SG11202101403YA - Methods and systems for detecting contamination between samples - Google Patents
Methods and systems for detecting contamination between samplesInfo
- Publication number
- SG11202101403YA SG11202101403YA SG11202101403YA SG11202101403YA SG11202101403YA SG 11202101403Y A SG11202101403Y A SG 11202101403YA SG 11202101403Y A SG11202101403Y A SG 11202101403YA SG 11202101403Y A SG11202101403Y A SG 11202101403YA SG 11202101403Y A SG11202101403Y A SG 11202101403YA
- Authority
- SG
- Singapore
- Prior art keywords
- samples
- systems
- methods
- detecting contamination
- contamination
- Prior art date
Links
Classifications
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/10—Sequence alignment; Homology search
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Engineering & Computer Science (AREA)
- Physics & Mathematics (AREA)
- Health & Medical Sciences (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Organic Chemistry (AREA)
- Analytical Chemistry (AREA)
- Biotechnology (AREA)
- General Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Evolutionary Biology (AREA)
- Molecular Biology (AREA)
- Genetics & Genomics (AREA)
- Bioinformatics & Computational Biology (AREA)
- Medical Informatics (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Theoretical Computer Science (AREA)
- Biochemistry (AREA)
- Microbiology (AREA)
- Immunology (AREA)
- General Engineering & Computer Science (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201862724622P | 2018-08-30 | 2018-08-30 | |
| PCT/US2019/049228 WO2020047513A1 (en) | 2018-08-30 | 2019-08-30 | Methods and systems for detecting contamination between samples |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| SG11202101403YA true SG11202101403YA (en) | 2021-03-30 |
Family
ID=67957435
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| SG11202101403YA SG11202101403YA (en) | 2018-08-30 | 2019-08-30 | Methods and systems for detecting contamination between samples |
Country Status (9)
| Country | Link |
|---|---|
| US (1) | US20200071754A1 (en) |
| EP (1) | EP3844759A1 (en) |
| JP (1) | JP2021536232A (en) |
| KR (1) | KR20210052501A (en) |
| CN (1) | CN112970068A (en) |
| AU (1) | AU2019331907A1 (en) |
| CA (1) | CA3109646A1 (en) |
| SG (1) | SG11202101403YA (en) |
| WO (1) | WO2020047513A1 (en) |
Families Citing this family (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN111445956B (en) * | 2020-04-23 | 2021-06-22 | 北京吉因加医学检验实验室有限公司 | Efficient genome data utilization method and device for second-generation sequencing platform |
Family Cites Families (23)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6582908B2 (en) | 1990-12-06 | 2003-06-24 | Affymetrix, Inc. | Oligonucleotides |
| US20030017081A1 (en) | 1994-02-10 | 2003-01-23 | Affymetrix, Inc. | Method and apparatus for imaging a sample on a device |
| ATE226983T1 (en) | 1994-08-19 | 2002-11-15 | Pe Corp Ny | COUPLED AMPLICATION AND LIGATION PROCEDURE |
| GB9620209D0 (en) | 1996-09-27 | 1996-11-13 | Cemu Bioteknik Ab | Method of sequencing DNA |
| GB9626815D0 (en) | 1996-12-23 | 1997-02-12 | Cemu Bioteknik Ab | Method of sequencing DNA |
| US6969488B2 (en) | 1998-05-22 | 2005-11-29 | Solexa, Inc. | System and apparatus for sequential processing of analytes |
| AR021833A1 (en) | 1998-09-30 | 2002-08-07 | Applied Research Systems | METHODS OF AMPLIFICATION AND SEQUENCING OF NUCLEIC ACID |
| US6818395B1 (en) | 1999-06-28 | 2004-11-16 | California Institute Of Technology | Methods and apparatus for analyzing polynucleotide sequences |
| US7501245B2 (en) | 1999-06-28 | 2009-03-10 | Helicos Biosciences Corp. | Methods and apparatuses for analyzing polynucleotide sequences |
| WO2001023610A2 (en) | 1999-09-29 | 2001-04-05 | Solexa Ltd. | Polynucleotide sequencing |
| US20030064366A1 (en) | 2000-07-07 | 2003-04-03 | Susan Hardin | Real-time sequence determination |
| DE60234464D1 (en) | 2001-11-28 | 2009-12-31 | Applied Biosystems Llc | Compositions and methods for selective nucleic acid isolation |
| US7169560B2 (en) | 2003-11-12 | 2007-01-30 | Helicos Biosciences Corporation | Short cycle methods for sequencing polynucleotides |
| US7302146B2 (en) | 2004-09-17 | 2007-11-27 | Pacific Biosciences Of California, Inc. | Apparatus and method for analysis of molecules |
| US20060073506A1 (en) * | 2004-09-17 | 2006-04-06 | Affymetrix, Inc. | Methods for identifying biological samples |
| US7170050B2 (en) | 2004-09-17 | 2007-01-30 | Pacific Biosciences Of California, Inc. | Apparatus and methods for optical analysis of molecules |
| US7482120B2 (en) | 2005-01-28 | 2009-01-27 | Helicos Biosciences Corporation | Methods and compositions for improving fidelity in a nucleic acid synthesis reaction |
| US7282337B1 (en) | 2006-04-14 | 2007-10-16 | Helicos Biosciences Corporation | Methods for increasing accuracy of nucleic acid sequencing |
| US9394567B2 (en) * | 2008-11-07 | 2016-07-19 | Adaptive Biotechnologies Corporation | Detection and quantification of sample contamination in immune repertoire analysis |
| US8835358B2 (en) | 2009-12-15 | 2014-09-16 | Cellular Research, Inc. | Digital counting of individual molecules by stochastic attachment of diverse labels |
| ES2711635T3 (en) | 2012-09-04 | 2019-05-06 | Guardant Health Inc | Methods to detect rare mutations and variation in the number of copies |
| US20160040229A1 (en) * | 2013-08-16 | 2016-02-11 | Guardant Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
| WO2018150378A1 (en) * | 2017-02-17 | 2018-08-23 | Grail, Inc. | Detecting cross-contamination in sequencing data using regression techniques |
-
2019
- 2019-08-30 WO PCT/US2019/049228 patent/WO2020047513A1/en unknown
- 2019-08-30 AU AU2019331907A patent/AU2019331907A1/en active Pending
- 2019-08-30 CN CN201980072064.3A patent/CN112970068A/en active Pending
- 2019-08-30 US US16/557,931 patent/US20200071754A1/en active Pending
- 2019-08-30 SG SG11202101403YA patent/SG11202101403YA/en unknown
- 2019-08-30 KR KR1020217009214A patent/KR20210052501A/en active Search and Examination
- 2019-08-30 JP JP2021510383A patent/JP2021536232A/en active Pending
- 2019-08-30 EP EP19769332.8A patent/EP3844759A1/en active Pending
- 2019-08-30 CA CA3109646A patent/CA3109646A1/en active Pending
Also Published As
| Publication number | Publication date |
|---|---|
| CA3109646A1 (en) | 2020-03-05 |
| WO2020047513A1 (en) | 2020-03-05 |
| AU2019331907A1 (en) | 2021-04-08 |
| KR20210052501A (en) | 2021-05-10 |
| JP2021536232A (en) | 2021-12-27 |
| US20200071754A1 (en) | 2020-03-05 |
| CN112970068A (en) | 2021-06-15 |
| EP3844759A1 (en) | 2021-07-07 |
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