US20020068695A1 - Peptido-mimetic compounds containing RGD sequence useful as integrin inhibitors - Google Patents
Peptido-mimetic compounds containing RGD sequence useful as integrin inhibitors Download PDFInfo
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- 0 C*C1*(C2CC2)C(CC(*)**)CC1 Chemical compound C*C1*(C2CC2)C(CC(*)**)CC1 0.000 description 18
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K7/00—Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
- C07K7/64—Cyclic peptides containing only normal peptide links
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07C—ACYCLIC OR CARBOCYCLIC COMPOUNDS
- C07C227/00—Preparation of compounds containing amino and carboxyl groups bound to the same carbon skeleton
- C07C227/30—Preparation of optical isomers
- C07C227/32—Preparation of optical isomers by stereospecific synthesis
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07C—ACYCLIC OR CARBOCYCLIC COMPOUNDS
- C07C67/00—Preparation of carboxylic acid esters
- C07C67/30—Preparation of carboxylic acid esters by modifying the acid moiety of the ester, such modification not being an introduction of an ester group
- C07C67/31—Preparation of carboxylic acid esters by modifying the acid moiety of the ester, such modification not being an introduction of an ester group by introduction of functional groups containing oxygen only in singly bound form
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K5/00—Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof
- C07K5/04—Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing only normal peptide links
- C07K5/06—Dipeptides
- C07K5/06139—Dipeptides with the first amino acid being heterocyclic
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
Definitions
- the present invention relates to cyclic peptido-mimetic compounds, in particular to cyclic peptido-mimetic compounds having azabicycloalkane structure and containing the RGD (Arg-Gly-Asp) sequence. Said compounds have inhibiting action on ⁇ v ⁇ 3 -receptor of the integrin family.
- the compounds of the present invention are endowed with antiangiogenic properties, hence are useful as medicaments, preferably for the treatment of tumors.
- Angiogenesis is intended as the formation of new capillary blood vessels. This natural phenomenon is involved both in physiological processes, as reproduction, and in pathological occurrences, as wound healing, arthritis and tumor vascularization.
- a number of growth factors have been identified as capable of promoting angiogenesis, through direct induction of proliferation and/or chemiotaxis of endothelial cells. Other factors, instead, act indirectly, by stimulating other cell types (mast cells, macrophages), which, on their turn, produce angiogenic factors.
- growth factors such as bFGF and VEGF, near a resting capillary net, suggested that angiogenesis might be the outcome of an unbalance between pro-and anti-angiogenic factors.
- tumor neovascularization is the target
- the antiangiogenic agent is targeted toward endothelial cells, easily reached without the well-known problems of chemotherapy, which is directed on the tumor cell;
- chemoresistance this is the most striking advantage, in fact, endothelial cells are genetically stable and it is quite difficult to observe drug resistance;
- angiogenic blockade avoids metastatic cells to diffuse through blood circulation
- apoptosis blocking angiogenesis makes tumor cell suffer from oxygen and nutrition lack, thus inducing apoptosis;
- antiangiogenic therapy does not give rise to side effects typical of chemotherapy.
- the endogenous pro-angiogenic factors to date known are acid/basic Fibroblast Growth factor (a/bFGF) and Vascular Endothelial Growth Factor (VEGF), and its subtype B and C, Angiogenin, Endothelial Growth Factor (EGF), Platelet derived-Endothelial Cell Growth Factor (PD-ECGF), Transforming Growth Factor- ⁇ (TGF- ⁇ ), Transforming Growth Factor- ⁇ (TGF- ⁇ ), Tumor Necrosis Factor- ⁇ (TNF- ⁇ ).
- a/bFGF acid/basic Fibroblast Growth factor
- VEGF Vascular Endothelial Growth Factor
- EGF Endothelial Growth Factor
- PD-ECGF Platelet derived-Endothelial Cell Growth Factor
- TGF- ⁇ Transforming Growth Factor- ⁇
- TGF- ⁇ Tumor Necrosis Factor- ⁇
- PK-C inhibitors such as Calphostin-C, phorbol esters and Staurosporin, can block angiogenesis, either partially or totally.
- Integrins are a class of receptors involved in the mechanism of cell adhesion and alterations in the function of these receptors are responsible in the occurrence of a number of pathologic manifestations, for example embryogenic development, blood coagulation, osteoporosis, acute renal failure, retinopathy, cancer, in particular metastasis.
- ⁇ v ⁇ 3 integrins play an important role in adhesion, motility, growth and differentiation of endothelial cells.
- ⁇ v ⁇ 3 integrins bind the RGD sequence (Arg-Gly-Asp), which constitutes the recognition domain of different proteins, such as laminin, fibronectin and vitronectin.
- the RGD sequence represent the minimal amino acid domain, in several extra-cellular matrix proteins, which has been demonstrated to be the binding site of the transmembrane integrins proteins family (G. Bazzoni, E. Dejana and M. G. Lampugnani. 1999, Current Opinion in Cell Biology; (11) pp. 573-581). Indeed replacement of just one single amino acid of this short sequence result in loss of binding activity to integrins (F. E. Ali, R. Calvo, T. Romoff, I. Samanen, A. Nichols. 1990, Peptides: Chemistry. Structure and Biology (Eds: J. E. Rivier, G. R. Marshall) ESCOM Science Leiden (Netherland) pp. 94-96).
- RGD sequence is the basis for developing antagonists of the different integrins.
- the reasons for which in many cases a high selectivity for certain integrins is observed is not quite clear, although a different conformation of the RGD sequence can be taken as an explanation.
- ⁇ v ⁇ 3 -receptor a member of the integrin family, is implicated in angiogenesis and in human tumor metastasis.
- a solution proposed in the art was to introduce in the peptido-mimetic structure a rigid building block (turn mimetics).
- WO91/15515 discloses cyclic peptides, also containing the RGD sequence, useful for treating thrombosis, through the selective inhibition of the platelet aggregation receptor GPIIb/IIa.
- WO92/17492 discloses cyclic peptides, also containing the RGD sequence, useful for treating thrombosis, through the selective inhibition of the platelet aggregation receptor GPIIb/IIa. These peptides contain also a positively charged nitrogen containing exocyclic moiety stably bonded to the cyclic peptide through a carbonyl. No beta-turns are contained in these structures.
- WO94/29349 discloses a long peptide containing a -Cys-S-S-Cys- cyclic portion for the treatment of a venous or arterial thrombotic condition.
- This trifunctional peptide combines both catalytic and anion binding exosite inhibition of thrombin with GP IIb/IIIa receptor inhibition.
- WO97/06791 discloses the use of c(RGDfV) as selective inhibitor of ⁇ v / ⁇ 5 and useful as inhibitor of angiogenesis
- WO97/08203 discloses circular RGD-containing peptides, which comprise the motif (/P)DD(G/L)(W/L)(W/L/M).
- U.S. Pat. No. 5,767,071 and U.S. Pat. No. 5,780,426 disclose non-RGD amino acid cyclic peptides binding ⁇ v / ⁇ 3 integrin receptor.
- U.S. Pat. No. 5,766,591 discloses RGD-peptides for inhibiting ⁇ v / ⁇ 3 receptor and useful as antiangiogenesis agents. No beta turn portions are taught.
- WO98/56407 and WO98/56408 disclose fibronectin antagonists as therapeutic agents and broad-spectrum enhancers of antibiotic therapy. Said fibronectin antagonists bind to a ⁇ 5 ⁇ 1 integrin to the purpose to prevent intracellular invasion by microbial pathogens. Some of these inhibitors are linear or cyclic peptides containing the RGD structure or antibodies. Integrin antagonists are specifically disclosed for their selectivity against ⁇ 5 ⁇ 1 integrin.
- U.S. Pat. No. 5,773,412 discloses a method for altering ⁇ v ⁇ 3 integrin receptor-mediated binding of a cell to a matrix, said cell being an endothelial or smooth muscle cell, by contacting said cell with a RGD-containing cyclic peptide. Also disclosed there is a method for inhibiting angiogenesis by using this cyclic peptide.
- 5,773,412 contains at least 6 amino acids and the RGD sequence is flanked, on the D-side, by a first amino acid which can provide a hydrogen bond interaction with an integrin receptor (Asn, Ser or Thr) and a second amino acid, that has the characteristics of hydrophobicity or conformational constraint (Tic, i.e. 1,2,3,4-tetrahydroisoquinoline-3-carboxylic acid, Pro, Phe or Ile).
- integrin receptor integrin receptor
- Tic hydrophobicity or conformational constraint
- a selection of these peptides are taught as useful for altering the binding of osteoclasts to a matrix such as bone or for selectively altering integrin receptor binding.
- cyclic pseudopeptides having an RGD mimetic structure characterized by an azabicycloalkane structure are endowed with selective inhibition of ⁇ v ⁇ 3 integrin-mediated cell attachment. This activity makes them useful as therapeutical agents, in particular for treating pathologies due to an altered angiogenesis, for example tumors.
- a further object of the present invention is a method for treating a subject, whether human or animal, suffering of a tumor, by inducing an inhibition of angiogenesis, in particular for inhibiting or reducing or blocking metastatic proliferation, with the administration of a therapeutic or preventive dose of at least a compound of formula (I).
- Also objects of the present invention are: a method for selectively inhibiting ⁇ v ⁇ 3 integrin-mediated cell attachment to an RGD-containing ligand, comprising contacting said ligand with an effective amount of a compound of formula (I); a method for treating a subject suffering from a pathology related to an altered ⁇ v ⁇ 3 integrin-mediated cell attachment comprising administering to said subject a compound of formula (I); said pathologies being for example retinopathy, acute renal failure, osteoporosis.
- the present invention also comprises pharmaceutical compositions comprising an effective dose of at least a compound of formula (I) in admixture with pharmaceutically acceptable vehicles and/or excipients.
- FIG. 1 represents, in an exemplary way, the general synthesis of the lactams
- FIG. 2 represents a preferred embodiment of the synthesis of 6,5-fused “cis” lactams
- FIG. 3 represents a preferred embodiment of stereoselective hydrogenation with chiral phosphine-Rh catalyst
- FIG. 4 represents a preferred embodiment of the synthesis of 7,5-fused “cis” lactams
- FIG. 5 represents a preferred embodiment of the synthesis of 5,5-fused “cis” lactams
- FIG. 6 represents another preferred embodiment of the synthesis of 5,5-fused “cis” lactams
- FIG. 7 represents a preferred embodiment of the synthesis of 6,5-fused “trans” lactams
- FIG. 8 represents a preferred embodiment of the synthesis of 7,5-fused “trans” lactams.
- FIG. 9 represents a preferred embodiment of bicyclic lactam templates Fmoc-protected
- FIG. 10 represents a preferred embodiment of linear pseudopeptides tBu-, Pmc-protected
- FIG. 11 represents a preferred embodiment of protected cyclic pseudopeptides
- FIG. 12 represents a preferred embodiment of RGD cyclic pseudopeptides
- the compounds of formula (I) are peptido-mimetics containing an RGD sequence. Said compounds can be seen as formed by an azabicycloalkane scaffold and an RGD sequence.
- a first class of preferred compounds of formula (I) are 7,5 azabicycloalkane, in particular those having trans configuration as to the positions 7 and 10 and (R) configuration as to the carbon atom at position 3.
- a second class of preferred compounds of formula (I) are 6,5 azabicycloalkane, in particular those having trans configuration as to the positions 6 and 9 and (S) configuration as to the carbon atom at position 3.
- a particularly preferred compound is the one of the following formula (also named as ST 1646).
- R is a lower all residue
- R 1 is a suitable nitrogen protecting group, to give a compound of formula (III);
- R 3 is a suitable nitrogen protecting group
- R 4 is a lower alkyl residue
- a process for the stereoselective synthesis of the compounds of formula (I), comprises the following steps:
- R is a lower alkyl residue
- R 1 is a suitable nitrogen protecting group, to give a compound of formula (III);
- R 3 is a suitable nitrogen protecting group
- R 4 is a lower alkyl residue
- alkyl residue it is normally understood a C 1 -C 4 alkyl, for example, methyl, ethyl, propyl, butyl and all the possible isomers, but also higher alkyls are suitable, provided their compatibility with reaction conditions.
- suitable nitrogen protecting groups the skilled person is able to select, according the general common knowledge, the suitable protecting group, as it will appear from the following examples, but also in the available technical literature and commercial catalogues.
- compositions comprising a therapeutically or preventive effective dose of at least a compound of formula (I) in admixture with pharmaceutically acceptable vehicles and/or excipients.
- the present invention advantageously teaches a method for selectively inhibiting ⁇ v ⁇ 3 integrin-mediated cell attachment to an RGD-containing ligand, comprising contacting said ligand with an effective amount of a compound of formula (I), a method for treating a subject suffering from altered angiogenesis, comprising administering to said subject a compound of formula (I), a method for the treatment of tumors in a subject comprising administering to said subject a compound of formula (I), optionally in combination with other active ingredients, in particular other antitumour agents.
- Lubell et al. employed for the preparation of enantiopure indolizidinone-type 6,5-fused bicyclic lactams (H. -G. Lombartet al.: J. Org. Chem. 1996, 61, 9437-9446.-F. Polyak et al.: J. Org. Chem. 1998, 63, 5937-5949 and references therein for the syntheses of azabicycloalkane amino acids—F. Gosselin et al.: J. Org. Chem. 1998, 63, 7463-7471).
- the beta-turn portion of the cyclic peptide consists in an azabicycloalkane amino acid scaffold, selected from a 5,5-, 6,5- or 7,5-fused bicyclic lactams.
- an azabicycloalkane amino acid scaffold selected from a 5,5-, 6,5- or 7,5-fused bicyclic lactams.
- 6,5-and 7,5-fused 1-aza-2-oxabicyclo[X.3.0]alkane amino acids have been synthesised, using radical (L. Colombo et al.: Tetrahedron Lett. 1995, 36, 625-628.-L. Colombo et al.: Gazz. Chim. It. 1996, 126, 543-554) or ionic reactions (L. Colombo et al. Tetrahedron 1998, 54, 5325-5336).
- the present invention provides an improved reaction sequence, amenable to large scale preparation, and allowing the synthesis of different bicyclic lactams from common intermediates, as described in the appended FIG. 1.
- lactams 1-12 follows the common steps reported in FIG. 1. Starting from the cis or trans 5-alkyl proline aldehydes 13-18, a Horner-Emmons olefination with the potassium enolate of ( ⁇ )-Z- ⁇ -phosphonoglycine trimethyl ester (U. Schmidt, A. Lieberknecht, J. Wild, Synthesis 1984, 53-60) sets up the necessary carbon chain. Following protecting group manipulation (vide infra), reduction of the enamino acrylic acids and treatment with condensing agents gives the lactams of both the “cis” and “trans” series in good yields.
- the synthetic scheme is best illustrated by the synthesis of the 6,5-fused “cis”-lactams 2 a and 8 a (FIG. 3).
- the necessary cis aldehyde 14 is obtained from the known cis 5-allyl-proline derivative 25 (M. V. Chiesa, L. Manzoni, C. Scolastico, Synlett 1996, 441-443) and reacted with the commercially available phosphonate 26 (U. Schmidt, A. Lieberknecht, J. Wild, Synthesis 1984, 53-60) to give 20 in 98% yield and 7:1 Z:E ratio.
- Chiral phosphine-Rh catalyst is well-known to represent a powerful and well-established way of access to naturally and non-naturally occurring amino acids and the catalytic asymmetric hydrogenation of dehydropeptides is the logical extension of this methodology to the preparation of biologically active chiral oligo- and polypeptides.
- the ligands investigated are (R)-Prophos 29 and (+) or ( ⁇ ) BitianP 30 and 31.
- BitianP is a chiral atropisomeric chelating phosphine belonging to a new class of ligands based on biheteroaromatic framework, which gives very high e.e. % in the asymmetric hydrogenation of olefins and ketones.
- lactams 1 - 12 can be synthesised following essentially the same sequence described above.
- the 7,5-fused lactams 3 a and 9 a (FIG. 4) can be made starting from the cis aldehyde 15 , easily prepared from the cis 5-allyl proline 25 .
- Horner-Emmons reaction of 15 with 26 gives a 6:1 Z:E mixture of enamino acrylates. After N-protection they are reduced with H 2 /Pd-C.
- the thermic cyclisation of methyl ester 34 can be carried out in a suitable solvent, for example xylene.
- a suitable solvent for example xylene.
- the starting material for the synthesis of the 5,5-fused “cis” lactams is alcohol 36 .
- Hydrogenation of 37 results in a complex mixture of products, from which the 1,2 diamino ester 38 is anyway isolated in 40% yield.
- the formation of 38 may result from initial N-debenzylation of 37 followed by intramolecular Michael addition to the enamino ester double bond and hydrogenolysis of the resulting aziridine.
- the problem can be partly circumvented by performing the hydrogenation starting from the acid 39 .
- the protected amino acid is condensed on a suitable resin, for example a Wang-Merrifield resin.
- a suitable resin for example a Wang-Merrifield resin.
- Protecting groups are known in this art. 9-fluorenylmethoxycarbonyl (FMOC) is preferred.
- N-FMOC-Gly is attached to the Wang-Merrifield resin by means of a suitable condensing agent, preferably diisopropylcarbodiimide (DIC) /1-hydroxybenzotiazole (HOBt)/4-dimethylaminopyridine (DMAP) (J.Org. Chem, 1996, 61, 6735-6738.
- DIC diisopropylcarbodiimide
- HOBt /1-hydroxybenzotiazole
- DMAP dimethylaminopyridine
- N-FMOC-Arg(Pmc)OH is attached, followed by the bicyclic N-FMOC-lactam (IIIa) or (IIIb) and finally N-FMOC-Asp (tBu) OH.
- the solid phase synthesis of cyclic peptides containing the RGD sequence bonded to the bicyclic lactam was performed with 9-flourenylmethoxy carbonyl (Fmoc) strategy.
- Fmoc 9-flourenylmethoxy carbonyl
- the synthesis was performed using Merrifield solid phase peptide synthesis with SASRIN (Super Acid Sensitive Resin) applying Fmoc strategy.
- the Fmoc-protected aminoacid and bicyclic lactams were coupled with HOAT (Azahydroxy Benzotriazole) in the presence of DIC (Diisopropylcarbodiimide) or with HOAT/HATU ⁇ Azahydroxy Benzotriazole)/ ⁇ O-(7-Azabenzotriazol-1-yl)-N,N,N′,N′-tetramethyluronioesafluorophosphate ⁇ using collidine as base.
- Peptides were cleaved from SASRIN solid support by 1% TFA in DCM and subsequent neutralisation of TFA with Py. This procedure leads to peptides with intact side chain protective groups. Final cyclization was performed in the same conditions i.e. HOAT/HATU and final deprotection was done with trifluoroacetic acid in the presence of scavengers to avoid side alkylations.
- the compounds of the present invention are endowed with interesting physiological properties, which make them useful as medicaments.
- the compounds of formula (I) herein disclosed are selective antagonists of ⁇ v ⁇ 3 integrins.
- This antagonist activity provides the use of said compounds for the preparation of medicaments useful in inhibiting the action of ⁇ v ⁇ 3 integrins.
- said medicaments will be used in the treatment of tumors, namely in inhibiting tumor growth and/or angiogenesis or metastasis.
- ⁇ v ⁇ 3 was diluted at 500 ng/ml in coating buffer (20 mM Tris, pH 7.4, 150 mM NaCl, 2 mM CaCl 2 , 1 mM MgCl 2 , 1 mM MnCl 2 ) and an aliquot of 100 ⁇ l/well was added to a 96-well microtiter plate and incubated overnight at 4° C.
- the plate was washed once with blocking/binding buffer (50 mM Tris, pH 7.4, 100 mM NaCl, 2 mM CaCl 2 , 1 mM MgCl 2 , 1 mM MnCl 2 , 1% bovine serum albumin), and incubated an additional 2 h at room temperature.
- the plate was rinsed twice with the same buffer and incubated with radiolabelled ligand at the indicated concentrations.
- unlabelled competitor and competing peptides were included at the concentration described. After additional three washing, counts were solubilized with boiling 2N NaOH and subjected to y-counting.
- Bovine microvascular endothelial cells were maintained in DMEM supplemented with 20% foetal calf serum, 50 units/ml heparin, 50 ⁇ g/ml bovine brain extract, 100 units/ml gentamycin.
- BMEC were cultured on 1% gelatine-coated culture flasks and employed in experiments between passage 6-12.
- PC3 Human prostate carcinoma cells
- ATCC American Type Collection Culture
- RPMI RPMI supplemented with 10% foetal calf serum, 10 mM L-glutamine, 1% sodium piruvate and 100 units/ml gentamicin.
- Murine lung carcinoma cells were purchased from American Type Collection Culture (ATCC) and maintained in RPMI supplemented with 10% foetal calf serum, 10 mM L-glutamine and 100 units/ml gentamicin.
- Stained cells were solubilized with 1% SDS and quantified on a microtiter plate reader at 600 nm.
- IC 50 the concentration of compounds required for 50% inhibition of echistatin binding, were estimated graphically by program Allfit. The Ki of the competing ligands were calculated according to the Cheng and Prusoff equation.
- transmembrane ⁇ integrins family are involved in adhesion of endothelial cells to extracellular matrix proteins we assayed adhesion inhibition of bovine microvascular endothelial cells (BMEC) to both vitronectin and fibronectin when these cells were treated with different concentration of our cyclic RGD.
- BMEC bovine microvascular endothelial cells
- the cyclic RGD peptide ST1646 was the more effective in inhibiting adhesion than the other peptide tested. Since vitronectin is a more specific ligand of ⁇ v ⁇ 3 integrin than fibronectin we observed that the RGD tested were able to more efficiently inhibit adhesion of BMEC cells on vitronectin than on fibronectin coated plates (Compare Table 3 with Table 4). Comparing adhesion inhibition, we observed that the cyclic RGD ST1646 was about 10 time more effective than the Kessler peptide inhibiting adhesion of BMEC cells to both fibronectin and vitronectin (see Table 5).
- HMEC microvascular endothelial cells
- PC3 human prostate carcinoma cells
- M109 murine lung carcinoma cells
- the percentages of adhesion inhibition refer to 100 M concentration of each peptide of and it's calculated by the following formula (control ⁇ sample/control ⁇ 100) where control was RGD untreated sample. Each percentage is the mean of 4 independent samples treated with the same peptide.
- the t-test has been calculated, using the Mann Witney non parametric test, by the instat program. TABLE 4 Adhesion inhibition of BMEC to Fibronectin RGD % inhibition t-test versus control KESSLER 30 P ⁇ 0.0001 ST 1646 60 P ⁇ 0.0001
- the percentages of adhesion inhibition refer to 100 ⁇ M concentration of each peptide of and it's calculated by the following formula (control ⁇ sample/control ⁇ 100) where control was RGD untreated sample. Each percentage is the mean of 4 independent samples treated with the same peptide. The t-test has been calculated, using the Mann Witney non parametric test, by the instat program. TABLE 5 IC50 of adhesion inhibition of BMEC IC 50 ( ⁇ M) RGD Fibronectin Vitronectin KESSLER >100 7.8 ⁇ 1.2 ST 1646 44 ⁇ 4 0.8 ⁇ 0.06
- the IC 50 represents the average value of 3 experiments and indicates that RGD peptide concentration able to inhibit the 50% of cell adhesion.
- the percentages of adhesion inhibition refer to 1.5 ⁇ M concentration of each peptide and were calculated by the following formula (control ⁇ sample/control ⁇ 100) where control was RGD untreated sample.
- TABLE 6(b) Adhesion assay on Vitronectin PC3 CELLS % IC 50 t-test versus RGD Inhibition ( ⁇ M) control KESSLER 69 2.5 ⁇ 0.2 P ⁇ 0.0001 ST 1646 96 0.3 ⁇ 0.08 P ⁇ 0.0001
- the IC 50 represents the average value of 3 experiments and indicates that RGD peptide concentration able to inhibit the 50% of cell adhesion.
- the percentages of adhesion inhibition refer to 1.5 ⁇ M concentration of each peptide and were calculated by the following formula (control ⁇ sample/control ⁇ 100) where control was RGD untreated sample.
- TABLE 6(c) Adhesion assay on Vitronectin M109 CELLS % IC 50 t-test versus RGD Inhibition ( ⁇ M) control KESSLER 70 0.46 ⁇ 0.5 P ⁇ 0.0001 ST 1646 99 0.048 ⁇ 0.06 P ⁇ 0.0001
- the IC 50 represents the average value of 3 experiments and indicates that RGD peptide concentration able to inhibit the 50% of cell adhesion.
- the percentages of adhesion inhibition refer to 1.5 ⁇ M concentration of each peptide and were calculated by the following formula (control ⁇ sample/control ⁇ 100) where control was RGD untreated sample.
- the t-test has been calculated using the Mann Witney non parametric test, by the instat program. In the top left side of the two panels it's shown the cell type the adhesion experiment it's referred to.
- mice were injected i.m. with M109 lung carcinoma cells (3 ⁇ 10 5 cells/mouse) into the hind leg muscle.
- M109 lung carcinoma cells 3 ⁇ 10 5 cells/mouse
- Tumors were excised at day 10 th after tumor implant. Mice were sacrificed at day 16 th from tumor implant and lungs were removed. The number of lung metastases has been evaluated on tumor-excised mice (3 mice/group) using a dissecting microscope.
- TVI % tumor volume inhibition
- Angiogenesis on CAM (chicken embryo chorioallantoic membrane) assay has been quantified by counting the number of vessels interfacing the implanted gelatin sponge on each embryos and calculating the average for each single experimental point (6-8 eggs for peptide concentration).
- a single treatment means that the embryo received the peptide, at the concentration indicated in the table, only one times at the beginning of the experiment while in the repeated treatment the peptide has been added to the embryo every day for three days.
- Table 8 In some experiments we have refereed our sample to control where angiogenesis occurred spontaneously on the chorioallantoic membrane during embryo development (Table 8). In others experiment (Table 9) instead we have used control where angiogenesis has been stimulated by bFGF (400 ng/embryo).
- Inhibition (%) [(mean vessels treated group ⁇ mean vessels control group)/control group] ⁇ 100 TABLE 9 Angiogenesis inhibition on the chorioallantoic membrane where angiogenesis has been stimulated by bFGF. Inhibiton Standard Deviation Treatment (%) (%) Control bFGF (400 ng) 0 ST1646 ⁇ 56 ⁇ 18 (100 ⁇ g single treatment) ST1646 ⁇ 84 ⁇ 30 (100 ⁇ g repeated treatment)
- Inhibition (%) [(mean vessels treated group ⁇ mean vessels control group)/control group] ⁇ 100
- ST 1646 shows a good selectivity towards cellular ⁇ v ⁇ 3 integrin implicated in binding to vitronectin substrates.
- ST 1646 inhibits the growth of M109 lung metastasis (table 7).
- ST 1646 strongly inhibits angiogenesis both in FGF-induced and spontaneous angionenesis (table 8 and 9 respectively). This results show that ST 1646 is a very effective antitumoral and antiangiogenic compound.
- the compounds of the present invention have azabicycloalkane structure and contain the RGD (Arg-Gly-Asp) sequence are selective inhibitors of ⁇ v ⁇ 3 receptor, and they are useful agents for treating pathologies due to an altered activation of the ⁇ v ⁇ 3 receptor. It is well known that the activation of ⁇ v ⁇ 3 receptor is linked to several pathological processes.
- the compounds of formula (I) shall be suitably formulated in pharmaceutical compositions.
- Said compositions will comprise at least one compound of formula (I) in admixture with pharmaceutically acceptable vehicles and/or excipients.
- the pharmaceutical compositions according to the present invention will be administered by enteral or parenteral route.
- Enteral pharmaceutical compositions may be both in the liquid or solid from, for example tablets, capsules, pills, powders, sachets, freeze dried powders to be readily dissolved or in any other way soluble powders, solutions, suspensions, emulsions.
- Parenteral formulation will be in injectable form, as solutions, suspensions, emulsions or in powdery form to be dissolved immediately before use.
- Other administration routes are also provided for example intranasal, transdermal or subcutaneous implant.
- Special pharmaceutical compositions can also be provided.
- controlled release formulations or particular vehicles for example liposomes.
- the dosage will be established according to the type of the pathology to be treated, its severity, and the conditions of the patient (weight, age, and sex).
- Examples 1-12 may be read easier by making reference to FIGS. 1 - 8 .
- the aqueous phase was extracted with AcOEt, the collected organic phases were dried over Na 2 SO 4 , filtered and evaporated under reduced pressure, the crude was purified by flash chromatography (hexane/ethyl acetate), yielding the alcohol as yellow oil.
- Enamide ( 37 ) The general procedure D was followed using 36 and the crude was purified by flash chromatography (hexane/ethyl acetate, 7:3), yielding the aldehyde (81%) as an oil.
- Amino acid ( 39 ) To a solution of 37 (0.424 g, 0.713 mmol) in MeOH (4 ml) was added IN NaOH (4 mmol, 4 ml) and stirred for 1.5 h. The solution was acidified until pH 3 with 1N HCl, then the solution was evaporated. The crude was submitted to the next reaction without further purification.
- trans-7,5-fused Bicyclic Lactam ( 6 a , 12 a ):
- Examples 14-47 may be read easier by making reference to FIGS. 9 - 12 .
- Reagents and solvents Sasrin resin (200-400 mesh, 1.02 mmol/g) was purchased from Bachem. All the solvents used for the solid-phase synthesis were of HPLC quality or Analyticai Reagent grade and were dried over molecular sieves before use. Flash chromatography: silica gel (Kieselgel 60, 230-400 mesh). TLC: silica plates (60 F 254 , 0.25 mm, Merck).
- NMR Bruker AC-200, AC-300 and Avance-400 (200 MHz, 300 MHz and 400 MHz for 1 H, 50.3 MHz, 75.4 MHz and 100.5 MHz for 13 C).
- Optical rotations Perkin Elmer 241 polarimeter.
- Mass spectrometry VG 7070 EQ-HF and PE-SCIEX API-100. Elemental analysis: Perkin Elmer 240. All solid-phase reaction were carried out on a wrist shaker.
- DCM dichloromethane
- DIC N,N′-diisopropylcarbodiimide
- HOAt 1-hydroxy-7-azabenzotriazole
- HOBt 1-hydroxybenzotriazole
- HATU 0-(7-azabenzotriazol-1-yl)-N,N,N′,N′-tetramethyluronium hexafluorophosphate
- TNBS 2,4,6-trinitrobenzenesulfonic acid.
- TNBS test was performed following this procedure: a few resin beads were sampled and washed several times with ethanol. The sample was then placed in a vial and 1 drop of a 10% solution of DEPEA in DMF and 1 drop of 1% 2,4,6-trinitrobenzenesulfonic acid (TNBS) in DMF were added. The sample was then observed and colour changes were noted. The TNBS test is considered to be positive (presence of free amino groups) when the resin beads turn orange or red within 1 min and negative (no free amino groups) when the beads remain colourless.
- the possibly unreacted hydroxy groups present were capped by treatment with a solution of acetic anhydride (0.096 ml, 1 mmol) and DMAP (57 mg, 0.51 mmol) in DMF (12 ml) for 2 h. The solution was drained and the resin washed with DMF (3 ⁇ 10 ml) and DCM (3 ⁇ 10 ml).
- N-Fmoc-Gly-O-Sasrin resin (0.51 mmol) was treated with a 20% piperidine/DMF solution (10 ml, 1 ⁇ 3 min, 2 ⁇ 17 min). The solution was drained and the resin was washed with DMF (3 ⁇ 10 ml), MeOH (2 ⁇ 10 ml) and DCM (3 ⁇ 10 ml). The deprotection was assessed by performing a TNBS test. N-Fmoc-Arg(Pmc)-OH (1.014 g, 1.53 mmol) and HOAt (208 mg, 1.53 mmol) were dissolved in DCM/DMF 2:1 (10 ml).
- N-Fmoc-Arg(Pmc)-Gly-O-Sasrin resin (0.51 mmol) was treated with a 20% piperidine/DMF solution (10 ml, 1 ⁇ 3 min, 2 ⁇ 17 min). The solution was drained and the resin was washed with DMF (3 ⁇ 10 ml), MeOH (2 ⁇ 10 ml) and DCM (3 ⁇ 10 ml). The deprotection was assessed by performing a TNBS test.
- the resin was suspended in a solution of N-Fmoc-Temp-OH (0.54 mmol), HATU (387 mg, 1.02 mmol), HOAt (139 mg, 1.02 mmol) and 2,4,6-collidine (0.135 ml, 1.02 mmol) in DMF/DCM 3:1 (13 ml) for 15 h.
- the solution was drained and the resin was washed with DMF (3 ⁇ 10 ml), MeOH (2 ⁇ 10 ml) and DCM (3 ⁇ 10 ml).
- the success of the coupling was assessed by performing a TNBS test.
- the unreacted amino groups possibly present were capped by treatment with a solution of acetylimidazole (560 mg, 5.1 mmol) in DCM (12 ml) for 2 h. The solution was drained and the resin was washed with DCM (3 ⁇ 10 ml).
- N-Fmoc-Temp-Arg(Pmc)-Gly-O-Sasrin resin (0.51 mmol) was treated with a 20% piperidine/DMF solution (10 ml, 1 ⁇ 3 min, 2 ⁇ 17 min). The solution was drained and the resin was washed with DMF (3 ⁇ 10 ml), MeOH (2 ⁇ 10 ml) and DCM (3 ⁇ 10 Ml). The deprotection was assessed by performing a TN-BS test.
- the resin was suspended in a solution of N-Fmoc-Asp(tBu)-OH (840 mg, 2.04 mmol), HATU (776 mg, 2.04 mmol), HOAt (278 mg, 2.04 mmol) and 2,4,6-collidine (0.27 ml, 2.04 mmol) in DMF/DCM 3:1 (13 ml) for 15 h.
- the solution was drained and the resin was washed with DMF (3 ⁇ 10 ml), MeOH (2 ⁇ 10 ml) and DCM (3 ⁇ 10 ml).
- the success of the coupling was assessed by performing a TNBS test.
- the unreacted amino groups possibly present were capped by treatment with a solution of acetylimidazole (560 mg, 5.1 mmol) in DCM (12 Ml) for 2 h. The solution was drained and the resin was washed with DCM (3 ⁇ 10 ml).
- N-Fmoc-Asp(tBu)-Temp-Arg(Pmc)-Gly-O-Sasrin resin (739 mg) was treated with a 20% piperidine/DMF solution (10 ml, 1 ⁇ 3 min, 2 ⁇ 17 min). The solution was drained and the resin was washed with DMF (3 ⁇ 10 ml), MeOH (2 ⁇ 10 ml) and DCM (3 ⁇ 10 ml). The deprotection was assessed by performing a TNBS test. The resin was treated with 1% TFA/DCM solution (7.4 ml ⁇ 3 min). The filtrates were immediately neutralized with a 18% pyridine/MeOH solution (0.89 ml).
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Abstract
wherein n is the number 0, 1 or 2. There are also disclosed processes for the preparation of said compounds, together with methods for treating pathologies related to an altered αvβ3 integrin-mediated cell attachment, in particular wherein the inhibition of angiogenesis is desired, for example in tumors, also associated with metastasis.
Description
- The present invention relates to cyclic peptido-mimetic compounds, in particular to cyclic peptido-mimetic compounds having azabicycloalkane structure and containing the RGD (Arg-Gly-Asp) sequence. Said compounds have inhibiting action on αvβ3 -receptor of the integrin family. The compounds of the present invention are endowed with antiangiogenic properties, hence are useful as medicaments, preferably for the treatment of tumors.
- The first molecule with antiangiogenic activity was discovered in 1975 by Henry Brem and Judah Folkman in cartilaginous tissues.
- In the 80s it was found that interferon (α/β) is effective in inhibiting tumor angiogenesis.
- In 1998, it was widely published, also in the media, that angiostatin and endostatin discovered by J.Folkman at Harvard Medicinal School and Boston Children's Hospital were giving very encouraging results in tumor treatment.
- To-date, about 30 molecules are tested in clinical trials (Phase I-III).
- Of these 30 molecules, only two drugs, of which one is an antibody, are in clinical trials for their activity in inhibiting endothelial specific integrins.
- It is calculated that only in the USA, about 9 million patients could benefit from an antiangiogenic therapy.
- Recently, FDA has approved clinical trials for the combination of IL-10 with Thalidomide and Methoxyestradiol.
- Angiogenesis is intended as the formation of new capillary blood vessels. This natural phenomenon is involved both in physiological processes, as reproduction, and in pathological occurrences, as wound healing, arthritis and tumor vascularization.
- A number of growth factors have been identified as capable of promoting angiogenesis, through direct induction of proliferation and/or chemiotaxis of endothelial cells. Other factors, instead, act indirectly, by stimulating other cell types (mast cells, macrophages), which, on their turn, produce angiogenic factors. The presence of growth factors, such as bFGF and VEGF, near a resting capillary net, suggested that angiogenesis might be the outcome of an unbalance between pro-and anti-angiogenic factors.
- In the last years, it was reported that tumor growth and metastasis formation is strictly dependent on the development of new vessels capable of vascularizing the tumor mass.
- Antiangiogenic tumor therapy is strongly desired by physicians for the following reasons:
- specificity: tumor neovascularization is the target;
- bioavailability: the antiangiogenic agent is targeted toward endothelial cells, easily reached without the well-known problems of chemotherapy, which is directed on the tumor cell;
- chemoresistance: this is the most striking advantage, in fact, endothelial cells are genetically stable and it is quite difficult to observe drug resistance;
- angiogenic blockade avoids metastatic cells to diffuse through blood circulation;
- apoptosis: blocking angiogenesis makes tumor cell suffer from oxygen and nutrition lack, thus inducing apoptosis;
- antiangiogenic therapy does not give rise to side effects typical of chemotherapy.
- The endogenous pro-angiogenic factors to date known are acid/basic Fibroblast Growth factor (a/bFGF) and Vascular Endothelial Growth Factor (VEGF), and its subtype B and C, Angiogenin, Endothelial Growth Factor (EGF), Platelet derived-Endothelial Cell Growth Factor (PD-ECGF), Transforming Growth Factor-α (TGF-α), Transforming Growth Factor-β (TGF-β), Tumor Necrosis Factor-α (TNF-α).
- Retinoids are tested as potential antiangiogenic agents.
- Some PK-C inhibitors, such as Calphostin-C, phorbol esters and Staurosporin, can block angiogenesis, either partially or totally.
- Integrins are a class of receptors involved in the mechanism of cell adhesion and alterations in the function of these receptors are responsible in the occurrence of a number of pathologic manifestations, for example embryogenic development, blood coagulation, osteoporosis, acute renal failure, retinopathy, cancer, in particular metastasis. Among the molecular targets involved in angiogenesis, αvβ3 integrins play an important role in adhesion, motility, growth and differentiation of endothelial cells. αvβ3 integrins bind the RGD sequence (Arg-Gly-Asp), which constitutes the recognition domain of different proteins, such as laminin, fibronectin and vitronectin. The RGD sequence represent the minimal amino acid domain, in several extra-cellular matrix proteins, which has been demonstrated to be the binding site of the transmembrane integrins proteins family (G. Bazzoni, E. Dejana and M. G. Lampugnani. 1999, Current Opinion in Cell Biology; (11) pp. 573-581). Indeed replacement of just one single amino acid of this short sequence result in loss of binding activity to integrins (F. E. Ali, R. Calvo, T. Romoff, I. Samanen, A. Nichols. 1990, Peptides: Chemistry. Structure and Biology (Eds: J. E. Rivier, G. R. Marshall) ESCOM Science Leiden (Netherland) pp. 94-96). In the last years has been demonstrated that RGD peptide isolated from phage peptides library or biochemically synthesised, were able to compete with extracellular matrix proteins to bind integrins (R. Haubner, D. Fisinger and H. Kessler. 1997, Angew. Chem. Int. Ed. Engl. ; (36) pp. 1374-1389).
- The role of RGD sequence is described, for example, in Grant et al., J. Cell Physiology, 1992, Saiki et al., Jpn. J. Cancer Res. 81; 668-75. Carron et al, 1998, Cancer Res. 1; 58(9):1930-5 disclosed an RGD-containing tripeptide, named SC-68448, capable of inhibiting the binding between αvβ3 integrin with vitronectin (IC50=1 nM). Other works (Sheu et al., 1197, BBA; 1336(3):445-54-Buckle at al., 1999, Nature 397:534-9) showed that RGD peptides can diffuse through the cell membrane and bind to the protein caspase-3, inducing apoptosis.
- Therefore, RGD sequence is the basis for developing antagonists of the different integrins. To date, the reasons for which in many cases a high selectivity for certain integrins is observed is not quite clear, although a different conformation of the RGD sequence can be taken as an explanation. Recent data demonstrated that this sequence is often inserted into a type II-β-turn between two β-sheets extending from the core of the protein.
- Thus the problem to provide substances having high selectivity toward integrins has not been fully satisfied yet.
- There is a structural constraint to this research, namely, the RGD sequence must be kept unaltered, since it is well known that any modification to this sequence implies a loss of activity.
- To find the correct structure that can block the molecule in a precise reverse-turn conformation, inducing a β-turn geometry, is very critical.
- It is well known that the αvβ3-receptor, a member of the integrin family, is implicated in angiogenesis and in human tumor metastasis.
- Metastasis of several tumor cell lines as well as tumor-induced angiogenesis can be inhibited by antibodies or small, synthetic peptides acting as ligands for these receptors (Friedlander et al.: Science 1995, 270, 1500-1502.
- In order to have an inhibiting property, all the peptides must contain the Arg-Gly-Asp (RGD) sequence. Notwithstanding this RGD sequence, a high substrate specificity is present, due to different conformations of the RGD sequence in different matrix proteins (Ruoshlati et al. Science 1987, 238, 491-497). This flexibility of particular RGD portion is an obstacle to the determination of the bioactive conformation to be used in the widespread structure-activity drug design.
- A solution was provided by Haubner et al. (J. Am. Chem. Soc. 1996, 118, 7881-7891) by inserting the RGD sequence in cyclic, rigid peptide structure. Spatial screening led to the highly active first-generation peptide c(RGDfV) (cyclic Arg-Gly-Asp-D-Phe-Val; WO97/06791), which shows a βII′/γ-turn arrangement. A reduction of the flexibility is a technical goal to be achieved in order to obtain antagonists of integrins. Due to the width of the integrin family and to the number of different physiological activities of said integrins, it is highly desired to obtain active agents having highly selective inhibiting action.
- A solution proposed in the art was to introduce in the peptido-mimetic structure a rigid building block (turn mimetics).
- Despite different tentatives and a number of structures proposed, Haubner et al. (J. Am. Chem. Soc. 1996, 118, 7881-7891), identified an RGD“spiro” structure capable of providing the desired βII′/γ-turn arrangement. Actually, four different structures are enabled in this work: an (S)-proline derivative, an (R)-proline derivative, a thiazabicyclo structure and a diaza-spiro-bicyclic structure. Non-homogeneous results were obtained. The spiro structure was the only one able to adopt a βII′/γ-turn conformation, but lacks of biological activity. The (R)-proline is very active, but less selective. The (S)-proline is active and selective. The thiazabicyclo-structure is active, but has the disadvantage to be less selective.
- WO91/15515 discloses cyclic peptides, also containing the RGD sequence, useful for treating thrombosis, through the selective inhibition of the platelet aggregation receptor GPIIb/IIa.
- WO92/17492 discloses cyclic peptides, also containing the RGD sequence, useful for treating thrombosis, through the selective inhibition of the platelet aggregation receptor GPIIb/IIa. These peptides contain also a positively charged nitrogen containing exocyclic moiety stably bonded to the cyclic peptide through a carbonyl. No beta-turns are contained in these structures.
- WO94/29349 discloses a long peptide containing a -Cys-S-S-Cys- cyclic portion for the treatment of a venous or arterial thrombotic condition. This trifunctional peptide combines both catalytic and anion binding exosite inhibition of thrombin with GP IIb/IIIa receptor inhibition.
- Other peptides active in treating thrombosis are disclosed in WO95/00544.
- WO97/06791 discloses the use of c(RGDfV) as selective inhibitor of αv/γ5 and useful as inhibitor of angiogenesis
- WO97/08203 discloses circular RGD-containing peptides, which comprise the motif (/P)DD(G/L)(W/L)(W/L/M).
- U.S. Pat. No. 5,767,071 and U.S. Pat. No. 5,780,426 disclose non-RGD amino acid cyclic peptides binding αv/γ3 integrin receptor.
- U.S. Pat. No. 5,766,591 discloses RGD-peptides for inhibiting αv/γ3 receptor and useful as antiangiogenesis agents. No beta turn portions are taught.
- WO98/56407 and WO98/56408 disclose fibronectin antagonists as therapeutic agents and broad-spectrum enhancers of antibiotic therapy. Said fibronectin antagonists bind to a α5β1 integrin to the purpose to prevent intracellular invasion by microbial pathogens. Some of these inhibitors are linear or cyclic peptides containing the RGD structure or antibodies. Integrin antagonists are specifically disclosed for their selectivity against α5β1 integrin. The best of them proved to be (S)-2-[2,4,6-trimethylphenyl) sulfonyl]amino-3-[[7benzyloxycarbonyl-8-(2-pyridinylaminomethyl)-1-oxa-2,7-diazaspiro- [4,4] -non-2-en-3-yl]carbonylamino]propionic acid.
- U.S. Pat. No. 5,773,412 discloses a method for altering αvβ3 integrin receptor-mediated binding of a cell to a matrix, said cell being an endothelial or smooth muscle cell, by contacting said cell with a RGD-containing cyclic peptide. Also disclosed there is a method for inhibiting angiogenesis by using this cyclic peptide. The cyclic peptide disclosed in U.S. Pat. No. 5,773,412 contains at least 6 amino acids and the RGD sequence is flanked, on the D-side, by a first amino acid which can provide a hydrogen bond interaction with an integrin receptor (Asn, Ser or Thr) and a second amino acid, that has the characteristics of hydrophobicity or conformational constraint (Tic, i.e. 1,2,3,4-tetrahydroisoquinoline-3-carboxylic acid, Pro, Phe or Ile). A selection of these peptides are taught as useful for altering the binding of osteoclasts to a matrix such as bone or for selectively altering integrin receptor binding. It has now been found that cyclic pseudopeptides having an RGD mimetic structure characterized by an azabicycloalkane structure are endowed with selective inhibition of αvβ3 integrin-mediated cell attachment. This activity makes them useful as therapeutical agents, in particular for treating pathologies due to an altered angiogenesis, for example tumors.
- A further object of the present invention is a method for treating a subject, whether human or animal, suffering of a tumor, by inducing an inhibition of angiogenesis, in particular for inhibiting or reducing or blocking metastatic proliferation, with the administration of a therapeutic or preventive dose of at least a compound of formula (I). Also objects of the present invention are: a method for selectively inhibiting αvβ3 integrin-mediated cell attachment to an RGD-containing ligand, comprising contacting said ligand with an effective amount of a compound of formula (I); a method for treating a subject suffering from a pathology related to an altered αvβ 3 integrin-mediated cell attachment comprising administering to said subject a compound of formula (I); said pathologies being for example retinopathy, acute renal failure, osteoporosis.
- From the industrial application point of view, the present invention also comprises pharmaceutical compositions comprising an effective dose of at least a compound of formula (I) in admixture with pharmaceutically acceptable vehicles and/or excipients.
- The present invention shall be disclosed in detail in the foregoing also by means of examples and figures, wherein, in the figures:
- FIG. 1 represents, in an exemplary way, the general synthesis of the lactams;
- FIG. 2 represents a preferred embodiment of the synthesis of 6,5-fused “cis” lactams;
- FIG. 3 represents a preferred embodiment of stereoselective hydrogenation with chiral phosphine-Rh catalyst;
- FIG. 4 represents a preferred embodiment of the synthesis of 7,5-fused “cis” lactams;
- FIG. 5 represents a preferred embodiment of the synthesis of 5,5-fused “cis” lactams;
- FIG. 6 represents another preferred embodiment of the synthesis of 5,5-fused “cis” lactams;
- FIG. 7 represents a preferred embodiment of the synthesis of 6,5-fused “trans” lactams;
- FIG. 8 represents a preferred embodiment of the synthesis of 7,5-fused “trans” lactams.
- FIG. 9 represents a preferred embodiment of bicyclic lactam templates Fmoc-protected;
- FIG. 10 represents a preferred embodiment of linear pseudopeptides tBu-, Pmc-protected;
- FIG. 11 represents a preferred embodiment of protected cyclic pseudopeptides;
- FIG. 12 represents a preferred embodiment of RGD cyclic pseudopeptides;
- In its broadest aspects, the present invention relates to compounds of the above formula (I).
- The compounds of formula (I) are peptido-mimetics containing an RGD sequence. Said compounds can be seen as formed by an azabicycloalkane scaffold and an RGD sequence.
- For sake of clarity, in formula (I), there is a variable part, given by the different values of n, and a fixed part, given by the RGD sequence. When n is 0, the scaffold is referred to as 5,5 azabicycloalkane, when n is 1, the scaffold is referred to as 6,5 azabicycloalkane and when n is 2, the scaffold is referred to as 7,5 azabicycloalkane. The bonds written in formula (I) as a wavy line represents a stereo bond, which can be either above the plane of the page (thick bond) either below the plane of the page (thin bond). The compounds of formula (I) can exist in different stereoisomers, according to the orientation of the wavy bond.
- A first class of preferred compounds of formula (I) are 7,5 azabicycloalkane, in particular those having trans configuration as to the
positions position 3. - A second class of preferred compounds of formula (I) are 6,5 azabicycloalkane, in particular those having trans configuration as to the
positions position 3. -
-
- Within the boundaries of the present invention, there is disclosed a process for the preparation of the compounds of formula (I), comprising the following steps:
-
- wherein
- R is a lower all residue;
-
- wherein R3 is a suitable nitrogen protecting group, R4 is a lower alkyl residue;
- b) hydrogenation of said compound of formula (III) and cyclisation; and, if desired
- c) separation of the stereoisomeric mixture;
- d) building of the RGD cyclic sequence, and if desired
- e) separation of the stereoisomeric mixture.
- A process for the stereoselective synthesis of the compounds of formula (I), comprises the following steps:
-
- wherein
- R is a lower alkyl residue;
-
- wherein R3 is a suitable nitrogen protecting group, R4 is a lower alkyl residue;
- b) hydrogenation of said compound of formula (III) by chiral phosphine-Rh catalysed hydrogenation and cyclisation; and, if desired
- c) separation of the stereoisomeric mixture;
- d) building of the RGD cyclic sequence and if desired
- e) separation of the stereoisomeric mixture.
- As lower alkyl residue it is normally understood a C1-C4 alkyl, for example, methyl, ethyl, propyl, butyl and all the possible isomers, but also higher alkyls are suitable, provided their compatibility with reaction conditions. As suitable nitrogen protecting groups, the skilled person is able to select, according the general common knowledge, the suitable protecting group, as it will appear from the following examples, but also in the available technical literature and commercial catalogues.
- Also disclosed are pharmaceutical compositions comprising a therapeutically or preventive effective dose of at least a compound of formula (I) in admixture with pharmaceutically acceptable vehicles and/or excipients.
- In its broadest aspect, the present invention advantageously teaches a method for selectively inhibiting αvβ3 integrin-mediated cell attachment to an RGD-containing ligand, comprising contacting said ligand with an effective amount of a compound of formula (I), a method for treating a subject suffering from altered angiogenesis, comprising administering to said subject a compound of formula (I), a method for the treatment of tumors in a subject comprising administering to said subject a compound of formula (I), optionally in combination with other active ingredients, in particular other antitumour agents.
- The present invention shall be described in detail also by means of examples and figures, wherein,
- Best Mode for Carrying out the Invention
- The synthesis of so-called peptido-mimetics molecules has been a very active and productive field of research in drug design (J. Gante, Angew. Chem., Int. Ed. Engl. 1994, 33, 1699.-G. L. Olson, et al.: J. Med. Chem. 1993, 36, 3039.-D. C. Horwell, Bioorg.Med. Chem. Lett. 1993, 3, 797.-A. Giannis et al.: Angew. Chem., Int. Ed. Engl. 1993, 32, 1244.-B. A. Morgan: Annu. Rep. Med. Chem. 1989, 24, 243). The expectation is that these molecules will have the same biological effects as natural peptides, but at the same time, will be metabolically more stable. Of particular interest has been the replacement of reverse-turn dipeptide motifs with constrained molecules that reproduce their conformational features (ibid; M. Kahn, Ed., Peptide Secondary Structure Mimetics. Tetrahedron Symposia-in-Print No. 50 1993, 49, 3433-3689 and references therein). This goal has been frequently achieved using the azaoxobicyclo[X.Y.0]alkane skeleton and/or heteroatom analogues. This has created a demand for efficient synthetic approaches toward such molecules, and many methods have been introduced and recently reviewed (S. Hanessian et al:
Tetrahedron 1997, 38, 12789-12854). One particularly effective and versatile route has been developed by Lubell et al. and employed for the preparation of enantiopure indolizidinone-type 6,5-fused bicyclic lactams (H. -G. Lombartet al.: J. Org. Chem. 1996, 61, 9437-9446.-F. Polyak et al.: J. Org. Chem. 1998, 63, 5937-5949 and references therein for the syntheses of azabicycloalkane amino acids—F. Gosselin et al.: J. Org. Chem. 1998, 63, 7463-7471). Several procedures are also available for the synthesis of 7,5-fused bicyclic lactams, the majority of which require relatively long synthetic sequences. On the contrary, there is not many published protocol that allow the synthesis of 5,5-fused bicyclic lactams. - According to the present invention, the beta-turn portion of the cyclic peptide consists in an azabicycloalkane amino acid scaffold, selected from a 5,5-, 6,5- or 7,5-fused bicyclic lactams. Several 6,5-and 7,5-fused 1-aza-2-oxabicyclo[X.3.0]alkane amino acids have been synthesised, using radical (L. Colombo et al.: Tetrahedron Lett. 1995, 36, 625-628.-L. Colombo et al.: Gazz. Chim. It. 1996, 126, 543-554) or ionic reactions (L. Colombo et al. Tetrahedron 1998, 54, 5325-5336). These structures can be regarded as conformationally restricted substitutes for Ala-Pro and Phe-Pro dipeptide units, and, if their conformations meet certain criteria, they can be used to replace the central (i+1 and i+2) residues of β-turns.
- The present invention provides an improved reaction sequence, amenable to large scale preparation, and allowing the synthesis of different bicyclic lactams from common intermediates, as described in the appended FIG. 1.
- Starting from 5-allyl/formyl prolines13-18, a Z-selective Horner-Emmons olefination followed by double bond reduction has been used to build the second ring. The starting aldehydes have been stereoselectively synthesised by modifications of known procedures (vide infra). Stereorandom double bond reduction can be performed using H2/Pd to yield, after cyclisation, mixtures of easily separable epimers. Stereoselective hydrogenation is studied for the synthesis of 6,5-fused lactams, and achieved with d.e. 80% using Rh-chiral phosphine catalysts. Structural diversity, in terms of ring size and stereochemistry of the azabicycloalkane fragment, is provided by the new strategy, and access to the less common 5,5-fused bicyclic scaffold is also secured.
- Examples of bicyclic dipeptide derivatives 1-12 are shown in FIG. 2.
- Synthesis of the Fused Bicyclic Lactams 1-12
- The synthesis of lactams 1-12 follows the common steps reported in FIG. 1. Starting from the cis or trans 5-alkyl proline aldehydes 13-18, a Horner-Emmons olefination with the potassium enolate of (±)-Z-α-phosphonoglycine trimethyl ester (U. Schmidt, A. Lieberknecht, J. Wild, Synthesis 1984, 53-60) sets up the necessary carbon chain. Following protecting group manipulation (vide infra), reduction of the enamino acrylic acids and treatment with condensing agents gives the lactams of both the “cis” and “trans” series in good yields.
- In all cases where stereoisomeric mixtures of lactams are formed, they can be easily separated by flash chromatography, and their configuration can be assigned with n.O.e. experiments.
- The synthetic scheme is best illustrated by the synthesis of the 6,5-fused “cis”-
lactams cis aldehyde 14 is obtained from the known cis 5-allyl-proline derivative 25 (M. V. Chiesa, L. Manzoni, C. Scolastico, Synlett 1996, 441-443) and reacted with the commercially available phosphonate 26 (U. Schmidt, A. Lieberknecht, J. Wild, Synthesis 1984, 53-60) to give 20 in 98% yield and 7:1 Z:E ratio. - Hydrogenation of20 occurs initially at the enamino Cbz group, and thus results in a complex mixture of products. To circumvent this problem, the substrate is treated with Boc2O to give 27 (98%). Reduction of 27 with H2/Pd(OH)2 followed by reflux in MeOH gives a 1:1 mixture of 8 a and 2 a, which are easily separated by flash-chromatography. From 14 the whole sequence requires only two chromatographic separations (purification of 20 and separation of 8 a from 2 a) and can easily be carried out in multigram scale.
- The stereoselective preparation of the two
epimers enamino acid 28. - Chiral phosphine-Rh catalyst is well-known to represent a powerful and well-established way of access to naturally and non-naturally occurring amino acids and the catalytic asymmetric hydrogenation of dehydropeptides is the logical extension of this methodology to the preparation of biologically active chiral oligo- and polypeptides.
- In asymmetric catalytic hydrogenations using chiral phosphine-Rh catalysts (Z) olefins usually gives the highest stereolsomeric purity of the products, but the most stringent requirement for the substrate remains the presence of an acetamido or an equivalent group on the double bond. (K. E. Koenig in Asymmetric Synthesis, J. D. Morrison Editor,
Vol 5, Academic Press Inc. 1985, 71) The amide-type carbonyl is needed in order to allow two-point co-ordination of the substrate to the metal, which increases the sterical demand as it has been fully elucidated experimentally. (J.Halpern, ibidem, 41) For applications to the synthesis of peptides protecting groups other than the acetamido, like Boc or Cbz should be used, thus permitting differential deprotection. However, very few examples of asymmetric catalytic hydrogenation are known in which these protecting groups are found on the enamino nitrogen: (B. Basu, S. K. Chattopadhyay, A. Ritzen, T. Frejd, Tetrahedron Asymmetry, 1997, 8, 1841) (S. D. Debenham, J. D. Debenham, M. J. Burk, E. J. Toone, J.Am.Chem.Soc. 1997, 119, 9897) more frequently Boc or Cbz protecting groups are present in different position of dehydropeptides being hydrogenated at the N-terminus. (A. Hammadi et al. Tetrahedron Lett. 1998, 39, 2955-I. Ojima, Pure & Appl. Chem. 1984, 56, 99). For the catalytic asymmetric hydrogenation of 28 [Rh(Phosphine)(COD)]CLO4 catalysts is used. The catalysts were prepared by displacing one cyclooctadiene ligand of [Rh(COD)2]CLO4 with the appropriate phosphine. The ligands investigated are (R)-Prophos 29 and (+) or (−)BitianP - The results of asymmetric hydrogenation are reported in the Table 1. The conversion is always quantitative but the highest stereodifferentiation is obtained with [Rh/(−)-BitianP] (entry 3). The results suggest that the newly created stereocentre is mainly determined by the catalyst, which overruns the effect of the stereocentre on the substrates (
entry 2 and 3). The results also indicate that the Boc protecting group on the enamino nitrogen fulfils the requirements and allows the olefin to chelate to the catalyst.TABLE 1 Asymmetric hydrogenation of 28 Entry Catalyst 32/33 d.e. % 1 Rh-29 86/14 72 2 Rh-30 13/87 74 3 Rh-31 90/10 80 - Reactions were carried out at R.T. for 24 h under 10 atm of H2.
- Treatment of
crude lactams - All the remaining lactams1-12 can be synthesised following essentially the same sequence described above. Thus, the 7,5-fused
lactams cis aldehyde 15, easily prepared from the cis 5-allyl proline 25. (M. V. Chiesa, L. Manzoni, C. Scolastico, Synlett 1996, 441-443) Horner-Emmons reaction of 15 with 26 gives a 6:1 Z:E mixture of enamino acrylates. After N-protection they are reduced with H2/Pd-C. The thermic cyclisation ofmethyl ester 34 can be carried out in a suitable solvent, for example xylene. Better results are obtained upon ester hydrolysis followed by EDC/HOBT promoted lactam formation to give 3 a and 9 a, which are easily separable by flash chromatography (51% overall yield from 25). - The starting material for the synthesis of the 5,5-fused “cis” lactams (FIG. 5) is
alcohol 36. Oxidation and Horner-Emmons reaction with 26 followed by N-Boc protection gives 37 as a 5:1 Z:E mixture in 57% yield. Hydrogenation of 37 (H2/Pd(OH)2) results in a complex mixture of products, from which the 1,2diamino ester 38 is anyway isolated in 40% yield. The formation of 38 may result from initial N-debenzylation of 37 followed by intramolecular Michael addition to the enamino ester double bond and hydrogenolysis of the resulting aziridine. The problem can be partly circumvented by performing the hydrogenation starting from theacid 39. Treatment of 39 with H2/Pd-C followed by reflux in MeOH gives an easily separable 1:1 mixture of 1 a and 7 a in 40% yield. - An alternative synthesis of these lactams is also provided starting from the trifluoroacetamido aldehyde13 (FIG. 6).
Aldehyde 13 is synthesised from 36 with a series of 5 high-yielding steps. Horner-Emmons and nitrogen protection gives 40 (46% over 7 steps), which could be directly reduced to give a 1:1 mixture of the fully protected ester 41 (77%). Removal of the trifluoroacetamido protecting group (NaBH4 in MeOH, 84%) followed by treatment in refluxing xylene gives thelactams 1 a and 7 a in 78% yield. - The same synthetic schemes are equally adopted for the synthesis of the “trans” lactam series.
- Starting material for the 6,5-fused “trans”
lactams 5 a and 11 a is the trans-substituted proline 17 (FIG. 7).Aldehyde 17 is best obtained fromester 43, which is made in one step from N-Cbz-5-hydroxy proline tert-Butyl ester as 4:1 trans:cis mixture, following a published procedure. (I. Collado et al., Tetrahedron Lett., 1994, 43, 8037) The Horner-Emmons reaction with the potassium enolate of 26 proceeds with 98% yield. Treatment with Boc2O and cis/trans isomers separation, followed by unselective H2/Pd-C hydrogenation of the crude and treatment in refluxing MeOH gives a 1:1 mixture of easily separated 5 a and 11 a. - Finally, synthesis of the 7,5-fused “trans”
lactams aldehyde 18, which reacted with 26 to give, after nitrogen protection, 46 as a 6:1 Z:E mixture. The usual sequence (NaOH; H2/Pd-C) allowed the isolation of 6 a and 12 a in 40% overall yield. - As far as the synthesis of the cyclic RGD portion, synthetic methods are well known in the art. It is convenient to use the solid phase synthesis approach, although other methods could be used.
- The classical solid-phase synthesis is preferred.
- The solid-phase synthesis is carried out as outlined in C.Gennari et al. Eur.J.Org. Chem. 1999, 379-388.
- The protected amino acid is condensed on a suitable resin, for example a Wang-Merrifield resin. Protecting groups are known in this art. 9-fluorenylmethoxycarbonyl (FMOC) is preferred.
- After having activated the resin, N-FMOC-Gly is attached to the Wang-Merrifield resin by means of a suitable condensing agent, preferably diisopropylcarbodiimide (DIC) /1-hydroxybenzotiazole (HOBt)/4-dimethylaminopyridine (DMAP) (J.Org. Chem, 1996, 61, 6735-6738.
- Subsequently, N-FMOC-Arg(Pmc)OH is attached, followed by the bicyclic N-FMOC-lactam (IIIa) or (IIIb) and finally N-FMOC-Asp (tBu) OH.
- In a still preferred embodiment of the present invention, the solid phase synthesis of cyclic peptides containing the RGD sequence bonded to the bicyclic lactam was performed with 9-flourenylmethoxy carbonyl (Fmoc) strategy. Thus the N-Boc protecting group had to be exchanged by Fmoc group in the bicyclic lactam. The synthesis was performed using Merrifield solid phase peptide synthesis with SASRIN (Super Acid Sensitive Resin) applying Fmoc strategy. Asp was protected at the carboxy group in the side chain as t-butylester and Arg was protected at the guanidino group as Pmc (2,2,5,7,8 PentamethyI chroman-6 sulphonyl). Linear polipeptides were assembled leaving the glycine residue at the C-terminus to prevent racemization and steric hindrance during the cyclization step. The Fmoc group was cleaved with 20% piperidine in DMF. The Fmoc-protected aminoacid and bicyclic lactams were coupled with HOAT (Azahydroxy Benzotriazole) in the presence of DIC (Diisopropylcarbodiimide) or with HOAT/HATU {Azahydroxy Benzotriazole)/{O-(7-Azabenzotriazol-1-yl)-N,N,N′,N′-tetramethyluronioesafluorophosphate} using collidine as base. Peptides were cleaved from SASRIN solid support by 1% TFA in DCM and subsequent neutralisation of TFA with Py. This procedure leads to peptides with intact side chain protective groups. Final cyclization was performed in the same conditions i.e. HOAT/HATU and final deprotection was done with trifluoroacetic acid in the presence of scavengers to avoid side alkylations.
- The compounds of the present invention are endowed with interesting physiological properties, which make them useful as medicaments. In particular, the compounds of formula (I) herein disclosed are selective antagonists of αvβ3 integrins. This antagonist activity provides the use of said compounds for the preparation of medicaments useful in inhibiting the action of αvβ3 integrins. In particular, said medicaments will be used in the treatment of tumors, namely in inhibiting tumor growth and/or angiogenesis or metastasis.
- Receptor Binding Assay
- By way of example, the tests were performed on the preferred compound ST 1646 (see claim9) and for comparison purposes, the highly active compound of the prior art, namely c(RGDfV), i.e. cyclo (Arg-Gly-Asp-D-Phe-Val), in the attached report named as the “KESSLER” peptide, disclosed in WO 9706791was used. Both ST 1646 and “KESSLER” are also named “RGD”.
- Materials and Methods.
- The receptor binding assay was performed as described by Orlando and Cheresh (Arginine-Glycine-Aspartic Acid Binding Leading to Molecular Stabilization between Integrin αvβ3 and Its Ligand. J. Biol. Chem. 266: 19543-19550, 1991). αvβ3 was diluted at 500 ng/ml in coating buffer (20 mM Tris, pH 7.4, 150 mM NaCl, 2 mM CaCl2, 1 mM MgCl2, 1 mM MnCl2) and an aliquot of 100 μl/well was added to a 96-well microtiter plate and incubated overnight at 4° C. The plate was washed once with blocking/binding buffer (50 mM Tris, pH 7.4, 100 mM NaCl, 2 mM CaCl2, 1 mM MgCl2, 1 mM MnCl2, 1% bovine serum albumin), and incubated an additional 2 h at room temperature. The plate was rinsed twice with the same buffer and incubated with radiolabelled ligand at the indicated concentrations. For competition binding, unlabelled competitor and competing peptides were included at the concentration described. After additional three washing, counts were solubilized with boiling 2N NaOH and subjected to y-counting.
- Cell Culture
- Bovine microvascular endothelial cells (BMEC) were maintained in DMEM supplemented with 20% foetal calf serum, 50 units/ml heparin, 50 μg/ml bovine brain extract, 100 units/ml gentamycin.
- BMEC were cultured on 1% gelatine-coated culture flasks and employed in experiments between passage 6-12.
- Human prostate carcinoma cells (PC3) were purchased from American Type Collection Culture (ATCC) and maintained in RPMI supplemented with 10% foetal calf serum, 10 mM L-glutamine, 1% sodium piruvate and 100 units/ml gentamicin.
- Murine lung carcinoma cells (M109) were purchased from American Type Collection Culture (ATCC) and maintained in RPMI supplemented with 10% foetal calf serum, 10 mM L-glutamine and 100 units/ml gentamicin.
- Cells were passaged and used for the experiments before reaching confluence.
- Adhesion Test
- Ninety-six-well plates (Falcon) were coated with either fibronectin or vitronectin (both at 5 g/ml in phosphate buffered saline) overnight at 4° C. Cells were detached using EDTA (1 mM)/trypsine (0,25%) and resuspended in own medium described above. Approximately 40.000 cells/100 1 were applied for each well and allowed to adhere for 60 min at 37° C. in presence of different amounts of RGD peptides. For all experiments the non-adherent cells were removed with PBS and the remaining cells were fixed with 4% paraformaldehyde for 10 min.
- Cells were stained with 1% toluidine blue for 10 min and rinsed with water.
- Stained cells were solubilized with 1% SDS and quantified on a microtiter plate reader at 600 nm.
- Experiments described were performed in quadruplicate and repeated a minimum of three times.
- Results were presented as mean and standard deviation.
- Results
- Binding Assay
- Both purified and membrane-bound integrin αvβ3 bind to the disintegrin echistatin with high affinity, which can be competed efficiently by linear and cyclic RGD peptides (C. C. Kumar, Huiming-nie, C. P. Rogers, M. Malkowski, E. Maxwell, J. J. Catino and L. Armstrong. 1997, The Journal of Pharmacology and Experimental Therapeutics; (283) pp 843-853). Therefore to assess the affinity of these peptides for this integrin we used an experimental protocol of competition with the [125]I-echistatin as described in materials and methods.
- Our results are showing that ST1646 (the compound of claim9) is the more effective peptide to shift echistatin from its interaction with the αvβ3 integrin. Indeed affinity of the RGD peptide ST1646 reported in table 2 as IC50 of the binding concentration was almost 20 time higher than the Kessler cyclic peptides used as reference peptide. Therefore these data are providing clear evidence that the structural constrain of the RGD sequence introduced by the ST 1646 result unexpectedly in an affinity for the αvβ3 integrin notably higher than Kessler peptide.
TABLE 2 Competition binding of RGD to Integrin αvβ3 Receptor RGD IC50 ± SD (nM) Ki ± SD (nM) KESSLER RGD 36.9 ± 6.4 34.06 ± 5.9 ST 1646 2.2 ± 0.32 2.03 ± 0.29 - Effect of RGD compounds on the binding of [125I] Echistatin to αvβ3 integrin.
- IC50, the concentration of compounds required for 50% inhibition of echistatin binding, were estimated graphically by program Allfit. The Ki of the competing ligands were calculated according to the Cheng and Prusoff equation.
- Values are the mean±standard deviation of triplicate determinations.
- Saturation binding isotherms of125I-echistatin binding to αvβ3 receptor were determined in a solid-phase receptor binding assay as described in materials and method. Integrin αvβ3 was coated and incubated with various concentrations (0.05-10 nM) of 125I-echistatin. Non specific binding was evaluated by carrying out the binding assay in the presence of an excess of cold echistatin and was subtracted from the total binding to calculate specific binding.
- In competition binding1251-echistatin was added to the wells to a final concentration of 0.05 nM in binding buffer in the presence of competing ligand. Cold unlabelled echistatin and peptides dissolved in binding buffer at concentrations ranging between 10-4 M to 10−9.
- Endothelial Cells Adhesion Assay
- Since transmembrane αβ integrins family are involved in adhesion of endothelial cells to extracellular matrix proteins we assayed adhesion inhibition of bovine microvascular endothelial cells (BMEC) to both vitronectin and fibronectin when these cells were treated with different concentration of our cyclic RGD.
- According to the binding experiment the cyclic RGD peptide ST1646 was the more effective in inhibiting adhesion than the other peptide tested. Since vitronectin is a more specific ligand of αvβ3 integrin than fibronectin we observed that the RGD tested were able to more efficiently inhibit adhesion of BMEC cells on vitronectin than on fibronectin coated plates (Compare Table 3 with Table 4). Comparing adhesion inhibition, we observed that the cyclic RGD ST1646 was about 10 time more effective than the Kessler peptide inhibiting adhesion of BMEC cells to both fibronectin and vitronectin (see Table 5).
- To asses the ability of ST1646 peptide to compete with vitronectin in adhesion assay also on other cells type, we performed this experiment using microvascular endothelial cells (HMEC), human prostate carcinoma cells (PC3) and murine lung carcinoma cells (M109). Table 6 (a, b and c) show a good activity of the ST1646 peptide in inhibiting adhesion of all cells type. Indeed the reported adhesion inhibition of the ST1646 on HMEC, PC3 and M109 cells have shown higher percentage than the Kessler RGD peptide.
- Putting together these data we have, therefore, showed high activity of the RGD cyclic peptide ST 1646 on several cellular type coherently with binding affinity experiment previously described.
TABLE 3 Adhesion inhibition of BMEC to Vitronectin RGD % inhibition t-test versus control KESSLER 96 P < 0.0001 ST 1646 99 P < 0.0001 - The percentages of adhesion inhibition refer to 100 M concentration of each peptide of and it's calculated by the following formula (control−sample/control×100) where control was RGD untreated sample. Each percentage is the mean of 4 independent samples treated with the same peptide. The t-test has been calculated, using the Mann Witney non parametric test, by the instat program.
TABLE 4 Adhesion inhibition of BMEC to Fibronectin RGD % inhibition t-test versus control KESSLER 30 P < 0.0001 ST 1646 60 P < 0.0001 - The percentages of adhesion inhibition refer to 100 μM concentration of each peptide of and it's calculated by the following formula (control−sample/control×100) where control was RGD untreated sample. Each percentage is the mean of 4 independent samples treated with the same peptide. The t-test has been calculated, using the Mann Witney non parametric test, by the instat program.
TABLE 5 IC50 of adhesion inhibition of BMEC IC50 (μM) RGD Fibronectin Vitronectin KESSLER >100 7.8 ± 1.2 ST 1646 44 ± 4 0.8 ± 0.06 - Several concentrations (in quadruplicate) of the indicate RGD peptides ranging between 100 to 0.6 μM has been tested in adhesion experiment as described in materials and methods. The IC50 which represent the RGD peptide concentration able to inhibit 50% of the adhesion of BMEC to the indicate substrate, has been calculate by the linear regression analysis using the Allfit program. The IC50 for each RGD has been reported together with the standard deviation.
TABLE 6(a) Adhesion assay on Vitronectin HMEC CELLS % IC50 t-test versus RGD Inhibition (μM) control KESSLER 39 4.23 ± 0.31 P < 0.01 ST 1646 58 1.27 ± 0.375 P < 0.0005 - Serial concentrations (in quadruplicate) of indicated RGD peptide over a wide range (0.01-100 μM has been tested in adhesion test, on vitronectin, as described in material and methods.
- The IC50 represents the average value of 3 experiments and indicates that RGD peptide concentration able to inhibit the 50% of cell adhesion.
- The percentages of adhesion inhibition refer to 1.5 μM concentration of each peptide and were calculated by the following formula (control−sample/control×100) where control was RGD untreated sample.
TABLE 6(b) Adhesion assay on Vitronectin PC3 CELLS % IC50 t-test versus RGD Inhibition (μM) control KESSLER 69 2.5 ± 0.2 P < 0.0001 ST 1646 96 0.3 ± 0.08 P < 0.0001 - Serial concentrations (in quadruplicate) of indicated RGD peptide over a wide range (0.01-100 μM has been tested in adhesion test, on vitronectin, as described in material and methods.
- The IC50 represents the average value of 3 experiments and indicates that RGD peptide concentration able to inhibit the 50% of cell adhesion.
- The percentages of adhesion inhibition refer to 1.5 μM concentration of each peptide and were calculated by the following formula (control−sample/control×100) where control was RGD untreated sample.
TABLE 6(c) Adhesion assay on Vitronectin M109 CELLS % IC50 t-test versus RGD Inhibition (μM) control KESSLER 70 0.46 ± 0.5 P < 0.0001 ST 1646 99 0.048 ± 0.06 P < 0.0001 - Serial concentrations (in quadruplicate) of indicated RGD peptide over a wide range (0.01-100 μM has been tested in adhesion test, on vitronectin, as described in material and methods.
- The IC50 represents the average value of 3 experiments and indicates that RGD peptide concentration able to inhibit the 50% of cell adhesion.
- The percentages of adhesion inhibition refer to 1.5 μM concentration of each peptide and were calculated by the following formula (control−sample/control×100) where control was RGD untreated sample.
- The t-test has been calculated using the Mann Witney non parametric test, by the instat program. In the top left side of the two panels it's shown the cell type the adhesion experiment it's referred to.
- Antitumor And Antimetastatic Activity Of St 1646 Vs. Kessler Peptide On M109 Lung Carcinoma-Bearing Balb/C Mice
- Balb/c mice were injected i.m. with M109 lung carcinoma cells (3×105 cells/mouse) into the hind leg muscle. One day after tumor injection, mice were treated with ST 1646 (300 μg/mouse=15 mg/kg) or Kessler peptide (200 μug/mouse=10 mg/kg) according to a qdx9 treatment schedule (every day for 9 administration, i.p. route).
- Tumors were excised at
day 10th after tumor implant. Mice were sacrificed atday 16th from tumor implant and lungs were removed. The number of lung metastases has been evaluated on tumor-excised mice (3 mice/group) using a dissecting microscope. - TVI % (tumor volume inhibition)=100−[(mean tumor weight of treated group/mean tumor weight of control group)×100]. Calculated on
day 16th after tumor implant (just before mice sacrifice) on nonoperated mice. - The results obtained, reported in table 7, shown that ST1646 is more effective than Kessler peptide in reducing both the number of the metastasis and the volume of the tumor.
TABLE 7 Antitumor and antimetastatic activity of ST 1646 vs. Kessler peptide on M109 lung carcinoma-bearing Balb/c mice. Mean no. of Group Schedule metastases TVI % Untreated / 34 / Kessler 200 μg/ mouse qdx9 23 / (10 mg/kg) ST 1646 300 μg/ mouse qdx9 20 3 (15 mg/kg) - Angiogenesis Inhibition On Cam Assay with St1646 Cyclopeptide
- Angiogenesis on CAM (chicken embryo chorioallantoic membrane) assay has been quantified by counting the number of vessels interfacing the implanted gelatin sponge on each embryos and calculating the average for each single experimental point (6-8 eggs for peptide concentration). A single treatment means that the embryo received the peptide, at the concentration indicated in the table, only one times at the beginning of the experiment while in the repeated treatment the peptide has been added to the embryo every day for three days. In some experiments we have refereed our sample to control where angiogenesis occurred spontaneously on the chorioallantoic membrane during embryo development (Table 8). In others experiment (Table 9) instead we have used control where angiogenesis has been stimulated by bFGF (400 ng/embryo).
TABLE 8 Angiogenesis inhibition occurred spontaneously on the chorioallantoic membrane Inhibition Standard Deviation Treatment (%) (%) Control 0 ST1646 −70 ±27 (100 μg single treatment) ST1646 −27 ±8 (20 μg repeated treatment) - Inhibition (%)=[(mean vessels treated group−mean vessels control group)/control group]×100
TABLE 9 Angiogenesis inhibition on the chorioallantoic membrane where angiogenesis has been stimulated by bFGF. Inhibiton Standard Deviation Treatment (%) (%) Control bFGF (400 ng) 0 ST1646 −56 ±18 (100 μg single treatment) ST1646 −84 ±30 (100 μg repeated treatment) - Inhibition (%)=[(mean vessels treated group−mean vessels control group)/control group]×100
- The results obtained provide a clear evidence that the structural constrain of the RGD sequence introduced by the ST 1646 result unexpectedly in an affinity for the αvβ3 integrin notably higher than Kessler peptide. Paralleled to these results in in vitro competition binding assay, ST 1646 assesses its activity in inhibiting the binding of several cell types to fibronectin and vitronectin proteins [table 3-4-5-6(a. b and c)]. According to the binding assay experiments (Table 3), cellular inhibition assay show that ST 1646 is at least 10 folds more active than Kessler peptide. Moreover, ST 1646 is extremely specific in inhibiting cellular binding to vitronectin. This is an additional evidence, in which ST 1646 shows a good selectivity towards cellular αvβ3 integrin implicated in binding to vitronectin substrates. In in vivo experiments the results obtained shown that ST 1646 inhibits the growth of M109 lung metastasis (table 7). In addition, ST 1646 strongly inhibits angiogenesis both in FGF-induced and spontaneous angionenesis (table 8 and 9 respectively). This results show that ST 1646 is a very effective antitumoral and antiangiogenic compound.
- The compounds of the present invention have azabicycloalkane structure and contain the RGD (Arg-Gly-Asp) sequence are selective inhibitors of αvβ3 receptor, and they are useful agents for treating pathologies due to an altered activation of the αvβ3 receptor. It is well known that the activation of αvβ3 receptor is linked to several pathological processes.
- As above mentioned, the experimental results above reported shown that compounds according to the invention are/have: selective inhibitor of αvβ3 receptor; inhibitors of the adhesion of cell lines to fibronectin; antitumoral activity (reduction of the number of the metastasis); antiangiogenetic activity.
- As far as the industrial aspects of the present invention are concerned, the compounds of formula (I) shall be suitably formulated in pharmaceutical compositions. Said compositions will comprise at least one compound of formula (I) in admixture with pharmaceutically acceptable vehicles and/or excipients. According to the therapeutic necessity, the bioavailability of the selected compound, its physico-chemical characteristics, the pharmaceutical compositions according to the present invention will be administered by enteral or parenteral route. Enteral pharmaceutical compositions may be both in the liquid or solid from, for example tablets, capsules, pills, powders, sachets, freeze dried powders to be readily dissolved or in any other way soluble powders, solutions, suspensions, emulsions. Parenteral formulation will be in injectable form, as solutions, suspensions, emulsions or in powdery form to be dissolved immediately before use. Other administration routes are also provided for example intranasal, transdermal or subcutaneous implant. Special pharmaceutical compositions can also be provided. For example controlled release formulations or particular vehicles, for example liposomes.
- The preparation of the pharmaceutical compositions according to the present invention is absolutely within the general knowledge of the person skilled in this art.
- The dosage will be established according to the type of the pathology to be treated, its severity, and the conditions of the patient (weight, age, and sex).
- The following examples further illustrate the invention.
- Examples 1-12 may be read easier by making reference to FIGS.1-8.
- General:1H and 13C NMR spectra were recorded in CDCl3 or C6D6 as indicated, at 200 (or 300) and 50.3 MHz, respectively. The chemical shift values are given in ppm and the coupling constants in to Hz. Optical rotation data were obtained on Perkin-Elmer model 241 polarimeter. Thin-layer chromatography (TLC) is carried out using Merck precoated silica gel F-254 plates. Flash chromatography is carried out with Merck Silica Gel 60, 200-400 mesh. Solvents were dried with standard procedure, and reactions requiring anhydrous conditions were performed under a nitrogen atmosphere. Final product solutions were dried over Na2SO4, filtered and evaporated under reduced pressure on a Buchi rotary evaporator.
- Preparation of Enamides via Horner-Emmons Reaction.
- General Procedure A:
- To a stirred solution of tBuOK (7.36 mmol) in 40 ml of dry CH2Cl2 under nitrogen atmosphere, at −78° C., was added a solution of Z-α-phosphonoglycine trimethyl ester 26 (7.36 mmol) in 5.0 ml of dry CH2Cl2. The solution was stirred for 30 min at this temperature and then a solution of aldehyde (6.13 mmol) in dry CH2Cl2 (25 ml) was added. After 5 hours the solution was neutralised with a phosphate buffer. The aqueous phase was extracted with CH2Cl2, dried over Na2SO4 and the solvent evaporated under reduced pressure. The crude was purified by flash chromatography (hexane/ethyl acetate), affording the enamide in a Z:E diastereoisomeric mixture.
- Preparation of N-Boc-protected Enamide.
- General Procedure B:
- A solution of enamide (11.0 mmol), (Boc)2O (22.0 mmol) and a catalytic quantity of DMAP in 40 ml of dry THF, was stirred for 30 min. under nitrogen. The solution was then quenched with 40 ml of water and extracted with ethyl acetate. The organic phase was dried over Na2SO4 and the solvent evaporated under reduced pressure. The crude was purified by flash chromatography (hexane/ethyl acetate), yielding the Boc-protected enamide.
- Preparation of Alcohol via Hydroboration.
- General Procedure C:
- To a solution of allyl proline (2.34 mmol) in dry THF (4.2 ml) was added a 0.5 M solution of 9-BBN in THF (1.26 mmol). The reaction was stirred for 12 h. and then cooled at 0° C. and, water (0.6 ml), a 3 N solution of NaOH (0.5 ml) and H2O2 30% (0.44 ml) were added. The reaction was stirred for 1 h. at room temperature and then refluxed for other 2 h. The aqueous phase was extracted with AcOEt, the collected organic phases were dried over Na2SO4, filtered and evaporated under reduced pressure, the crude was purified by flash chromatography (hexane/ethyl acetate), yielding the alcohol as yellow oil.
- Preparation of Aldehyde via Swern Oxidation.
- General Procedure D:
- To a stirred solution of oxalyl chloride (16.9 mmol) in 35 ml of CH2Cl2, cooled at −60° C., were added DMSO (23.1 mmol), alcohol (5.66 mmol) dissolved in 21 ml of CH2Cl2, TEA (28.2 mmol). The reaction was warmed at room temperature. After one hour the reaction was washed with 50 ml of water and the aqueous phase was extracted with CH2Cl2. The collected organic layers were dried over Na2SO4. The solvent was evaporated under reduced pressure and the crude purified by flash chromatography (hexane/ethyl acetate), yielding the aldehyde.
- Aldehyde (14):
- A stirred solution of25 (6.0 g, 17.4 mmol) in 84 ml of CH2Cl2 was cooled at −60° C. and bubbled with O3 (flow rate=1/hour). After 1.5 hours the reaction was allowed to warm to room temperature and bubbled with N2 in order to eliminate the excess of O3. The solution was then cooled at 0° C. with an ice bath and Me2S (101.8 mmol, 38 ml) was added. After 5 days of stirring at room temperature the solvent was evaporated under reduced pressure and the crude was purified by flash chromatography (hexane/ethyl acetate, 8:2), yielding 4.53 g of 14 (75%) as yellow oil. −[α]D22=−22.03 (c=1.27, CHCl3). —1H NMR (200 MHz, CDCl3), (signals were splitted for amidic isomerism): δ =1.4-1.5 [2 s, 9 H, C(CH3)3], 1.6-2.4 (m, 4 H, CH2—CH2), 2.4-3.2 (2 m, 2 H, CH2CHO), 4.3-4.5 (m, 2 H, CH2—CH—N, N—CH—COOtBu), 5.15 (s, 2 H, CH2Ph), 7.30 (m, 5 H, aromatic), 9.8 (2 s, 1 H, CHO). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ=200.8, 171.7, 154.0, 136.2, 128.3, 128.0, 127.8, 127.6, 81.4, 67.0, 66.9, 60.8, 60.3, 54.0, 53.2, 49.0, 48.3, 31.0, 30.2, 29.5, 28.9, 28.0, 27.7.−FAB+MS: calcd. for C19H25NO5 347.4, found 348.
- Enamide (20):
- The general procedure A was followed using14 and the crude was purified by flash chromatography (hexane/ethyl acetate, 65:35), affording 20 (98%) in a 7:1 Z:E ratio as colourless oils. Z-isomer: −[α]D22=+38.78 (c=1.26, CHCl3). —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.3-1.5 [2 s, 9 H, C(CH3)3], 1.5-2.3 (m, 4 H, CH2—CH2), 2.4-2.7 (2 m, 2 H, ═CH—CH2), 3.7 (2 s, 3 H, COOCH3), 4,2 (2 m, 2 H, —CH2—CH—N, N—CH—COOtBu), 5.10 (m, 4 H, CH2Ph), 6.15 (m, 1 H, ═CH), 7.30 (m, 10 H, aromatic). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ=172.4, 164.9, 154.5, 136.2, 132.5, 128.3, 128.2, 127.8, 127.7, 127.6, 81.8, 67.2, 66.9, 60.8, 60.3, 57.9, 57.2, 52.1, 33.8, 33.2, 30.7, 29.8, 29.5, 29.0, 28.0, 27.7, 27.6.—FAB+MS: calcd. for C30H36N2O8552.6, found 553.—E-isomer: −[α]D22=−4.08 (c=1.17, CHCl3). —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.25-1.50 [3 s, 9 H, C(CH3)3], 1.5-2.3 (m, 4 H, CH2—CH2), 2.8-3.3 (2 m, 2 H, ═CH—CH2), 3.8 (2 s, 3 H, COOCH3), 4,1 (m, 1 H, —CH2—CH—N), 4.25 (m, 1 H, N—CH—COOtBu), 5.15 (2 s, 4 H, CH2Ph), 6.30 (m, 1 H, ═CH), 7.30 (m, 10 H, aromatic). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ=171.8, 164.4, 154.1, 153.6, 136.4, 135.9, 128.7, 128.4, 128.2, 128.1, 128.0, 127.8, 127.7, 127.6, 126.5, 125.9, 81.2, 80.9, 66.7, 61.0, 60.6, 60.2, 58.8, 58.1, 52.2, 32.7, 32.0, 31.8, 29.9, 29.5, 29.2, 28.8, 27.8, 27.7, 22.5, 14.0.
- Enamide (27):
- The general procedure B was followed using20 and the resulting crude was purified by flash chromatography (hexane/ethyl acetate, 7:3), yielding 27 (98%) as yellow oil. −Z-isomer: −[a]D22=±16.95 (c=1.86, CHCl3). —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.3-1.5 [2 s, 18 H, C(CH3)3], 1.6-2.2 (m, 4 H, CH2—CH2), 2.3-2.8 (2 m, 2 H, ═CH—CH2), 3.7 (s, 3 H, COOCH3), 4,1-4.2 (2 m, 2 H, ═CH—CH2—CH—N, N—CH—COOtBu), 5.15 (m, 4 H, CH2Ph), 6.95 (dd, J=8.5, J=6.4 Hz, 1 H, ═CH), 7.30 (m, 10 H, aromatic). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ=171.4, 163.8, 154.6, 154.3, 152.1, 150.4, 139.0, 138.8, 136.2, 135.1, 129.7, 128.3, 128.2, 128.1, 127.8, 127.6, 83.3, 81.2, 77.1, 68.2, 66.8, 60.9, 60.4, 57.5, 56.7, 52.1, 32.8, 32.1, 29.9, 29.1, 28.8, 27.7.−E-isomer: −[α]D22=+7.34 (c=1.33, CHCl3). —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.3-1.5 [2 s, 18 H, C(CH3)3], 1.6-2.2 (m, 4 H, CH2—CH2), 3.0-3.3 (m, 2 H, ═CH—CH2), 3.75 (2 s, 3 H, COOCH3), 4,1-4.2 (2 m, 2 H, ═CH—CH2—CH—N, N—CH—COOtBu, 5.1-5.2 (m, 4 H, CH2Ph), 6.3 (m, 1 H, ═C), 7.30 (m, 10 H, aromatic). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ=171.6, 163.8, 154.5, 154.3, 152.1, 150.4, 142.8, 142.5, 136.3, 135.2, 128.7, 128.3, 128.2, 128.1, 127.9, 127.8, 127.6, 83.2, 81.1, 68.2, 66.8, 61.1, 60.6, 58.1, 57.4, 51.7, 32.7, 32.0, 29.5, 29.4, 28.9, 28.7, 27.7.
- 6,5-Fused Bicyclic Lactam (2 a, 8 a):
- A solution of 0.320 g of 27 (0.49 mmol) and a catalytic quantity of Pd/
C 10% in 5 ml of MeOH was stirred under H2 for one night. The catalyst was then filtered through celite and the filtration bed was washed with MeOH. The solvent was evaporated under reduced pressure, the residue was dissolved in MeOH and refluxed for 48 h. The solvent was removed and the two diastereoisomers formed were separated by flash chromatography (hexane/ethyl acetate, 7:3), yielding 0.122 g of 8 a and 2 a (70%) in a 1.4:1 diastereoisomeric ratio as white foam. −[α]D22=−10.70 (c=1.29, CHCl3). —1H NMR (200 MHz, CDCl3): δ =1.43-1.45 [2 s, 18 H, C(CH3)3], 1.5-2.5 (m, 8 H, CH2—CH2, BocN—CH—CH2—CH2), 3.69 [m, 1 H, CH—N], 4.1 (m, 1 H, CH—NBoc), 4.38 (dd, J=7.7 Hz, J=1.8 Hz, 1 H, N—CH—COOtBu), 5.59 (d, J=5.4 Hz, 1 H, NH). —13C NMR (50.3 MHz, CDCl3): δ=170.7, 165.8, 155.8, 147.1, 81.4, 79.3, 59.0, 56.2, 49.9, 32.0, 29.5, 29.1, 28.2, 27.8, 27.0, 26.5.−FAB+MS: calcd. for C18H32N2O5 354.46, found 354. −8a −[α]D22=−45.07 (c=1.69, CHCl3). —1H NMR (200 MHz, CDCl3): α =1.44-1.46 [2 s, 18 H, C(CH3)3], 1.55-2.2 (m, 7H, CH2—CH2, BocN—CH—CH—CH2), 2.5 (m, 1H, BocN—CH—CHH), 3.75 [tt, J=11.2 Hz, J=4.2 Hz, 1 H, CH—N], 3.90 (m, 1 H, CH—NBoc), 4.32 (d, J=9.2 Hz, 1 H, N—CH—COOtBu), 5.59 (broad, 1 H, NH). —13C NMR (50.3 MHz, CDCl3): δ =170.6, 167.9, 155.7, 81.2, 79.4, 77.5, 60.4, 59.0, 52.2, 31.4, 28.5, 28.3, 28.2, 27.8, 27.6.−FAB+MS: calcd. for C18H32N2O5 354.46, found 354. - Acid (28):
- To a solution of 27 (0.640 g, 0.980 mmol) in 4.9 ml of MeOH was added 4.9 ml of 1N NaOH (4.9 mmol). After 18 hours of stirring at room temperature the solvent was evaporated under reduced pressure. The solid residue was dissolved in 5 ml of water and 2N HCl was added until
pH 3, then the aqueous solution was extracted with CH2Cl2. The organic phase was dried with Na2SO4, the solvent evaporated under reduced pressure and the crude was purified by flash chromatography (CH2Cl2/MeOH, 95:5), yielding 0.420 g of 28 (85%) as a white solid. - Z isomer: −[α]D22=−57.01 (c=1.99, CHCl3). —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.30-1.50 [2 s, 18 H, C(CH3)3], 1.7-2.7 (m, 6 H, CH2—CH2, ═CH—CH2), 4.2-4.3 (m, 2 H, ═CH—CH2—CH—N, N—CH—COOtBu), 5.1 (m, 2 H, CH2Ph), 6.6 (m, 1 H, ═CH), 7.30 (m, 6 H, aromatic, NHBoc). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =171.5, 168.3, 154.8, 154.5, 140.6, 136.4, 136.1, 133.9, 133.5, 128.3, 128.2, 128.1, 127.8, 127.4, 126.9, 81.3, 80.9, 67.1, 66.9, 65.0, 66.9, 65.0, 57.5, 56.8, 33.4, 32.4, 29.5, 28.5, 28.5, 28.0, 27.8, 27.7, 27.4.
- E isomer: −[a]D22=−41.63 (c=1.87, CHCl3). —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.35-1.50 [3 s, 18 H, C(CH3)3], 1.7-2.4 (m, 4 H, CH2—CH2), 2.7-3.2 (m, 2 H, ═CH—CH2), 4,2-4.3 (m, 2 H, ═CH—CH2—CH—N, N—CH—COOtBu), 5.1 (m, 2 H, CH2Ph), 6.7-6.9 (m, 2 H, ═CH, NHBoc), 7.30 (m, 5 H, aromatic). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =171.7, 167.2, 154.9, 154.5, 154.3, 136.5, 136.2, 128.3, 128.2, 127.7, 127.5, 126.9, 126.3, 126.1, 81.2, 80.4, 66.9, 65.0, 60.7, 60.4, 58.3, 57.7, 32.9, 32.0, 29.5, 28.4, 28.1, 27.8, 27.7, 27.4, 27.1, 14.0.
- Acid (32, 33):
- To the [Rh-(−)-BitianP] catalyst prepared as described in the literature was added28 (0.16 mmol) and MeOH (30 ml), the resulting solution was stirred for 30 min. A 200 ml stainless-steel autoclave equipped with a magnetic stirrer and a thermostatic bath was pressurised with hydrogen and vented three times. The solution was transferred into the autoclave with a syringe and the autoclave was pressurised at 10 KPa with hydrogen. The solution was stirred for 24 h. at 30° C. The hydrogen pressure was released, the solvent evaporated. The crude was submitted to the next reaction without further purification.
- 6,5-fused Bicyclic Lactam (2 a):
- To a solution of32 and 33 as diastereomeric mixture in MeOH (1.5 ml) was added a solution of CH2N2 in Et2O until the TLC showed that the reaction was complete. The solution was evaporated and the crude was dissolved in MeOH (2 ml) and a catalytic quantity of Pd/C was added, the mixture was stirred under H2 for 12 h. The catalyst was then filtered through celite pad and washed with MeOH. The solvent was evaporated under reduced pressure and the crude, as a white foam, was refluxed in MeOH for 48 h. The solvent was evaporated under reduced pressure and the crude was purified by flash chromatography (hexane/ethyl acetate 7:3) affording 2 a (85%) as a white solid.
- 6,5-fused Bicyclic Lactam (8 a):
- This bicyclic lactam was achieved with the same synthetic sequence followed for the
lactam 2 a using for the asymmetric hydrogenation the [Rh-(+)-BitianP] catalyst. - Aldehyde (15):
- The general procedure C was followed using25 and the resulting residue was purified by flash chromatography (hexane/ethyl acetate, 7:3), yielding the alcohol (95%) as yellow oil. —1H NMR (200 MHz, CDCl3) δ =1.4 [s, 9 H, C(CH3)3], 1.6-2.4 (m, 8 s H, CH2—CH2), 3.5-3.8 (2 m, 2 H, CH2OH), 4.1 (m, 1 H, CH2—CH—N), 4.25 (m, 1 H, N—CH—COOtBu), 5.15 (s, 2 H, CH2Ph), 7.30 (m, 5 H, aromatic).
- The general procedure D was followed using the previous alcohol and the resulting crude residue was purified by flash chromatography (hexane/ethyl acetate, 7:3), yielding 15 (89%) as an oil. —1H NMR (200 MHz, CDCl3), (signals were splitted for amidic isomerism): δ =1.4-1.5 [2 s, 9 H, C(CH3)3], 1.6-2.8 (m, 4 H, CH2—CH2), 4.05 (m, 1 H, CH2—CH—N), 4.25 (m, 1 H, N—CH—COOtBu), 5.15 (s, 2 H, CH2Ph), 7.30 (m, 5 H, aromatic), 9.6-9.8 (2 s, 1 H, CHO).
- Aminoester (34):
- The general procedure A was followed using15 and the resulting residue was purified by flash chromatography yielding the enamide (95%) as yellow oil. The compound previously synthesised was submitted to the general procedure B and the resulting residue was purified by flash chromatography yielding the N-Boc protected compound (95%) as white solid. A solution of this compound (0.96 mmol) in MeOH (1 mL) and a catalytic quantity of Pd/C were stirred under hydrogen atmosphere for 12 h. The catalyst was then filtered through a celite pad. The solvent was evaporated under reduced pressure yielding 0.320 g of 34 (83%) as a white solid (mixture of two diastereoisomers). —1H NMR (200 MHz, CDCl3): δ =1.47, 1.48 [2 s, 18 H, C(CH3)3], 1.40-2.1 (m, 10 H, CH2—CH2, BocN—CH—CHH—CH2), 3.00 (m, 1 H, CH—N), 3.6 (m, 1 H, N—CH—COOtBu), 4.3 (m, 1 H, CH—NBoc), 5.0(db, 1H, NH).
- Amino Acid (35):
- To a solution of 34 (0.288 g, 0.720 mmol) in MeOH was added 1N NaOH, after 1.5 h. the solution was acidified until
pH 3 with IN HCl, then the solution was evaporated. The crude was submitted to the next reaction without further purification. - 7,5-fused Bicyclic Lactams (3 a, 9 a):
- To a solution of the crude 35 (0.720 mmol) in CH2Cl2 (80 ml) was added in the order: Et3N (0.720 mmol, 0.220 ml), HOBt (0.166 g, 1.22 mmol) and a catalytic quantity of DMAP. After 15 min was added EDC (0.180 g, 0.937 mmol) and the solution was stirred for 24 h. To the solution was added H2O (40 ml), the aqueous phase was extracted with CH2Cl2 and the collected organic layers were dried with Na2SO4 filtered and evaporated under reduced pressure affording 0.191 g of 3 a and 9 a in a 1:1 diastereoisomeric ratio and 72% of yield over 2 steps.
- (3a). —1H NMR (200 MHz, CDCl3): δ =1.41, 1.42 [2 s, 18 H, C(CH3)3], 1.5-2.5 (m, 10 H, CH2—CH2), 3.80 (m, 1 H, CH—N), 4.2 (m, 1 H, CH—NBoc), 4.51 (dd, J=4.8 Hz, 1 H, N—CH—COOtBu), 5.54 (db, 1 H, NH). -(9a). —1H NMR (200 MHz, CDCl3): δ =1.42, 1.43 [2 s, 18 H, C(CH3)3], 1.50-2.2 (m, 10H, CH2—CH2), 3.8 [m, 1 H, CH—N], 4.25 (dd, J=4.6 Hz, J=9.6 Hz, 1 H, CH—NBoc), 4.42 (dd, J=2.3 Hz, J 7.2 Hz, 1 H, N—CH—COOtBu), 5.30 (bs, 1 H, NH).
- Enamide (37): The general procedure D was followed using 36 and the crude was purified by flash chromatography (hexane/ethyl acetate, 7:3), yielding the aldehyde (81%) as an oil. —1H NMR (200 MHz, CDCl3), (signals were splitted for amidic isomerism): δ =1.48 [s, 9 H, C(CH3)3], 1.8-2.2 (m, 4 H, CH2—CH2), 3.21 (m, 1 H, CH2—CH—N), 3.45 (m, 1 H, N—CH—COOtBu), 3.70 (d, J=12 Hz, 1 H, HCHPh), 4.10 (d, J=12 Hz, 1 H, HCHPh), 7.30 (m, 5 H, aromatic), 9.12 (d, 1 H, CHO).
- The general procedure A was followed using the previous aldehyde and the crude was purified by flash chromatography (hexane/ethyl acetate, 65:35), affording the enamide (98%) in a 9:1 Z:E ratio as colourless oils. Z-isomer —1H NMR (200 MHz, CDCl3) δ =1.31 [s, 9 H, C(CH3)3], 1.7-2.2 (m, 4 H, CH2—CH2), 3.3 (m, 1 H, N—CH—COOtBu) 3.5 (s, 1 H, CH2—CH—N), 3.66 (d, J=13.2 Hz, HCHPh) 3.73 (s, 1 H, COOCH3), 3.79 (d 1 H, HCEPh), 5.11 (d, J=12.5 Hz, 1 H, OHCHPh), 5.15 (d, J=12.5 Hz, 1 H, OHCHPh), 6.07 (d, J=7.4 Hz, 1 H, ═CH), 7.10-7.6 (m, 10 H, aromatic), 8.15 (sb, 1 H, —NH). —13C NMR (50.3 MHz, CDCl3): δ =173.7, 165.1, 154.1, 137.4, 136.1, 129.5, 128.5, 128.3, 128.0, 127.8, 127.7, 127.1, 80.5, 66.9, 65.3, 62.3, 57.5, 52.0, 30.1, 28.9, 27.7.
- The general procedure B was followed using the enamide previous synthesised. The crude was purified by flash chromatography (hexane/ethyl acetate, 7:3) yielding37 (98%) as a white solid. —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.3-1.5 [2 s, 18 H, C(CH3)3], 1.6-2.2 (m, 4 H, CH2—CH2), 3.1 (m, 1 H, N—CH—COOtBu), 3.5 (m, 1 H, CH2—CH—N), 3.7 (s, 1 H, COOCH3), 3.7 (d, J=12 Hz, 1 H, HCHPh), 3.9 (d, J=12 Hz, 1 H, HCHPh), 5.20 (d, J=12 Hz, 1 H, HCHPh), 7.0 (d, J=8.6 Hz, 1 H, ═CH), 7.1-7.4 (m, 10 H, aromatic).
- Amino acid (39): To a solution of 37 (0.424 g, 0.713 mmol) in MeOH (4 ml) was added IN NaOH (4 mmol, 4 ml) and stirred for 1.5 h. The solution was acidified until
pH 3 with 1N HCl, then the solution was evaporated. The crude was submitted to the next reaction without further purification. —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.35, 1.5 [2 s, 18 H, C(CH3)3], 1.7-2.3 (m, 4 H, CH2—CH2), 3.3 (m, 1 H, N—CH—COOtBu), 3.65 (m, 1 H, CH2—CH—N), 3.7 (d, J=12.8 Hz, 1 H, HCHPh), 3.9 (d, J=12.8 Hz, 1 H, HCHPh), 6.5 (d, J=7.6 Hz, 1 H, ═CH, 7.1-7.4 (m, 10 H, aromatic), 9.00 (bs, 1 H, —COOH). - 5,5-fused Bicyclic Lactams (1 a, 7 a):
- A solution of39 (0.713 mmol) and a catalytic quantity of Pd(OH)2/
C 20% in 1 ml of MeOH (7 ml) was stirred under hydrogen atmosphere for 12 h. The catalyst was then filtered through a celite pad and the solvent was evaporated under reduced procedure. The crude was dissolved in MeOH and refluxed for 48 h. The solvent was evaporated under reduced pressure and the crude was purified by flash chromatography (hexane/ethyl acetate 6:4) affording 0,097 g of 1 a and 7 a as a white solid in 40% of yield (over 2 steps) and 1:1 diastereomeric ratio. 1 a: −[α]D22=−4.80 (c=1.20, CHCl3). —1H NMR (200 MHz, CDCl3): δ =1.50, 1.51 [2 s, 18 H, C(CH3)3], 1.6-2.4 (m, 5 H, CH2—CH2, BocN—CH—CHH), 2.95 (m, 1 H, BocN—CH—CHH), 3.85 [m, 1 H, (CH—N], 4.15 (d, J=8.8 Hz, 1 H, N—CH—COOtBu), 4.60 (m 1 H, CH—NBoc), 5.25 (broad, 1 H, NH). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =171.7, 169.7, 155.6, 81.8, 79.5, 58.8, 56.5, 56.0, 55.8, 39.5, 33.4, 29.5, 28.2, 27.8.−FAB+MS: calcd. for C17H28N2O5 340.41, found 341. −2a: [α]D22=−4.80 (c=1.20, CHCl3). —1H NMR (200 MHz, CDCl3): δ =1.45 [2 s, 18 H, C(CH3)3], 1.5-2.5 (m, 6 H, CH2—CH2, BocN—CH—CH2), 4.05 (d, J=8.8 Hz, 1 H, N—CH—COOtBu), 4.12 (m, 1 H, CH—N), 4.25 (m, 1 H, CH—NBoc), 5.05 (broad, 1 H, NH). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =170.9, 169.8, 155.2, 82.2, 81.8, 79.9, 77.1, 61.2, 58.8, 57.6, 56.0, 55.8, 20 34.4, 33.8, 33.4, 29.9, 29.5, 29.2, 28.5, 28.1, 27.7.−FAB+MS: calcd. for C17H28N2O5 340.41, found 341. - Aldehyde (13):
- To a stirred solution of36 (1.5 g, 5.14 mmol) in 39 ml of dry CH2Cl2 under nitrogen were added in the order: TBDMSC1 (0.931 g, 6.17 mmol), TEA (6.17 mmol, 0.94 ml) and DMAP (0.063 g, 0.51 mmol). After 12 h. the solvent was evaporated under reduced pressure and the crude purified by flash chromatography (hexane/ethyl acetate, 9:1), yielding 1.910 g of compound (94%) as a colourless oil. −[α]D 22=−3.61 (c=2.52, CHCl3). —1H NMR (200 MHz, CDCl3): δ =−0.5 [s, 6 H,CH3Si], 0.85 [s, 9 H, (CH3)3C—Si], 1.4 [s, 9 H, C(CH3)3], 1.5-2.1 (m, 4 H, CH2—CH2), 2.9 (m, 1 H, SiO—CH2—CH—N), 3.3-3.4 (m, 3 H, N—CH—COOtBu, SiO—CH2), 3.9 (s, 2 H, CH2Ph), 7.3 (m, 5 H, aromatic). —13C NMR (50.3 MHz, CDCl3): δ =173.6, 139.3, 129.1, 127.9, 126.7, 19.9, 67.5, 66.8, 65.8, 58.8, 28.4, 28.0, 27.8, 25.8, 18.1,-3.6.
- A solution of the silyl protected alcohol (1.850 g, 4.55 mmol) and Pd(OH)2/
C 20% (0.250 g, 0.45 mmol) in 45 ml of MeOH was stirred under hydrogen atmosphere for 4 hours. Then the catalyst was filtered through celite pad and washed with MeOH, the solvent was evaporated under reduced pressure, yielding 1.34 g of hydrogenated compound (94%) as colourless oil. −[α]D22=−5.80 (c=1.99, CHCl3). —1H NMR (200 MHz, CDCl3): δ =0.4 (s, 6 H,CH3Si), 0.92 [s, 9 H, (CH3)3C—Si], 1.49 [s, 9 H, C(CH3)3], 1.5-2.1 (m, 4 H, CH2—CH2), 2.35 (broad, 1 H, NH), 3.2 (m, 1 H, SiO—CH2—CH—N), 3.65 (m, 3 H, N—CH—COOtBu, SiO—CH2). - To a stirred solution of the previous compound (1.2 g, 3.79 mmol) in 38 ml of CH2Cl2 were added pyridine (11.39 mmol, 0.92 ml) and (CF3CO)2O (8.35 mmol, 1.16 ml). After 1.5 hours the solvent was evaporated under reduced pressure and the crude purified by flash chromatography (hexane/ethyl acetate, 9:1), yielding 1.4 g of the N-protected pyrrolidine (89%) as colourless oil. −[α]D22=−8.62 (c=2.11, CHCl3). —1H NMR (200 MHz, CDCl3): δ =0.4 (s, 6 H,CH3Si), 0.9 [s, 9 H, (CH3)3C—Si], 1.47 [s, 9 H, C(CH3)3], 1.7-2.4 (m, 4 H, CH2—CH2), 3.5 (m, 1 H, SiO—CHH), 3.75 (dd, J=10.6 Hz, J=4.2 Hz, 1 H, SiO—CHH), 4.2 (m, 1 H, SiO—CH2—CH—N), 4.35 (t, J=8.5 Hz 1 H, N—CH—COOtBu).
- To a stirred solution of N-protected pyrrolidine (1.2 g, 2.91 mmol) in 29 ml of THF, cooled at −40° C., was added a 1M solution of TBAF in THF (3.20 mmol, 3.2 ml). Then the solution was allowed to warm at room temp. After 2.5 hours was added 30 ml of brine and the resulting mixture was extracted with ethyl acetate. The organic phase was dried with Na2SO4 and the solvent evaporated under reduced pressure. The crude was purified by flash chromatography (hexane/ethyl acetate, 6:4), yielding 0.850 g of O-deprotected compound (98%) as colourless oil. −[α]D22=−6.40 (c=1.45, CHCl3). —1H NMR (200 MHz, CDCl3): δ =1.5 [s, 9 H, C(CH3)3], 2.0-2.4 (m, 4 H, CH2—CH2), 3.4-3.7 (m, 2 H, HO—CH2), 4.2-4.6 (m, 3 H, N—CH—COOtBu, HO—CH2—CH—N).
- The general procedure D was followed using the alcohol and the residue was purified by flash chromatography (hexane/ethyl acetate, 6:4), yielding the aldehyde (93%) as white solid. −[α]D22=+22.48 (c=1.53, CHCl3). —1H NMR (200 MHz, CDCl3): δ =1.5 [s, 9 H, C(CH3)3], 1.8-2.5 (m, 4 H, CH2—CH2), 4.5-4.7 (m, 2 H, CHO—CH—N, N—CH—COOtBu), 9.7 (s, 1 H, CHO).
- Enamide (40):
- The general procedure A was followed using13 and the crude residue was purified by flash chromatography affording the enamide (68%) as colourless oil (diastereoisomeric ratio Z:E=1:1). —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism and were referred to the mixture of two diastereoisomers): δ =1.5 [s, 9 H, C(CH3)3], 1.6-2.45 (m, 4 H, CH2—CH2), 3.75 (s, 3 H, COOCH3), 4.6 (m, 1 H, N—CH—COOtBu), 4.8 (dd, J=18 Hz, J=10 Hz, 1 H, ═CH—CH—N), 5.12 (s, 2 H, CH2Ph), 6.3, 6.8 (2d, J=10 Hz, 1 H, ═CH of Z-isomer, E-isomer), 7.35 (m, 5 H, aromatic).
- The general procedure B was followed using the enamide and the crude was purified by flash chromatography affording 40 with a 95% of yield as colourless oil. —1H NMR (200 MHz, C6D6) (signals were splitted for amidic isomerism and were referred to the mixture of two diastereoisomers): δ =1.3, 1.5 [2 s, 18 H, C(CH3)3], 1.6-2.35 (m, 4 H, CH2—CH2), 3.7 (s, 3 H, COOCH3), 4.6-4.8 (m, 2 H, N—CH—COOtBu, ═CH—CH—N), 5.25 (m, 2 H, CH2Ph), 7.0 (m, 1 H, ═CH), 7.35 (m, 5 H, aromatic). —13C NMR (50.3 MHz, C6D6) (signals were splitted for amidic isomerism and were referred to the mixture of two diastereoisomers): δ =169.1, 163.9, 141.2, 136.1, 129.9, 128.4, 128.2, 127.4, 119.4, 113.7, 83.6, 82.5, 82.0, 68.8, 68.5, 68.2, 62.5, 60.9, 60.8, 58.5, 57.6, 56.8, 53.2, 51.9, 51.7, 51.6, 33.7, 31.8, 30.2, 27.7, 27.5, 26.9.
- Aminoester (41)
- A Z/E mixture of 40 (0.609 g, 1.01 mmol) and Pd(OH)2/
C 20% (0.054 g) in 10 ml of MeOH was stirred under hydrogen atmosphere for 18 h. The catalyst was filtered through a celite pad and washed with MeOH. The solvent was evaporated under reduced pressure and the crude purified by flash chromatography (toluene/Et2O, 85:15), yielding 0.365 g of 40 (77%) as yellow oil. —1H NMR (200 to MHz, CDCl3) (signals were splitted for amidic isomerism and were referred to the mixture of two diastereoisomers): δ =1.45 [s, 18 H, C(CH3)3], 1.6-2.7 (m, 6 H, CH2—CH2, BocN—CH—CH2), 3.75 (2 s, 3 H, COOCH3), 4.25-4.4 (2 m, 2 H, BocN—CH, BocN—CH—CH2—CH), 4.55 (m, 1 H, N—CH—COOtBu), 5.30 (d, J=8.5 Hz, 1 H, NH). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism and were referred to the mixture of two diastereoisomers): δ =172.4, 170.0, 155.8, 128.9, 128.0, 82.7, 82.0, 79.7, 61.4, 60.6, 58.0, 56.5, 52.2, 51.5, 37.7, 36.4, 35.5, 30.2, 29.7, 29.0, 28.4, 28.1, 27.6, 25.5. −FAB+MS: calcd. for C20H31F3N2O7 468.47, found 468. - Amino acid (42)
- A solution of 41 (0.184 g, 0.393 mmol) and NaBH4 (0.0298 g, 0.781 mmol) in 8 ml of MeOH was stirred for 1 hour at room temperature. The solution was concentrated and 10 ml of water was added. The aqueous solution was extracted with ethyl acetate, the collected organic phases were dried on Na2SO4 and the solvent evaporated under reduced pressure. The two diastereoisomers formed in the previous reactions were separated at this step by flash chromatography (ethyl acetate/hexane, 6:4), achieving 0.123 g of 42 (R) and 42 (S) (84%) in a 2.6:1 diastereoisomeric ratio as colourless oil. −42 (R): —1H NMR (200 MHz, C6D6) (signals were splitted for amidic isomerism): δ =1.30, 1.45 [2 s, 18 H, C(CH3)3], 1.5-1.9 (m, 6 H, CH2—CH2, BocN—CH—CH2), 2.85 (m, 1 H, BocN—CH—CH2—CH), 3.2-3.4 (m, 4 H, COOCH3, N—CH—COOtBu), 4.65 (m, 1 H, BocN—CH), 6.6 (broad, 1 H, NHBoc). —13C NMR (50.3 MHz, C6D6) (signals were splitted for amidic isomerism): δ =174.1, 173.2, 155.8, 81.4, 81.3, 79.5, 60.6, 60.4, 56.5, 56.3, 52.5, 52.0, 37.7, 31.9, 30.0, 29.8, 28.2, 28.0, 27.9.−FAB+MS: calcd. for C18H32N2O6 372.46, found 373. −42 (S): —1H NMR (200 MHz, C6D6) (signals were splitted for amidic isomerism): δ =1.30, 1.50 [2 s, 18 H, C(CH3)3], 1.50-1.80 (m, 6 H, CH2—CH2, BocN—CH—CH2), 2.8 (m, 1 H, BocN—CH—CH2—CH), 3.3 (s, 3 H, COOCH3), 3.4 (dd, J=9.1 Hz, J=5.9 Hz, 1 H, N—CH—COOtBu), 4.45 (m, 1 H, BocN—CH), 5.3 (broad, 1 H, NHBoc). —13C NMR (50.3 MHz, C6D6) (signals were splitted for amidic isomerism): δ=171.7, 171.5, 164.2, 164.0, 154.7, 154.3, 153.5, 136.6, 136.4, 135.8, 128.4, 128.3, 128.2, 128.1, 127.7, 126.2, 125.9, 125.8, 81.0, 87.1, 66.8, 66.6, 60.8, 60.4, 58.2, 57.5, 52.3, 52.2, 32.8, 31.9, 28.5, 28.1, 27.8, 27.7, 27.4, 27.1.−FAB+MS: calcd. for C18H32N2O6 372.46, found 373.
- 5,5-Fused Bicyclic Lactam [1 a]:
- A stirred solution of 42 (S) (0.028 g, 0.075 mmol) in 1.5 ml of p-xylene was warmed at 130° C. for 24 hours. The solvent was then evaporated under reduced pressure and the crude purified by flash chromatography (hexane/ethyl acetate, 7:3), yielding 19 mg of1 a (74%) as a white foam. −αD 22=−4.80 (c=1.20, CHCl3). —1H NMR (200 MHz, CDCl3): δ =1.50, 1.51 [2 s, 18 H, C(CH3)3], 1.6-2.4 (m, 5 H, CH2—CH2, BocN—CH—CHH), 2.95 (m, 1 H, BocN—CH—CHH), 3.85 [m, 1 H, (CH—N], 4.15 (d, J=8.8 Hz, 1 H, N—CH—COOtBu), 4.60 (m 1 H, CH—NBoc), 5.25 (broad, 1 H, NH). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =171.7, 169.7, 155.6, 81.8, 79.5, 58.8, 56.5, 56.0, 55.8, 39.5, 33.4, 29.5, 28.2, 27.8. −FAB+MS: calcd. for C17H28N2O5 340.41, found 341.
- 5,5-Fused bicyclic lactam [7 a]:
- The compound [7 a] was achieved from compound 42 (R), by using the same procedure described for the synthesis of compound 1 a, with a 65% of yield as white foam. −[α]D22=−4.80 (c=1.20, CHCl3). —1H NMR (200 MHz, CDCl3): δ =1.45 [2 s, 18 H, C(CH3)3], 1.5-2.5 (m, 6 H, CH2—CH2, BocN—CH—CH2), 4.05 (d, J=8.8 Hz, 1 H, N—CH—COOtBu), 4.12 (m, 1 H, CH—N), 4.25 (m, 1 H, CH—NBoc), 5.05 (broad, 1 H, NH). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =170.9, 169.8, 155.2, 82.2, 81.8, 79.9, 77.1, 61.2, 58.8, 57.6, 56.0, 55.8, 34.4, 33.8, 33.4, 29.9, 29.5, 29.2, 28.5, 28.1, 27.7.−FAB+MS: calcd. for C17H28N2O5 340.41, found 341.
- Ester (43)
- To a stirred suspension of KH (0.777 g, 19.4 mmol) in anhydrous DMF (80 ml) the triethyl phosphonoacetate (19.4 mmol, 3.9 ml) was added. The mixture was stirred at room temperature for 1 h and then a solution of hemiaminal (5.2 g, 16.2 mmol) in DMF (80 ml) was added. The reaction was stirred overnight at room temperature, quenched with satured aqueous NH4Cl solution and extracted with AcOEt. The combined organic extract were dried over Na2SO4 and the solvent was evaporated to dryness and purified by flash chromatography yielding 4.8 g of 43 (75%) in a 4:1 trans:cis diastereoisomeric ratio. —1H NMR (200 MHz, CDCl3) (signals are splitted for amidic isomerism): δ =1.2-1.35 (m, 3 H, CH3CH2O), 1.35, 1.40, 1.45, 1.50 [4 s, 9 H, C(CH3)3], 1.60-2.60 (m, 5 H, CH2—CH2, CHCO2Et), 2.70-3.1 (2 dd, J1=4 Hz, J2=15 Hz, 1 H, CHCO2Et, trans isomer), 3.2-3.5 (2 dd, J1=4 Hz, J2=15 Hz, 1 H, CHCO2Et, cis isomer), 4.13 (dq, J1 =J 2=7 Hz , 2 H, CH3CH2O) 4.27 (m, 1 H, CHCO2tBu), 4.45 (m, 1 H, CH2—CH—N), 5.15-5.35 (m, 2 H, CH2Ph), 7.3-7.4 (m, 5 H, aromatic). —13C NMR (50.3 MHz, CDCl3) (signals are splitted for amidic isomerism): 5=171.4, 171.3, 171.1, 171.0, 154.4, 154.1, 153.8, 136.5, 136.3, 128.3, 128.2, 127.7, 127.6, 81.2, 66.9, 66.8, 60.8, 60.5, 60.3, 60.2, 55.5, 55.2, 54.5, 39.1, 38.0, 30.4, 29.7, 28.9, 28.7, 28.2, 28.0, 27.8, 27.7, 27.1, 14.1.−FAB+MS: calcd. for C21H29NO6 391.2, found 392.
- Aldehyde (14, 17):
- To a stirred solution of43 (1.205 g, 3.08 mmol) in dry diethylether (31 mL) at −10° C., LiBH4 2M in THF (1.5 mL, 3.08 mmol) was added. After 24 h a saturated solution of NaHCO3 (40 ml) was added and the resulting mixture was extracted with AcOEt. The organic phase was dried over Na2SO4 and evaporated to dryness. The crude product was purified by flash chromatography (hexane/ethyl acetate 1:1), yielding 1.01 g of alcohol (94%) as a yellow oil. -Trans-isomer: [α]D22=−32.3 (c=1.02, CHCl3). −1H NMR (200 MHz, CDCl3): δ =1.35 [s, 9 H, C(CH3)3], 1.5-2.4 (m, 6 H, CH2—CH2, CH2—CH2—O), 3.5-3.7 (m, 2 H, CH2OH), 3.82 (bs, 1 H, OH), 4.22 (dd, J=7.5, J˜0, 1 H, CHCO2tBu), 4.38 (m, 1 H, CH2—CH—N), 5.15 (m, 2 H, CH2Ph), 7.32 (s, 5 H, aromatic). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =171.4, 156.1, 136.0, 128.4, 128.3, 127.9, 127.8, 127.7, 81.2, 81.1, 67.2, 67.0, 60.4, 59.9, 59.0, 55.2, 55.1, 38.6, 37.7, 28.9, 28.7, 27.8, 27.7.-Cis-isomer: [α]D22=−54.0 (c=1.51, CHCl3). —1H NMR (200 MHz, CDCl3): δ =1.33 [s, 9 H, C(CH3)3], 1.4-1.24 (m, 6 H, CH2—CH2, CH2—CH2—O), 3.6-3.9 (m, 2 H, CH2OH), 4.08 (dd, J=9.5, J=4, 1 H, OH), 4.25 (dd, J=J 8.5, 1 H, CHCO2tBu), 4.40 (m, 1 H, CH2—CH—N), 5.15 (m, 2 H, CH2Ph), 7.35 (s, 5 H, aromatic). —13C NMR (50.3 MHz, CDCl3): δ =27.7, 28.9, 30.4, 37.4, 55.4, 58.8, 60.5, 67.4, 81.3, 127.7, 127.9, 128.3, 136.1, 155.9, 171.8.
- A solution of the alcohol (0.304 g, 0.87 mmol) in dry CH2Cl2 (2.5 mL) was added to a suspension of Dess-Martin periodinane (0.408 g, 1.13 mmol) in dry CH2Cl2 (2.5 mL) at room temperature. After 1 h Et2O and NaOH 1N were added till clear solution. The aqueous phase was extracted twice with Et2O; the collected organic layers were washed with H2O, dried with Na2SO4, and evaporated to dryness. The crude product was purified by flash chromatography (hexane/ethyl acetate 7:3) affording 0.277 g of 17 (92%). —Trans-isomer: [α]D22=−48.65 (c=1.01, CHCl3). —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.35-1.45 [2 s, 9 H, C(CH3)3], 1.6-2.6 (m, 4 H, CH2—CH2), 2.8-3.1 (2 m, 2 H, CH2CHO), 4.3 (m, 1 H, CHO—CH2—CH—N), 4.6 (m, 1 H, N—CH—COOR), 5.15 (m, 2 H, CH2Ph), 7.30 (m, 5 H, aromatic), 9.1, 9.3 (2 m, 1H, CHO). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =200.3, 171.4, 154.1, 136.2, 128.4, 128.2 128.0, 127.8, 127.7, 81.3, 67.1, 66.9, 60.5, 60.1, 53.4, 52.5, 49.0, 48.4, 29.5, 28.6, 28.3, 27.8, 27.7, 27.3.
- N-Boc-protected enamide (44): The mixture of
aldehydes - Trans-E-isomer: [α]D 22=−50.16 (c=1.48, CHCl3). —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.35-1.45 [2 s, 9 H, C(CH3)3] 1.6-2.4 (m, 4 H, CH2—CH2), 2.7-3.1 (2 m, 2 H, ═CH—CH2), 3.8 (2 s, 3 H, COOCH3), 4,1-4.3 (2 m, 2 H, —CH2—CH—N e N—CH—COOtBu), 5.10 (m, 4 H, CH2Ph), 6.50 (m, 1 H, ═CH), 7.25 (m, 10 H, aromatic). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =171.7, 171.5, 164.2, 164.0, 154.7, 154.3, 153.5, 136.6, 136.4, 135.8, 128.4, 128.3, 128.2, 128.1, 127.7, 126.2, 125.9, 125.8, 81.0, 87.1, 66.8, 66.6, 60.8, 60.4, 58.2, 57.3, 52.2, 32.8, 31.9, 28.5, 28.1, 27.8, 27.7, 27.4, 27.1.
- The mixture of enamides (0.394 g, 0.71 mmol) was reacted following the general procedure B. Flash chromatography of the crude product (hexane/ethyl acetate 75:25) afforded 0.287 g (73%) of pure trans-isomer 23.—Z-isomer: [α]D 22=−50.98 (c=1.56, CHCl3). —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.3-1.5 [4 s, 18 H, C(CH3)3], 1.7-2.6 (m, 6 H, CH2—CH2 and ═CH—CH2), 3.7 (s, 3 H, COOCH3), 4,1-4.3 (m, 2 H, —CH2—CH—N and N—CH—COOtBu), 5.15 (m, 4 H, CH2Ph), 6.8 (m, 1 H, ═CH), 7.30 (m 10 H, aromatic). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =171.4, 163.9, 154.6, 154.5, 150.0, 146.2, 138.5, 138.0, 136.2, 129.9, 128.3, 128.2, 128.1, 127.8, 83.4, 81.2, 68.3, 67.0, 66.8, 60.6, 60.2, 56.9, 56.2, 52.2, 32.9, 32.0, 28.3, 27.8, 27.7, 27.3.−FAB+MS: calcd. for C35H44N2O10 652.7, found 652. —
- E-isomer:1H NMR (200 MHz, CDCl3): δ =1.3-1.4 [2 s, 18 H, C(CH3)3], 1.5-2.3 (m, 4 H, CH2—CH2), 3.0 (2 m, 2 H, ═CH—CH2), 3.65 (2 s, 3 H, COOCH3), 4,2 (m, 2 H, —CH2—CH—N and N—CH—COOtBu), S.FS(m, 4 H, CH2Ph), 6.1 (2 t, J=8.5 Hz, 1 H, ═CH), 7.30 (m, 10 H, aromatic). —13C NMR (50.3 MHz, CDCl3): δ 171.5, 163.7, 154.6, 154.3, 152.2, 150.4, 142.7, 142.2, 136.3, 135.1, 128.9, 128.3, 128.2, 128.0, 127.8, 127.7, 83.4, 83.3, 81.1, 77.1, 68.3, 66.9, 66.7, 60.7, 60.3, 57.6, 56.8, 51.7, 32.9, 32.0, 28.4, 28.0, 27.7, 27.3, 27.0.
- 6,5 fused bicyclic lactams (5 a, 11 a):
- A solution of44 (0.489 g, 0.75 mmol) and Pd(OH)2/
C 20% (catalytic) in MeOH (7.5 mL) was stirred under H2 for one night. The catalyst was filtered off and the mixture was refluxed for 24 h. The solvent was then removed and the two diastereoisomeric products were separated by flash chromatography (hexane/ethyl acetate 6:4), yielding 0.186 g of 5 a and 11 a (70%) in a 1.4:1 diastereoisomeric ratio. —5a: 1H NMR (200 MHz, CDCl3): δ =1.45-1.50 [2 s, 18 H, C(CH3)3], 1.55-2.60 (m, 8 H, CH2—CH2 and BocN—CH—CH2—CH2), 3.68 [tt, J=14.9 Hz and 4.2 Hz, 1 H, (R)2CH—N], 4.05 (m, 1 H, CH—NBoc), 4.35 (t, J=8.5 Hz, 1H, N—CH—COOtBu), 5.28 (broad, 1 H, NH). −FAB+MS: calcd. for C18H32N2O5 354.46, found 354. — -
- Aldehyde (18):
- The general procedure C was followed using43 and the crude residue was purified by flash chromatography affording the alcohol with a yield of 98%. —1H NMR (200 MHz, CDCl3) δ =1.32 [s, 9 H, C(CH3)3], 1.4-2.4 (m, 8 H, CH2—CH2), 3.5-3.7 (m, 2 H, CH2OH), 4.1 (m, 1 H, CH2—CH—N), 4.24 (m, 1 H, N—CH—COOtBu), 5.05 (s, 2 H, CH2Ph), 7.25 (m, 5 H, aromatic).
- The general procedure D was followed using the alcohol and the crude was purified by flash chromatography (hexane/ethyl acetate 6:4) affording 18 with a yield of 82% —1H NMR (200 MHz, CDCl3), (signals were splitted for amidic isomerism): δ =1.32, 1.45 [2 s, 9 H, C(CH3)3], 1.5-2.7 (m, 8 H, CH2—CH2), 4.1 (m, 1 H, CH2—CH—N), 4.25 (m, 1 H, N—CH—COOR), 5.15 (s, 2 H, CH2Ph), 7.20-7.40 (m, H, aromatic), 9.6-9.8 (2 m, 1 H, CHO).
- Enamide (46):
- The general procedure A was followed using18 and the crude was purified by flash chromatography (hexane/ethyl acetate 6:4) affording the enamide with a yield of 90% (diastereomeric ratio Z/E=7:1) —1H NMR (200 MHz, CDCl3), (signals were splitted for amidic isomerism): δ =1.32, 1.42 [s, 9 H, C(CH3)3], 1.5-2.7 (m, 8 H, CH2—CH2), 3.71 (s, 1 H, COOCH3), 4.1 (m, 1 H, CH2—CH—N), 4.22 (m, 1 H, N—CH—COOtBu), 5.0-5.20 (m, 4 H, CH2Ph), 6.6 (m, 1 H, ═CH, 7.20-7.45 (m, 10 H, aromatic).
- The general procedure B was followed using the enamide and the crude residue was purified by flash chromatography yielding46 (98%). —1H NMR (200 MHz, CDCl3), (signals were splitted for amidic isomerism): δ =1.32, 1.42 [2 s, 18 H, C(CH3)3], 1.5-2.2 (m, 8 H, CH2—CH2), 3.71 (s, 1 H, COOCH3), 3.9 (m, 1 H, CH2—CH—N), 4.22 (m, 1 H, N—CH—COOtBu), 5.0-5.20 (m, 4 H, CH2Ph), 6.9 (m, 1 H, ═CH), 7.20-7.45 (m, 10 H, aromatic). —13C NMR (50.3 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =141.6, 128.4, 128.2, 128.1, 127.8, 127.7, 68.2, 66.8, 60.5, 58.1, 52.1, 31.3, 29.5, 27.1, 27.3, 24.6.
- trans-7,5-fused Bicyclic Lactam (6 a, 12 a):
- To a solution of 46 (0.093 g, 0.141 mmol) in MeOH (2 ml) was added 1N NaOH (0.705 mmol, 0.705 ml) and stirred for 1.5 h. The solution was acidified until
pH 3 with IN HCl, then the solution was evaporated. The crude was submitted to the next reaction without further purification. —1H NMR (200 MHz, CDCl3) (signals were splitted for amidic isomerism): δ =1.25, 1.48 [2 s, 18 H, C(CH3)3], 1.5-2.4 (m, 8 H, CH2—CH2), 4.1 (m, 1 H, CH2—CH—N), 4.3 (m, 1 H, N—CH—COOtBu), 5.12 (s, 2 H, CH2Ph), 6.65 (m, 1 H, ═C), 7.1-7.4 (m, 5 H, aromatic), 9.00 (bs, 1 H, ═COOH). - A solution of previous compound in xylene was refluxed for 48 h. The solvent was evaporated and the crude was purified by flash chromatography yielding6 a and 12 a with a 40% of yield.
-
-
- Using the bicyclic lactams prepared according to the preceding examples, the respective peptidomimetics compounds, containing the RGD sequence were prepared according to the method disclosed in Gennari et al.: Eur. J. Org. Chem., 1999, 379-388.
- Examples 14-47 may be read easier by making reference to FIGS.9-12.
- Reagents and solvents: Sasrin resin (200-400 mesh, 1.02 mmol/g) was purchased from Bachem. All the solvents used for the solid-phase synthesis were of HPLC quality or Analyticai Reagent grade and were dried over molecular sieves before use. Flash chromatography: silica gel (Kieselgel 60, 230-400 mesh). TLC: silica plates (60 F254, 0.25 mm, Merck). NMR: Bruker AC-200, AC-300 and Avance-400 (200 MHz, 300 MHz and 400 MHz for 1H, 50.3 MHz, 75.4 MHz and 100.5 MHz for 13C). Optical rotations: Perkin Elmer 241 polarimeter. Mass spectrometry: VG 7070 EQ-HF and PE-SCIEX API-100. Elemental analysis: Perkin Elmer 240. All solid-phase reaction were carried out on a wrist shaker.
- Abbreviations: DCM: dichloromethane, DIC: N,N′-diisopropylcarbodiimide, HOAt 1-hydroxy-7-azabenzotriazole, HOBt: 1-hydroxybenzotriazole, HATU: 0-(7-azabenzotriazol-1-yl)-N,N,N′,N′-tetramethyluronium hexafluorophosphate, TNBS: 2,4,6-trinitrobenzenesulfonic acid.
- TNBS test was performed following this procedure: a few resin beads were sampled and washed several times with ethanol. The sample was then placed in a vial and 1 drop of a 10% solution of DEPEA in DMF and 1 drop of 1% 2,4,6-trinitrobenzenesulfonic acid (TNBS) in DMF were added. The sample was then observed and colour changes were noted. The TNBS test is considered to be positive (presence of free amino groups) when the resin beads turn orange or red within 1 min and negative (no free amino groups) when the beads remain colourless.
-
General Procedure 1. - Preparation of N-Fmoc-Temp-OH (Templ-8). To a solution of the starting N-Boc-Temp-OtBu (0.62 mmol) in dichloromethane (4.8 ml) was added, under N2, trifluoroacetic acid (4.8 ml) and the resulting mixture was stirred at room temperature for 1 h. The solvents were then evaporated under reduced pressure, the crude residue was dissolved in THF (0.32 ml) and 10% Na2CO3 (0.77 ml) was added. After 15 min the solution was cooled to 0° C., a solution of Fmoc-ONSu (95 mg) in THF (1.4 ml) was added and the resulting mixture was stirred at room temperature for 3 h (TLC CHCl3/MeOH/AcOH 75:25:5). THF was then evaporated under reduced pressure, the aqueous phase was washed with AcOEt, conc. HCl was added to pH 3-4 and the solution extracted with AcOEt (3×5 ml). The combined organic layers were dried with Na2SO4 and evaporated under reduced pressure to afford the crude product as a white fbam, which was used without further purification.
- (3S,6S,9S)-1-aza-9-carboxy-3-(9′-fluorenylmetohxycarbonylamino)-2-oxo-bicyclo [4.3.0] nonane (Temp 1).
- Was prepared in quantitative overall yield following
general procedure 1. 1H NMR (200 MHz, C6D6, 3 23° K) δ =1.1-2.0 (m, 8 H, 4 CH2), 2.9 (m, 1 H, CH—N), 4.12 (dd, J1=J2=6.5 Hz, 1 H, CH—CH2O), 4.20-4.50 (m, 4 H, CH—NHFmoc, CHCO2H, CH2O) 6.30 (d, J=7 Hz, 1 H, NE), 7.10-7.30 (m, 4 H, aromatic), 7.45-7.65 (m, 4 H, aromatic), 11.2 (bs, 1 H, CO2H). -
- MS (FAB+): 421 (M+1).
- (3R,6S,9S)-1-aza-9-carboxy-3-(9′-fluorenylmethoxycarbonylamino)-2-oxo-bicyclo [4.3.0]nonane (Temp2).
- Was prepared in quantitative overall yield following
general procedure 1. 1HNMR—(200 MHz, C6D6, 323° K) δ =1.1-2.0 (m, 8 H, 4 CH2), 3.0 (m, 1 H, CH—N), 3.9 (m, 1 H, CH—NHFmoc), 4.12 (dd, J, =J2=6.5 Hz, 1 H, CH—CH2O), 4.25-4.55 (m, 3 H, CHCO2H, CH2O)), 6.02 (bs, 1 H, Nh), 7.10-7.25 (m, 4 H, aromatic), 7.45-7.60 (m, 4 H, aromatic), 7.70 (bs, 1 H Co2H). 13C NMR (50.3 MHz, CDCl3) δ =27.7, 27.8, 28.1, 31.3, 47.0, 51.8, 58.6, 60.5, 67.0, 119.8, 125.1, 127.0, 127.6, 141.1, 143.8, 156.5, 170.0, 173.2, 174.3. - MS (FAB+): 421 (M+1).
- (3S, 6R, 9S)-1-aza-9-carboxy-3-(9′-fluorenylmethoxycarbonylamino)-2-oxo -bicyclo [4.3.0]nonane (Temp3).
- Was prepared in quantitative overall yield following
general procedure 1. 1H-NMR (200 MHz, C6D6, 323° K) 632 1.1-2.0 (m, 8 H, 4 CH2), 3.0-3.2 (m, 1 H, CH—N), 4.20 (dd, J1=J2=7 Hz, 1 H, CH—CH2o), 4.25-4.50 (m, 4 H, CH—NHFmoc, CHCO2H, CH2o), 6.43 (d, J=1=7 Hz, 1 H, Nh), 7.10-7.30 (m, 4 H, aromatic), 7.40-7.80 (m, 4 H, aromatic), 10.80 (bs, 1 H, Co2h). 13C-NMR (50.3 MHz, CDCl3) δ =27.3, 27.4, 28.0, 32.5, 47.1, 51.9, 58.9, 60.2, 67.1, 119.8, 125.2, 127.0, 127.6, 141.2, 143.8, 143.9, 156.8, 169.5, 173.8. MS (FAB+): 421 (M+1). - (3R,6R,9S)-1-aza-9-carboxy-3-(9′-fluorenylmethoxycarbonylamino)-2-oxo-bicyclo[4.3.0]nonane (Temp4).
- Was prepared in quantitative overall vield following
general procedure 1. 1H-NMR (200 MHz, C6D6, 323° K) δ =0.8-1.9 (m, 8 H, 4 CH2), 3.15 (m, 1 H, CH—N), 4.10 (dd, J1=J2=6 Hz, 1 H, CH—CH2O), 4.30-4.60 (m, 4 H, CH—NHFmoc, CHCO2H, CH20), 6.20 (bs, 1 H, NH), 7.10-7.30 (m, 4 H, aromatic), 7.50-7.60 (m, 4 H aromatic), 9.80 (bs, 1 H, CO2H). 13C-NMR (50.3 MHz, CDCl3) 5=25.3, 26.6, 27.5, 32.1, 46.9, 49.9, 57.7, 58.8, 67.2, 119.8, 125.1, 127.0, 127.6, 141.1, 143.7, 143.8, 156.6, 173.1, 174.2. MS (FAB+): 421 (M+1). - (3S,7S,1OS)-1-aza-10-carboxy-3-(9′-fluorenylmethoxycarbonylamino)-2-oxo-bicyclo[5.3.0]decane (TempS).
- Was prepared in quantitative overall yield following
general procedure 1. 1H-NMR (200 MHz, CDCl3) δ =1.2-2.4 (m, 10 H, 5 CH2), 2.72 (s, 1 H CH—CH2O), 3.90 (m, 1 H, CH—N), 4.25 (m, 1 H, CH—CO2H), 4.4 (m, 2 H, CH2O), 4.75 (m, 1 H, CH—NHFmoc), 6.35 (d, J =5 Hz, 1 H, NH), 7.3-7.9 (m, 8 H, aromatic), 9.6 (s, CO2H). 13C-NMR (50.3 MHz, CDCl3) δ =25.36, 27.15, 27.39, 31.34, 32.97, 34.00, 47.20, 54.75, 59.39, 60.67, 67.08, 119.84, 125.07, 127.02, 127.59, 141.23, 143.84, 143.92, 155.78, 172.04, 174.67. MS (FAB+): 435 (M+1). - (3R;7S, 10S)-1-aza-10-carboxy-3-(9′-fluorenylmethoxycarbonylamino)-2-oxo -bicyclo [5.3.0] decane (Temp6).
- Was prepared in quantitative overall yield following
general procedure 1. 1H-NMR (200 MHz, CDCl3) δ =1.6-2.3 (m, 10 H, 5 CH2), 2.65 (s, 1 H, CH—CH2O), 3.98 (m, 1 H, CH—N), 4.22 (m, 1 H, CH—CO2H), 4.5 (m, 3 H, CH—NHFmoc, CH2O), 6.3 (bs, 1 H, NH), 7.28-7.85 (m, 8 H, aromatic), 9.6 (bs, 1 H, CO2H). 13C-NMR (50.3 MHz, CDCl3) δ =22.02, 25.25, 26.63, 32.96, 46.92, 58.54, 60.60, 61.76, 68.74, 119.91, 124.77, 124.82, 127.00, 127.7 1. MS (FAB+): 435 (M+1). - (3R,7R,10S)-1-aza-10-carboxy-3-(9′-fluorenylmethoxycarbonylamino)-2-oxo-bicyclo [5.3.0] decane (Temp7).
- Was prepared in quantitative overall yield following
general procedure 1. 1H-NMR (200 MHz, CDCl3) 67 =1.70-2.35 (m, 10 H, 5 CH2), 2.70 (m, 1 H, CH—CH2O), 4.05 (m, 1 H, CH—N), 4.25 (m, 1 H, CH—NHFmoc), 4.40 (m, 2 H, CH2O),4.65 (m, 1 H, CH—CO2H), 6.15 (bs, 1 H, NH), 7.10-7.80 (8 H, aromatic). 13C-NMR (50.3 MHz, CDCl3) δ =25.3, 26.9, 29.6, 32.1, 34.0, 47.0, 54.7, 59.4, 60.4, 67.1, 119.8, 119.9, 124.6, 125.1, 127.0, 127.5, 127.6, 131.1. MS (FAB+): 435 (M+1). -
General Procedure 2. - Preparation of N-Fmoc-Gly-0-Sasrin Resin.
- In a solid phase reaction vessel, Sasrin resin (500 mg, 0.51 mmol) was suspended in a solution of N-Fmoc-Gly-OH (455 mg, 1.53 mmol), HOBt (206 mg, 1.53 mmol), DIC (0.24 ml, 1.53 mmol) and DMAP (19 mg, 0.15 mmol) in DMF (10 ml) for 15 h. The solution was drained and the resin was washed with DMF (3×10 ml) and DCM (3×10 ml). The possibly unreacted hydroxy groups present were capped by treatment with a solution of acetic anhydride (0.096 ml, 1 mmol) and DMAP (57 mg, 0.51 mmol) in DMF (12 ml) for 2 h. The solution was drained and the resin washed with DMF (3×10 ml) and DCM (3×10 ml).
-
General Procedure 3. - Preparation of N-Fmoc-Arg(Pmc)-Gly-O-Sasrin Resin.
- In a solid phase reaction vessel, N-Fmoc-Gly-O-Sasrin resin (0.51 mmol) was treated with a 20% piperidine/DMF solution (10 ml, 1×3 min, 2×17 min). The solution was drained and the resin was washed with DMF (3×10 ml), MeOH (2×10 ml) and DCM (3×10 ml). The deprotection was assessed by performing a TNBS test. N-Fmoc-Arg(Pmc)-OH (1.014 g, 1.53 mmol) and HOAt (208 mg, 1.53 mmol) were dissolved in DCM/DMF 2:1 (10 ml). At 0° C., DIC (0.24 ml, 1.53 mmol) was added dropwise to this solution. The resulting mixture was stirred for 10 min at this temperature and for a further 10 min at room temperature, then added to the resin. This mixture was shaken at room temperature for 2.5 h. The solution was drained and the resin washed with DMF (3×10 ml) and DCM (3×10 ml). The success of the coupling was assessed by performing a TNBS test. The unreacted amino groups possibly present were capped by treatment with a solution of acetylimidazole (560 mg, 5.1 mmol) in DCM (12 ml) for 2 h. The solution was drained and the resin washed with DCM (3×10 ml).
-
General Procedure 4. - Preparation of N-Fmoc-Temp-Arg(Pmc)-Gly-O-Sasrin Resin.
- In a solid phase reaction vessel, N-Fmoc-Arg(Pmc)-Gly-O-Sasrin resin (0.51 mmol) was treated with a 20% piperidine/DMF solution (10 ml, 1×3 min, 2×17 min). The solution was drained and the resin was washed with DMF (3×10 ml), MeOH (2×10 ml) and DCM (3×10 ml). The deprotection was assessed by performing a TNBS test. The resin was suspended in a solution of N-Fmoc-Temp-OH (0.54 mmol), HATU (387 mg, 1.02 mmol), HOAt (139 mg, 1.02 mmol) and 2,4,6-collidine (0.135 ml, 1.02 mmol) in DMF/DCM 3:1 (13 ml) for 15 h. The solution was drained and the resin was washed with DMF (3×10 ml), MeOH (2×10 ml) and DCM (3×10 ml). The success of the coupling was assessed by performing a TNBS test. The unreacted amino groups possibly present were capped by treatment with a solution of acetylimidazole (560 mg, 5.1 mmol) in DCM (12 ml) for 2 h. The solution was drained and the resin was washed with DCM (3×10 ml).
-
General Procedure 5. - Preparation of N-Fmoc-Asp(tBu)-Temp-Arg(Pmc)-Gly-O-Sasrin Resin.
- In a solid phase reaction vessel, N-Fmoc-Temp-Arg(Pmc)-Gly-O-Sasrin resin (0.51 mmol) was treated with a 20% piperidine/DMF solution (10 ml, 1×3 min, 2×17 min). The solution was drained and the resin was washed with DMF (3×10 ml), MeOH (2×10 ml) and DCM (3×10 Ml). The deprotection was assessed by performing a TN-BS test. The resin was suspended in a solution of N-Fmoc-Asp(tBu)-OH (840 mg, 2.04 mmol), HATU (776 mg, 2.04 mmol), HOAt (278 mg, 2.04 mmol) and 2,4,6-collidine (0.27 ml, 2.04 mmol) in DMF/DCM 3:1 (13 ml) for 15 h. The solution was drained and the resin was washed with DMF (3×10 ml), MeOH (2×10 ml) and DCM (3×10 ml). The success of the coupling was assessed by performing a TNBS test. The unreacted amino groups possibly present were capped by treatment with a solution of acetylimidazole (560 mg, 5.1 mmol) in DCM (12 Ml) for 2 h. The solution was drained and the resin was washed with DCM (3×10 ml).
-
General Procedure 6. - Cleavage of H2N-Asp(tBu)-Temp-Arg(Pmc)-Gly-OH (1-7) from the Resin.
- In a solid phase reaction vessel, N-Fmoc-Asp(tBu)-Temp-Arg(Pmc)-Gly-O-Sasrin resin (739 mg) was treated with a 20% piperidine/DMF solution (10 ml, 1×3 min, 2×17 min). The solution was drained and the resin was washed with DMF (3×10 ml), MeOH (2×10 ml) and DCM (3×10 ml). The deprotection was assessed by performing a TNBS test. The resin was treated with 1% TFA/DCM solution (7.4 ml×3 min). The filtrates were immediately neutralized with a 18% pyridine/MeOH solution (0.89 ml). The fractions containing the product (TLC DCM/MeOH 8:2) were combined and concentrated under reduced pressure to yield a residue, which was purified from the pyridinium salts by size-exclusion chromatography (AMBERLITE XAD-2 resin, H2O then MeOH). Evaporation of the combined MeOH fractions containing the product afforded a yellow residue which was used in the successive reaction without further purification.
- H2N-Asp(tBu)-Templ-Arg(Pmc)-Gly-OH (1). Was prepared from the corresponding template in 40% overall yield following general procedures 2-6. 1H NMR (300 MHz, CD3OD) 6=1.30, 1.32 [2 s, 6 H, (CH3)2C—O], 1.43 [s, 9 H (CH3)3CO], 1.70 (m, 2 H, H—γ, Arg), 1.79-1.98 (m, 2 H, H—C8 Arg), 1.85 (m, 2 H, CH2CH2Ar), 1.9 (m, 2 H, H—C4 Temp), 2.1 (m, 4 H, H—C5 Temp, H—C7 Temp), 2.1 (s, 3 H CH3Ar), 2.2 (m, 2 H, H—C8 Temp), 2.4 (dd, J=9, 17, 1 H, H—CβAsp), 2.55, 2.57 (2s, 6 H, CH3Ar), 2.65 (m, 3 H, H—CβAsp, CH2CH2Ar), 3.25 (m, 2 H, H—CβArg), 3.65 (m, 1 H, H—C6 Temp), 3.71 (d, J=17, 1 H, H—C, Gly), 3.75-3.95 (m, 1 H, H—Cα Asp), 3.87 (m, 1 H, H—Cα Gly), 4.25 (m, 1 H, H—C3 Temp), 4.4 (dd, J=0.8, 1 H, H—C9 Temp), 4.88 (m, 1 H, H—Cα Arg). 13C-NMR (50.3 MHz, CD3OD) δ =12.3, 17.9, 19.0, 22.4, 24.2, 27.0, 28.4, 29.0, 30.7, 33.8, 38.1, 41.4, 42.2, 48.4. 49.2, 50.5, 52.7, 55.2, 55.8, 62.2, 62.3. MS (FAB+): 849 (M+1).
- H2N-Asp(tBu)-Temp2-Arg(Pmc)-Gly-OH (2).
- Was prepared from the corresponding template in 40% overall yield following general procedures 2-6. MS (FAB+): 849 (M+1).
- H2N-Asp(tBu)-Temp3-Arg(Pmc)-Gly-OH (3). Was prepared from the corresponding template in 55% overail yield following general procedures 2-6. 1H-NMR (300 MHz, CD3OD) δ =1.30 [2 s, 6 H, (CH3)2C—O], 1.46 [s, 9 H, (CH3)3CO], 1.6 (m, 2 H, H—C7 Temp), 1.70 (m, 2 H, H—Cγ Arg), 1.85 (m, 2 H, CH2CH2Ar), 1.95-2.2 (m, 2 H H—C4 Temp), 2.0 (m, 2 H, H—Cβ Arg), 2.1 (s, 3 H, CH3Ar), 2.2 (m, 2 H, H—C5 Temp), 2.4-2.6 (m, 2 H, H—Cβ Asp), 2.55-2.6 (2s, 6 H, CH3Ar), 2.65 (m, 2 H, CH2CH2Ar), 2.9 (m, 2 H, H—Cβ Temp), 3.2 (m, 2 H, H—C5 Arg), 3.6 (d, J=18, 1 H, H—Cα Gly), 3.80 (m, 1 H, H—C6 Temp), 4.0 (m, 1 H, H—C3 Temp), 4.05 (d, J=18, 1 H H—Cα Gly), 4.2 (dd, J=6,6, 1 H, H—C9 Temp), 4.4 (m, 1 H, H—Cα Arg), 4.45 (m, 1 H, H—Cα Asp). 13C-NMR (50.3 MHz, CD3OD) δ =12.3, 17.9, 19.0, 22.4, 27.0, 28.3, 28.6, 29.6, 30.0, 33.8, 37.0, 41.5, 43.3, 52.7, 54.2, 62.2, 74.9, 83.8, 119.4, 136.5, 169.7, 170.6, 173.9, 174.3. MS (FAB+): 849 (M+1).
- H2N-Asp (tBu)-Temp4-Arg(Pmc)-Gly-OH (4).
- Was prepared from the corresponding template in 30% overall yield following general procedures 2-6. MS (FAB+): 850 (M+2).
- H2N-Asp (tBu)-Temp5-Arg(Pmc)-Gly-OH (5).
- Was prepared from the corresponding template in 67% overall yield following general procedures 2-6. MS (FAB+): 863 (M+1).
- H2N-Asp(tBu)-Temp6-Arg(Pmc)-Gly-OH (6).
- Was prepared from the corresponding template in 54% overall yield following general procedures 2-6. MS (FAB+): 863 (M+1).
- H2N-Asp(tBu)-Temp7-Arg(Pmc)-Gly-OH (7).
- Was prepared from the corresponding template in 63% overall yield following general procedures 2-6. MS (FAB+): 863 (M+1).
- H2N-Asp(tBu)-Temp8-Arg(Pmc)-Gly-OH (8).
- Was prepared from the corresponding template in 50% overall yield following general procedures 2-6. MS (FAB+): 863 (M+1).
-
General Procedure 7. - Preparation of Cyclo[-Temp-Arg(Pmc)-Gly-Asp(tBu)-] (9-15). The linear peptide (0. 18 mmol) was dissolved in DMF (45 ml) under N2. HATU (205 mg, 0.54 mmol), HOAt (73 mg, 0.54 mmol) and 2,4,6-collidine (0.072 ml, 0.54 mmol) were added and the resulting mixture was stirred for 24 h at room temperature. The solvent was evaporated under reduced pressure and the residue was dissolved in AcOEt. The organic phase was washed twice with 5% NaHCO3, dried with Na2SO4 and evaporated under reduced pressure. The crude residue was purified by flash chromatography on silica gel (DCM/MeOH from 95:5 to 9: 1) to afford side-chain protected cyclopeptide as a yellow foam.
- Cyclo [-Temp 1-Arg(Pmc)-Gly-Asp(tBu)-] (9).
- Was prepared in 70% yield following
general procedure 7. 1H-NMR (300 MHz, CDCl3) δ =1.25, 1.3 [2 s, 6 H (CH3)2C—O], 1.46 [s, 9 H, (CH3)3CO], 1.5 (m, 2 H, H—Cy Arg), 1.6 (m, 2 H, H—C4 Temp), 1.8 (m, 4 H, CH2CH2Ar, H—C5Temp), 2.0 (m, 2 H, H—Cβ Arg), 2.1 (s, 3 H, CH3Ar), 2.2 (m, 4 H, H—C7 Temp, H—C8 Temp), 2.52, 2.56 (2 s, 6 H, CH3Ar), 2.6 (m, 3 H, CH2CH2Ar, H—Cβ Asp), 3.1 (dd, J=5, 17.6, 1 H, 20 H—Cβ Asp), 3.25 (m, 2 H, H—Cδ Arg), 3.55 (m, 1 H, H—C6 Temp), 3.65 (dd, J=6, 13.6, 1 H, H—Cα Gly), 3.85 (dd, J=4, 13.6, 1 H, H—Cα Gly), 4.22 (dd, J=0, 9, 1 H H—C9 Temp), 4.45 (m, 1 H, H—C3 Temp), 4.54 (m, 1 H, H—Cα Arg), 4.68 (m, 1 H, H—CαAsp), 6.3 (s, 3 H, H—Nε Arg, HNSO2, ═NH), 6.8 (d, J=6, 1 H, NHTemp), 7.61 (d, J=9, 1 NHAsp), 7.8 (d, J=8, 1 H, NHArg), 8.9 (bs, 1 H, NHGly). 13C-NMR (75.4 MHz, CDCl3) δ =12.1, 17.4, 18.5, 21.4, 25.2, 26.2, 26.8, 27.5, 28.0, 29.6, 31.4, 32.2, 32.9, 36.4, 40.2, 46.0, 47.7, 50.3, 51.9, 60.6, 62.1, 73.5, 81.8, 117.8, 123.8, 134.8, 134.9, 135.5, 153.3, 156.5, 168.0, 169.8, 170.2, 170.9, 173.6, 175.0. [α]D 20=−36.1 (c=1.0, CHCl3). MS (FAB+): 830 (M+), 853 (M+Na). - Cyclo [-Temp3-Arg(Pmc)-Gly-Asp(tBu)-] (10).
- Was prepared in 60% yield following
general procedure 7. 1H-NMR (400 MHz, CDCl3) δ =1.3 [2 s, 6 H, (CH3)2C—O], 1.45 [s, 9 H, (CH3)3CO], 1.5 (m, 4 H, H—Cγ Arg, H—C7 Temp), 1.7 (m, 1 H, H—Cβ Arg), 1.8 (m, 3 H, CH2CH2Ar, H—C8 Temp), 1.9 (m, 1 H, H—C4 Temp), 2.0 (m, 1 H, H—Cβ Arg), 2.05 (s, 3 H CH3Ar), 2.2 (m, 3 H, H—C4 Temp, H—C5 Temp), 2.50 (m, 2 H, H—C8 Asp, H—C8 Temp), 2.52, 2.56 (2 s, 6 H, CH3Ar), 2.6 (m, 2 H, CH2CH2Ar), 2.80 (dd, J=8, 16, 1 H, H—Cβ Asp), 3.25 (m, 2 H, H—Cδ Arg ), 3.45 (dd, J=5, 16, 1 H, H—Cα Gly), 3.80 (m, 1 H, H—C6 Temp), 4.10 (m, 1 H, H—C3 Temp), 4.15 (m, 1 H, H—Cα Gly), 4.35 (dd, J=10, 10, 1 H, H—C9 Temp), 4.5 (m, 1 H, H—Cα Arg), 4.70 (m, 1 H, H—Cα Asp), 6.22 (bs, 3 H, H-N” Arg, HNSO2, ═NH, 7.1 (d, J=8, 1 H, NH Arg), 7.20 (d, J=8, 1 H, NHAsp), 7.70 (d, J =8, 1 H, NH Temp), 8.1 (bs, 1 H, NH Gly). 13C NMR (50.3 MHz, CDCl3) δ =12.0, 17.4, 19.4, 21.3, 25.3, 26.7, 27.4, 27.9, 28.6, 29.6, 32.8, 36.7, 40.4, 45.1, 50.2, 50.7, 51.9, 60.7, 61.6, 73.5, 81.6, 117.8, 123.8, 133.7, 134.7, 135.3, 153.3, 156.3, 168.7, 169.8, 170.7, 171.4, 173.3. [α]D 20=−57.1 (c=1.0, CHCl3). MS (FAB+): 832 (M+2). - Cyclo [-Temp4-Arg(Pmc)-Gly-Asp(tBu)-] (11).
- Was prepared in 40% yield following
general procedure 7. 1H-NMR (400 MHz, CDCl3) δ =1.3 [2 s, 6 H (CH3)2C—o] 1.4 (m, 1 H, H—C5 Temp), 1.45 [s, 9 H (CH3)3CO], 1.5-1.6 (m, 4 H, H—Cγ Arg, H—C4 Temp, H—C8 Temp), 1.8 (m, 2 H, CH2CH2Ar), 1.97 (m, 1 H, H—C8 Temp), 2.0 (m, 4 H, H—Cβ Arg, H—C4 Temp, H—C5 Temp), 2.15 (s, 3 H, CH3Ar), 2.17, 2.43 (m, 2 H, H—C7 Temp), 2.5 (m, 1 H, H—Cβ Asp), 2.60 (s, 3 H, CH3Ar), 2.60 (m, 2 H, CH2CH2Ar), 2.62 (s, 3 H, CH3Ar), 2.9 (dd, J=7, 17, 1 H, H—Cβ Asp), 3.2 (m, 2 H, H—Cδ Arg), 3.55 (dd, J=0, 12, 1 H H—Cα Gly), 4.05 (m, 1 H, H—C9 Temp), 4.1 (m, 1 H, H—Cα Gly), 4.2 (m, 1 H, H—C6 Temp), 4.3 (m, 1 H, H—C3 Temp), 4.6 (m, 1 H, H—Cα Arg), 4.65 (m, 1 H, H—Cα Asp), 6.2-6.4 (bs, 3 H H—Nε Arg, HNSO2, ═NH), 7.3 (bs, 1 H, NH Temp), 7.45 (bs, 1 H NHArg), 7.90 (bs, 1 H, NHGly), 8.0 (bs, 1 H NH Asp). 13C-NMR (50.3 MHz, CDCl3) δ =12.0, 17.4, 18.4, 21.3, 22.0, 25.6, 26.2, 26.7, 27.9, 30.1, 32.7, 34.0, 35.0, 50.9, 51.0, 51.8, 56.5, 62.5, 73.5, 81.2, 95.0, 117.8, 123.9, 133.3, 134.7, 135.3, 153.4, 156.2, 170.4, 170.7, 171.9, 172.5, 173.3. [α]D 20=−71.0 (c=0.7, CHCl3). MS (FAB+): 832 (M+2). - Cyclo [-Temp5-Arg(Pmc)-Gly-Asp(tBu)-] (12).
- Was prepared in 35% yield following
general procedure 7. 1H-NMR (300 MHz, DMSO-D6) δ =1.25, 1.38 [2 s, 6 H (CH3)2CO] 1.31 (m, 2 H, H—Cγ Arg), 1.38 [s, 9 H, (CH3)3CO], 1.8 (m, 2 H, CH2CH2Ar), 2.05 (s, 3 H, CH3Ar), 2.05 (m, 1 H, H—C9 Temp), 2,15 (m, 2 H, H—Cα Arg), 2.35 (dd, J=6.8, 17, 1 H H—Cβ Asp), 2.50,2,52 (2 s, 6 H, 3 CH3Ar), 2.5 (m, 1 H, H—C9 Temp), 2.6 (m, 2 H, CH2CH2Ar), 2.8 (dd, J =8.6, 17, 1 H, H—Cβ Asp), 3.1 (m, 2 H, H—Cδ Arg), 3.61 (d, J=9.8, 1 H, H—Cα Gly), 3.98 (d, J=9.8, 1 H, H—Cα Gly), 4.0 (m, 2 H, H—Cα Arg, H—C7 Temp), 4.31 (m, 2 H, H—C3 Temp, H—C10 Temp), 4.55 (m, 1 H, H—Cα Asp), 6.48 (bs, 2 H, H—Nε Arg, HNSo2), 6.78 (bs, 1 H, ═NH), 7.68 (d, J=5.1, 1 H, NH Temp), 7.84 (bd, 1 NH Asp), 8.22 (m, 1 H, NH Arg), 8.5 (bt, 1 H, NH Gly). 13C-NMR (50.3 MHz, DMSO-D6) δ =11.9, 17.1, 18.2, 26.4, 27.7, 20.8, 25.3, 27.0, 30.6, 32.2, 32.5, 36.3, 38.7, 40.3, 42.4, 49.6, 53.1, 58.8, 62.0, 73.5, 80.3. [α]D 20=36.7 (c=1, CHCl3). MS (FAB+): 844 (M+). - Cyclo[-Temp6-Arg(Pmc)-Gly-Asp(tBu)-] (13). Was prepared in 26% yield following
general procedure 7. -
- Cyclo[-Temp7-Arg(Pmc)-Gly-Asp(tBu)-] (14). Was prepared in 15% yield following
general procedure 7. -
- Cyclo[-Temp8-Arg(Pmc)-Gly-Asp(tBu)-] (15). Was prepared in 55% yield following
general procedure 7. 1H-NMR (400 MHz, CDCl3) δ =1.27, 1.31 [2 s, 6 R (CH3)2C—O], 1.44 [s, 9 H, (CH3)3CO], 1.50 (m, 3 H, H—Cγ Arg, H—C6 Temp), 1.60 (m, 2 H, H—Cβ Arg, H—Cγ Arg), 1.70 (m, 2 H, H—C8 Temp), 1.8 (m, 2 H, CH2CH2Ar), 1.85 (m, 1 H, H—C4 Temp), 1.95 (m, 2 H, H—Cβ Arg, H—C4 Temp), 1.98 (m, 2 H, H—C5 Temp), 2.11 (s, 3 H, CH3Ar), 2.32 (m, 1 H, H—C9 Temp), 2.56 (s, 3 H CH3Ar), 2.57 (dd, J=7.4, 16.7, 1 H, H—Cβ Asp), 2.58 (s, 3 H CH3Ar), 2.65 (m, 2 H, CH2CH2Ar), 2.87 (dd, J=7.4, 16.7, 1 H, H—Cβ Asp), 3.20 (m, 2 H, H—C3 Arg), 3.54 (bd, 1 H, H—Cα Gly), 4.18 (m, 1 H, H—Cα Gly), 4.22 (m, 1 H, H—C7 Temp), 4.36 (m, 1 H, H—C10 Temp), 4.55 (m, 1H, H—C3 Temp), 4.6 (m, 1 H, H—Cα Arg), 4.83 (m, 1 H, H—Cα Asp), 6.33 (bs, 3 H, H—Nε Arg, HNSO2, ═NH), 7.49 (bd, 1 H, NH Arg), 7.71 (bt, 1 H, NH Gly), 7.80 (bd, 1 H, NH Temp), 7.95 (bd, 1 H, NH Asp). 13C NMR (50.3 MHz, CDCl3) δ =12.0, 17.4, 18.4, 26.7, 27.4, 36.4, 21.4, 25.3, 28.5, 29.6, 30.8, 33.0, 34.9, 40.6, 44.3, 49.9, 51.9, 54.1, 59.3, 63.2, 73.5, 81.3, 117.8, 123.9, 133.4, 134.7, 135.3, 153.5, 156.3, 170.3, 170.5, 172.3, 172.6. [cα]D 20=−54 (c=0.05, CHCl3). MS (FAB+): 844 (M+). -
General Procedure 8. - Preparation of Cyclo(-Temp-Arg-Gly-Asp-) (16-22).
- Side-chain protected cyclopeptide (0.1 mmol) was treated with TFA/thioanisole/1,2-ethanedithiol/anisole 90:53:2 (35 ml) for 2 h. The reaction mixture was evaporated under reduced pressure and the residue was dissolved in H2O. The aqueous phase was washed twice with iPr2O and evaporated under reduced pressure to afford side-chain deprotected cyclopeptide as a white foam. Trifluoroacetate ion was substituted with chloride by ion-exchange chromatography (AMBERLITE IRA-93 resin, chloride form).
- Cyclo(-Temp1-Arg-Gly-Asp-) (16). Was prepared in quantitative yield following
general procedure 8. 1H-NMR (400 MHz, D2O) δ =1.6-1.75 (m, 2 H, H—Cγ Arg), 1.65-1.95 (m, 6 H, H—C4 Temp, H—C5 Temp, H—C7 Temp), 2.2 (m, 2 H, H—Cβ Arg), 2.3-2.45 (m, 2 H, H—C8 Temp), 2.73 (dd, J=0, 6, 2 H, H—Cβ Asp), 3.25-3.50 (m, 2 H, H—Cδ Arg), 3.8-3.95 (m, 1 H, H—C6 Temp), 3.82 (d, J=13.5, 1 H, H—Cα Gly), 4.25 (d, J=13.5, 1 H, H—Cα Gly), 4.50 (dd, J=0, 10, 1 H, H—C9 Temp), 4.55 (dd, J=0, 8, 1 H, H—Cα, Arg), 4.58 (m, 1 H, H—C3 Temp), 4.75 (m, 1 H, H—Cα Asp). 13C NMR (75.4 MHz, D2O) 6=25.0, 26.4, 28.2, 29.8, 30.8, 32.2, 39.0, 41.3, 45.8, 48.3, 52.7, 53.1, 61.7, 62.6, 157.7, 170.1, 172.6, 174.0, 175.4, 175.7, 178.4. [α]D 20=−52.6 (c=0.88, H2O). MS (FAB+: 509 (M+1) - Cyclo(-Temp3-Arg-Gly-Asp-) (17). Was prepared in quantitative yield following
general procedure 8. 1H-NMR (400 MHz, D2O) δ =1.5 (m, 2 H, H—C5 Temp), 1.6 (m, 2 H, H—Cβ Arg), 1.8 (m, 2 H, H—C4 Temp), 1.9 (m, 2 H, H—Cγ Arg), 2.2 (m, 2 H, H—C7 Temp), 2.42-2.52 (m, 2 H, H—C8 Temp), 2.7-2.85 (m, 2 H, H—Cβ Asp), 3.15-3.30 (m, 2 H, H—Cδ Arg), 3.55 (d, J=14, 1 H, H—Cα Gly), 3.83-3.95 (m, 1 H, H—C6 Temp), 4.10 (d, J=14, 1 H, H—Cα Gly), 4.28 (m, 1 H, H—C3 Temp), 4.37 (dd, J=0, 9, 1 H, H—C8 Temp), 4.45 (dd, J=5, 10, 1 H, H—Cα Arg), 4.65 (m, 1 H, H—Cα Asp). 13C-NMR (50.3 MHz, D2O) δ =27.1, 29.3, 30.4, 31.4, 31.8, 35.1, 38.1, 43.3, 47.2, 52.8, 53.5, 54.8, 64.0, 64.5, 159.6, 166.1, 172.5, 174.8, 175.2, 176.4, 176.6, 177.9. [α]D 20=−94.6 (c=1.32, H2O) MS (IS+): 508 (M+). - Cyclo(-Temp4-Arg-Gly-Asp-) (18). Was prepared in quantitative yield following
general procedure 8. This compound was not stable in aqueous solution over a few days at room temperature. 1H-NMR (400 MHz, D2O) δ =1.6-1.7 (m, 2 H, H—C4 Temp), 1.7 (m, 2 H, H—Cγ Arg), 2.0 (m, 2 H, H—C7 Temp), 2.2 (m, 2 H, H—Cβ Arg), 2.4 (m, 2 H, H—C5 Temp), 2.6 (m, 2 H, H—C8 Temp), 2.70 (dd, J=7, 17, 1 H, H—Cβ Asp), 3.05 (dd, J=7, 17, 1 H, H—Cβ Asp), 3.15-3.25 (m, 2 H, H—C8 Arg), 3.52 (d, J=15, 1 H, H—Cα Gly), 4.05 (m, 1 H, H—C6 Temp), 4.28 (d, J=15, 1 H, H—Cα Gly), 4.3 (m, 1 H, H—C3 Temp), 4.35 (m, 1 H, H—C10 Temp), 4.53 (dd, J=7, 7, H—Cα Asp), 4.6 (m, 1H, H—Cα Arg). [α]D 20=−63.7 (c=0.95, H2O). MS (IS+): 508 (M+). - Cyclo(-Temp5-Arg-GIy-Asp-) (19). Was prepared in quantitative yield following
general procedure 8. 1H-NMR (400 MHz, D2O) δ =1.5-1.8 (m, 2 H, H—Cγ Arg), 1.7-2.0 (m, 2 H, H—Cβ Arg), 2.8 (m, 2 H, H—Cβ Asp), 3.22 (m, 2 H, H—Cδ Arg), 4. 0 (m, 2 H, H—Cα Gly, H—C7 Temp), 4.3 (dd, J=7, 7, 1 H, H—Cα Arg), 4.5-4.6 (m, 1 H, H—C3 Temp, H—C10 Temp), 4.68 (m, 1 H H—Cα Asp). 13C-NMR (50.3 MHz, D2O) δ =27.2, 29.8, 30.1, 31.0, 33.6, 35.3, 36.2, 39.0, 43.3, 45.7, 53.8, 56.3, 62.8, 65.2, 159.5, 174.3, 174.4, 175.6, 176.4, 178.5. [α]D 20=−87.4 (c=1.2, H2O). MS (IS+): 522 (M+). - Cyclo(-Temp6-Arg-Gly-Asp-) (20). Was prepared in quantitative yield following
general procedure 8. 1H-NMR (400 MHz, D2O) δ =1,5-1.8 (m, 2 H, H—C6 Temp), 1.6 (m, 2 H, H—Cγ Arg), 1.75-1.9 (m, 2 H, H—C β Arg), 1.8-1.95 (m, 2 H, H—C4 Temp), 2.15 (m, 4 H, H—C8 Temp, H—C9 Temp), 2.65-2.8 (m, 2 H, H—Cβ Asp), 3.2 (m, 2 H, H—Cδ Arg), 3.82 (d, J=17, 1 H, H—Cα Gly), 4.05 (d, J=17, 1 H H—Cα Gly), 4.1 (m, 1 H, H—C7 Temp), 4.37 (dd, J=0, 7, 1 H, H—C10 Temp), 4.42 (dd, J=0, 10, 1 H, H—C3 Temp), 4.52 (dd, J=5, 10, 1 H, H—Cα Arg), 4.70 (m, 1 H, H—Cα Asp). 13C-NMR (75.4 MHz, D2O) δ =22.3, 25.0, 25.9, 28.7, 30.4, 33.7, 34.2, 37.7, 41.4, 43.2, 51.5, 53.3, 57.5, 59.1, 63.6, 157.6, 171.6, 173.7, 174.2, 175.0, 176.9. [α]D 20=−47.9 (c=0.71, H2O). MS (IS+): 522 (M+). - Cyclo(-Temp8-Arg-Gly-Asp-) (22). Was prepared in quantitative yield following
general procedure 8. 1H-NMR (400 MHz, D2O) δ =1.4 (m, 3 H, H—C5 Temp, H—C8 Temp), 1.55-1.7 (m, 2H, H—Cγ Arg), 1.8 (m, 4 H, H—C4 Temp, H—C8 Temp, H—C9 Temp), 2.0 (m, 2 H, H—Cβ Arg), 2.26 (m, 2 H, H—C6 Temp), 2.38 (m, 1 H, H—C9 Temp), 2.68 (dd, J=7, 18, 1 H, H—Cα Asp), 2.98 (dd, J=7,18, 1 H, H—Cα Asp), 3.2 (m, 2 H, H—Cγ Arg), 3.5 (d, J=15,1 H, H—Cα Gly), 4.2 (d, J=15, 1 H, H—Cα Gly), 4.2 (m, 1 H, H—C7 Temp), 4.38 (m, 1 H, H—C10 Temp), 4.48 (dd, J=5, 11, 1 H, H—Cα Arg), 4.53 (dd, J=0, 11, 1 H, H—C3 Temp), 4.63 (dd, J=7, 7, 2 H, H—Cβ Asp). 13C-NMR (75.4 MHz, D2O) δ =27.4, 29.3, 30.2, 30.6, 33.0, 35.1, 36.2, 41.3, 46.1, 53.8, 54.9, 56.8, 62.8, 66.1, 159.5, 174.2, 174.8, 175.9, 176.4, 177.6. [α] - D20=−38.1 (c=1.2, H2O). MS (IS+): 522 (M+).
Claims (20)
10. A process for the preparation of the compounds of claim 1 comprising the following steps:
a) Horner-Emmons olefination of a compound of formula (II)
wherein
R is a lower alkyl residue;
R1 is a suitable nitrogen protecting group, to give a compound of formula (III);
wherein R3 is a suitable nitrogen protecting group, R4 is a lower alkyl residue;
b) hydrogenation of said compound of formula (III) and cyclisation; and, if desired
c) separation of the stereoisomeric mixture;
d) building of the RGD cyclic sequence; and, if desired
e) separation of the stereoisomeric mixture.
11. A process for the stereoselective synthesis of the compounds of claim 1 , comprising the following steps:
a) Horner-Emmons olefination of a compound of formula (II)
wherein
R is a lower alkyl residue;
R1 is a suitable nitrogen protecting group, to give a compound of formula (III);
wherein R3 is a suitable nitrogen protecting group, R4 is a lower alkyl residue;
b) hydrogenation of said compound of formula (III) by chiral phosphine-Rh catalysed hydrogenation and cyclisation; and, if desired
c) separation of the stereoisomeric mixture;
d) building of the RGD cyclic sequence; and, if desired
e) separation of the stereoisomeric mixture.
12. Pharmaceutical composition comprising a therapeutically or preventive effective dose of at least a compound of claim 1 in admixture with pharmaceutically acceptable vehicles and/or excipients.
13. A method for selectively inhibiting {acute over (α)}v{circumflex over (α)}3 integrin-mediated cell attachment to an RGD-containing ligand, comprising contacting said ligand with an effective amount of a compound of claim 1 .
14. A method for treating a subject suffering from a pathology related to an altered αvβ3 integrin-mediated cell attachment comprising administering to said subject a compound of claim 1 .
15. A method according to claim 14 , wherein said pathology is retinopathy.
16. A method according to claim 14 , wherein said pathology is acute renal failure.
17. A method according to claim 14 , wherein said pathology is osteoporosis.
18. A method for treating a subject suffering from altered angiogenesis, comprising administering to said subject a compound of claim 1 .
19. A method for the treatment of tumors in a subject comprising administering to said subject a compound of claim 1 .
20. A method according to claim 19 , wherein said tumor, is associated with metastasis.
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