower alkyl group and a lower alkoxy group.
  • a lower alkyl group is preferably a C ⁇ C g alkyl group, more preferably a C-_-C 5 alkyl group
  • a lower alkanoyl group is preferably a C 1 -C 9 alkanoyl group, more preferably a C- j ⁇ -C 8 alkanoyl group
  • a lower alkoxy group is preferably a C 1 -C 8 alkoxy group, more preferably a C 1 -C 5 alkoxy group
  • aryl is preferably a C 6 -C 17 aryl group (containing 1 to 4 rings) , more preferably a C 8 -C 12 aryl group (containing 1 or 2 rings) and most preferably is an aromatic hydrocarbocyclic group containing 1 or 2 rings, such as a phenyl group, naphthyl group and the like
  • arylalkyi is preferably a C 6 -C 17 or C 6 -C 12 aryl group (containing 1 or 2
  • Aryl-O-C(O) -) more preferably a C 6 -C 13 aryloxycarbonyl (containing 1 or 2 rings)
  • arylcarbonyl is preferably an aryl group as defined above having a carbonyl group attached to one of the ring carbon atoms (e.g. Aryl-C(O)-) , more preferably C 7 - C 16 arylcarbonyl (containing 1 or 2 rings)
  • arylacetyl is preferably an aryl group as defined above having an acetyl group attached to one of the ring carbon atoms (e.g.
  • Aryl-CH 2 -C(0) -) more preferably a C 8 -C 17 arylacetyl group (containing 1 or 2 rings) and heterocyclic is preferably a heterocyclic group containing l or 2 rings containing at least 1, preferably 1 to 3, more preferably 1 or 2 heteroatoms such as N, O or S wherein the remainder of the ring atoms are carbon atoms, wherein each ring is saturated or unsaturated and contains 4 to 7 ring atoms, with a total of 4 to 11 ring atoms where two fused rings are present.
  • an effective amount of the active compound, including derivatives or salts thereof, or a pharmaceutical composition containing the same in combination with a pharmaceutical carrier or diluent, as described below, is administered via any of the usual and acceptable methods known in the art, either singly or in combination with another compound or compounds of the present invention or other pharmaceutical agents such as immunosuppressants, antihistamines, corticosteroids, and the like.
  • compositions can thus be administered orally, sublingually, topically (e.g., on the skin or in the eyes) , by inhalation, by suppository, or parenterally (e.g., intramuscularly, intravenously, subcutaneously or intradermally) , and in the form of either solid or liquid dosage including tablets, suspensions, and aerosols, as is discussed in more detail below.
  • the administration can be conducted in single unit dosage form with continuous therapy or in single dose therapy ad libitum.
  • a unit dose is defined as 1 to 3000 mg for a human patient.
  • compositions hereof can be solids, liquids or mixtures thereof; thus, the compositions can take the form of tablets, pills, capsules, powders, enterically coated or other protected formulations (such as binding on ion exchange resins or other carriers, or packaging in lipid or lipoprotein vesicles or adding additional terminal amino acids) , sustained release formulations, erodible formulations, implantable devices or components thereof, microsphere formulations, solutions (e.g., ophthalmic drops), suspensions, elixirs, aerosols, and the like.
  • protected formulations such as binding on ion exchange resins or other carriers, or packaging in lipid or lipoprotein vesicles or adding additional terminal amino acids
  • sustained release formulations such as binding on ion exchange resins or other carriers, or packaging in lipid or lipoprotein vesicles or adding additional terminal amino acids
  • erodible formulations e.g., implantable devices or components thereof
  • microsphere formulations solutions (e.g., ophthalmic drops
  • Water, saline, aqueous dextrose, and glycols are preferred liquid carriers, particularly (when isotonic) for injectable solutions.
  • the carrier can be selected from various oils including those of petroleum, animal, vegetable or synthetic origin, for example, peanut oil, soybean oil, mineral oil, sesame oil, and the like.
  • Suitable pharmaceutical excipients include starch, cellulose, talc, glucose, lactose, sucrose, gelatin, malt, rice, flour, chalk, silica gel, magnesium stearate, sodium stearate, glycerol monostearate, sodium chloride, dried skim milk, glycerol, propylene glycol, water, ethanol, and the like.
  • compositions may be subjected to conventional pharmaceutical expedients such as sterilization and may contain conventional pharmaceutical additives such as preservatives, stabilizing agents, wetting or emulsifying agents, salts for adjusting osmotic pressure, buffers, and the like.
  • suitable pharmaceutical carriers and their formulations are described in Martin, "Remington's Pharmaceutical Sciences", 15th Ed.; Mack Publishing Co., Easton (1975); see, e.g., pp. 1405-1412 and pp. 1461-1487.
  • Such compositions will, in general, contain an effective amount of the active compound together with a suitable amount of carrier so as to prepare the proper dosage form for proper administration to the host.
  • the therapeutic methods of the present invention are practiced when the relief of symptoms is specifically required or perhaps imminent; in another preferred embodiment, the method hereof is effectively practiced as continuous or prophylactic treatment.
  • the particular dosage of pharmaceutical composition to be administered to the subject will depend on a variety of considerations including the nature of the disease, the severity thereof, the schedule of administration, the age and physical characteristics of the subject, and so forth. Proper dosages may be established using clinical approaches familiar to the medicinal arts. It is presently believed that dosages in the range of 0.1 to 100 mg of compound per kilogram of subject body weight will be useful, and a range of 1 to 100 mg per kg generally preferred, where administration is by injection or ingestion.
  • Topical dosages may utilize formulations containing generally as low as 0.1 mg of compound per ml of liquid carrier or excipient, with multiple daily applications being appropriate.
  • the compounds and therapeutic or pharmaceutical compositions of the invention might be useful in the study or treatment of diseases or other conditions which are mediated by the binding of integrin receptors to ligands, including conditions involving inappropriate (e.g., excessive or insufficient) binding of cells to natural or other ligands.
  • Such diseases and conditions might include inflammatory diseases such as rheumatoid arthritis, asthma, allergy conditions, adult respiratory distress syndrome, inflammatory bowel diseases (e.g., ulcerative colitis and regional enteritis) and ophthalmic inflammatory diseases; autoimmune diseases; and cardiovascular disease; prevention of occlusion following thrombolysis; neoplastic disease including metastatic conditions; as well as conditions wherein increased cell binding is desired, as in wound healing or prosthetic implantation situations, as discussed in more detail above.
  • inflammatory diseases such as rheumatoid arthritis, asthma, allergy conditions, adult respiratory distress syndrome, inflammatory bowel diseases (e.g., ulcerative colitis and regional enteritis) and ophthalmic inflammatory diseases; autoimmune diseases; and cardiovascular disease; prevention of occlusion following thrombolysis; neoplastic disease including metastatic conditions; as well as conditions wherein increased cell binding is desired, as in wound healing or prosthetic implantation situations, as discussed in more detail above.
  • the compounds of the present invention might find use in the diagnosis of diseases which result from abnormal cell adhesion.
  • diseases which result from abnormal cell adhesion For example, excessive adhesion of leukocytes to endothelial cells or to exposed extracellular matrix in blood vessels has been implicated in early stages of atherosclerosis.
  • a person demonstrating excessive binding of leukocytes to endothelial cells might be at risk for developing occluded arteries.
  • One might detect this risk factor by measuring the binding of a compound of structure I to leukocytes and endothelial cells of the patient thought to be at risk.
  • the compounds of the present invention might find use in the diagnosis of autoimmune diseases caused by antibodies which bind to cell adhesion molecules or which bind to receptors for cell adhesion molecules.
  • a disease is caused by antibodies binding to a cell adhesion molecule which is mimicked by a compound of structure I
  • a diagnostic test for the presence of such antibodies is easily performed by immunoassay of blood or serum from a patient using a compound of structure I bound to a carrier so as to capture the antibodies.
  • the bound antibody can be detected by the means typical of the art such as a labelled second antibody directed to the Fc portion of human antibodies or using labelled Fc-binding proteins from bacteria (protein A or protein G) .
  • a competitive immunoassay format can be used. In this format, the compound I is labelled and competition for binding to receptor protein attached to the substrate can be measured.
  • derivatives of the present compounds might be useful in the generation of antigens which are prepared by coupling the peptides to a carrier protein. Animals are then immunized with this complex thereby generating antibodies to the peptides. These antibodies will, in some cases, themselves be effective in inhibiting cell adhesion or modulating immune activity by acting as receptors for cell adhesion ligands, or, if anti-idiotypic, by acting to block cellular receptors.
  • the compounds of the present invention might be used to produce matrices for purifying substances which bind to the compounds of the present invention with high affinity.
  • a matrix could be produced, for example, by covalently attaching a compound of the present invention to a derivatized chromatographic support.
  • a cyclic peptide listed in Table 1 which contains a free amino group can be coupled to a cyanogen bromide activated chromatography resin, such as that available from Pharmacia, (Uppsala, Sweden, Cat. No. 52-1153-00-AK) .
  • an amino group can be introduced into the desired peptide, either by addition of a lysine residue, or by addition of another amine-containing residue.
  • carbodiimide-activated resin can be used in conjunction with cyclic peptides bearing free carboxyl functions.
  • the peptide is coupled using the protocol essentially as provided by the manufacturer.
  • the cyclic peptide-derivatized resin can then be used to purify proteins, polysaccharides or the like which may bind the cyclic peptide with high affinity.
  • Such a purification is accomplished by contacting the cyclic peptide- derivatized resin with a sample containing the compound to be affinity purified under conditions which allow formation of the specific complex, washing of the complex bound to the resin with a solution which removes unwanted substances, but leaves the complex intact, and then eluting the substance to be purified by washing the resin with a solution which disrupts the complex.
  • Boc protecting group was removed by mixing the resin with TFA:DCM (1:1) for 20 minutes. Following rinsing in order with DCM (3X) , MeOH (2X) , DCM (3X) the resin was air dried.
  • TCA When used in the peptide synthesis, TCA was obtained by the chemical synthesis procedures fully disclosed in the Published International Patent Application WO 94/15958. Those procedures are fully incorporated in their entirety into this application by reference.
  • Boc-deprotected peptides on-resin were cleaved by stirring at -5 to 0°C with a cocktail of distilled anhydrous HF (10 ml/g resin) , anisole (1 ml/g resin) and dimethyl sulfide (0.5 ml/g resin) . After one hour, the HF was removed under reduced pressure. The cleaved peptide/resin mixture was washed three times with diethyl ether and then extracted with 80% aqueous acetic acid. The combined extracts (100 ml/g or 200 ml/2g resin) were pooled and carried on to the cyclization step.
  • Cyclization The peptides were cyclized through the formation of an amide linkage, a disulfide linkage, a monosulfide linkage or a dithioether linkage, as appropriate.
  • the cyclic peptide was purified on a Waters Delta Prep 3000 system (Waters, Milford, Massachusetts) equipped with C 18 reverse phase column (15-20 mm, 5X30 cm ID) , using a linear gradient of increasing acetonitrile concentration in 1.0% triethylammonium phosphate (TEAP, pH 2.3) as the mobile phase. The appropriate fractions were pooled to give the pure peptide as a phosphate salt. The peptide salt was applied again to the column and eluted with a linear gradient of increasing amounts of acetonitrile in 1.0% aqueous HOAc to afford the desired acetate salt form.
  • TEAP triethylammonium phosphate
  • N-Boc-L- ⁇ -Asp- / ⁇ - fluoromethyl ester was attached to the hydroxymethyl resin using DCC and DMAP as a catalyst (Fehrentz, J.A. and Castro B., Synthesis. 676-678 (1983)).
  • Boc-L- ⁇ - Asp(OFm)OCH 2 -resin (1.0 g, 0.75 mmol) was used as the starting resin. Excess amino acid (2-3 fold) was used for each coupling.
  • the peptide chain was constructed on the Beckman peptide synthesizer using Boc chemistry with the stepwise addition of each amino acid following the standardized cycle similar to that presented in Table 1, with adjustments for scale. 50% TFA in DCM, 5% DIEA in DCM, and 0.5 M of DCC in DCM were used as deprotecting, neutralizing, and activating agents, respectively, for each cycle.
  • the peptide was cyclized on the resin by forming an amide linkage between the ⁇ -carboxyl group of Asp and the e-amino group of Lys using the following general procedure.
  • the final cyclic compound was removed from the resin by treatment with HF in the presence of anisole for 1 hr at 0°C. After removal of the HF, in vacuo, the residue was washed with diethyl ether and the peptide was extracted from the resin with an aqueous HOAc solution. The aqueous extract was lyophilized to yield the crude peptide.
  • the compound was purified using a Waters Delta Prep 3000 system (Waters, Milford, MA) equipped with a C 18 column, using a linear gradient of increasing acetonitrile concentration in TEAP (pH 2.2 to 2.4) as the mobile phase.
  • the collected fractions of the pure compound were pooled and applied again to the C 18 column. This time the sample was eluted with a linear gradient of increasing amounts of acetonitrile in 1.0% aqueous HOAc to convert the phosphate salt form of the peptide to the desired acetate form.
  • the pure peptide fractions were pooled, concentrated in vacuo, redissolved in water and lyophilized to give a white powder.
  • This procedure can also be used for synthesis and purification of longer cyclic peptide compounds which contain a disulfide linkage.
  • Trifluoroacetic acid was from Halocarbon Co. (New York,
  • Triethylamine was from Fisher Scientific
  • the peptide was synthesized by the solid phase method with a Beckman automated peptide synthesizer
  • Boc-Lys(Fmoc) Boc-/8-Asp( ⁇ -0-Bzl) and Boc- (ThioP) .
  • Boc-Cys(4-Me-Bzl) -0CH 2 -polystyrene resin was used for the stepwise assembly of the title peptide, using the Boc amino acid procedure in Table 1. Following capping of the N-terminus with l-FCA, the Lys N-e-Fmoc group was removed by treatment with 20% piperidine in DMF. The solution was then stirred for 20 minutes at room temperature and filtered. The resin was washed with DMF.
  • the free Lys side-chain amino group was coupled with bromoacetic acid and after HF cleavage, the peptide was cyclized by forming a mono-sulfide linkage by the general procedure, as described below.
  • the Lys side-chain deprotected peptide was coupled with bromoacetic acid through the use of DCC in DCM. The mixture was stirred for 2 hours at room temperature
  • the bromoacetyl peptide was removed from the resin by treatment with HF in the presence of anisole (1 ml/g resin) and DMS (0.5 ml/g resin) for 1 hr. at 0°C. The HF was removed under reduced pressure. The cleaved mixture was washed three times with diethyl ether and the peptide was extracted into aqueous acetic acid. This bromoacetyl peptide is unstable, and the cyclization to form the monosulfide bridge immediately followed the HF cleavage.
  • 1-Fluorenecarboxylic acid, dibromoethane, and DCC were purchased from Aldrich Chemical Company (Milwaukee, WI) . All amino acids, amino acid derivatives and analogs were purchased from BACHEM INC. (Torrance, California) . Trifluoroacetic acid was from Halocarbon Co. (New York, New York) . Triethylamine was from Fisher Scientific (Fall Lawn, New Jersey) . Other reagents were obtained from conventional sources and were of analytical grade.
  • the peptide was synthesized by the solid phase method with a Beckman automated peptide synthesizer (System 990, Beckman Instruments, Inc., Palo Alto, California) . N-Boc-S-9-Fluorenylmethyl-L-Cysteine was attached to the hydroxymethyl resin using DCC and DMAP as a catalyst. The following amino acids were used in the synthesis: Boc-Arg(Tos) , Boc- / S-Asp( ⁇ -0-Bzl) and Boc- (ThioP) . Boc-Cys(Fm) -0CH 2 -polystyrene resin was used for the stepwise assembly of the peptide following the Boc amino acid procedure in Table 1.
  • the dithioether linkage (-S- (CH 2 )n-S-) was synthesized while the peptide was bound on the resin.
  • the dithioether linkage was formed by adding dibromoethane (3 equivalents) and DIEA in DMF. The pH was adjusted to 8-9, and the solution was stirred for 2 to 4 hours at room temperature, (completion of the cyclization was monitored by HPLC and the Ellman test) . The peptide was then washed with DMF (2 x 1 min) , DCM (3 x 1 min) , MeOH (2 x 1 min) and DCM (3 x 1 min) .
  • the cyclic peptide was removed from the resin by treatment with HF in the presence of anisole for 1 hr. at 0°C. After removal of the HF, in vacuo, the residue was washed with diethyl ether and the peptide was extracted into an aqueous acetic acid solution. The aqueous extract was lyophilized to yield the crude peptide.
  • the crude peptide was purified as described for Procedure A, Section 4. TABLE 2
  • Amino acids of the peptide backbone are delineated with hyphens; synthetic amino acids unnatural amino acids, and amino acid mimetics are enclosed in parentheses; the R 1 -R 5 group which are attached to the backbone amino acid groups are enclosed in parentheses and ar
  • the following assay established the activity of the present compounds in inhibiting ⁇ -mediated cell adhesion in a representative in vitro system.
  • This assay measured the adhesive interactions of a T-cell line, Jurkat, known to express high levels of ⁇ / 8 1 , to endothelial cell monolayers in the presence of representative test compounds of the present invention.
  • the test compounds were added in increasing concentrations to T-cells and then the T-cell/compound mixture was added to IL-1 stimulated endothelial cell monolayers. The plates were incubated, washed and the percentage of attached cells was quantitated.
  • the present assay directly demonstrated the cell adhesion inhibitory activity and adhesion modulatory activity of the present compounds.
  • Human umbilical vein endothelial cells were purchased from Clonetics (San Diego, CA) at passage number 2. The cells were grown on 0.5% porcine skin gelatin pre-coated flasks (Sigma, St. Louis, MO) in EGM- UV media (Clonetics, San Diego, CA) supplemented with 10% fetal bovine serum. Cells were re-fed every 2-3 days, reaching confluence by day 4 to 6. The cells were monitored for factor VIII antigen and our results showed that at passage 12, the cells are positive for this antigen. The endothelial cells were not used following passage 7. The T-cell line Jurkat was obtained from American Type Culture Collection and cultured in RPMI media containing 10% fetal calf serum.
  • HBSS Hank's buffered saline solution
  • DMEM Dulbecco's Minimal Eagle's Media
  • HSA Human Serum Albumin
  • Confluent endothelial monolayers grown in 96-well tissue culture plates, were stimulated for 4 hours at 37°C with 0.1 ng/ml (50 U/ml) recombinant IL-1 (Amgen, Thousand Oaks, CA) . Following this incubation, the monolayers were washed twice with HBSS and 0.1 ml of DMEM-HSA solution was added.
  • Jurkat cells (5 x 10 5 cells) were combined with the appropriate concentration of peptide and 0.1 ml of the Jurkat cell-peptide mixture was added to the endothelial cell monolayers. Generally, 250, 50, 10 and 2 ⁇ M peptide concentrations were tested.
  • the IC 50 was determined by testing the peptides at 50, 10, 2 and 0.4 ⁇ M. The plates were placed on ice for 5 minutes to allow for Jurkat cell settling and the plates were incubated at 37°C for 20 minutes. Following this incubation, the monolayers were washed twice with PBS containing 1 mM calcium chloride and 1 mM magnesium chloride and the plates were read using a Millipore Cytofluor 2300 (Marlboro, MA) . Fluorescence in each well was measured as Arbitrary Fluorescence Units and percent adhesion in the absence of peptide was adjusted to 100% and the % adhesion in the presence of peptides was calculated. Monolayers were also fixed in 3% paraformaldehyde and evaluated microscopically to verify the adhesion.
  • the JY-Endothelial Cell Assay The following assay established the activity of the present compounds in inhibiting cell adhesion through ⁇ 2 integrins in a representative in vi tro system. The present assay directly demonstrated the anti- / 8 2 adhesion activity and adhesion modulatory activity of the present compounds.
  • the human B cell line, JY was cultured in RPMI media containing 10% fetal calf serum at 37°C, in a humidified C0 2 atmosphere. Endothelial cells were grown to confluency in 96-well micro-titer assay plates, as in the Jurkat-EC ' assay. Before the assay, the endothelial cells were stimulated with 50 U/ml rTNF for 18-24 hours at 37°C.
  • JY cells were loaded with the fluorescent dye indicator BCECF-AM as follows: JY cells were washed twice with HBSS and cells were resuspended in HBSS at 5X10 6 cells/ml; BCECF-AM (Molecular Probes), stock concentration ⁇ mg/ml in DMSO, was added to the JY cells to a final concentration of 2 ⁇ g/ml; cells were incubated in the dark at 37°C for 30-45 minutes; washed twice with HBSS and used in the assay.
  • the compounds presented in this invention were typically dissolved in 2.5 mg HSA/ml DME at four times the assay concentration and Ph adjusted with 7.5% Na bicarbonate, as needed.
  • TNF-stimulated HUVEC were washed twice with HBSS (at room temp) .
  • 50 ⁇ l of cold HSA-DME was added to each well and the plate transferred to ice. While on ice, the following components were added to the wells in the indicated order:
  • test compound 2 50 ⁇ l BCECF-labelled JY cells
  • the above-described adhesion assay yielded the following results for the inhibition of Jurkat cell adhesion to IL-1 stimulated endothelial cells.
  • an objective of the present invention is to provide compounds having extraordinarily high potencies in modulating cell adhesion to VCAM and ICAM through ⁇ and ⁇ 2 integrins, respectively, including but not limited to inhibition of T-cell adhesion to endothelial cells.
  • the exact receptors involved in this interaction and the specific receptors targeted by the test compounds include, but are not limited to, a ⁇ i 0* 4/ 8 7 ,
  • the amino acid without an indication of enantiomeric structure means L 25 enantiomer.

Abstract

The present invention describes cyclic peptide compounds which modulate integrin mediated adhesion. These compounds can inhibit both β1 and β2 mediated adhesion. The invention further relates to therapeutic uses for these compounds in the treatment of adhesion related pathologies.

Description

Cyclic peptide inhibitors of β and β2 integrin-mediated adhesion
BACKGROUND OF THE INVENTION Field of Invention The present invention relates to novel cyclic peptides and peptidomimetic compounds which are characterized by cell adhesion modulation activity.
Description of Related Art
Vascular endothelial cells form the interface between blood and tissues and control the passage of leukocytes as well as plasma fluid into tissues. A variety of signals generated at the site of inflammation can activate both endothelial cells as well as circulating leukocytes so that they become more adhesive to one another. Activation of endothelium and leukocytes initiates a complex adhesion cascade. This adhesion cascade involves the "tethering" of the leukocytes to the endothelium, after which they "roll" along the endothelial surface and finally strongly adhere and migrate into tissue to perform host defense functions. Several adhesion molecules, belonging to a super gene family consisting of non-covalently associated heterodimeric proteins called integrins, have been identified as being involved in leukocyte- endothelial cell interactions. The β2 integrin subfamily includes LFA-1 (CDlla/CD18) , Mac-1 (CDllb/CD18, CR3) and pl50/95 (CDllc/CD18, CR4) . The known ligands for LFA-1 are ICAM-1, ICAM-2 and ICAM-3. The Intracellular Adhesion Molecules (ICAM) are members of the Ig gene superfamily. ICAM-1 is the most ubiquitous of the ICAMs, being expressed in low levels on most peripheral blood leukocytes as well as endothelial cells, fibroblasts and dendritic cells. Cytokine activation of endothelial cells induces a dramatic increase in the expression of ICAM-1 and LFA-l/lCAM-1 interactions which are integral to both lymphocyte adhesion and transmigration through the endothelial barrier; Dustin, M. . et al, J. Immunol. , 137, 245-254 (1986) . ICAM-2 is primarily constitutively expressed on endothelial cells; de Fougerolles, A.R. et al, J. EXP. Med.. 174, 253-267 (1991) , and ICAM-3 is largely found on resting lymphocytes, monocytes and neutrophils; and shows increased expression upon T cell activation; de Fougerolles, A.R. and Springer, T.A. , J. EXP. Med.. 175. 185-190 (1992) .
In addition to its critical role in mediating cellular adhesion, ICAM-1 has also been shown to act as a receptor for a subgroup of rhinoviruses known as the major groups, and soluble ICAM-1 has been shown to act as specific inhibitor of rhinovirus infection; Martin, S.D. et al, Nature. 344. 70-72 (1990) . A compound which blocks the interaction of rhinovirus with ICAM-1 may be a powerful pharmacological agent for the prevention and treatment of colds and secondary complications arising from rhinovirus infection.
Members of the β integrin subfamily include a^i > oe2βl l a2βl t a^β± (V A-4, CD49d/CD29) , otηβ , ot5β1 (V A-5, CD49e/CD29) , a6βl t aeβχ and vβλ (CD51/CD29) . a β binds to both fibronectin and the cytokine inducible molecule on endothelial cells termed vascular cell adhesion molecule (VCAM) .
Figure imgf000004_0001
interaction has been shown to be involved with lymphocyte extravasation at sites of chronic inflammation; Elices, -M.J. et al, Cell. 6>fJ, 577- 584 (1990) .
An additional member of the "CAM" family of integrin ligands which plays an important role in adhesion is MadCAM (mucosal addressin cell adhesion molecule) . This molecule which is primarily expressed on Peyer's Patch HEV and lamina propia vessels, is involved with the homing of lymphoid subsets through interactions with the integrin α47; Streeter, P.R. et al, Nature. 331. 41 (1988) .
Data support important roles for both of431/VCAM and LFA-1/ICAM in inflammation. In vitro data show that antibodies to Cf4 block adhesion of lymphocytes to synovial endothelial cells; this adhesion plays a potential role in rheumatoid arthritis (van Dinther-Janssen et al, J. Immunol.. 147. 4207 (1991) ) . Studies in which monoclonal antibodies to α4 block adhesion of basophils and eosinophils to cytokine activated endothelial cells (Walsh et al, J. Immunol..
146. 3419 (1991); Bochner et al, J. EX . Med.. 173. 1553 (1991) ) imply a potential role of α4 in allergy and asthma. Additionally, in vivo studies have shown that experimental autoimmune encephalomyelitis can be blocked by anti-α4 monoclonal antibodies (Yednock et al., Nature. 356. 63 (1992) ) . Migration of leukocytes to an inflammatory site can also be blocked by anti-α4 monoclonal antibodies (Issekutz et al., J. Immunol..
147. 4178 (1991) ) . Lastly, in a model of contact hypersensitivity, peptides Gly-Arg-Gly-Asp-Ser-Pro or
Glu-Ile-Leu-Asp-Val block ear swelling when administered with sensitized cells into a challenged naive recipient mouse suggesting that ot^β1 and possibly oι5β1 are involved in this inflammatory response (Ferguson et al., Proc. Natl. Acad. Sci. USA. 88. 8072 (1991) ) . Compounds which interact with the ot^β and ot βη receptors are described in PCT Publication No. WO 94/15958. However, this publication does not describe that any of the compounds described therein inhibit β and β2 integrin-mediated adhesion. β2 integrins and ICAM have been shown to have important roles in graft rejection, ischemia reperfusion, delayed type hypersensitivity, asthma and allergies, inflammatory bowel disease, rheumatoid arthritis and AIDS. Support for the importance of β2 integrins in mediating inflammatory responses has been demonstrated by the ability of monoclonal antibodies which recognize LFA-1 to block CTL-mediated lysis of target cells, as well as inhibit proliferation of T cells in response to soluble antigens, alloantigens and mitogen. Several in vivo models have demonstrated the importance of β2 integrins in delayed-type hypersensitivity. Anti-LFA-1 antibodies have been shown to block the migration of spleen T cells to sites of dermal inflammation, as well as the homing of lymph node and spleen T cells to peripheral and mesenteric lymph node in rats; Issekutz, T.B., J. Immunol.. 149. 3394- 3402 (1992) . Both anti-LFA-1 and anti-ICAM-1 antibodies can reduce ear swelling caused by edema and cell infiltration in association with delayed-type hypersensitivity; Scheynius, A. et al, J. Immunol.. 150. 655-663 (1993) .
The role of β2 integrins in allograft rejection has been demonstrated by the ability of anti-ICAM-1 antibodies to control allograft rejection and reperfusion injury in humans; Cosimi, A.B. et al, J. Immunol.. 144. 4604-4612 (1990); Haug et al, Transplantation. 55, 766-773 (1993) .
Anti-ICAM-1 antibodies have also been shown to attenuate airway eosinophilia, hyperresponsiveness and asthma symptoms in a primate asthma model.
Importantly, it has been demonstrated in vivo that while either anti-α4S1 or anti-LFA-1 antibodies alone demonstrate inhibition of delayed-type hypersensitivity- induced inflammation, a maximal anti-inflammatory response is obtained when anti-α4/31 and anti-LFA-1 antibodies are used in combination; Issekutz, T.B., Amer. J. Path.. 143. 1286-1293 (1993) .
As both multiple integrin/"CAM" interactions play important roles in the adhesion of leukocytes to endothelium in the inflammatory process, an ideal treatment for inflammatory disease would target both types of integrin/endothelial cell interactions.
SUMMARY OF THE INVENTION
One objective of the present invention is to provide compounds which act to modulate cell adhesion. These compounds are represented by the formula (I) :
Figure imgf000007_0001
or a pharmaceutically acceptable salt thereof, wherein L1 is a residue of an amino acid or an amino acid mimetic, having a functional group suitable for the formation of a cyclizing bridge, Z, between L1 and L2. L2 is a residue of an amino acid or an amino acid mimetic, having a functional group suitable for the formation of a cyclizing bridge, Z, between L1 and L2. Z is a cyclizing moiety or bond between L1 and L2; X° is a residue of an amino acid or an amino acid mimetic and r is an integer of 0 or 1. X1 is a residue of an amino acid or an amino acid mimetic and m is an integer of 0, 1 or 2. X2 is jS-Asp or γ-Glu or an ester or an amide derivative formed from the -carboxyl group of any of the aforementioned groups. X3 is Ser(R4), Thr(R4), Tyr(R4), Ala, Gly, Lys(R4), Orn(R4), Dpr(R4), N-Me-Ala, Aib, Val, Tic, o- or m- halo-Tyr, dihalo-Tyr, p-halo- Phe, dihalo-Phe, Sar, Leu, lie, Nle or Cys(R4) wherein when X3 is Ser(R4), Thr(R4) or Tyr(R4), then R4 is a substituent of the side chain hydroxyl group of X3 and is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, a cycloalkyi-lower alkanoyl, an aryl, an arylalkyi, an aryloxycarbonyl, an arylcarbonyl, a heteroaryl-lower alkyl, an arylacetyl, a heterocyclic group, a lower alkanoyl, and arylalkoxycarbonyl, when X3 is Lys(R4), 0rn(R4) or Dpr(R4), then R4 is a substituent of the side chain terminal amino group of X3 and is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, a lower alkanoyl, an arylalkyi, an arylalkoxycarbonyl, an aryl, an aryloxycarbonyl, an arylcarbonyl, an arylacetyl, and a cycloalkyi-lower alkanoyl, when X3 is Cys(R4) , then R4 is a substituent of the side chain sulfhydryl group of X3 and is selected from the group consisting of a hydrogen atom, lower alkyl, an arylalkyi, an aryl, a cycloalkyi, an aryloxycarbonyl, an arylcarbonyl, an acetamido-lower alkyl, an arylacetyl, a heterocyclic group, lower alkanoyl, an arylalkoxycarbonyl and a cycloalkyi-lower alkanoyl. p is an integer of 0 or 1. X4 is Pro,
ThioP, Aib, TTC, Asn, TCA, Sar, N-Me-Ala and other N- methylated natural amino acids, Tic or pipecolinic acid
(homoproline) . q is an integer of 0 or 1. X5 is a residue of an amino acid or an amino acid mimetic, n is an integer of 0, 1, 2 or 3. X6 is a residue of an amino acid or an amino acid mimetic, s is an integer of 0 or 1. R1 is a hydrogen atom, Xan, Fmoc, 9-FAc, 9-FCA, 1- FCA, Ac, 2-NaphAc, Ada, 5-Fine, biotinyl, Su, 1-NaphCA, For, 1-NaphAc, PhAc, l-NaphS02, 2-NaphS02 or 2-NaphCA, with the proviso that the compound (Fmoc) -Arg-Cys*- (β- Asp) - (ThioP) -Cys* is not included.
Another objective of the present invention is to provide a method for modulating cell adhesion. Another objective of the present invention is to provide compounds which bind to a cell adhesion molecule or integrin receptor. Another objective of the present invention is to provide compounds having high potency in modulating specific cell adhesion to integrin receptors, including inhibition of cell adhesion to ligands for both β and β2 integrins. Thus, in one regard, the present invention includes compounds having an IC50 of less than about 500 μM as established in JY-Endothelial cell and Jurkat-Endothelial cell adhesion assays; in another regard, the invention includes compounds having an IC50 of less than about 100 μM in such assays. The invention also includes methods for obtaining (either in vi tro or in vivo) , such integrin receptor adhesion inhibition. The compounds of the present invention accomplish strong inhibition, at low concentrations, with an IC50 of less than about 500 μM, or alternatively less than about 100 μM.
Another objective of the present invention is to provide compounds having high potency in modulating leukocyte adhesion to endothelial cells. Thus, in one regard, the present invention includes compounds having an IC50 of less than about 200 μM as established in Jurkat-endothelial cell and JY-endothelial cell adhesion assays. Compounds with activity below 100 μM are most preferred, below 150 μM are preferred, below 500 μM are less preferred and above 500 μM least preferred. The invention also includes methods for obtaining (either in vitro oτ in vivo) such leukocyte receptor adhesion inhibition. The compounds of the present invention accomplish strong inhibition at low concentrations, with an IC50 of less than about 250μM.
Another objective of the present invention is to provide compounds, pharmaceutical compositions, and methods which may be used in the study, diagnosis, treatment or prevention of diseases and conditions which involve or relate to cell adhesion.
Another objective of the present invention is to provide compounds, pharmaceutical compositions and methods of treatment which may be used to inhibit inflammatory diseases in humans.
Another objective is to provide antibodies made by using the compounds of the invention, such as, but not limited to, antibodies to the compounds and anti- idiotype antibodies to the antibodies disclosed in order to study, diagnose, treat or prevent the above mentioned diseases and conditions which relate to cell adhesion. Another objective of the present invention is to provide a matrix which can be used to purify proteins, polysaccharides or other compounds which specifically bind to the cyclic peptides of the present invention with high affinity.
The present invention relates to compounds meeting one or more of the above objectives. The compounds have activity as cell adhesion modulators. The novel compounds have been found to modulate cell adhesion by competing, for example, with integrin specific ligands, such as but not limited to, ICAM-1 and VCAM, which are sufficiently inhibited from binding to the leukocyte receptors so as to prevent or reduce cell-cell adhesion. Other uses for the compounds include enhancing cell adhesion to a distinct surface. These useful compounds can function as both cell-adhesion agonists and antagonists.
DETAILED DESCRIPTION OF THE INVENTION
The following detailed description, including those compounds exemplified herein, is provided to aid those wishing to practice the present invention. The practice of the present invention is not, however, limited to those exemplified compounds.
Cell adhesion is required for certain normal physiological functions. Yet, there are situations in which cell adhesion is undesirable, or in which modulated cell adhesion is desirable. Many pathologies exist which are related to abnormal cellular adhesion. These include, but are not limited to, rheumatoid arthritis, asthma and allergies, adult respiratory distress syndrome (ARDS) , AIDS, cardiovascular disease thrombosis or harmful platelet aggregation, reocclusion following thrombolysis, allograft rejection, reperfusion injury, psoriasis, eczema, contact dermatitis and other skin inflammatory diseases, osteoporosis, osteoarthritis, atherosclerosis, neoplastic disease including metastasis of neoplastic or cancerous growth, treatment of certain eye diseases such as detaching retina, Type I diabetes, multiple sclerosis, systemic lupus erythematosus (SLE) , inflammatory and immunoinflammatory conditions including ophthalmic inflammatory conditions and inflammatory bowel disease (e.g., ulcerative colitis and regional enteritis), and other autoimmune diseases.
Altered leukocyte-endothelial interactions are implicated in a number of inflammatory diseases where inappropriate attachment of leukocytes leads to further injury of affected tissue. In vi tro results show that such detrimental attachment, in which the leukocyte adheres to endothelial cells or to the extracellular matrix, is mediated by integrin receptors on the leukocyte. In this situation, peptides or other compounds with a binding affinity to integrin receptors are desirable as competitive antagonists and will be useful in treating inflammatory diseases including ARDS, asthma and rheumatoid arthritis.
When insufficient cell adhesion occurs wound healing is undesirably prolonged. A peptide or other compound with suitable affinity for integrin receptors when attached, for example, to a suitably positioned matrix or surface, may be able to promote beneficial cell adhesion and resultant enhancement of wound healing.
Cell adhesion also contributes to metastasis of cancerous tumors. Metastasis has been called "the major underlying cause of death from cancer." (Welch, et al., Intern. J. Cancer. 43. 449 (1989)). EBV-transformed cells have been shown to have increased levels of ICAM-1 expression (Dustin et al. , J. Immunol. , 137. 245 (1986)) . Compounds which can modulate integrin mediated adhesion will be useful in the prevention and treatment of cancer metastases from tumors. These compounds could be included as part of a chemotherapeutic regime against tumors to prevent possible metastases from the primary tumor.
Increased ICAM and VCAM expression can be seen at post-capillary venuole sites. This increased expression has been suggested to play a role in increased risk of arterial blockage from increased cellular adhesion at these sites. Compounds which effect ICAM and VCAM interactions with integrins should be useful in treatment of this type of arterial blockage.
The cellular infiltration associated with graft rejection has been shown to correlate with an increased expression of both ICAM and VCAM expression (Koster and McGregor, J. Ex . Med.. 133. 400 (1971) ; Pelletier et al., J. EXP. Med.. 149. 2473 (1992)). Anti-ICAM antibodies are immunosuppressive in monkeys and aid in preventing graft rejection (Wee et al. Trans. Proc.. 23. 279 (1991)) . Compounds, such as the ones encompassed by this invention are expected to be useful as immunosuppressives for preventing graft rejection. They should also have the advantage over antibodies of being less antigenic in vivo because of their small size and structural design.
The cell adhesion modulation compounds of the present invention are represented in part by amino acid sequence formulas wherein the individual amino acids are represented by their standard three-letter abbreviations, or alternatively, they are represented by one-letter abbreviations as indicated in the following Table of Abbreviations. Table of Abbreviations
Amino Acids
Name Abbreviations*
Glycine Gly G
Alanine Ala A
Valine Val V
Leucine Leu L
Isoleucine He I
Methionine Met M
Phenylalanine Phe F
Proline Pro P
Serine Ser S
Threonine Thr T
Cysteine Cys C
Asparagine Asn N
Glutamine Gin Q
Tyrosine Tyr Y
Tryptophan Trp W
Aspartic acid Asp D
Glutamic acid Glu E
Histidine His H
Lysine Lys K
Arginine Arg R
*Where such abbreviations for amino acids are used without an indication of enantiomeric structure, either the - or D-enantiomers or a mixture of the L- or D- enantiomers may suitably be utilized.
Amino acids of the peptide backbone are delineated with hyphens; synthetic amino acids, unnatural amino acids, and amino acid mimetics are enclosed in parentheses; the R1-R5 groups which are attached to the backbone amino acid groups are enclosed in parentheses and are immediately adjacent to the amino acid to which they are attached without an intervening hyphen. Additional abbreviations used herein include the following:
Ac: Acetyl
Abu: 4-Aminobutyric acid Acm: Acetamidomethyl
Ada: 1-adamantylacetyl
NH-Ada: 1-adamantylamino
Aib: α-aminoisobutyric acid jβ-Ala: jβ-alanine (3-aminopropionic acid) jS-Asp: jβ-aspartic acid
AnC: 6-aminocaproic acid
ARDS: Adult Respiratory Distress Syndrome
BCECF-AM: 2' ,7'-bis- (2-carboxyethyl) -5- (and -6)- carboxyfluorescein, acetoxymethyl ester, Molecular Probes Cat. No. B-1170
Biotinyl: [3aS- (3aα, 4/3, 6aα) ] -5- [Hexahydro-2-oxo- lH-thieno[3,4-d]imidazol-4-yl].valeryl
Boc: tert-butoxycarbonyl
BSA: bovine serum albumin Cha: 3-Cyclohexyl-2-aminopropionic acid
CHAc: cyclohexylacetyl
CTL: cytotoxic T-lymphocyte
DCC: dicyclohexylcarbodiimide
DCM: dichloromethane DIEA: diisopropylethylamine
DMAP: p-dimethylaminopyridine
DMF: dimethylformamide
Dpr: 2,3-diaminopropionic acid
9-FAc: 9-Fluorenylacetyl 1-FCA: 1-Fluorenecarbonyl
9-FCA: 9-Fluorenecarbonyl
5-Fine: 5-Fluoroindole-2-carbonyl
Fm: 9-Fluorenylmethyl
Fmoc: 9-Fluorenylmethoxycarbonyl FN: fibronectin
For: Formyl γ-Glu: γ-Glutamic acid
HBSS: Hank's Buffered Saline Solution
HF: hydrofluoric acid HOAc: acetic acid
HSA: human serum albumin
HUVEC: human umbilical vein endothelial cell
ICAM: intercellular adhesion molecule
IC50: inhibitory concentration, concentration at which adhesion is inhibited to 50% of control level
IL-1: interleukin 1
LFA-1: Lymphocyte Functional Antigen-1
Me: methyl MeOH: methanol
N-Me-Ala: N-methylalanine
Nα-Me-Arg: Nα-methylarginine
1-Nal: 1-Naphthylalanine[2-amino-3- (1-naphthyl) propionic acid] 2-Nal: 2-Naphthylalanine[2-amino-3- (2-naphthyl) propionic acid]
1-NaphAc: 1-Naphthylacetyl
2-NaphAc: 2-Naphthylacetyl 1-NaphCA: 1-Naphthalenecarbonyl
2-NaphCA: 2-Naphthalenecarbonyl l-NaphS02: 1-Naphthalenesulfonyl
2-NaphS02: 2-Naphthalenesulfonyl
Nle: Norleucine NorArg: Norarginine
(H2NC(=NH)NH(CH2)2CH(NH2)C02H)
NorVal: Norvaline
Orn: Ornithine
PBS: phosphate buffered saline Pen: penicillamine
(β, 3-dimethylcysteine)
PhAc: Phenylacetyl
PMA: phorbol myristate acetate
R.T. : room temperature (about 24°C) rTNF: recombinant Tumor Necrosis Factor
Sar: sarcosine
Ser(OMe) : O-methylserine
SLE: systemic lupus erythematosus
Su: succinyl TCA: 3-Thiomorpholinecarboxylic acid (Tetrahydro
-l,4-thiazine-3-carboxylic acid)
TFA: trifluoroacetic acid
ThioP: Thioproline(4-Thiazolidinecarboxylic acid)
Thr(OMe) : O-methylthreonine Tic: l,2,3,4-tetrahydroisoquinoline-3- carboxylic acid
TNF: Tumor Necrosis Factor
TTC: Tetrahydro-1,3-thiazine-4-carboxylic acid
Tyr(OMe) : O-methyltyrosine VCAM: vascular cell adhesion molecule
VLA: very late activation antigens
Xan: Xanthene-9-carbonyl
*: indicates participation of the amino acid in the cyclizing linkage The chemical structures of some of the above compounds and groups are shown below.
Figure imgf000016_0001
1-adamantylacetyl 1-adamantylamino
Figure imgf000016_0002
9-fluorenylacetyl
Figure imgf000016_0003
3 -cyclohexyl-2 aminopropionic acid
Figure imgf000016_0004
1-fluorenecarbonyl 9-fluorenecarbonyl
Figure imgf000017_0001
5-fluoroindole- 9-fluorenylmethyl -carbonyl
Figure imgf000017_0002
1- or 2-naphthylacetyl
9-fluorenylmethoxy- carbonyl
-
Figure imgf000017_0003
1- or 2- naphthalene 1- or 2- naphthalene carbonyl sulfonyl 2H
Figure imgf000018_0001
3-thiomorpholine- thioproline carboxylic acid
Figure imgf000018_0002
xanthene-9-carbonyl tetrahydro- 1 , 3 t h i a z i ne - 4 carboxylic acid
Figure imgf000018_0003
biotinyl
Figure imgf000019_0001
(X = halogen)
(X = halogen; p-halo-Phe
2,6-, 3,4-, or 3,5- dihalo-) dihalo-Phe
Figure imgf000019_0002
2H
(X = halogen) (X = halogen; 2,3- 2,5-, 2,6- or 3,5- - or m-halo-Tyr dihalo-) dihalo-Tyr A. Description of the Compounds
As discussed above, the present invention is directed to a compound of the formula (I)
R 1- (X°)r-
Figure imgf000020_0001
(X5)n- (X6)s (I)
In the formula (I) , R1 is a substituent on the - amino terminal group of the N-terminal amino acid. R1 is preferably a hydrogen atom, Ada, 1- or 2-NaphAc, 1- NaphS02, 2-NaphS02, 1-NaphCA, 2-NaphCA, 9-FAc, 1-FCA, 9-
FCA, PhAc, Ac, Fmoc, Xan, 5-Fine, biotinyl, Su and For.
In formula (I) , X° is an optional group, r is an integer of 0 or 1, and when present, X° is preferably
Trp, 1-Nal, 2-Nal, or an aromatic or hydrophobic amino acid, such as Tyr, Leu, Nle, He, Val, NorVal and Cha.
In formula (I) , X1 is an optional group, "m" is an integer of 0, 1 or 2 and when present, X1 is preferably a hydrophobic amino acid or a side chain-protected basic amino acid residue having a side chain terminal amino group with the formula -NHR2, where R2 is selected from the group consisting of a hydrogen atom, PhAc, 1-NaphAc, 2-NaphAc, Ada, 2-norbornylacetyl, 1-FCA, CHAc and For. Preferred moieties for X1 include Arg, Lys(R2), Gly, Nα- Me-Arg, Nle, Cha, Orn(R2) , Val, NorVal, Dpr(R2), Abu, Leu and He.
In formula (I) , X2 is selected from D- and L-/3-Asp and D- and L-γ-Glu and α-carboxyl esters or amides of any of these aforementioned amino acids. The carboxyl peptide linkages of jS-Asp and γ-Glu are formed between the side chain carboxyl groups (β-carboxyl or γ- carboxyl) of jS-Asp and γ-Glu, respectively, and the a- amino group of the adjacent amino acid. The α-carboxyl group of X2 may have the formula -C(0)R3, where R3 is -OR, -NHR or -NRR and where R is a hydrogen atom, a lower alkyl, an aryl, an arylalkyi, a cycloalkyi, a heteroaryl-lower alkyl or a heterocyclic group as appropriate for an amide or ester. More specifically, R may be methyl, Fm, benzyl, cyclohexyl, 1-adamantyl, 2-, 3- or 4-picolyl, 1- or 2-naphthylmethyl or isobutyl. When R3 is -OR and R is a hydrogen atom, -C(0)OH is present. Where R3 is -NHR or -NRR and R is a hydrogen atom, a carboxamide is present. Otherwise, for -NRR each R group may be selected independently of the other R group.
In formula (I) , X3 is an optional amino acid residue where "p" is an integer of 0 or 1. When present, preferred amino acids include Ser(R4) , Thr(R4) , Tyr(R4), Ala, Gly, Lys(R4), Orn(R4), Dpr(R4), N-Me-Ala, Aib, Val, Tic, o- and m-halo-Tyr, dihalo-Tyr, p-halo- Phe, dihalo-Phe, Sar, Leu, He, Nle and Cys(R4) . In formula (I) , X4 is an optional amino acid, where "q" is an integer of 0 or 1. When present, preferred amino acids include Pro, ThioP, Aib, Asn, TCA, TTC, Sar, N-Me-Ala, other N-methylated natural amino acids, Tic and pipecolinic acid (homoproline) . In formula (I) , X5 is optional and "n" is an integer of 0, 1, 2 or 3. In formula (I), X6 is optional and "s" is an integer of 0 or 1. Preferred groups for X5 and/or X6 include a side chain-protected derivative of a basic amino acid residue having a side chain terminal amino group with the formula -NHR4; a side chain-protected derivative of an acidic amino acid residue having a side chain terminal carboxyl group with the formula -C(0)R4, where R4 is -OR, -NHR or -NRR; Ser(R4) , Thr(R4) , Tyr(R4) , and R4 is a substituent of the hydroxyl group; and Cys(R4) and R4 is a substituent of the sulfhydryl group. Other preferred groups for X5 and/or X6 include Ala; Asp(R4) ; Glu(R4) ; Ser(OMe) ; Thr(OMe) ; Tyr(OMe) ; Gly; Abu; AnC; Leu; Val; β-Ala; Lys(R4); Dpr(R4); Orn(R4), He and Nle. On X3, X5 or X6, R4 is a substituent of a terminal amino group of a side chain of a basic amino acid, of a β- or γ-carboxylic group of an acidic amino acid, of a side chain hydroxyl group of Ser, Thr, Tyr or of a hydroxyl containing derivative or analog of Ser, Thr or Tyr or of a sulfhydryl group of Cys or of a sulfhydryl containing derivative or analog of Cys . When X5 and/or X6 is a residue of an acidic amino acid or mimetic thereof, the terminus of the side chain may be represented by the formula -C(0)R4 and R4 is -OR, -NHR or -NRR, wherein R may be a hydrogen atom, a lower alkyl, an aryl, an arylalkyi, a cycloalkyi, a heteroaryl-lower alkyl or a heterocyclic group as is appropriate for an amide or ester functional group. More specifically, R may be benzyl, cyclohexyl, 1- or 2- naphthylmethyl, 2-, 3- or 4-picolyl, 1-adamantyl, Fm, isobutyl or methyl. Where R4 is -OR and R is H, the side chain terminal functionality -C(0)OH, is present. Where R4 is NHR or NRR and R is H, a carboxamide is present. Otherwise, for -NRR, each R group may be selected independently of the other R group.
When X3, X5 or X6 is Ser(R4) , Thr(R4) or Tyr(R4) , R4 is a substituent of the hydroxyl group and may be a hydrogen atom, a lower alkyl, a cycloalkyi, a cycloalkyi-lower alkanoyl, an aryl, an arylalkyi, an aryloxycarbonyl, an arylcarbonyl, a heteroaryl-lower alkyl, an arylacetyl, a heterocyclic group, a lower alkanoyl, or an arylalkoxycarbonyl. More specifically, R4 may be methyl, benzyl, cyclohexyl, 1- or 2- naphthylmethyl, Fm, 2-, 3- or 4-picolyl or isobutyl. If R4 is a hydrogen atom, a hydroxyl side chain is present.
When X3, X5 or X6 is a residue of a basic amino acid, the terminal group of the side chain may be denoted by the formula -NHR4. Preferred groups for R4 include a hydrogen atom, lower alkyl, aryl, aryloxycarbonyl, arylcarbonyl, arylacetyl, an arylalkyi, an arylalkoxycarbonyl, a lower alkanoyl, cycloalkyi, and cycloalkyi-lower alkanoyl. More specifically, R4 may be cyclohexyl, 1- and 2-naphthylmethyl, Fmoc, 1-FCA, 9-FCA, Ada, Ac and 9-FAc. When R4 is a hydrogen atom, an amino terminus of the side chain is present.
When X3, X5 or X6 is Cys(R4) or a sulfhydryl side chain- containing analog or derivative of Cys, R4 is a substituent of the sulfhydryl group and is a hydrogen atom, a lower alkyl, an arylalkyi, an aryl, a cycloalkyi, a cycloalkyi-lower alkanoyl, an aryloxycarbonyl, an arylcarbonyl, an acetamido-lower alkyl, an arylacetyl, a heterocyclic group, a lower alkanoyl, or an arylalkoxycarbonyl. More specifically, R4 is preferably methyl, benzyl, 1- or 2-naphthylmethyl, cyclohexyl, Fm, Acm, 4-methylbenzyl or Ada. R4 is preferably not a hydrogen atom; however, where R4 is a hydrogen atom, a sulfhydryl terminal group of the side chain is present.
When X5 and/or X6 is the C-terminal amino acid residue, the α-carboxyl group may be represented by the formula -C(0)R5, where R5 is -OR, -NHR, or -NRR and R is a hydrogen atom, a lower alkyl, an arylalkyi, an aryl, a cycloalkyi, a heteroaryl-lower alkyl or a heterocyclic group as is appropriate for an amide or ester functional group. More specifically, R may be methyl, Fm, isobutyl, benzyl, cyclohexyl, 1- or 2-naphthylmethyl, 1- adamantyl or 2-, 3- or 4-picolyl. If R5 is -OR and R is H, an α-carboxyl terminus, -C(0)OH, is present. Where R5 is -NHR or -NRR and R is H, a carboxamide is the C- terminus of the peptide. For -NRR, each R group may be selected independently of the other R group.
R1-R5, where present, are preferably each independently selected so as to enhance the specific activity of the resulting compound and/or to preserve the compound against metabolism in the in vivo environment and to increase the effective half-life of the compound. In this regard, the use of one or more groups for X°-X6, particularly at the N-terminal position or in other regions in the compound, promotes the activity of the compound. In formula (I) , a bridge is formed via a cyclizing moiety, Z, between L1 and L2. L1 and L2 are each, or together, residues of amino acids or amino acid mimetics having functional groups suitable for the formation of a cyclizing bridge between L1 and L2.
L1 and L2 are chosen so that each contains a functional group which contributes to the formation of the cyclizing bridge moiety, Z. Thus, Z is formed from functional groups contributed by L1 and L2 and may also contain additional atoms and spacer groups. As is discussed in more detail below, preferred functional groups include thiol, amino and carboxyl groups. Such functional groups may be borne on the side chain of amino acids or amino acid mimetics, or may constitute the α-amino group (in L1) or terminal-carboxyl group (in L2) thereof.
Preferred moieties for L1 and L2 are Cys, Cys-NH2
(only for L2 and when no X5 or X6 groups are present) ,
Arg (only for L1 and when X° or X1 are absent) , Pen, Orn, Lys, Dpr, Gly (only for L1 and when X° or X1 are absent) , Met, Glu and Asp.
In preferred embodiments of the invention, L1 and L2 are each selected from Cys or Pen. Both Cys and Pen contain a sulfhydryl group and thus, the bridging cyclization can be accomplished by oxidative coupling of the sulfhydryls to form a disulfide bond between residues L1 and L2. In such a case, the cyclizing moiety, Z, is a covalent bond between the two sulfur atoms. This may be depicted generally for compounds wherein, both L1 and L2 are Cys residues as follows:
(S) (S)
R1-(X°)r-(X1)m-Cys-X2-(X3) -(X4) -Cys-(X5)n-(X6)s (II)
wherein (as with other similar depictions used herein) the functional group portion (here a side chain sulfur atom in both instances) appears in parentheses above the residue having the functional group.
Particularly preferred embodiments are those where
L1 is Cys and L2 is Cys. The cyclizing moiety may also be formed by a hydrocarbon moiety, for example a (poly)methylene bridge moiety of the form - (CH2) - where y is an integer from
1 to 8, preferably 1 to 4. One type of such a bridge is represented below, wherein a cyclic compound is formed with methylene residues, representing Z, between two cysteine side-chain sulfur atoms (representing L1 and
L2) . (See, L. Fieser et al., "Reagents for Organic
Synthesis", Vol. 1, pp. 356-357, J. Wiley and Sons:
(1967); Fieser, J. Amer. Chem. Soc.. 96. 1945 (1959)).
(S) (CH2)V (S)
R1- (X°)r- (X1)m-C Iys-X2-(X3)p-(X4)q-CIys- (X5)n- (X6)s (III)
In another preferred embodiment, L1 and L2 may be chosen from other natural or synthetic, - or D-amino acids or amino acid mimetics which provide a side chain or an amino- or carboxyl-terminus suitable as a functional group, for the formation of a cyclizing moiety. For example, L2 may be selected from Asp, Glu, or other natural or synthetic amino acids which provide a suitable side chain carboxyl group for cyclic linkage, through formation of an amide bond in a condensation reaction, with an amino group (e.g., an Nα-amino group, or an ω side chain amino group as on, for example, Lys or Orn) on L1. The cyclizing moiety Z may be a simple amide bond between L1 and L2.
Or, an amino acid residue L2 may provide an α- carboxyl group from its carboxyl terminus for amide linkage with either a side chain amino or α-amino group on L1; the direction of the amide linkage may also be reversed where L1 provides a side chain carboxyl group and L2 provides a side chain amino group. Such structures are exemplified as follows: ( eNH) ( SC=0)
R1- (X°) r- (X1) m-Lys-X2 - (X3 ) p- (X4 ) q-Asp- (X5 ) n- (X6 ) s ( IV)
wherein the side chain amino and carbonyl groups of L1 (Lys) and L2 (Asp) are directly bonded (IV) ;
(/3C=0) (eNH)
R1- (X°) r- (X1)m-Asp-X2- (X3)p- (X4)q-Lys- (X5)n- (X6) s (V)
wherein amide bond direction (from side chains of L1 and L2) is reversed (V) ;
(αNH) (/8C=0)
L^-X2- (X3)p- (X4)q-Asp- (X5)n- (X6) s (VI)
or
(eHN) (αC=0)
R1- (X°)r- (X1)m-Lys-X2- (X3)p- (X4)q-L2 (VII)
wherein the depicted amino terminus of L1 is directly bonded to the side chain carboxyl group of Asp (L2)
(VI) , or the depicted α-carboxyl terminus of L2 is directly bonded to the side chain amino group of Lys
(L1) (VII) ;
(αNH) (αC=0)
L1-X2-(X3)p-(X4)q-L2 (VIII) wherein the depicted α-amino terminus at L1 is directly bonded to the depicted carboxyl terminus at L2, such that an amide bond is formed in the peptide "backbone" of the compound (VIII) .
The cyclizing bridge between L1 and L2 may also be formed via a monosulfide (thioether) linkage, as exemplified below. In this regard, see, Palmer et al., in "Peptides--Chemistry, Structure, Biology", pp. 616- 618, Rivier & Marshall, Ed., Escom. Leider (1990) ; and Jung, op. cit., pp. 865-869. O
II
(HN) C-CH, (S )
I I R1 - (X0 ) r- (X1 ) m-L1 -X2 - (X3 ) p- (X4 ) q-L2 - (X5 ) n- (X6 ) s ( IX)
If L2 is the C-terminal amino acid of the compound and the α-carboxyl group is not utilized in the cyclization of the compound, the α-carboxyl group may be represented as -C(0)R5 where R5 is -OR, -NHR or -NRR and R is H, a lower alkyl, an aryl, an arylalkyi, a cycloalkyi, a heteroaryl-lower alkyl or a heterocyclic group as is appropriate for an amide or ester functional group. More specifically, R may be methyl, benzyl, cyclohexyl, 1- or 2-naphthylmethyl, 1-adamantyl, Fm, 2-, 3- or 4- picolyl or isobutyl. If R5 is -OR and R is H, the α- carboxyl group, -C(0)OH, is present on L2. Where R5 is - NHR or -NRR and R is H, the carboxamide is present. Otherwise, each R group in -NRR may be selected independently of the other R group. Other means of cyclization through appropriate choices of L1, L2 and Z will be readily recognized by those of ordinary skill in the art and are included in the scope of the present invention. Synthetic amino acid residues may also be utilized for L1 or L2, as for example, homologues wherein a side chain is lengthened or shortened while still providing the sulfhydryl carboxyl, amino or other reactive functional group for cyclization.
The foregoing discussion of cyclizing moieties (Z) , bridging residues (L1 and L2) , substituents, synthetic amino acids, amino acid mimetics, cyclization methods, and the like are applicable to the other structural formulas discussed hereinafter.
The preferable compounds are compounds of the formula (I) wherein L1 and L2 are each or together selected from the group consisting of Cys, Cys-NH2 (only for L2 and when no X5 or X6 groups are present) , Arg (only for L1 and when X° and X1 are absent) Pen, Orn, Lys, Dpr, Gly (only for L1 and when X° and X1 are absent) , Met, Glu and Asp;
Z is selected from a single bond, a lower alkylene or formula: -C0CH2-;
X° is selected from the group consisting of Trp, 1- Nal, 2-Nal, Tyr, Leu, Nle, He, Val, NorVal and Cha;
X1 is selected from the group consisting of Lys(R2) , Gly, Nα-Me-Arg, Nle, Cha, Val, NorVal, Dpr(R2), Arg, Orn(R2), Leu, He and Abu;
R2 is selected from a hydrogen atom, Ada, 2- norbornylacetyl, 1-FCA, 1-NaphAc, 2-NaphAc, PhAc, For or CHAc;
X2 is selected from the group consisting of β-Asp and jβ-Asp(R3), γ-Glu and γ-Glu(R3) and R3 is -OR, -NHR or -NRR and where R is a hydrogen atom, a lower alkyl, an aryl, an arylalkyi, a cycloalkyi, a heteroaryl-lower alkyl or a heterocyclic group; and
X5 and/or X6 is selected from the group consisting of Ala; Asp(R4) and Glu(R4) wherein R4 is a substituent of the derivatized side chain terminal carboxyl group and is selected from the group consisting of -OR, -NRR and -NHR where R is selected from the group consisting of a hydrogen atom, a lower alkyl, an aryl, a cycloalkyi, a heteroaryl-lower alkyl, a heterocyclic group and an arylalkyi; Ser(R4) , Tyr(R4) and Thr(R4) wherein R4 is OR and R is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, an aryl, an arylalkyi, a cycloalkyi-lower alkanoyl, an aryloxycarbonyl, an arylcarbonyl, a heteroaryl-lower alkyl, an arylacetyl, a heterocyclic group, a lower alkanoyl and an arylalkoxycarbonyl; Gly;
Abu; Lys(R4) ; Dpr(R4) and Orn(R4) wherein R4 is a substituent of the derivatized side chain terminal amino group and is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, a lower alkanoyl, an arylalkyi, an arylalkoxycarbonyl, an aryl, an aryloxycarbonyl, an arylcarbonyl, a cycloalkyi-lower alkanoyl and an arylacetyl; AnC; Leu; Val; He; Nle; β- Ala and Cys(R4) wherein R4 is a substituent of the derivatized side chain sulfhydryl group expressed as -SR and R is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, an acetamido-lower alkyl, an aryl, an arylalkyi, an aryloxycarbonyl, an arylcarbonyl, an arylacetyl, a heterocyclic group, a lower alkanoyl, an arylalkoxycarbonyl and a cycloalkyi-lower alkanoyl.
Among the above preferable compounds, more preferable ones are those wherein R1 is selected from the group consisting of hydrogen, Xan, 9-FAc, 9-FCA, 1-
FCA, Ac, 2-NaphAc, Ada, 5-Finc, biotinyl, Su, 1-NaphCA, For, 1-NaphAc, PhAc, l-NaphS02, 2-NaphS02 and 2-NaphCA.
Among the above more preferable compounds, most preferable ones are those wherein p is an integer of 1.
Other preferable compounds are compounds of the formula (I) wherein Z is selected from a single bond, a lower alkylene or a group of the formula: -C0CH2-;
R1 is selected from hydrogen, 1-FCA, 9-FAc, Ada, 5- Finc, Ac, Biotinyl, 9-FCA, Fmoc, For, 1- or 2-NaphAc, PhAc, l-NaphS02, 2-NaphS02, 1- or 2-NaphCA, Xan or Su; X° is selected from the group consisting of Trp, 1- Nal, 2-Nal, Tyr, Leu, Nle, He, Val, NorVal and Cha; r is an integer of 0 or 1;
X1 is selected from Arg, Nα-Me-Arg, Lys, Lys (Ada) , Lys (1-NaphAC) , Lys (PhAc), Lys(For), Lys (2-NaphAc) , Orn, Orn(PhAc), Gly, Nle or Cha; m is an integer of 0 or 1;
L1 is selected from Cys, Lys, Pen, Orn or Dpr;
X2 is selected from 3-Asp or β-Asp(αOFm) ;
X3 is selected from Ser, N-Me-Ala, Gly or Ala; X4 is selected from ThioP, Asn, TCA, Pro, Aib or Tic;
L2 is selected from Cys, Cys-NH2 (only when no X5 or X6 groups are present) , Asp, Pen or Glu; X5 is selected from Ala, Gly, Abu or Lys(Fmoc) ; and
X6 is selected from Asp- (OFm) , Asp- (NH-Ada) , Ser, Lys, Lys(Fmoc) -NH2 or Gly.
Among the above preferable compounds, more preferable ones are those wherein R1 is selected from a hydrogen atom, l-FCA, 9-FAc, Ada, 5-Fine, Ac, Biotinyl, 9-FCA, For, 9-FAc, 2-NaphAc, PhAc, l-NaphS02, 2-NaphS02, 2-NaphCA or Xan.
Among the above more preferable compounds, most preferable ones are those wherein p is an integer of 1. Other preferable compounds are compounds of the formula (I) wherein
Z is selected from a single bond, a lower alkylene or a group of the formula: -COCH2-;
R1 is selected from hydrogen, l-FCA, 9-FAc, Ada, 5- Fine, Ac, Biotinyl, 9-FCA, Fmoc, For, 9-FAc, 2-NaphAc, PhAc, 2-NaphCA or Xan;
X° is Trp; r is an integer of 0 or 1;
X1 is selected from Arg, Nα-Me-Arg, Lys, Lys(Ada), Lys(1-NaphAc) , Lys(PhAc) , Lys(For), Lys(2-NaphAc) , Orn, Orn(PhAc), Gly, Nle or Cha; m is an integer of 0 or 1;
L1 is selected from Cys, Lys or Pen;
Figure imgf000030_0001
X3 is selected from Gly or Ala;
X4 is selected from ThioP, Asn, Pro or Tic;
L2 is selected from Cys, Cys-NH2 (only when no X5 or X6 groups are present) , Asp or Pen;
X5 is selected from Ala, Gly, Abu or Lys(Fmoc) ; and X6 is selected from Asp- (OFm) , Asp- (NH-Ada) , Ser, Lys, Lys(Fmoc) -NH2 or Gly. Among the above preferable compounds, more preferable ones are those wherein
R1 is selected from a hydrogen atom, l-FCA, 9-FAc, Ada, 5-Finc, Ac, Biotinyl, 9-FCA, For, 9-FAc, 2-NaphAc, PhAc, l-NaphS02, 2-NaphS02, 2-NaphCA or Xan.
Among the above more preferable compounds, most preferable ones are those wherein p is an integer of 1. Other preferable compounds are compounds of the formula (I) wherein Z is a single bond;
R1 is selected from l-FCA, 9-FAc, Ac or Xan; r is an integer of 0; X1 is selected from Arg or Lys; m is an integer of 1; L1 is Cys;
X2 is 3-Asp; p is an integer of 0; X4 is ThioP; q is an integer of 1; L2 is selected from Cys or Cys-NH2 (only when no X5 or X6 groups are present) ; n is an integer of 0; and s is an integer of 0.
Within a preferred group of structures are the following formulas:
X° in structure I is absent; X1 is Arg; X2 is jβ-Asp; X3 is absent; X4 is ThioP; and X5 and X6 are absent. In a preferred structure, the cyclizing Z moiety is formed by a disulfide linkage between L1 and L2 cysteine residues and the overall preferred sequence would be Arg-Cys*- (S-Asp) - (ThioP) -Cys* (* denotes residue involved in cyclization of compound) .
With the sequence Arg-Cys*- (/δ-Asp) - (ThioP) -Cys*, R1 is preferably l-FCA, 9-FAc, 9-FCA, Xan, For, Ac, Biotinyl, Ada, a hydrogen atom, 5-Finc, PhAc or Su.
Also preferred is a sequence wherein residue X° is absent, residue X1 is Lys; residue X2 is jS-Asp; X3 is absent; X4 is ThioP; and X5 and X6 are absent. Thus, the sequence Lys-Cys*- (/β-Asp) - (ThioP) -Cys* is also preferred, wherein the cyclizing Z moiety is formed by the disulfide linkage between the cysteine residues. In this preferred structure R1 is preferably l-FCA, 9-FCA or 9-FAc or Fmoc.
Another particularly preferred sequence is one wherein X° is absent; X1 is Arg; X2 is 3-Asp; X3 is absent; X4 is ThioP; and X5 is Ala, and n is 2 and X6 is absent. Thus, the sequence Arg-Cys*- (S-Asp) - (ThioP) - Cys*-Ala-Ala is also preferred, wherein the cyclizing Z moiety is formed by a disulfide linkage between the cysteine residues. In this preferred structure, R1 is preferably l-FCA, 9-FCA, 2-NaphAc, l-NaphS02, 2-NaphS02, 2-NaphCA, Ac or PhAc.
Another particularly preferred sequence is one wherein X° is absent; X1 is Lys; X2 is β-Asp; X3 is absent; X4 is ThioP; X5 is Ala and n is an integer of 2 and X6 is absent. Thus, the sequence Lys-Cys*- (β- Asp) - (ThioP) -Cys*-Ala-Ala is also preferred, wherein the cyclization of the peptide occurs through a disulfide linkage formed between the cysteine residues. With this preferred structure, R1 is preferably 9-FCA and R2 is PhAc. Another particularly preferred sequence is one wherein X° is absent; X1 is Arg; X2 is jS-Asp; X3 is absent; X4 is ThioP; X5 is Ala and X6 is Asp. Thus, the sequence Arg-Cys*- (8-Asp) - (ThioP) -Cys*-Ala-Asp is also preferred, wherein the cyclization is formed from the disulfide linkage of the two cysteines. With this preferred structure, R1 is preferably Ac and R4 is Ada or Fm.
Also preferred is a sequence wherein residue X° is absent; X1 is Orn; X2 is /3-Asp; X3 is absent; X4 is ThioP and X5 and X6 are absent. Thus, the sequence Orn-Cys*- (S-Asp) - (ThioP) -Cys* is also preferred, wherein the sulfhydryl linkages of the two cysteine residues cyclize the peptide. In this structure R1 is preferably l-FCA or Fmoc and the side chain terminal amino group of Orn is denoted as NHR2, and R2 is preferably hydrogen or PhAc. Another particularly preferred sequence is one wherein X° is absent; X1 is Arg; X2 is /S-Asp; X3 is absent; X4 is ThioP; X5 is Ala and X6 is Ser. Thus, the sequence Arg-Cys*- (S-Asp) - (ThioP) -Cys*-Ala-Ser is also preferred, wherein the peptide is cyclized by a disulfide linkage of the cysteine residues. In this structure, R1 is preferably l-FCA.
Another particularly preferred sequence is one wherein X° is absent; X1 is Lys; X2 is /β-Asp; X3 is absent; X4 is TCA; and X5 and X6 are absent. Thus, the sequence Lys-Cys*- (/S-Asp) - (TCA) -Cys* is also preferred, wherein the peptide is cyclized by a disulfide linkage of the cysteine residues. In this structure, R1 is preferably Fmoc, 9-FAc, 9-FCA or l-FCA, the e-amino terminal group of Lys is denoted as NHR2 and R2 is preferably H, 1-NaphAc, 2-NaphAc or PhAc.
Another particularly preferred sequence is one wherein X° is absent; X1 is Lys; X2 is /8-Asp; X3 is absent; X4 is Pro; X5 and X6 are absent. Thus, the sequence Arg-Cys*- (/3-Asp) -Pro-Cys* is also preferred, wherein the peptide is cyclized by a disulfide linkage of the cysteine residue. In this structure, R1 is preferably Fmoc, 9-FAc, 9-FCA or l-FCA.
Another particularly preferred sequence is one wherein X° is absent; X1 is Arg; X2 is /β-Asp; X3 is absent; X4 is absent and X5 and X6 are absent. Thus, the sequence Arg-Cys*- (/3-Asp) -Cys* is also preferred, wherein the cyclizing Z moiety is formed by a disulfide linkage between the cysteine residues. In this preferred structure, R1 is preferably l-FCA, 9-FCA, 9- FAc or Fmoc.
Another particularly preferred sequence is one wherein X° is absent; X1 is Arg; X2 is /S-Asp; X3 is absent; X4 is ThioP; X5 is Abu and X6 is absent. Thus, the sequence Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Abu is also preferred, wherein the cyclization of the peptide occurs through a disulfide linkage formed between the cysteine residues. With this preferred structure, R1 is preferably 9-FCA, l-FCA, 9-FAc or Fmoc.
Another particularly preferred sequence is one wherein X° is absent; X1 is Arg; X2 is /S-Asp; X3 is absent; X4 is ThioP; X5 is Ala and X6 is absent. Thus, the sequence Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala is also preferred, wherein the sulfhydryl linkages of the two cysteine residues cyclize the peptide. In this structure, R1 is preferably l-FCA.
Another particularly preferred sequence is one wherein X° is absent; X1 is Arg; X2 is /3-Asp; X3 is absent; X4 is ThioP; X5 is Gly and n is an integer of 2 and X6 is absent. Thus, the sequence Arg-Cys*- (β- Asp) - (ThioP) -Cys*-Gly-Gly is also preferred, wherein the cyclizing Z moiety is formed from the disulfide linkage of the cysteine residues. In this structure, R1 is preferably l-FCA, 9-FCA, 9-FAc or Fmoc.
Another particularly preferred sequence is one wherein X° is absent; X1 is Lys; X2 is /8-Asp; X3 is absent; X4 is ThioP; X5 is Ala and X6 is Ser. Thus, the sequence Lys-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ser is also preferred, wherein the cysteine residues are joined by a disulfide linkage. In this structure, R1 is preferably l-FCA or 9-FCA, the e-amino terminal group of Lys is denoted as NHR2 and R2 is preferably H, 2-NaphAc, 1-NaphAc or PhAc.
Also preferred is a sequence wherein residue X° is absent; X1 is Arg; X2 is /3-Asp; X3 is absent and X4 is ThioP; X5 is Ala and X6 is Lys. Thus, the sequence Arg- Cys*- (jS-Asp) - (ThioP) -Cys*-Ala-Lys is also preferred, wherein the cysteine residues cyclize the compound by forming a disulfide linkage. With this structure R1 is preferably 2-NaphAc or 9-FAc. Throughout the present specification and claims, amino acids are those from natural or non-natural sources and are those having at least one amino group and one carboxyl group in a molecule. Those amino acids include amino acids from natural sources or antipodes thereof, D- or L-enantiomeric amino acids, and racemic mixtures of these amino acids. α-Amino acids or /3-amino acids are the preferred examples and may be either one of neutral, acidic, and basic amino acids. As the basic amino acids, there may be mentioned amino acids having plural amino groups or a guanidino group or an imidazolyl group such as arginine, histidine, ornithine, lysine, and the like; as the acidic amino acids, there may be mentioned amino acids having plural carboxyl groups such as glutamic acid, aspartic acid, and the like; and as the neutral amino acids, there may be mentioned amino acids having the same number of amino groups and carboxyl groups such as alanine, isoleucine, leucine, and the like. Further, in the present invention, specific examples of the amino acids which can be used suitably, include glycine, alanine, N-methylalanine, N-α-methylarginine, isoleucine, leucine, valine, norvaline, glutamic acid, methionine, phenylalanine, proline, 8-alanine, arginine, norarginine, ornithine, serine, 0-methylserine, threonine, O-methylthreonine, asparagine, aspartic acid, jS-aspartic acid, glutamine, γ-glutamine, cystine, cysteine, tyrosine, O-methyltyrosine, histidine, tryptophan, lysine, homoarginine, γ-glutamic acid, sarcosine, creatine, homocysteine, norleucine, isoserine, homoserine, norvaline, ornithine, penicillamine, sarcosine, 3-cyclohexyl-2-aminopropionic acid, 2,3-diaminopropionic acid, thioproline, piperidylcarboxylic acid, α,γ-diaminobutyric acid, α- aminoisobutyric acid, /S-aminobutyric acid, 4- aminobutyric acid, 6-aminocaproic acid, 1,2,3,4- tetrahydroisoquinoline-3-carboxylic acid and the like. Amino acid mimetics are derivatives of the above amino acids. Specific examples of those which can be used suitably, include ester thereof (e.g., a lower alkyl ester, aryl ester), amide thereof (e.g., unsubstituted amide, a cyclohexylamide) or derivative of proline (e.g., thioproline, 3-thiomorpholinecarboxylic acid, tetrahydro-1,3-thiazine-4-carboxylic acid, homoproline, hydroxyproline) and the like.
An aryl group, an aryl moiety in the arylalkyi, aryloxycarbonyl, arylcarbonyl, arylacetyl or arylalkoxycarbonyl is preferably an aromatic hydrocarbocyclic group containing 1 to 4 rings, such as phenyl group, naphthyl group, and the like. A heteroaryl group is preferably an aromatic group containing 1 or 2 rings wherein at least one of the rings contains at least 1, preferably 1 to 3, more preferably 1 or 2 heteroatoms such as N, 0 or S wherein the remainder of the ring atoms are carbon atoms, wherein each ring contains 4 to 7 ring atoms, with a total of 4 to 11 ring atoms where two fused rings are present. For example, a heteroaryl group is a 5- or 6- membered aromatic heterocyclic group such as thienyl group, furyl group, pyridyl group, pirazinyl group, pyrimidinyl group, and the like. The above aryl and/or heteroaryl group may have one to three substituents and as the substituent, there may be mentioned a halogen atom, a lower alkyl group and a lower alkoxy group.
As used hereinabove, a lower alkyl group is preferably a C^Cg alkyl group, more preferably a C-_-C5 alkyl group, a lower alkanoyl group is preferably a C1-C9 alkanoyl group, more preferably a C-j^-C8 alkanoyl group, a lower alkoxy group is preferably a C1-C8 alkoxy group, more preferably a C1-C5 alkoxy group, aryl is preferably a C6-C17 aryl group (containing 1 to 4 rings) , more preferably a C8-C12 aryl group (containing 1 or 2 rings) and most preferably is an aromatic hydrocarbocyclic group containing 1 or 2 rings, such as a phenyl group, naphthyl group and the like, arylalkyi is preferably a C6-C17 or C6-C12 aryl group (containing 1 or 2 rings) as defined above substituted with a lower alkyl group (as defined above) with the total number of carbon atoms in the arylalkyi group preferably being between 7 and 15, cycloalkyi is preferably a C3-C17 cycloalkyi group (containing 1 or 2 cycloalkyi groups) , more preferably a C3-C12 cycloalkyi group, arylalkoxycarbonyl is preferably an aryl group as defined above substituted with a lower alkoxy group (as defined above) with the total number of carbon atoms in the arylalkoxy group preferably being between 8 and 16 and can include compounds wherein two aryl groups are connected by a cyclic hydrocarbon group, such as Fmoc, and aryloxycarbonyl is preferably an aryl group as defined above having an oxycarbonyl group attached to one of the ring carbon atoms (e.g. Aryl-O-C(O) -) , more preferably a C6-C13 aryloxycarbonyl (containing 1 or 2 rings) , arylcarbonyl is preferably an aryl group as defined above having a carbonyl group attached to one of the ring carbon atoms (e.g. Aryl-C(O)-) , more preferably C7- C16 arylcarbonyl (containing 1 or 2 rings) , arylacetyl is preferably an aryl group as defined above having an acetyl group attached to one of the ring carbon atoms (e.g. Aryl-CH2-C(0) -) , more preferably a C8-C17 arylacetyl group (containing 1 or 2 rings) and heterocyclic is preferably a heterocyclic group containing l or 2 rings containing at least 1, preferably 1 to 3, more preferably 1 or 2 heteroatoms such as N, O or S wherein the remainder of the ring atoms are carbon atoms, wherein each ring is saturated or unsaturated and contains 4 to 7 ring atoms, with a total of 4 to 11 ring atoms where two fused rings are present. 2. Therapeutic Utility
In the practice of the therapeutic methods of the present invention, an effective amount of the active compound, including derivatives or salts thereof, or a pharmaceutical composition containing the same in combination with a pharmaceutical carrier or diluent, as described below, is administered via any of the usual and acceptable methods known in the art, either singly or in combination with another compound or compounds of the present invention or other pharmaceutical agents such as immunosuppressants, antihistamines, corticosteroids, and the like. These compounds or compositions can thus be administered orally, sublingually, topically (e.g., on the skin or in the eyes) , by inhalation, by suppository, or parenterally (e.g., intramuscularly, intravenously, subcutaneously or intradermally) , and in the form of either solid or liquid dosage including tablets, suspensions, and aerosols, as is discussed in more detail below. The administration can be conducted in single unit dosage form with continuous therapy or in single dose therapy ad libitum. A unit dose is defined as 1 to 3000 mg for a human patient.
Useful pharmaceutical carriers for the preparation of the pharmaceutical compositions hereof can be solids, liquids or mixtures thereof; thus, the compositions can take the form of tablets, pills, capsules, powders, enterically coated or other protected formulations (such as binding on ion exchange resins or other carriers, or packaging in lipid or lipoprotein vesicles or adding additional terminal amino acids) , sustained release formulations, erodible formulations, implantable devices or components thereof, microsphere formulations, solutions (e.g., ophthalmic drops), suspensions, elixirs, aerosols, and the like.
Water, saline, aqueous dextrose, and glycols are preferred liquid carriers, particularly (when isotonic) for injectable solutions. The carrier can be selected from various oils including those of petroleum, animal, vegetable or synthetic origin, for example, peanut oil, soybean oil, mineral oil, sesame oil, and the like. Suitable pharmaceutical excipients include starch, cellulose, talc, glucose, lactose, sucrose, gelatin, malt, rice, flour, chalk, silica gel, magnesium stearate, sodium stearate, glycerol monostearate, sodium chloride, dried skim milk, glycerol, propylene glycol, water, ethanol, and the like. The compositions may be subjected to conventional pharmaceutical expedients such as sterilization and may contain conventional pharmaceutical additives such as preservatives, stabilizing agents, wetting or emulsifying agents, salts for adjusting osmotic pressure, buffers, and the like. Suitable pharmaceutical carriers and their formulations are described in Martin, "Remington's Pharmaceutical Sciences", 15th Ed.; Mack Publishing Co., Easton (1975); see, e.g., pp. 1405-1412 and pp. 1461-1487. Such compositions will, in general, contain an effective amount of the active compound together with a suitable amount of carrier so as to prepare the proper dosage form for proper administration to the host.
In one preferred embodiment, the therapeutic methods of the present invention are practiced when the relief of symptoms is specifically required or perhaps imminent; in another preferred embodiment, the method hereof is effectively practiced as continuous or prophylactic treatment. In the practice of the therapeutic methods of the invention, the particular dosage of pharmaceutical composition to be administered to the subject will depend on a variety of considerations including the nature of the disease, the severity thereof, the schedule of administration, the age and physical characteristics of the subject, and so forth. Proper dosages may be established using clinical approaches familiar to the medicinal arts. It is presently believed that dosages in the range of 0.1 to 100 mg of compound per kilogram of subject body weight will be useful, and a range of 1 to 100 mg per kg generally preferred, where administration is by injection or ingestion. Topical dosages may utilize formulations containing generally as low as 0.1 mg of compound per ml of liquid carrier or excipient, with multiple daily applications being appropriate. The compounds and therapeutic or pharmaceutical compositions of the invention might be useful in the study or treatment of diseases or other conditions which are mediated by the binding of integrin receptors to ligands, including conditions involving inappropriate (e.g., excessive or insufficient) binding of cells to natural or other ligands. Such diseases and conditions might include inflammatory diseases such as rheumatoid arthritis, asthma, allergy conditions, adult respiratory distress syndrome, inflammatory bowel diseases (e.g., ulcerative colitis and regional enteritis) and ophthalmic inflammatory diseases; autoimmune diseases; and cardiovascular disease; prevention of occlusion following thrombolysis; neoplastic disease including metastatic conditions; as well as conditions wherein increased cell binding is desired, as in wound healing or prosthetic implantation situations, as discussed in more detail above.
The compounds of the present invention might find use in the diagnosis of diseases which result from abnormal cell adhesion. For example, excessive adhesion of leukocytes to endothelial cells or to exposed extracellular matrix in blood vessels has been implicated in early stages of atherosclerosis. Thus, a person demonstrating excessive binding of leukocytes to endothelial cells might be at risk for developing occluded arteries. One might detect this risk factor by measuring the binding of a compound of structure I to leukocytes and endothelial cells of the patient thought to be at risk.
Furthermore, the compounds of the present invention might find use in the diagnosis of autoimmune diseases caused by antibodies which bind to cell adhesion molecules or which bind to receptors for cell adhesion molecules. For example, if a disease is caused by antibodies binding to a cell adhesion molecule which is mimicked by a compound of structure I, then a diagnostic test for the presence of such antibodies is easily performed by immunoassay of blood or serum from a patient using a compound of structure I bound to a carrier so as to capture the antibodies. The bound antibody can be detected by the means typical of the art such as a labelled second antibody directed to the Fc portion of human antibodies or using labelled Fc-binding proteins from bacteria (protein A or protein G) . In the alternative situation, where the compound of structure I binds to the same receptor as the disease-causing antibody, a competitive immunoassay format can be used. In this format, the compound I is labelled and competition for binding to receptor protein attached to the substrate can be measured.
In addition, derivatives of the present compounds might be useful in the generation of antigens which are prepared by coupling the peptides to a carrier protein. Animals are then immunized with this complex thereby generating antibodies to the peptides. These antibodies will, in some cases, themselves be effective in inhibiting cell adhesion or modulating immune activity by acting as receptors for cell adhesion ligands, or, if anti-idiotypic, by acting to block cellular receptors.
Furthermore, the compounds of the present invention might be used to produce matrices for purifying substances which bind to the compounds of the present invention with high affinity. Such a matrix could be produced, for example, by covalently attaching a compound of the present invention to a derivatized chromatographic support. In one embodiment of this aspect of the invention, a cyclic peptide listed in Table 1 which contains a free amino group can be coupled to a cyanogen bromide activated chromatography resin, such as that available from Pharmacia, (Uppsala, Sweden, Cat. No. 52-1153-00-AK) . If necessary, an amino group can be introduced into the desired peptide, either by addition of a lysine residue, or by addition of another amine-containing residue. Alternatively, of course, carbodiimide-activated resin can be used in conjunction with cyclic peptides bearing free carboxyl functions.
The peptide is coupled using the protocol essentially as provided by the manufacturer. The cyclic peptide-derivatized resin can then be used to purify proteins, polysaccharides or the like which may bind the cyclic peptide with high affinity. Such a purification is accomplished by contacting the cyclic peptide- derivatized resin with a sample containing the compound to be affinity purified under conditions which allow formation of the specific complex, washing of the complex bound to the resin with a solution which removes unwanted substances, but leaves the complex intact, and then eluting the substance to be purified by washing the resin with a solution which disrupts the complex.
Compounds of the present invention are expected to be useful in the identification of binding sites of crystalline receptors or ligands. When co-crystallized with the receptor or ligand to be analyzed, these compounds should aid in the identification and structural mapping of relevant binding sites, as well as in the determination of conformational changes which may occur upon binding. Crystallographic analysis will also aid in the selection of compounds of the present invention to be used in pharmaceutical applications. EXAMPLES
Although any methods and materials similar or equivalent to those described herein can be used in the practice or testing of the present invention, the preferred methods and materials are now described. As set forth above, all publications to which reference is made are incorporated herein by reference.
EXAMPLE 1 SYNTHESIS AND FORMULATION OF COMPOUNDS The "backbones," i.e., the peptide-bond linked portions of the cyclic compounds of the invention were generally synthesized using solid phase peptide synthesis as depicted in Table 1, and then cyclized using a procedure in which, where necessary, the appropriate protecting groups were removed prior to cyclization. Other methods for synthesis and cyclization are known in the art and may be employed in the preparation of the cyclic compounds and formulations disclosed herein. Attachment of N-Boc-S- (4-methylbenzyl) -Cysteine (Boc-Cys- (4-MeBzl) to the chloromethyl polystyrene resin (Merrifield resin) was done in the presence of potassium fluoride (Horiki, Chem. Lett.. (#2), 166-168 (1978)).
General Procedures for Synthesis of Cyclic Peptides Peptide Synthesis: Boc-Cys(4-MeBzl) -polystyrene resin (for C-terminal carboxylic acids) or 4- methylbenzhydrylamine resin (for C-terminal carboxamides) was used for the stepwise assembly of the product peptides using the Boc amino acid procedure in Table 1. Related procedures can be found in the published International Patent Application WO 92/00995, which was previously incorporated by reference.
Following coupling of the last amino acid the N-terminal
Boc protecting group was removed by mixing the resin with TFA:DCM (1:1) for 20 minutes. Following rinsing in order with DCM (3X) , MeOH (2X) , DCM (3X) the resin was air dried.
When used in the peptide synthesis, TCA was obtained by the chemical synthesis procedures fully disclosed in the Published International Patent Application WO 94/15958. Those procedures are fully incorporated in their entirety into this application by reference.
Cleavage: The Boc-deprotected peptides on-resin were cleaved by stirring at -5 to 0°C with a cocktail of distilled anhydrous HF (10 ml/g resin) , anisole (1 ml/g resin) and dimethyl sulfide (0.5 ml/g resin) . After one hour, the HF was removed under reduced pressure. The cleaved peptide/resin mixture was washed three times with diethyl ether and then extracted with 80% aqueous acetic acid. The combined extracts (100 ml/g or 200 ml/2g resin) were pooled and carried on to the cyclization step.
Cyclization: The peptides were cyclized through the formation of an amide linkage, a disulfide linkage, a monosulfide linkage or a dithioether linkage, as appropriate.
Purification: The cyclic peptide was purified on a Waters Delta Prep 3000 system (Waters, Milford, Massachusetts) equipped with C18 reverse phase column (15-20 mm, 5X30 cm ID) , using a linear gradient of increasing acetonitrile concentration in 1.0% triethylammonium phosphate (TEAP, pH 2.3) as the mobile phase. The appropriate fractions were pooled to give the pure peptide as a phosphate salt. The peptide salt was applied again to the column and eluted with a linear gradient of increasing amounts of acetonitrile in 1.0% aqueous HOAc to afford the desired acetate salt form. Analysis: The purified peptides were analyzed using a Beckman System 126 (Detector module 166) , equipped with a Beckman C18 column (RPC18 Ultrasphere, 5 μm, 4.6 x 150 mm ID) . Elution was performed with buffer A = 0.1 M sodium phosphate in water, pH 4.4 - 4.5, buffer B = 60% acetonitrile in buffer A, using a linear gradient of buffer B and a flow rate of 1 ml/minute. The gradient was adjusted for each peptide, to provide elution of the peptide near the middle of the gradient.
TABLE 1
Schedule for Solid Phase Peptide Synthesis (TFA deprotection/DCC coupling)
Step Reacrent Vol*(ml) Time(min)
1 DCM wash (3X) 20 1/wash
2 TFA-DCM (1:1) 20 1
3 TFA-DCM (1:1) 20 20
4 DCM wash (3X) 20 l/wash
5 MeOH wash (2X) 20 1/wash
6 DCM wash (3X) 20 l/wash
7 5% DIEA-DCM (1:9) 20 1
8 5% DIEA-DCM (1:9) 20 5
9 DCM wash (4X) 20 1/wash
10 Boc AA (2.0 meg.) 120 in DCM <or DMF>**
11 DCC (2.0 meq.) 20 in DCM
12 Recouple if necessary ' by repeating steps 4-11
13 DCM wash (2X) 20 1/wash
14 50% CH3OH-DCM wash 20 1/wash
15 MeOH wash (2X) 20 l/wash
16 DCM wash (3X) 20 l/wash
17 25%(CH3CO)20-DCM 20 20
18 DCM wash (3X) 20 1/wash
19 MeOH wash (2X) 20 1/wash
20 DCM wash (3X) 2fJ 1/wash
* The volume given is for the synthesis using 0.5 meq./gm of growing peptide chain on two grams of resin.
DMF added where Boc-AA is insoluble in DCM alone.
Procedure A) Synthesis of Amide Linked Side Chain Cyclized Compounds
In this Example, the following compound was synthesized
(eHN) (αC=0)
(l-FCA) -L Iys- (/S-Asp) - (ThioP) -AIsp
All natural and synthetic amino acids and derivatives thereof were purchased from BACHEM
(Torrance, California) . l-FCA, DCC and diisopropylethylamine and 4- (dimethylamino) -pyridine
(DMAP) were obtained from Aldrich (Milwaukee,
Wisconsin) . Unless otherwise noted, other reagents were of analytical grade and used without further purification. All residues were linked by the solid phase method using Boc protection.
(1) Synthesis of protected K*(β-D) (ThioP)D* peptide sequence. Synthesis of the above peptide was performed using, in conjunction, an automated peptide synthesizer (System 990, Beckman Instruments, Inc., Palo Alto, California) and a manual peptide synthesis apparatus (S.C. Glass Tech, Bonica, California) . The following amino acids were used in the synthesis: Boc- (ThioP) , Boc-/8-Asp(α-O- benzyl) and Boc-Lys(Ne-Fmoc) . The N-Boc-L-α-Asp-/β- fluoromethyl ester was attached to the hydroxymethyl resin using DCC and DMAP as a catalyst (Fehrentz, J.A. and Castro B., Synthesis. 676-678 (1983)). Boc-L-α- Asp(OFm)OCH2-resin (1.0 g, 0.75 mmol) was used as the starting resin. Excess amino acid (2-3 fold) was used for each coupling. The peptide chain was constructed on the Beckman peptide synthesizer using Boc chemistry with the stepwise addition of each amino acid following the standardized cycle similar to that presented in Table 1, with adjustments for scale. 50% TFA in DCM, 5% DIEA in DCM, and 0.5 M of DCC in DCM were used as deprotecting, neutralizing, and activating agents, respectively, for each cycle.
(2) Synthesis of N-terminal derivatized peptides Following the removal of the Boc group from the N- terminal Lys with 50% TFA in DCM, the peptide on resin was washed with MeOH (2 x 1 min) and DCM (3 x 1 min) and neutralized with 5% DIEA in DCM (2 x 1 min) . The peptide was then washed with DCM (3 x 1 min) and reacted with l-FCA and DCC. Any unreacted amino groups were capped with acetic anhydride in DCM.
(3) General cyclization procedure for formation of the amide bridge.
The peptide was cyclized on the resin by forming an amide linkage between the β-carboxyl group of Asp and the e-amino group of Lys using the following general procedure.
Filtering was performed between each step: (l) MeOH
(2 x 1 min) ; (2) DCM (3 x 1 min) ; (3) 20% piperidine in
DMF, wash for 1 min, and deprotection for 20 min; (4) DMF (2 x 1 min) ; (5) MeOH (2 x 1 min) ; (6) DCM (3 x 1 min); (7) BOP reagent (4 equiv.) in DMF (20 ml/gram of resin) , stir for 2 min. and add DIEA (2% of DMF volume) , stir for 4 hrs (the completion of the cyclization reaction was monitored by the ninhydrin test; if the reaction was judged incomplete at 4 hrs, the reaction was continued until the ninhydrin test was negative) ; wash with (8) DMF (2 x 1 min) ; (9) DCM (2 x 1 min) ; (10) MeOH (2 1 min) .
The final cyclic compound was removed from the resin by treatment with HF in the presence of anisole for 1 hr at 0°C. After removal of the HF, in vacuo, the residue was washed with diethyl ether and the peptide was extracted from the resin with an aqueous HOAc solution. The aqueous extract was lyophilized to yield the crude peptide. (4) Purification
The compound was purified using a Waters Delta Prep 3000 system (Waters, Milford, MA) equipped with a C18 column, using a linear gradient of increasing acetonitrile concentration in TEAP (pH 2.2 to 2.4) as the mobile phase. The collected fractions of the pure compound were pooled and applied again to the C18 column. This time the sample was eluted with a linear gradient of increasing amounts of acetonitrile in 1.0% aqueous HOAc to convert the phosphate salt form of the peptide to the desired acetate form. The pure peptide fractions were pooled, concentrated in vacuo, redissolved in water and lyophilized to give a white powder.
These synthesis and purification procedures can also be applied to longer cyclic peptide sequences which contain a side chain-side chain cyclizing linkage.
Procedure B) Synthesis of Cyclic Disulfide Compounds
In this example, the following compound was prepared: (S) (S)
(l-FCA)-Arg-Cy Is-(/3-Asp) - (ThioP) -CyIs
All peptides were synthesized by the solid phase method with a Beckman automated peptide synthesizer
(System 990, Beckman Instruments, Inc., Palo Alto,
California) using Boc chemistry and HF cleavage as discussed above.
Following HF cleavage the peptide was cyclized using a standard iodine cyclization method. (E. Wϋnsch et al, Int. J. Peptide Res.. 32. 368-383 (1988)). After HF cleavage the crude peptide was washed with diethyl ether and then extracted from the resin with 80% aqueous acetic acid in water. The peptide solution was titrated with I2-glacial acetic acid (saturated) until the solution turned light brown in color and stirred for one hour at room temperature. The excess iodine was quenched by adding an ascorbic acid-water solution (saturated) . The peptide solution was then concentrated under reduced pressure and purified as described for Procedure A, Section 4.
This procedure can also be used for synthesis and purification of longer cyclic peptide compounds which contain a disulfide linkage.
Procedure C) Synthesis of Cyclic Thioether Compounds
Figure imgf000050_0001
l-FCA, bromoacetic acid and DCC were purchased from Aldrich Chemical Company (Milwaukee, WI) . All natural and synthetic amino acids and derivatives thereof were purchased from BACHEM INC. (Torrance, California) .
Trifluoroacetic acid was from Halocarbon Co. (New York,
New York) . Triethylamine was from Fisher Scientific
(Fall Lawn, New Jersey) . Other reagents were obtained from conventional sources and of analytical grade.
The peptide was synthesized by the solid phase method with a Beckman automated peptide synthesizer
(System 990, Beckman Instruments, Inc., Palo Alto,
California) . The following amino acids were used in the synthesis: Boc-Lys(Fmoc) , Boc-/8-Asp(α-0-Bzl) and Boc- (ThioP) . Boc-Cys(4-Me-Bzl) -0CH2-polystyrene resin was used for the stepwise assembly of the title peptide, using the Boc amino acid procedure in Table 1. Following capping of the N-terminus with l-FCA, the Lys N-e-Fmoc group was removed by treatment with 20% piperidine in DMF. The solution was then stirred for 20 minutes at room temperature and filtered. The resin was washed with DMF. The free Lys side-chain amino group was coupled with bromoacetic acid and after HF cleavage, the peptide was cyclized by forming a mono-sulfide linkage by the general procedure, as described below. General cyclization procedure for formation of monosulfide linkage
The Lys side-chain deprotected peptide was coupled with bromoacetic acid through the use of DCC in DCM. The mixture was stirred for 2 hours at room temperature
(completion of the coupling reaction was monitored by the ninhydrin test) . The resin was washed with DCM (3 x 1 min) , MeOH (2 x 1 min) and DCM (3 x 1 min) .
The bromoacetyl peptide was removed from the resin by treatment with HF in the presence of anisole (1 ml/g resin) and DMS (0.5 ml/g resin) for 1 hr. at 0°C. The HF was removed under reduced pressure. The cleaved mixture was washed three times with diethyl ether and the peptide was extracted into aqueous acetic acid. This bromoacetyl peptide is unstable, and the cyclization to form the monosulfide bridge immediately followed the HF cleavage.
Dilute NH4OH solution was added to the crude peptide extract. The pH was adjusted to 8-9, and the solution was stirred for one hour at room temperature, (completion of the cyclization was monitored by HPLC and the Ellman test) . The crude cyclized peptide was purified as described for Procedure A, Section 4.
Procedure D) Synthesis of Cyclic Dithioether In this example, the following compound was prepared:
Figure imgf000051_0001
1-Fluorenecarboxylic acid, dibromoethane, and DCC were purchased from Aldrich Chemical Company (Milwaukee, WI) . All amino acids, amino acid derivatives and analogs were purchased from BACHEM INC. (Torrance, California) . Trifluoroacetic acid was from Halocarbon Co. (New York, New York) . Triethylamine was from Fisher Scientific (Fall Lawn, New Jersey) . Other reagents were obtained from conventional sources and were of analytical grade.
The peptide was synthesized by the solid phase method with a Beckman automated peptide synthesizer (System 990, Beckman Instruments, Inc., Palo Alto, California) . N-Boc-S-9-Fluorenylmethyl-L-Cysteine was attached to the hydroxymethyl resin using DCC and DMAP as a catalyst. The following amino acids were used in the synthesis: Boc-Arg(Tos) , Boc-/S-Asp(α-0-Bzl) and Boc- (ThioP) . Boc-Cys(Fm) -0CH2-polystyrene resin was used for the stepwise assembly of the peptide following the Boc amino acid procedure in Table 1. Following reaction of the peptide with 1-Fluorenecarboxylic acid at the α-N-terminal Arg, the two Fm-groups were removed from the Cys-side chains by 20% piperidine in DMF, as discussed above. The peptide was cyclized to form the dithioether linkage on the resin by the general procedure below.
General cyclization procedure for formation of dithioether linkage
The dithioether linkage (-S- (CH2)n-S-) was synthesized while the peptide was bound on the resin.
After removing the Fm-groups from the Cys-side chains, the dithioether linkage was formed by adding dibromoethane (3 equivalents) and DIEA in DMF. The pH was adjusted to 8-9, and the solution was stirred for 2 to 4 hours at room temperature, (completion of the cyclization was monitored by HPLC and the Ellman test) . The peptide was then washed with DMF (2 x 1 min) , DCM (3 x 1 min) , MeOH (2 x 1 min) and DCM (3 x 1 min) .
The cyclic peptide was removed from the resin by treatment with HF in the presence of anisole for 1 hr. at 0°C. After removal of the HF, in vacuo, the residue was washed with diethyl ether and the peptide was extracted into an aqueous acetic acid solution. The aqueous extract was lyophilized to yield the crude peptide. The crude peptide was purified as described for Procedure A, Section 4. TABLE 2
Analytical data compounds:
Cyclization
# Name Procedure Purity MS
1) Arg-Cys*- (/8-Asp) - (ThioP) -Cys* B 74.5
2 ) (9-FAc) -Arg-Cys*- (/S-Asp) - (ThioP) -Cys* B 97.2 815
3 ) (Ada) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys* B 93.6 785
4 ) (l-FCA) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys* B 98.0 801
10 5) Trp-Arg-Cys*- (/8-Asp) - (ThioP) -Cys* B 90.7
6) (5-Finc) -Arg-Cys* - (/8-Asp) - (ThioP) -Cys* B 97.1 770
7 ) ( 9-FAc) -Arg-Cys*- (/3-Asp) -Asn-Cys* B 100
8 ) (Ac) -Arg-Cys*- (/S-Asp) - (ThioP) -Cys*-NH, B 99.2 650
9) (Ac) -Arg-Cys*- (/S-Asp) - (ThioP) -Cys* B 99.9 651
15 10) (Biotinyl) -Arg-Cys*- (/3-Asp) - (ThioP) -Cys* B 99.4
11 ) (l-FCA) -Arg-Cys* - (/8-Asp) - (ThioP) -Cys*-NH- B 100
12) ( l-FCA) -Gly-Cys* - (/8-Asp) - (ThioP) -Cys* B 99.5 oi
13 ) (l-FCA) -Lys-Cys*- (/3-Asp) - (ThioP) -Cys* B 100 773
14) (Nα-Me-Arg) -Cys*- (/8-Asp) - (ThioP) -Cys* B 100
20 15) (l-FCA) -Arg-Cys*- (/3-Asp) - (N-Me-Ala) -Cys* B 94.1
(S) — (CH2) 2 (S)
16) (l-FCA) Arg-Cys* - (/8-Asp) - (ThioP) -Cys* D 96.7 17) (l-FCA) (D-Arg) -Cys*- (/S-Asp) - (ThioP) -Cys* B 99.7
25 (S) (CH 2, )' 3 (S) I I
18) (l-FCA) -Arg-Cys* - (/S-Asp) - (ThioP) -Cys* D 98.7 19) ( 9-FCA) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys* B 100 20 ) (l-FCA) -Cys*- (/8-Asp) - (ThioP) -Cys* B 99.4
30 21) (Fmoc) -Lys (Ada) -Cys*- (/S-Asp) - (ThioP) -Cys* B 96.4 22 ) (Fmoc) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-NH2 B 89.5 830 23 ) (For) -Arg-Cys*- (/S-Asp) - (ThioP) -Cys* B 88.2 24 ) (For) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-NH2 B 61.4
Cyclization
# Name Procedure Purity MS
25) l-FCA) -Arg-Cys*- (/S-Asp) -Ser- (ThioP) -Cys* B 99.9 26) l-FCA) - (Nle) -Cys*- (/8-Asp) - (ThioP) -Cys* B 100 27) l-FCA) -Arg-Cys*- (/3-Asp) - (ThioP) -Cys*-Ala-Ala B 98.6 28) l-FCA) -Arg-Cys*- (/8-Asp) -Ser- (ThioP) -Cys*-Ala-Ala B 100 29) Lys(1-NaphAc) -Cys*- (/3-Asp) - (ThioP) -Cys* B 99.1 30) l-FCA) - (Cha) -Cys*- (/8-Asp) - (ThioP) -Cys* B 98.3 31) Fmoc) -Lys (PhAc) -Cys*- (/8-Asp) - (ThioP) -Cys* B 82.8 32) l-FCA) -Lys (For) -Cys*- (/8-Asp) - (ThioP) -Cys* B 96.2 33) Fmoc) -Lys (1-NaphAc) -Cys*- (/5*-Asp) - (ThioP) -Cys* B 99.7 34) Fmoc) -Lys (2-NaphAc) -Cys*- (/3-Asp) - (ThioP) -Cys* B 99.6 35) l-FCA) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala-Asp- (OFm) B 70.8 36) Ac) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala B 98.5 37) Ac) -Arg-Cys*- (/3-Asp) - (ThioP) -Cys*-Ala-Asp- (OFm) B 99.4 38) Ac) -Arg-Cys*- (3-Asp) - (ThioP) -Cys*-Ala-Asp- (NH-Ada) B 98.4 39) l-FCA) -Arg-Cys*- (/3-Asp) -Gly- (ThioP) -Cys* B 99.2 40) Fmoc) -Lys-Cys*- (/8-Asp) - (ThioP) -Cys* B 99.1 803 41) Ac) -Cys*- (/8-Asp) - (ThioP) -Cys*-Lys (Fmoc) -Gly B 69.0 902 42) l-FCA) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala-Ala B 90.8 773 43) Fmoc) -Orn-Cys*- (/3-Asp) - (ThioP) -Cys* B 96.2 44) Fmoc) -Orn(PhAc) -Cys*- (jβ-Asp) - (ThioP) -Cys* B 72.0 45) l-FCA) -Arg-Cys*- (JS-Asp) - (ThioP) -Cys*-Ala-Ser B 97.0 959 46) 9-FAc) -Arg-Cys*- (/3-Asp) - (ThioP) -Cys*-Ala-Ala B 88.5 47) 2-NaphAc) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala B 99.5 48) PhAc) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala B 98.4 49) l-NaphS02) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala B 99.4 50) 2-NaphS02) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala B 83.3 51) l-FCA) -Arg-Cys*- (/S-Asp) - (ThioP) -Cys*-Ala B 100 52) l-FCA) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Gly-Gly B 76.8 53) 2-NaphCA) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala B 96.7 54) 9-FAc) -Arg-Cys*- (iS-Asp) - (ThioP) -Cys*-Ala-Lys B 100 55) 2-NaphAc) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Lys B 88.6 56) 2-NaphAc) -Arg-Cys*- (/3-Asp) - (ThioP) -Cys*-Ala-Lys (Fmoc) -] H B 86.9
Cyclization
# Name Procedure Purit MS
57) (2-NaphAc) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*- (Abu) -Lys B 99.1
58) (9-FCA) -Lys (PhAc) -Cys*- (/S-Asp) - (ThioP) -Cys* B 89.6
59) (l-FCA) -Lys (PhAc) -Cys*- (0-Asp) - (ThioP) -Cys*-Ala-Ser B 96.5
60) (l-FCA) -Lys (PhAc) -Cys*- (0-Asp) - (ThioP) -Cys* B
61) (9-FCA) -Lys-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala B 99.8
62) (l-FCA) -Arg-Cys*- (/8-Asp) - (TCA) -Cys* B 100
63) (2-NaphAc) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys* B 100
10 64) (9-FAc) -Lys-Cys*- (/S-Asp) - (ThioP) -Cys* B 92.4
65) (9-FAc) -Arg-Cys*- (/S-Asp) - (ThioP) -Cys*- (Abu) -Lys B 98.4
66) (9-FCA) -Lys (PhAc) -Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala B 99.3
67) (l-FCA) -Lys*- (/8-Asp) - (ThioP) -Asp* A 95.5
15
(HN) •C-CH. (S)
68 (l-FCA) -Lys*- (/3-Asp) - (ThioP) -Cys* C 100 69 (9-FAc) -Lys (PhAc) -Cys*- (ø-Asp) - (ThioP) -Cys*-Ala-Ser B 88.2
20 70 (Xan) -Arg-Cys*- (jS-Asp) - (ThioP) -Cys* B 94.8 71 (PhAc) -Arg-Cys* /8-Asp) - (ThioP) -Cys* B 100 72 (Fmoc) -Arg-Cys*- /8-Asp) -Pro-Cys* B 99.0 813 73 (Fmoc) -Arg-Cys*- /S-Asp) - (Aib) -Cys* B 99.9 801 74 (Fmoc) -Arg-Cys*- /3-Asp) -Ala-Cys* B 91.9 787
25 75 (Fmoc) -Arg-Cys*- /8-Asp) - (N-Me-Ala) -Cys* B 99.0 801 76 (Fmoc) -Arg-Cys*- /8-Asp) - (Tic) -Cys* B 99.9 875 77 (Fmoc) -Arg-Cys*- /S-Asp) -Pro-Cys*-NH- B 99.9 812 78 (Fmoc) -Arg-Cys*- (/8-Asp) - (N-Me-Ala) -Cys*' -NH. B 98.0 800 79 (Fmoc) -Arg-Cys*- (D-/8-Asp) - (ThioP) -Cys* B 96.0 831
30 80 (Fmoc) -Arg-Cys*- (/8-Asp) - (ThioP) - (D-Cys*) B 99.0 831 81 (Fmoc) -Arg-Cys* (|S-Asp) - (D-Pro) -Cys* B 99.9 813 82 (Fmoc) -Arg- (Pen) *- (/8-Asp) - (ThioP) -Cys* B 98.0 859 83 (Fmoc) -Arg-Cys*- (/3-Asp) - (ThioP) - (Pen) * B 99.0 858 84 (Fmoc) -Arg- (D-Pen) *- (jS-Asp) - (ThioP) - (D-Pen) * B 99.0 887
Cyclization
# Name Procedure Purity MS
85) (Fmoc) -Arg-Cys*- (/3-Asp) -Cys* B 96.0 716 86) (Ac) -Cys*- ( (/S-Asp) (OFm) ) - (ThioP) -Cys B 99.0 673
* denotes residue utilized in the cyclization of the compound
Amino acids of the peptide backbone are delineated with hyphens; synthetic amino acids unnatural amino acids, and amino acid mimetics are enclosed in parentheses; the R1-R5 group which are attached to the backbone amino acid groups are enclosed in parentheses and ar
10 immediately adjacent to the amino acid to which it is attached without an intervenin hyphen.
In Table 2, the amino acid without an indication of enantiomeric structure means L enantiomer.
EXAMPLE 2 CELL ADHESION INHIBITION ASSAYS: Jurkat-Endothelial Cell Adhesion Assay
The following assay established the activity of the present compounds in inhibiting β -mediated cell adhesion in a representative in vitro system. This assay measured the adhesive interactions of a T-cell line, Jurkat, known to express high levels of α /81, to endothelial cell monolayers in the presence of representative test compounds of the present invention. The test compounds were added in increasing concentrations to T-cells and then the T-cell/compound mixture was added to IL-1 stimulated endothelial cell monolayers. The plates were incubated, washed and the percentage of attached cells was quantitated. The present assay directly demonstrated the cell adhesion inhibitory activity and adhesion modulatory activity of the present compounds.
Human umbilical vein endothelial cells (HUVEC) were purchased from Clonetics (San Diego, CA) at passage number 2. The cells were grown on 0.5% porcine skin gelatin pre-coated flasks (Sigma, St. Louis, MO) in EGM- UV media (Clonetics, San Diego, CA) supplemented with 10% fetal bovine serum. Cells were re-fed every 2-3 days, reaching confluence by day 4 to 6. The cells were monitored for factor VIII antigen and our results showed that at passage 12, the cells are positive for this antigen. The endothelial cells were not used following passage 7. The T-cell line Jurkat was obtained from American Type Culture Collection and cultured in RPMI media containing 10% fetal calf serum. The cells were washed twice in Hank's buffered saline solution (HBSS) and resuspended in Dulbecco's Minimal Eagle's Media (DMEM) containing 2.5 mg/ml Human Serum Albumin (HSA) . Jurkat cells (lxlO6 cells/ml) were stained with 10 ng/ml BCECF- AM (Molecular Probes, Eugene, OR) in HBSS without phenol red. The cells were loaded with the BCECF-AM for 60 minutes in the dark at 37°C, washed 2 times, and resuspended in DMEM-HSA solution.
Confluent endothelial monolayers, grown in 96-well tissue culture plates, were stimulated for 4 hours at 37°C with 0.1 ng/ml (50 U/ml) recombinant IL-1 (Amgen, Thousand Oaks, CA) . Following this incubation, the monolayers were washed twice with HBSS and 0.1 ml of DMEM-HSA solution was added. Jurkat cells (5 x 105 cells) were combined with the appropriate concentration of peptide and 0.1 ml of the Jurkat cell-peptide mixture was added to the endothelial cell monolayers. Generally, 250, 50, 10 and 2 μM peptide concentrations were tested. With several potent peptides the IC50 was determined by testing the peptides at 50, 10, 2 and 0.4 μM. The plates were placed on ice for 5 minutes to allow for Jurkat cell settling and the plates were incubated at 37°C for 20 minutes. Following this incubation, the monolayers were washed twice with PBS containing 1 mM calcium chloride and 1 mM magnesium chloride and the plates were read using a Millipore Cytofluor 2300 (Marlboro, MA) . Fluorescence in each well was measured as Arbitrary Fluorescence Units and percent adhesion in the absence of peptide was adjusted to 100% and the % adhesion in the presence of peptides was calculated. Monolayers were also fixed in 3% paraformaldehyde and evaluated microscopically to verify the adhesion.
The JY-Endothelial Cell Assay The following assay established the activity of the present compounds in inhibiting cell adhesion through β2 integrins in a representative in vi tro system. The present assay directly demonstrated the anti-/82 adhesion activity and adhesion modulatory activity of the present compounds. The human B cell line, JY, was cultured in RPMI media containing 10% fetal calf serum at 37°C, in a humidified C02 atmosphere. Endothelial cells were grown to confluency in 96-well micro-titer assay plates, as in the Jurkat-EC'assay. Before the assay, the endothelial cells were stimulated with 50 U/ml rTNF for 18-24 hours at 37°C. JY cells were loaded with the fluorescent dye indicator BCECF-AM as follows: JY cells were washed twice with HBSS and cells were resuspended in HBSS at 5X106 cells/ml; BCECF-AM (Molecular Probes), stock concentration^ mg/ml in DMSO, was added to the JY cells to a final concentration of 2 μg/ml; cells were incubated in the dark at 37°C for 30-45 minutes; washed twice with HBSS and used in the assay. The compounds presented in this invention were typically dissolved in 2.5 mg HSA/ml DME at four times the assay concentration and Ph adjusted with 7.5% Na bicarbonate, as needed.
TNF-stimulated HUVEC were washed twice with HBSS (at room temp) . 50 μl of cold HSA-DME was added to each well and the plate transferred to ice. While on ice, the following components were added to the wells in the indicated order:
1) 50 μl test compound 2) 50 μl BCECF-labelled JY cells
3) 50 μl PMA (50 ng/ml) The assay plates were then typically incubated for 30 min at 37°C and washed four times with PBS containing Mg2+ and Ca2+ (room temp) . lOOμl of PBS containing Mg2+ and Ca2+ were added to each well and the fluorescence from the adherent BCECF-labelled cells was analyzed using a fluorescence plate reader. Controls were included which were -TNF/+PMA, +TNF/-PMA, +TNF/+PMA
(without compound) and either anti-LFAα or anti-LFA/S supernatants. Results of Jurkat-Endothelial Cell Adhesion
The above-described adhesion assay yielded the following results for the inhibition of Jurkat cell adhesion to IL-1 stimulated endothelial cells.
Results of JY-Endothelial Cell Adhesion
The above-described adhesion assay yielded the following results for the inhibition of JY cell adhesion to TNF stimulated endothelial cells.
Thus an objective of the present invention is to provide compounds having extraordinarily high potencies in modulating cell adhesion to VCAM and ICAM through β and β2 integrins, respectively, including but not limited to inhibition of T-cell adhesion to endothelial cells. The exact receptors involved in this interaction and the specific receptors targeted by the test compounds include, but are not limited to, a^β^ i 0*4/87,
Figure imgf000060_0001
The following Table 3 shows results from three of the above assays using data from various compounds of the present invention.
TABLE 3 compounds: ICso 1 for adhesion inhibition2 # Name JY-EC Jurk- EC
2) 9-FAc) -Arg-Cys*- (jS-Asp)- (ThioP) -Cys* 141 3
4) l-FCA) -Arg-Cys*- (jS-Asp) - (ThioP) -Cys* 61 0.3
8) Ac) -Arg-Cys*- (/S-Asp) -(ThioP) -Cys*-NH2 169 84
11) l-FCA) -Arg-Cys*- (/J-Asp) - (ThioP) -Cys*-NH2 175
13) l-FCA) -Lys-Cys*- (/8-Asp) - (ThioP) -Cys* 68 <2
10 19) 9-FCA) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys* 54
22) Fmoc) -Arg-Cys*- (/S-Asp) - (ThioP) -Cys*-NH2 52
24) For) -Arg-Cys*- (/S-Asp) - (ThioP) -Cys*-NH2 393
26) l-FCA) - (Nle) -Cys*- (/S-Asp) - (ThioP) -Cys* 218
27) l-FCA) -Arg-Cys*- (jS-Asp) - (ThioP) -Cys*-Ala-Ala 51
15 31) Fmoc) -Lys (PhAc) -Cys*- (/S-Asp) - (ThioP) -Cys* 87 vo
33) Fmoc) -Lys (1-NaphAc) -Cys*- (/8-Asp) - (ThioP) -Cys* 88
34) Fmoc) -Lys (2-NaphAc) -Cys*- (/3-Asp) - (ThioP) -Cys* 148
35) l-FCA) -Arg-Cys*- (/3-Asp) - (ThioP) -Cys*-Ala-Ala-Asp- (OFm) 267
37) Ac) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Asp- (OFm) 106
20 40) Fmoc) -Lys-Cys*- (/8-Asp) - (ThioP) -Cys* 436
41) Ac) -Cys*- (/8-Asp) - (ThioP) -Cys*-Lys(Fmoc) -Gly 78
43) Fmoc) -Orn-Cys*- (/8-Asp) - (ThioP) -Cys* 165
44) Fmoc) -Orn(PhAc) -Cys*- (/?-Asp) - (ThioP) -Cys* 81
45) l-FCA) -Arg-Cys*- (/3-Asp) - (ThioP) -Cys*-Ala-Ser 63
25 46) 9-FAc) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala 56
47) 2-NaphAc) -Arg-Cys*- (3-Asp) - (ThioP) -Cys*-Ala-Ala 79
49) l-NaphS02) -Arg-Cys*- (/3-Asp) - (ThioP) -Cys*-Ala-Ala 239
50) 2-NaphS02) -Arg-Cys*- (jS-Asp) - (ThioP) -Cys*-Ala-Ala 194
51) l-FCA) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala 101
30 52) l-FCA) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Gly-Gly 64
53) 2-NaphCA) -Arg-Cys*- (/3-Asp) - (ThioP) -Cys*-Ala-Ala 387
54) 9-FAc) -Arg-Cys*- (|S-Asp) - (ThioP) -Cys*-Ala-Lys 197
55) 2-NaphAc) -Arg-Cys*- (/3-Asp) - (ThioP) -Cys*-Ala-Lys 251
56) 2-NaphAc) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Lys (Fmoc) -NH2 245
35 58) 9-FCA) -Lys(PhAc) -Cys*- (/8-Asp) - (ThioP) -Cys* 70
59) l-FCA) -Lys (PhAc) -Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ser 63
compounds: -^so1 ^or adhesion inhibition2
# Name JY-EC Jurk- EC
60) (l-FCA) -Lys(PhAc) -Cys*- (0-Asp) - (ThioP)-Cys* 71
5 61) (9-FCA)-Lys-Cys*- (/S-Asp)- (ThioP)-Cys*-Ala-Ala 117
64) (9-FAc) -Lys-Cys*- (/S-Asp) - (ThioP) -Cys* 133
65) (9-FAc) -Arg-Cys*- (/S-Asp)- (ThioP) -Cys*- (Abu) -Lys 353
Figure imgf000062_0001
1 IC 5o f°r adhesion inhibition
2 For detailed description of the tests used see patent body * denotes residue utilized in the cyclization of the compound
In Table 3, the amino acid without an indication of enantiomeric structure means L 25 enantiomer.
Figure imgf000062_0002

Claims

CLAIMS :
1. A compound of the formula (I) :
R1-(X°)r-(X1)m-L c —-X2-(X3)p z- —(X4)q-L I2-(X5)n-(X6)s (I)
or a pharmaceutically acceptable salt thereof, wherein
L1 is selected from the group consisting of a residue of an amino acid and an amino acid mimetic, having a functional group suitable for the formation of a cyclizing moiety or bond, Z, between L1 and L2;
L2 is selected from the group consisting of a residue of an amino acid and an amino acid mimetic, having a functional group suitable for the formation of a cyclizing moiety or bond, Z, between L1 and L2; Z is a cyclizing moiety or bond between L1 and L2;
X° is selected from the group consisting of a residue of an amino acid and an amino acid mimetic; r is an integer of 0 or 1;
X1 is selected from the group consisting of a residue of an amino acid and an amino acid mimetic; m is an integer of 0, 1 or 2;
X2 is selected from the group consisting of 3-Asp, and γ-Glu and ester and amide derivatives thereof, formed from the a-carboxyl group of any of the aforementioned groups;
X3 is selected from the group consisting of Ser(R4) , Thr(R4), Tyr(R4), Ala, Gly, Lys(R4), 0rn(R4) , Dpr(R4), N-Me-Ala, Aib, Val, Tic, o-halo-Tyr, m-halo-Tyr, dihalo- Tyr, p-halo-Phe, dihalo-Phe, Sar, Leu, lie, Nle and Cys(R4), wherein when X3 is Ser(R4), Thr(R4) or Tyr(R4), then R4 is a substituent of the side chain hydroxyl group of X3 and is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, a cycloalkyi-lower alkanoyl, an aryl, an arylalkyi, an aryloxycarbonyl, an arylcarbonyl, a heteroaryl-lower alkyl, an arylacetyl, a heterocyclic group, a lower alkanoyl or an arylalkoxycarbonyl, when X3 is Lys(R4) , Orn(R4) or Dpr(R4) , then R4 is a substituent of the side chain terminal amino group of X3 and is selected from the group consisting of a hydrogen atom, lower alkyl, a cycloalkyi, a lower alkanoyl, an arylalkyi, an arylalkoxycarbonyl, an aryl, an aryloxycarbonyl, an arylcarbonyl, an arylacetyl, a cycloalkyi-lower alkanoyl, when X3 is Cys(R4) , then R4 is a substituent of" the side chain sulfhydryl group of X3 and is selected from the group consisting of a hydrogen atom, lower alkyl, an arylalkyi, an aryl, a cycloalkyi, an aryloxycarbonyl, an arylcarbonyl, an acetamido-lower alkyl, an arylacetyl or a heterocyclic group, lower alkanoyl, an arylalkoxycarbonyl, a cycloalkyi-lower alkanoyl; p is an integer of 0 or 1;
X4 is selected from the group consisting of Pro, ThioP, Aib, TTC, Asn, TCA, Sar, an N-methylated natural amino acid, Tic and pipecolinic acid; q is an integer of 0 or 1; X5 is a residue of an amino acid or an amino acid mimetic; n is an integer of 0, 1, 2 or 3;
X6 is selected from the group consisting of a residue of an amino acid and an amino acid mimetic; s is an integer of 0 or 1; and
R1 is selected from the group consisting of a hydrogen atom, Xan, Fmoc, 9-FAc, 9-FCA, l-FCA, Ac, 2- NaphAc, Ada, 5-Fine, biotinyl, Su, 1-NaphCA, For, 1- NaphAc, PhAc, l-NaphS02, 2-NaphS02 and 2-NaphCA, with the proviso that the compound (Fmoc) -Arg-Cys*- ( β-Asp)- (ThioP) -Cys* is excluded. 2. A compound of Claim 1, wherein X° is Trp and X1 is side chain-protected basic amino acid residue having a side chain terminal amino group with the formula -NHR2, where R2 is selected from the group consisting of a hydrogen atom, PhAc, 1-NaphAc, 2-NaphAc, Ada,
2- norbornylacetyl, l-FCA, CHAc and For.
3. A compound of Claim 1, wherein the α-carboxyl group of X2 has the formula -C(0)R3, where R3 is selected from the group consisting of -OR, -NHR and -NRR; and R is selected from the group consisting of a hydrogen atom, a lower alkyl, an aryl, a cycloalkyi, a heteroaryl-lower alkyl, a heterocyclic group and an arylalkyi.
4. A compound of Claim 3, wherein R is selected from the group consisting of Fm, methyl, benzyl, cyclohexyl, isobutyl, 1- or 2-naphthylmethyl, 1- adamantyl and 2-, 3- or 4-picolyl.
5. A compound of Claim 1, wherein X3 is selected from the group consisting of Ser(R4), Thr(R4) and Tyr(R4); R4 is a substituent of the side chain hydroxyl group of X3 and is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, an aryl, a cycloalkyi-lower alkanoyl, an aryloxycarbonyl, an arylcarbonyl, a heteroaryl-lower alkyl, an arylacetyl, a heterocyclic group, a lower alkanoyl, an arylalkoxycarbonyl and an arylalkyi.
6. A compound of Claim 5, wherein R4 is selected from the group consisting of methyl, benzyl, cyclohexyl, 1- and 2-naphthylmethyl, Fm, 2-, 3- and 4-picolyl and isobutyl.
7. A compound of Claim 1, wherein X3 is selected from the group consisting of Lys(R4), Orn(R4) and Dpr(R4) , where R4 is a substituent of the side chain terminal amino group of X3 and is selected from the group consisting of a hydrogen atom, a lower alkyl, an aryl, a cycloalkyi, a lower alkanoyl, an arylalkyi, an arylalkoxycarbonyl, an aryloxycarbonyl, an arylcarbonyl, an arylacetyl and a cycloalkyi-lower alkanoyl.
8. A compound of Claim 7, wherein R4 is selected from the group consisting of cyclohexyl, 1- and 2- naphthylmethyl, Fmoc, l-FCA, 9-FCA, Ada, Ac and 9-FAc.
9. A compound of Claim 1, wherein X5 and/or X6 is a side chain-protected derivative of a basic amino acid residue having a side chain terminal amino group with the formula -NHR4, where R4 is selected from the group consisting of a hydrogen atom, a lower alkyl, an aryl, a cycloalkyi, a cycloalkyi-lower alkanoyl, an arylalkyi, an arylalkoxycarbonyl, a lower alkanoyl, a heterocyclic group, an aryloxycarbonyl, an arylcarbonyl and an arylacetyl.
10. A compound of Claim 9, wherein R4 is selected from the group consisting of Ada, cyclohexyl, 1- and 2- naphthylmethyl, Ac, Fmoc, 9-FAc, 9-FCA and l-FCA.
11. A compound of Claim 1, wherein X5 and/or X6 is a side chain-protected derivative of an acidic amino acid residue having a side chain terminal carboxyl group with the formula -C(0)R4, where R4 is selected from the group consisting of -OR, -NHR and -NRR; and R is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, a heteroaryl-lower alkyl, a heterocyclic group, an aryl and an arylalkyi.
12. A compound of Claim 11, wherein R is selected from the group consisting of Fm, methyl, isobutyl, benzyl, cyclohexyl, 1- and 2-naphthylmethyl, 2-, 3- and 4-picolyl and 1-adamantyl.
13. A compound of Claim 1, wherein X5 and/or X6 is selected from the group consisting of Ser(R4) , Thr(R4), Tyr(R4) and side-chain hydroxyl containing synthetic amino acids; R4 is a substituent of the side hydroxyl groups of X5 and/or X6 and R4 is selected from the group consisting of a hydrogen atom, a lower alkyl, a cycloalkyi, a heteroaryl-lower alkyl, an aryloxycarbonyl, an arylcarbonyl, an arylacetyl, a heterocyclic group, an aryl, an arylalkyi, a cycloalkyi- lower alkanoyl, a lower alkanoyl and an arylalkoxycarbonyl.
14. A compound of Claim 13, wherein R4 is selected from the group consisting of Fm, methyl, isobutyl, benzyl, cyclohexyl, 1- or 2-naphthylmethyl, 2-, 3- and 4-picolyl.
15. A compound of Claim 1, wherein X3 and/or X5 and/or X6 is selected from the group consisting of Cys(R4) and sulfhydryl side-chain containing synthetic amino acids; R4 is a substituent of the side chain sulfhydryl group of X5 and/or X6 and R4 is selected from the group consisting of a hydrogen atom, a lower alkyl, an aryl, a cycloalkyi, an acetamido-lower alkyl, an aryloxycarbonyl, an arylcarbonyl, an arylacetyl, a cycloalkyi-lower alkanoyl, a heterocyclic group, an arylalkyi, a lower alkanoyl and an arylalkoxycarbonyl.
16. A compound of Claim 15, wherein R4 is selected from the group consisting of methyl, benzyl, Fm, cyclohexyl, 1- or 2-naphthylmethyl, Acm, 4-methylbenzyl and Ada. 66
17. A compound of Claim 1, wherein the C-terminal α-carboxyl group has the formula -C(0)R5, where R5 is selected from the group consisting of -OR, -NHR and -NRR and R is selected from the group consisting of a hydrogen atom, a lower alkyl, an aryl, a cycloalkyi, a heteroaryl-lower alkyl, a heterocyclic group and an arylalkyi.
18. A compound of Claim 17, wherein R is selected from the group consisting of Fm, benzyl, cyclohexyl, 1- and 2-naphthylmethyl, methyl, isobutyl, 2-, 3- and 4- picolyl and 1-adamantyl.
19. A compound of Claim 1, wherein L1 and L2 are each or together selected from the group consisting of Cys, Cys-NH2 (only for L2 and when no X5 or X6 groups are present) , Arg (only for L1 and when X° or X1 are absent) ,
Pen, Orn, Lys, Dpr, Gly (only for L1 and when X° or X1 are absent) , Met, Glu and Asp;
Z is selected from a single bond, a lower alkylene or a group of the formula: -C0CH2-; X° is selected from the group consisting of Trp, 1-
Nal, 2-Nal, Tyr, Leu, Nle, lie, Val, NorVal and Cha;
X1 is selected from the group consisting of Lys (R2) ,
Gly, Nα-Me-Arg, Nle, Cha, Val, NorVal, Dpr(R2), Arg,
Orn(R2), Leu, lie and Abu; R2 is selected from a hydrogen atom, Ada, 2- norbornylacetyl, l-FCA, 1-NaphAc, 2-NaphAc, PhAc, For or
CHAc;
X2 is selected from the group consisting of β-Asp and jβ-Asp(R3), γ-Glu and γ-Glu(R3) and R3 is -OR, -NHR or -NRR and where R is a hydrogen atom, a lower alkyl, an aryl, an arylalkyi, cycloalkyi, a heteroaryl-lower alkyl or heterocyclic group; and
X5 and/or X6 is selected from the group consisting of Ala; Asp(R4) and Glu(R4) wherein R4 is a substituent of the derivatized side chain terminal carboxyl group and is selected from the group consisting of -OR, -NRR and -NHR where R is selected from the group consisting of a hydrogen atom, a lower alkyl, an aryl, a cycloalkyi, a heteroaryl-lower alkyl, a heterocyclic group and an arylalkyi; Ser(R4), Tyr(R4) and Thr(R4) wherein R4 is a substituent of the derivatized side chain hydroxyl group and is selected from the group consisting of H, a lower alkyl, a cycloalkyi, an aryl and an arylalkyi; Gly; Abu; Lys(R4); Dpr(R4) and Orn(R4) wherein R4 is a substituent of the derivatized side chain terminal amino group and is selected from the group consisting of H, a lower alkyl, a cycloalkyi, a lower alkanoyl, an aryl alkyl, an arylalkoxycarbonyl, an aryl, an aryloxycarbonyl, an arylcarbonyl and an arylacetyl; AnC; Leu; Val; lie; Nle; /8-Ala and Cys(R4) wherein R4 is a substituent of the derivatized side chain sulfhydryl group and is selected from the group consisting of a lower alkyl, a cycloalkyi, an acetamido- lower alkyl, an aryl and an arylalkyi.
20. A compound of Claim 19, wherein R1 is selected from the group consisting of hydrogen, Xan, 9-FAc, 9- FCA, l-FCA, Ac, 2-NaphAc, Ada, 5-Finc, biotinyl, Su, 1- NaphCA, For, 1-NaphAc, PhAc, l-NaphS02, 2-NaphS02 and 2- NaphCA.
21. A compound of Claim 19 or 20, wherein p is an integer of 1.
22. A compound of Claim 1, wherein Z is selected from a single bond, a lower alkylene or a group of the formula: -COCH2-; R1 is selected from hydrogen, l-FCA, 9-FAc, Ada, 5- Finc, Ac, Biotinyl, 9-FCA, Fmoc, For, 9-FAc, 2-NaphAc, PhAc, l-NaphS02, 2-NaphS02, 2-NaphCA or Xan;
X° is Trp; r is an integer of 0 or 1; X1 is selected from Arg, Nα-Me-Arg, Lys, Lys (Ada) , Lys (1-NaphAc) , Lys (PhAc) , Lys (For) , Lys (2-NaphAc) , Orn, Orn(PhAc), Gly, Nle or Cha; m is an integer of 0 or 1; L1 is selected from Cys, Lys or Pen;
X2 is selected from /S-Asp or /3-Asp (αOFm) ;
X3 is selected from Ser, N-Me-Ala, Gly or Ala;
X4 is selected from ThioP, Asn, TCA, Pro, Aib or Tic; L2 is selected from Cys, Cys-NH2, Asp or Pen;
X5 is selected from Ala, Gly, Abu or Lys (Fmoc) ; and
X6 is selected from Asp- (OFm) , Asp- (NH-Ada) , Ser, Lys, Lys (Fmoc) -NH2 or Gly.
23. A compound of Claim 22, wherein R1 is selected from hydrogen, l-FCA, 9-FAc, Ada, 5-Finc, Ac, Biotinyl,
9-FCA, For, 9-FAc, 2-NaphAc, PhAc, l-NaphS02, 2-NaphS02, 2-NaphCA or Xan.
24. A compound of Claim 23, wherein: Z is a single bond; R1 is selected from l-FCA, 9-FAc, Ac or Xan; r is an integer of 0;
X1 is selected from Arg or Lys; m is an integer of 1;
L1 is Cys;
Figure imgf000070_0001
p is an integer of 0;
X4 is ThioP; q is an integer of 1;
L2 is selected from Cys or Cys-NH2; n is an integer of 0; and s is an integer of 0.
25. A compound of the formula: (S) (S)
R -Arg-Cy Is- (jS-Asp) - (ThioP) -Cy Is
wherein R1 is a substituent of the α-amino group of Arg and is selected from the group consisting of 9-FCA, 1- FCA, 9-FAc, Xan, For, Ac, H, Ada, 5-Finc, PhAc, Su and biotinyl.
26. A compound of the formula: (S) (S)
R1-Lys-Cy 1s- (/S-Asp) - (ThioP) -Cy>s
wherein R1 is a substituent of the α-amino group of Lys and is selected from the group consisting of 9-FCA, Fmoc, l-FCA and 9-FAc.
27. A compound of the formula:
Figure imgf000071_0001
wherein R1 is a substituent of the α-amino group of Lys and is selected from the group consisting of Fmoc, 9- FCA, and l-FCA; and the e-amino terminal group of Lys is denoted as NHR2 where R2 is selected from the group consisting of 1-NaphAc, 2-NaphAc, H, For and PhAc.
28. A compound of the formula: (S) (S)
R-^Arg-Cy Is- (/S-Asp) - (ThioP) -Cy Is-Ala-Ala wherein R1 is a substituent of the α-amino group of Arg and is selected from the group consisting of 2-NaphAc, 9-FCA, l-FCA, 2-NaphCA, Ac, PhAc, l-NaphS02 and 2- NaphS02.
29. A compound of the formula:
(S) (S)
R -Lys-C Iys- (jS-Asp) - (ThioP) -CIys-Ala-Ser
wherein R1 is a substituent of the α-amino group of Lys and is selected from the group consisting of 9-FCA and l-FCA; and the e-amino terminal group of Lys is denoted as NHR2, where R2 is H, 1-NaphAc, 2-NaphAc or PhAc.
30. A compound of the formula: (S) (S)
(l-FCA) -Arg-Cy Is- (/8-Asp) - (ThioP) -CyIs.
31. A compound of the formula
(S) (s) I I
(l-FCA) -Arg-Cys- (/8-Asp) - (TCA) -Cys.
32. A compound of the formula
(S) (S) R1-Lys-C 1ys- (/8-Asp) - (TCA) -C Iys wherein R1 is a substituent of the α-amino group of Lys and is selected from the group consisting of Fmoc, 9- FAc, 9-FCA and l-FCA; and the e-amino terminal group of Lys is denoted as NHR2, where R2 is selected from the group consisting of H, 1-NaphAc, 2-NaphAc and PhAc.
33. A compound of the formula:
(S) (S)
Rx-Arg-C Iys- (/8-Asp) -Pro-CIys wherein R1 is a substituent of the α-amino group of Arg and is selected from the group consisting of Fmoc, 9- FCA, l-FCA and 9-FAc.
34. A compound of the formula: (S) (S)
R -Arg-C Iys- (/S-Asp) -C Iys wherein R1 is a substituent of the α-amino group of Arg and is selected from the group consisting of Fmoc, 9- FCA, l-FCA and 9-FAc.
35. A compound of the formula:
(S) (S)
R1-Arg-C Iys- (/8-Asp) - (ThioP) -CIys-Gly-Gly wherein R1 is a substituent of the α-amino group of Arg and is selected from the group consisting of l-FCA, 9- FCA, 9-FAc, and Fmoc.
36. A compound of the formula:
(S) (S)
R -Arg-C Iys- (/8-Asp) - (ThioP) -CIys-Abu wherein R1 is a substituent of the α-amino group of Arg and is selected from the group consisting of l-FCA, 9- FCA, 9-FAc, and Fmoc.
37. A compound of the formula:
(S) (S) R1-Orn-C Iys- (/8-Asp) - (ThioP) -C •ys
wherein R1 is a substituent of the α-amino group of Orn and is selected from the group consisting of l-FCA and Fmoc; and the side chain terminal amino group of Orn is denoted as NHR2, where R2 is selected from the group consisting of H and PhAc.
38. A compound selected from the group consisting of
(9-FCA) -Arg-Cys*- (/S-Asp) - (N-Me-Ala) -Cys*, (l-FCA) -Arg-Cys*- (/S-Asp) -Ser- (ThioP) -Cys*., (l-FCA) -Arg-Cys*- (/S-Asp) -Ser- (ThioP) -Cys*-Ala-Ala, (l-NaphS02) -Arg-Cys*- (/8-Asp) - (ThioP) -Cys*-Ala-Ala, (2-NaphS02) -Arg-Cys*- (jS-Asp) - (ThioP) -Cys*-Ala-Ala, (l-FCA) -Arg-Cys*- (/S-Asp) - (TCA) -Cys*, (Fmoc) -Arg-Cys*- (/S-Asp) - (Aib) -Cys*, (Fmoc) -Arg-Cys*- (/S-Asp) - (N-Me-Ala) -Cys*,
(Fmoc) -Arg-Cys*- (/S-Asp) - (N-Me-Ala) -Cys*-NH2 and (Ac) -Cys*- (/S-Asp) (αOFm) - (ThioP) -Cys* .
39. A pharmaceutical composition comprising: the compound of Claim 1, 2, 3, 5, 11, 13, 15, 17, 19, 20, 21, 22, 23, 24 or 38; and a pharmaceutically acceptable carrier.
40. A method of preventing or treating disease resulting from inappropriate cell adhesion to endothelium which comprises administering to a patient an effective amount of the compound of Claim 1, 2, 3, 5, 11, 13, 15, 17, 19, 20, 21, 22, 23, 24 or 38.
41. A method of preventing or treating disease resulting from abnormal cell adhesion to endothelium which comprises administering to a patient an effective amount of the compound of Claim 1 so as to restore normal cellular adhesion.
42. A method for treating or preventing inflammatory conditions in a human which comprises administering to a patient an effective anti- inflammatory amount of the compound of Claim 1.
43. A method for inhibiting adhesion of leukocytes to endothelial cells which comprises administering to a patient an effective amount of the composition of Claim
37 so as to inhibit adhesion of said leukocytes to
> endothelial cells.
44. An antibody which specifically binds to the compound of Claim 1.
45. A method of diagnosing a disease resulting from the presence of antibodies which bind to endothelial cells which comprises: i) immobilizing at least one compound as recited in Claim 1 on a substrate to form a derivatized substrate; ii) obtaining a blood or serum sample from a patient; iii) contacting said derivatized substrate from (i) with said blood or serum sample from (ii) under conditions such that antibodies which are present that specifically bind to said endothelial cells would bind to said derivatized substrate; and iv) detecting antibodies which bind to said derivatized substrate.
46. A method for diagnosing disease resulting from excessive adhesion of cells to endothelial cells which comprises: i) obtaining from a patient a blood sample; ii) contacting cells from said blood sample with a compound as recited in Claim 1; and iii) quantitating the amount of said compound which is specifically bound by said cells in said blood sample.
47. A method for diagnosing disease resulting from inadequate adhesion of leukocytes which comprises: i) obtaining from a patient a blood or lymph sample containing leukocytes; ii) contacting cells from said blood or said lymph with a compound as recited in Claim 1; and iii) quantitating the amount of said compound which is specifically bound by leukocytes in said blood or lymph.
48. A method according to Claim 42, wherein said inflammatory condition is selected from the group consisting of rheumatoid arthritis, asthma, allergies, adult respiratory distress syndrome, AIDS, cardiovascular disease, thrombosis or harmful platelet aggregation, reocclusion following thrombolysis, allograft rejection, reperfusion injury, psoriasis, eczema, contact dermatitis and other skin inflammatory diseases, osteoporosis, osteoarthritis, atherosclerosis, neoplastic disease including metastasis of neoplastic or cancerous growth, wound healing enhancement, treatment of certain eye diseases such as detaching retina, Type I diabetes, multiple sclerosis, systemic lupus erythematosus (SLE) , inflammatory and immunoinflammatory conditions including ophthalmic inflammatory conditions and inflammatory bowel disease, ulcerative colitis, regional enteritis and other autoimmune diseases.
49. A matrix for the purification of macromolecules having affinity for a compound of Claim 1, which comprises a compound of Claim 1 covalently bound to an insoluble support.
50. A method for purifying macromolecules which specifically bind to a compound of Claim 1, which comprises: i) providing an insoluble matrix derivatized with a compound of Claim 1; ii) contacting a sample containing a macromolecule having a high affinity for said compound of Claim 1, under conditions favoring formation of a complex between said macromolecule and said compound of Claim 1, said complex being thereby bound to said matrix; iii) washing said matrix having said complex bound to it with a solution which will not disrupt said complex, so as to remove contaminants; iv) eluting the desired substance by washing said matrix with a solution which disrupts the complex between said macromolecule and the compound of Claim 1; and v) recovering the macromolecules having high affinity for the compound of Claim 1.
51. Use of the compound of Claim 1 for preventing or treating a disease resulting from abnormal cell adhesion.
52. Use of the compound of Claim 1, for treating or preventing an inflammatory condition in a human.
53. Use of the compound of Claim 1, in the preparation of a pharmaceutical composition.
PCT/US1996/010186 1995-06-07 1996-06-06 CYCLIC PEPTIDE INHIBITORS OF β1 AND β2 INTEGRIN-MEDIATED ADHESION WO1996040781A1 (en)

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