OA17678A - Improved adenovirus formulations. - Google Patents

Improved adenovirus formulations. Download PDF

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OA17678A
OA17678A OA1201600073 OA17678A OA 17678 A OA17678 A OA 17678A OA 1201600073 OA1201600073 OA 1201600073 OA 17678 A OA17678 A OA 17678A
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formulation
concentration
ranging
formulations
adenovirus
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OA1201600073
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Janik Adriaansen
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Crucell Holland B.V.
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Abstract

The present invention provides pharmaceutical adenovirus formulations, in particular liquid pharmaceutical formulations comprising adenoviruses.

Description

The présent invention relates to adenovirus formulations and related pharmaceutical products for use in e.g. gene therapy and/or vaccine applications. In particular, liquid formulations for adenoviruses are disclosed herein, which improve the adénoviral stability by preserving quantity, potency (infectivity) and quality of the contained adenovirus when stored in about the 2-8°C range or higher while also being compatible with parentéral administration.
BACKGROUND OF THE INVENTION
Adenovirus vectors are considered the most efficient and widely used vehicles for gene delivery. An ongoing challenge in the field of gene therapy and vaccine research is to generate liquid adenovirus formulations which are able to stabilize these 15 viruses for longer periods of time within a realistic storage température range for pharmaceutical products, such as from about 2°C to about 8°C.
Biological activity of an adenovirus dépends upon the conformational integrity of at least a core sequence of nucléotides surrounded by an icosahedral capsid structure consisting of the capsid proteins. Unlike traditional organic and inorganic drugs, these 20 are highly complex biological structures and minor chemical or physical stressors can contribute to the dégradation of the adénoviral particle. A good formulation of adenovirus préparations is therefore of crucial importance to ensure a reasonable shelflife, but stabilizing these vectors poses particular challenges. Adenoviruses may lose potency as a resuit of physical instabilities, including dénaturation, aggregation (both 25 soluble and insoluble aggregate formation), précipitation and adsorption, as well as chemical instabilities, including hydrolysis, deamidation, and oxidation. Any of these dégradation routes can lead to lowered biologically activity, but can potentially also resuit in the formation of by-products or dérivatives having increased toxicity, and/or altered immunogenicity.
It therefore needs a tailored approach to find a robust formulation for adenoviruses ensuring stability over a wide range of conditions. Buffer type, pH and specialized excipients will need to be meticulously optimized to keep an adenovirus chemically, physically and biologically stable. In view of ail the factors that can be varied, fînding optimal conditions for formulating adenoviruses is burdened with challenges, and the composition of a good formulation is a priori unpredictable.
Lyophilized formulations exist and are stable. However they tend to be relatively expensive, require time consuming handling before administration, and potency might to a certain extent be lost in the lyophilization process. Liquid formulations that are stable under frozen conditions (-80°C) exist, but these require specialized shipment and expensive storage facilities, making a reliable cold chain almost impossible, especially at the periphery of the distribution network. A preferred formulation for adenoviruses is therefore a liquid formulation that offers adénoviral stability at a température range between 2-8°C or higher. Such a formulation can be stored in a regular fridge and can be administered quickly and easily.
Liquid formulations for adenoviruses hâve been described previously, for instance in Evans et al. 2004. The exemplified best formulations in said application are Tris buffered formulations having a pH ranging between 7.5 and 8.5. We hâve found herein that said formulations are suboptimal for adenoviruses. Formulations for adenoviruses are also disclosed in WO 00/29024, which mainly relates to lyophilizing techniques. Other formulations for adenoviruses comprising a polyol are mentioned in WO 00/29024.
Accordingly, there is a need in the art to find formulations which improve the adénoviral stability by preserving quantity and potency of the contained adenovirus during storage over a prolonged period of time. The adénoviral stability should also be retained in the case of agitation stress during transport or shear forces during production or clinical use, and under wide-ranging climatic conditions, in particular at elevated température or after repeated freeze/thaw cycles. Furthermore, the formulation should be suitable for the intended route of administration, should be well tolerated and should preferably hâve a composition with as little components as possible. It is an object of the invention to provide such formulations for adenoviruses.
SUMMARY OF THE INVENTION
We hâve found and describe herein, formulations for adenoviruses which improve the adenoviral-stability by preserving quantity and potency (infectivity) and quality of the adenovirus as compared to previously disclosed formulations. Remarkably, the combination of a citrate buffer having a pH ranging between 5.5 and
6.5 together with hydroxypropyl-beta-cyclodextrin (HBCD) resulted in an outstanding formulation for the préservation of quantity, potency (infectivity) and quality of adenoviruses, therewith improving overall adenoviral-stability as compared to other formulations known in the art.
As with ail excipients used for formulation development, some of the components présent in the formulation according to the présent invention are separately cited in the prior art. However, it is the very spécifie combination of several components that gives the présent formulation its outstanding properties and stabilizing potential. The exact formulation according to the présent invention was not disclosed in the prior art. In addition, it could not hâve been foreseen, based on the prior art in this inherently unpredictable field, that said formulation would provide such improved stability to adenoviruses.
The présent invention therefore relates to stabilized adenovirus formulations and related pharmaceutical products that can e.g. be used in gene therapy and/or vaccine applications.
The formulations according to the présent invention comprise a citrate buffer at a pH ranging between 5.5 and 6.5, and further comprise hydroxypropyl-betacyclodextrin (HBCD). The formulations additionally comprise a sait and a non-ionic detergent. Optionally, the formulations according to the présent invention further comprise a 2 or 4-carbon alcohol. The adénoviral formulations of the présent invention are amenable to prolonged storage at 2°C to 8°C or <-65 °C, for more than 6 months, 1 year, 1.5 year, 2 years, or more.
The adenovirus formulations of the présent invention comprise a) a recombinant adenovirus in a b) citrate buffered solution, which further comprises c) hydroxypropylbeta-cyclodextrin (HBCD); d) a sait; and e) a non-ionic detergent. In order to preserve the stability of the adenovirus it is essential that the pH of this formulation ranges between 5.5 and 6.5.
Preferably the formulation according to the présent invention comprises adenovirus at a titer ranging between about 1x10 vp/mL and 1x10 vp/mL.
In a preferred embodiment according to the présent invention the citrate concentration in the formulation ranges between about 5 mM and 30 mM.
Hydroxypropyl-beta-cyclodextrin (HBCD) is the preferred cryoprotectant. HBCD is preferably présent in a concentration ranging between about 1% (w/w) and 10% (w/w).
Sodium chloride (NaCl) is the preferred sait, which is preferably présent at a concentration ranging between about 20 mM and 200 mM.
Polysorbate-80 is the preferred non-ionic detergent which preferably has a concentration ranging between about 0.005% (w/w) and 0.5% (w/w).
In a more preferred embodiment according to the présent invention the formulation has a pH ranging between about 5.7 and 6.3, and comprises citrate at a concentration ranging between about 5 and 30 mM; HBCD at a concentration ranging between 1% (w/w) and 10% (w/w); NaCl at a concentration ranging between 20 mM and 200 mM; Polysorbate-80 at a concentration ranging between about 0.01% (w/w) and 0.05% (w/w).
In another preferred embodiment according to the présent invention the formulation has a pH ranging between about 5.8 and 6.2, and comprises citrate at a concentration ranging between about 15 and 25 mM; HBCD at a concentration ranging between 3% (w/w) and 8% (w/w); NaCl at a concentration ranging between 50 mM and 100 mM; Polysorbate-80 at a concentration ranging between about 0.01% (w/w) and 0.03% (w/w).
In an even more preferred embodiment the formulation according to the invention has a pH of about 6 and comprises citrate at a concentration of about 20 mM; HBCD at a concentration of about 5% (w/w); NaCl at a concentration of about 75 mM; Polysorbate-80 at a concentration of about 0.02% (w/w).
It was demonstrated herein that the addition of a 2 or 4-carbon alcohol, in particular éthanol, into the formulation of the présent invention, unexpectedly strongly protected adenoviruses against freeze/thaw damage and consequently worked as a cryoprotectant.
Therefore in a preferred embodiment, the formulation according to the invention further comprises a 2 or 4-carbon alcohol. In an even more preferred embodiment the formulation according to the invention comprises éthanol. The éthanol concentration is preferably ranging between about 0.1% (w/w) to 1% (w/w).
In a preferred embodiment according to the présent invention the formulation has a pH ranging between about 5.7 and 6.3, and comprises citrate at a concentration ranging between about 5 and 30 mM; HBCD at a concentration ranging between 1% (w/w) and 10% (w/w); NaCl at a concentration ranging between 20 mM and 200 mM; Polysorbate-80 at a concentration ranging between about 0.01% (w/w) and 0.05% (w/w); and éthanol at a concentration ranging between about 0.2% (w/w) and 0.6% (w/w).
In another preferred embodiment according to the présent invention the formulation has a pH ranging between about 5.8 and 6.2, and comprises citrate at a concentration ranging between about 15 and 25 mM; HBCD at a concentration ranging between 3% (w/w) and 8% (w/w); NaCl at a concentration ranging between 50 mM and 100 mM; Polysorbate-80 at a concentration ranging between about 0.01% (w/w) and 0.03% (w/w); and éthanol at a concentration ranging between about 0.2% (w/w) and 0.6% (w/w).
In an even more preferred embodiment the formulation according to the invention has a pH of about 6 and comprises citrate at a concentration of about 20 mM; HBCD at a concentration of about 5% (w/w); NaCl at a concentration of about 75 mM, Polysorbate-80 at a concentration of about 0.02% (w/w) and éthanol at a concentration of about 0.4% (w/w).
In another preferred embodiment the formulation according to the invention has a pH of about 6 and comprises citrate at a concentration of about 20 mM; HBCD at a concentration of about 5% (w/w); NaCl at a concentration of about 80 mM, Polysorbate-80 at a concentration of about 0.025% (w/w) and éthanol at a concentration of about 0.4% (w/w).
In an even more preferred embodiment the formulation according to the invention has a pH of about 6 and comprises citrate at a concentration of about 20 mM; HBCD at a concentration of about 5% (w/w); NaCl at a concentration of about 80 mM, Polysorbate-80 at a concentration of about 0.025% (w/w) and éthanol at a concentration of about 0.4% (w/w).
In another preferred embodiment of the présent invention the formulations are (frozen) liquid formulations. In yet another embodiment, the formulations of the présent invention are suitable for parentéral use.
In one embodiment, the formulations according to the présent invention are contained in a vial. In another embodiment, the formulations are contained in a bag or a bottle. In yet another embodiment the formulations are contained in a syringe or cartridge.
The présent invention also relates to a method of preserving an adenovirus which comprises preparing a formulation according to the présent invention.
In yet another embodiment, the présent invention relates to a method of preserving an adenovirus which comprises preparing a formulation as described herein and storing said formulation at a température ranging between 2°C and 8°C.
The enhanced long-term stability over a wide température range results in an extended shelf life of the virus formulations disclosed herein, allowing for storage and eventual host administration of these formulations over preferably about a 1-2 year period, or more with acceptable losses in virus potency (i.e. not more than 0.31og per two years at 2-8°C). In addition, formulations of the présent invention show stability during exposure to elevated températures, extended ffeeze/thaw cycles and agitation.
DESCRIPTION OF THE FIGURES
Figure 1. Potency (in log IU/mL) loss (Δ) of Ad26 during accelerated température at 25°C in Formulation B (open diamonds) and control formulation (closed circles). Mean Apotency (n=4) is shown, reflecting potencystressed sampie-Potency00ntroi sample· Potency has been measured by QPA.
Figure 2. Potency (in log IU/mL) loss (Δ) of Ad35 during accelerated température at 25°C in Formulation B (open diamonds) and control formulation (closed circles). Mean Apotency (n=4) is shown, reflecting potencystressed sampie-potencycontroi sample· Potency has been measured by QPA.
Figure 3. Thermal melting point of Ad26 in Formulation B and control formulation. TMA (Thermal melting assay) analysis (n=3) for Ad26 was performed on t=0 samples. Figure 4. Thermal melting point of Ad35 in Formulation B and control formulation. TMA (Thermal melting assay) analysis (n=3) for Ad35 was performed on t=0 samples. Figure 5. Delta Ct (ACt) values of Ad26 in Formulation B with and without NaCl, EDTA, éthanol and combinations thereof after 69 days at 25°C. The ACt values directly correlate with a loss in potency, where a higher number means more potency loss.
Figure 6. Delta Ct (ACt) values of Ad26 in Formulation B with and without NaCl, EDTA, éthanol and combinations thereof after 16 days at 35°C. The ACt values directly correlate with a loss in potency, where a higher number means more potency loss.
Figure 7. Delta Ct (ACt) values of Ad26 in Formulation B with and without NaCl, EDTA, éthanol and combinations thereof after 30 cycles of freeze/thawing foliowed by 1 day of agitation. The ACt values directly correlate with a loss in potency, where a higher number means more potency loss.
Figure 8. Turbidimetry measured by absorbance at 350 nm of Ad26 in Formulation B with and without NaCl, EDTA, éthanol and combinations thereof of t=0 (closed circles), 25°C for 69 days (open diamonds), 35°C for 16 days (closed triangles) and 30 cycles of freeze/thawing foliowed by agitation (open rectangles).
Figure 9. Intrinsic fluorescence of Ad26 in Formulation B with and without NaCl, EDTA, éthanol and combinations thereof of t=0 (closed circles), 25°C for 69 days (open diamonds), 35°C for 16 days (closed triangles) and 30 cycles of freeze/thawing followed by agitation (open rectangles).
Figure 10. Thermal melting point of Ad26 in Formulation F and control formulation. TMA analysis (n=3) for Ad26 was performed on t=0 samples.
Figure 11. Pair plot for the probability of success for CQA potency (APotency limit > 0.30 log IU/mL) with stress condition Freeze/thaw (FT) + agitation (AG) + storage at 35°C. The scale for the probability of success is from 0.4 (light grey) to 1 (black).The full experimental domain is explored. In the white square is the Design space proposed based on the plot.
DETAILED DESCRIPTION OF THE INVENTION
As mentioned previously, there is a need in the art to find formulations which improve the adénoviral stability by preserving quantity and potency of the contained adenovirus during storage over a prolonged period of time.
Several references disclose the use of spécifie components for the formulation of adenoviruses. Altaras et al. discloses citrate as part of a large list of possible inhibitor of free radical oxidation. Said list also contains the combination of EDTA and éthanol (EDTA/ethanol), which is identified as a further inhibitor of free radical oxidation. The formulation of the présent invention uses citrate as a buffer and not as an anti-oxidant.
Renteria et al. identifies hydroxypropyl-beta-cyclodextrin (HBCD) as one of the additives used to promote the stability of certain proteins and to avoid aggregation during nasal administration. Renteria et al. discloses the use of hydroxypropyl-betacyclodextrin in the context of a formulation appropriate for nasal administration enhancing mucosal uptake. Ail proteins are very different compared to live viruses such as adenoviruses, in terms of structure, charge, and size. Consequently, the stabilizing mechanism for adenoviruses is completely different and unpredictable in view of the stabilizing mechanism for proteins.
W0029024 discloses hydroxypropyl-beta-cyclodextrin as part of a large list of possible lyoprotectants used for preparing a ifeeze dried formulation. W0029024 relates to a freeze dried composition as opposed to a liquid composition as disclosed in the présent invention. The advantage of a liquid formulation is that it is less expensive, and the handling before administration is less time consuming and less prone to clinical dosing or reconstitution mistakes. Furthermore, scale up of lyophilization processes can be a cumbersome endeavor.
We hâve found and describe herein, formulations for adenoviruses which improve the adenoviral-stability by preserving quantity and potency (infectivity) and quality of the adenovirus as compared to previously disclosed formulations.
The formulations of the invention comprise at least one recombinant adenovirus. The construction of adénoviral vectors is well understood in the art and involves the use of standard molecular biological techniques, such as those described in, for example, Sambrook et al., Molecular Cloning, a Laboratory Manual, 2d ed., Cold Spring Harbor Press, Cold Spring Harbor, N.Y. (1989), Watson et al., Recombinant DNA, 2d ed., Scientific American Books (1992), and Ausubel et al., Current Protocols in Molecular Biology, Wiley Interscience Publishers, NY (1995), and other references mentioned herein. In short, the adénoviral vector can be déficient in at least one essential gene function of the El région, e.g., the El a région and/or the Elb région, of the adénoviral genome that is required for viral réplication. As known to the skilled person for producing adenovirus, in case of délétions of essential régions from the adenovirus genome, the functions encoded by these régions hâve to be provided in trans, preferably by the producer cell, for instance integrated in the genome, or in the form of so-called helper adenovirus or helper plasmids, when producing the recombinant adenovirus.
Propagation of a recombinant adenovirus has been described in detail in: US patent 6,492,169 or in WO 03/104467 U.S. Pat. Nos. 5,559,099, 5,837,511, 5,846,782, 5,851,806, 5,994,106, 5,994,128, 5,965,541, 5,981,225, 6,040,174, 6,020,191, and 6,113,913, and Thomas Shenk, Adenoviridae and their Réplication, M. S. Horwitz, Adenoviruses, Chapters 67 and 68, respectively, in Virology, B. N. Fields et al., eds., 3d ed., Raven Press, Ltd., New York (1996), which is incorporated here by reference. The replication-deficient adénoviral vector can be generated by using any species, strain, subtype, or mixture of species, strains, or subtypes, of an adenovirus or a chimeric adenovirus as the source of vector DNA (see for instance WO 96/26281, WO 00/03029). In certain embodiments of the présent invention, serotypes of human adenovirus include any one of serotypes 2, 4, 5, 7, 11, 26, 34, 35, 36, 48, 49 or 50 or any hybrid or mutated adenovirus serotypes. In a preferred embodiment of the présent invention the recombinant adenovirus is from human adenovirus serotype 5, 26 or 35.
In further embodiments, the adenovirus of the invention is a simian adenovirus, preferably a chimpanzee or gorilla adenovirus. These adenoviruses generally hâve a low seroprevalence and/or low pre-existing neutralizing antibody titers in the human population.
In further embodiments, the adenovirus of the invention further comprises heterologous nucleic acid. Suitable heterologous nucleic acid is well known to the skilled person, and for instance may include transgene open reading frames, for instance open reading frames coding for polypeptides against which an immune response is desired when the vector is used for vaccination purposes, e.g. transgenes suitable to generate an immune response against malaria (see e.g. WO 2004/055187), HIV, tuberculosis (see e.g. WO 2006/053871), certain viruses, etc, ail well known to the skilled person. In fact, the nature of the transgene is not critical to the current invention, it may be any heterologous nucleic acid sequence, and hence needs no further élaboration here.
The term “stability” as used herein refers to the relative résistance to dégradation of adenovirus particles in a formulation retaining its potency on the timescale of its expected usefulness. Preferably, the potency shows a decrease of not more than 0.31og per two years at 2-8°C.
The term “potency” as used herein refers to a measure of adenovirus activity expressed in ternis of infectious units measured in a cell-based potency assay, which is described hereunder.
A composition according to the invention shows a decrease in potency of not more than 0.41og per 60 days and a decrease in titer of not more than 0.31og per 60 days in an accelerated stability study which study is performed by incubation of the formulations at 25°C ± 2°C during 1 to 3 months.
A composition according to the invention also shows a decrease in potency of not more than 0.21og per 10 cycles in a study wherein vials are subjected to repeated freeze/thawing cycles followed by 24 hours of agitation at room température in a horizontal orientation at 200 rpm.
By “pharmaceutically acceptable excipient” is meant any inert substance that is combined with an active molécule such as a virus for preparing an agreeable or convenient dosage form. The “pharmaceutically acceptable excipient” is an excipient that is non-toxic to récipients at the dosages and concentrations employed, and is compatible with other ingrédients of the formulation comprising the viral préparation. Examples of excipients are cryoprotectants, non-ionic détergents, buffers, salts and inhibitors of ffee radical oxidation.
The term by-product includes undesired products, which detract or diminish the proportion of therapeutic/prophylactic adenovirus in a given formulation. Typical by-products include aggregates of the adenovirus and fragments of the adenovirus, resulting from e.g. protein dénaturation, deamidation, hydrolysis or combinations thereof. Typically, aggregates are complexes that hâve a molecular weight greater than the isolated virus particle.
A formulation which improves the adénoviral stability, also named a “stable formulation” as used herein is a formulation in which the adenovirus therein essentially retains its physical and/or chemical integrity and/or biological activity upon storage. Stability can be assessed by determining different characteristics such as the quantity (of adenovirus in a formulation), the potency, and/or other quality aspects of the adenovirus in the formulation over a period of time and under certain storage conditions. These characteristics of an adenovirus formulation can be measured at elevated températures (prédictive for real-time températures) or under other stress conditions, for instance formulations can be subjected to incubation at 25 °C or subjected to freeze/thaw cycles and agitation in order to study effects of different formulations maximizing shelf-life. Said characteristics which détermine the stability may be determined by at least one of the methods selected from the group consisting of visual inspection, virus particle quantitative polymerase chain reaction (vp-QPCR), QPCR-based Potency Assay (QPA), Reverse Phase High Performance Liquid Chromotography (RP-HPLC) and Differential Centrifugal Sédimentation (DCS), Thermal Melting Assay (TMA), Turbidimetry, and Intrinsic Fluorescence.
Virus particle quantitative polymerase chain reaction (vp-QPCR)
The vp-QPCR was developed for the quantification of adenovirus particles using primers that target a 100 bp région of the CMV promoter of the transgene cassette présent within the adenovirus vector. Briefly, this QPCR method relies on the exonuclease activity of Taq polymerase, which results in dégradation of a spécifie fluorescent probe annealed in the middle of the 100 bp amplicon. The probe is covalently linked to a light emitter and a quencher, and its dégradation frees the emitter from the quencher with a conséquent fluorescence émission proportional to the amount of template. Quantitative values are obtained from the threshold cycle (Ct), the cycle at which an increase in fluorescence signal exceeds a threshold value. The threshold for détection of DNA-based fluorescence is set slightly above background. The number of cycles at which the fluorescence exceeds the threshold is called the threshold cycle (Ct) or, according to the MIQE guidelines, quantification cycle (Cq) (Bustin et al, 2009). During the exponential amplification phase, the target DNA sequence doubles every cycle. For example, a DNA sample of which the Ct précédés that of another sample by 3 cycles contained 23 = 8 times more template. Consequently, a higher Ct value represents a lower amount of target DNA and a lower Ct value represents a high availability of target DNA. Absolute quantification can be performed by comparing a standard curve generated by a serial dilution of a stock adenovirus of which the concentration has been determined by the optical density at 260 nm (OD260). The Ct values of the test material is plotted against the Ct values of the standard curve, which generates an accurate and précisé number of vector particles.
When used as readout after incubation on El competent cells (QPA, see below), more degraded samples will lead to higher delta (t=0 subtracted) Ct values and more stabilizing formulations will lead to lower Ct values.
QPCR-based Potency Assay (QPA)
To quantify adenovirus potency, the QPA combines QPCR with a tissue culture-based infectivity assay. The assay is based on the experimental observation that the appearance of newly synthesized viral DNA is very rapid after inoculation of a cellmonolayer, and is proportional to the virus input concentration over a large range of multiplicity of infection (MOI). Dilutions of samples (non-endpoint diluted) are inoculated onto HEK293 cell monolayers in a 96-well plate. The infection is allowed to proceed for 3 hours at 35°C. Wells are aspirated and replenished with medium that does not contain adenoviruses. Plates are incubated for an additional 42 hours prior to cell lysis by means of Triton X-100 solution and a single freeze/ thaw step in order to release adenovirus DNA. A QPCR is performed on diluted cell lysâtes according to the method described above. The infectivity titer is calculated by comparison to a standard curve generated by the Ct values of a sample of known infectivity, which is determined by endpoint titration. Altematively, the delta potency can be expressed directly as Ct values since the infectivity titer, or potency, is directly correlated to the Ct values. Especially in comparing relative différences in potency between formulations, this is a quick and reliable method.
Reverse Phase High Performance Liquid Chromatography (RP-HPLC)
In order to détermine some quality aspects of an adenovirus, one can analyze adénoviral protein profiles by Reverse Phase High Performance Liquid Chromatography (RP-HPLC). HPLC séparâtes components of a mixture by using a variety of chemical interactions between the sample, the mobile phase (a buffer or solvent) and the stationary phase (a chromatographie packing material in a column). A high-pressure pump moves the mobile phase through the column and a detector shows the rétention times (t ; time between sample injection and the appearance of the peak maximum) of the molécules using UV absorbance détection at 280 nm. The séparation of RP-HPLC is based on différences in hydrophobicity. The non-polar stationary phase is made up of hydrophobie alkyl chains (chain lengths: C4, C8 and Cl8). The polar mobile phase is water with 0.1% trifluoroacetic (TFA). Compounds that bind to the columns are eluted using an increasing concentration of acetonitrile with 0.1% TFA. In general, an analyte with a larger hydrophobie surface area has a longer rétention time, whereas the presence of polar groups reduce rétention time. A typical adénoviral RPHPLC profile consists of 10 or 14 proteins, including core protein (VII), penton base (III) and hexon (II).
Differential Centrifugal Sédimentation (DCS)
DCS is a method to measure particle size distributions (aggregation) by sédimentation. In a dise centrifuge, parti clés settle in a sucrose gradient (of known viscosity and density) under high gravitational forces according to Stokes’ law. Sédimentation velocity increases with the square of the particle diameter, so particles that differ in size by only a few percent settle at significantly different rates. The time needed to reach the detector is used to calculate the size of the particles. The measurement range for this method is about 0.02 to 30 microns.
Thermal melting assay (TMA)
The thermal melting assay (TMA) can be used to détermine the melting température (Tm) of adenovirus in experimental formulations, which is the température where the viral capsid dénaturés. This viral disintegration can be measured real-time using a dsDNA intercalating fluorescent dye. This fluorescent dye only gives a fluorescence signal when bound to DNA, which is released when the viral particle disintegrates. The exponential fluorescence increase upon capsid melting can be measured using a common QPCR machine during a stepwise increase in température. Samples are diluted to the same concentration (range is 4xl09 to lxlO12 vp/mL) in the spécifie formulations and mixed with SYBRGreen dye (IX final concentration) in a volume of 50 pL. The température was increased 0.5°C per 30 seconds starting from 30°C up to 79°C. From the fluorescent raw data first and second dérivatives are calculated and melting température is read at the intercept of the second dérivative with the x-axis. Higher melting températures (Tm) may be indicative of a more stabilizing formulation.
Turbidity assay
Turbidimetry measures the loss of intensity of transmitted light due to scattering of particles in samples (apparent absorbance), detected at a wavelength where the molécules in the sample do not absorb light (e.g. 350 nm for samples in which proteins are the main chromophore). When molécules aggregate or form supramolecular complexes, the light scattering, which was random when coming from the separate particles, now becomes cohérent, and thereby the measured intensity increases. This makes light scattering and turbidimetry useful techniques for detecting aggregation and complex formation or dissociation.
In the turbidity assay, samples are transferred in triplicate to a UV-transparent, flat-bottom microplate. The plate is covered with a UV-transparent seal. Absorbance spectra are recorded by a microplate reader between 230 and 500 nm, and the absorbance at 975 nm is measured to détermine and possibly correct for différences in optical pathlength. Control samples consisting of the formulations without the adenovirus are included in the assay to correct for scattering or absorbing matrix components if required. The apparent absorbance at 350 nm is used as a quantitative measure for turbidity.
The turbidity assay is stability-indicating for adenovirus samples. Virus aggregation leads to an increase in turbidity and capsid dissociation to a decrease. The assay précision is < 5% (CV%) at turbidity values > 1 NTU.
The obtained turbidity for stressed samples should always be compared to the control samples. Since an increase or decrease after applied stress is dépendent on the dégradation pathway and spécifie for each Active Pharmaceutical Ingrédient (API), it cannot be predicted. A change (higher or lower) compared to the t=0 samples is indicative of a less stable formulation. Stressed samples comparable to the t=0 samples are expected to be more stable.
Intrinsic fluorescence assay
The adénoviral capsid proteins contain aromatic amino acids that reemit light after excitation, in particular tryptophan and to a lesser extent tyrosine and phenylalanine. The émission maximum and quantum yield of tryptophan dépend strongly on the polarity of its environment. In a polar, aqueous environment (e.g. the surface of a globular protein) the quantum yield is relatively low, while in an apolar environment (e.g. the inside of an aggregate) the quantum yield increases. This feature makes tryptophan fluorescence a useful tool for studying protein conformational change, aggregation, and molecular interactions.
In the intrinsic fluorescence assay, samples are transferred in triplicate to a UVtransparent, flat-bottom microplate. The plate is covered with a UV-transparent seal.
Tryptophan fluorescence is measured by a microplate reader using an excitation filter with a center wavelength of 280 nm and a bandwidth of 10 nm, and an émission filter with a center wavelength of 340 nm and a bandwidth of 10 nm. Bottom optic is used to minimize the influence of the seal and the meniscus shape.
The fluorescence intensity is known in the art to be a sensitive measure of adenovirus stability. Either an increase or a decrease may be observed upon stress, depending on the nature of the changes occurring in the sample. Protein unfolding and capsid dissociation is expected to lead to a decrease in intrinsic fluorescence, and aggregation is expected to lead to an increase. The précision of the assay is < 5% (CV%) in the range used.
The obtained fluorescence for stressed samples should always be compared to the control samples. Since an increase or decrease after applied stress is dépendent on the dégradation pathway and spécifie for each Active Pharmaceutical Ingrédient (API), it cannot be predicted. A change (higher or lower) compared to the t=0 samples is indicative of a less stable formulation. Stressed samples remaining close to the t=0 sample values are more stable.
An adenovirus retains its physical stability in a pharmaceutical formulation, if it, amongst others, shows minimal loss (i.e. 0.31og/2 years) in terms of quantity and potency, and displays no major protein modifications. Additionally, no signs of aggregation, précipitation, change of colour and/or clarity upon visual examination should be observed.
“About” as used in the présent application means ±10%, unless stated otherwise.
The présent invention relates to formulations which stabilize an adenovirus and to related pharmaceutical products, preferably for use in gene therapy and/or vaccine applications. A preferred stabilized virus containing formulation disclosed herein is a liquid adenovirus formulation, which shows improved adenoviral-stability when stored in about the 2-8°C range while also being compatible with parentéral administration. These formulations can however also be stored at lower températures, e.g. -20°C or lower, -40°C or lower, -65°C or lower, -80°C or lower. They may also be more stable at températures above 8°C, e.g. 25°C or even higher.
These formulations which are able to stabilize an adenovirus comprise a citrate buffer, hydroxypropyl-beta-cyclodextrin (HBCD), a sait and a non-ionic detergent, as well as optional additional components which enhance stability to the added virus. The pH of said buffer lies between 5.5 and 6.5.
The formulations of the présent invention provide stability to adenoviruses at varying virus concentrations, mono- or multivalent, and may be administered to a variety of vertebrate organisms, preferably mammals and especially humans. The stabilized viral formulations of the présent invention are adenoviral-based compositions, which can, for instance, be administered as a vaccine that may offer a prophylactic advantage to previously uninfected individuals and/or provide a therapeutic effect.
A preferred aspect of the invention is a formulation for recombinant adenoviruses (i.e., an adenovirus containing a whole or a portion of a transgene which is expressed within the target host subséquent to host administration, such as in any mammalian/human gene therapy-or gene vaccination-based methodology available to the skilled artisan) which shows enhanced stability characteristics described herein with a virus concentration in the range from about lxl O7 vp/mL (virus parti cl es/mL) to about lxlO13 vp/mL. A more preferred range is from about lxlO9 to lxlO13 vp/mL, with an especially preferred virus concentration being from about lxlO10 to 5x1ο12 vp/mL. Therapeutic or prophylactic compositions of the formulations of the présent invention can be administered to an individual in amounts sufficient to treat or prevent the respective disorder. The effective amount for human administration may, of course, vary according to a variety of factors such as the individuafs condition, weight, sex and âge. Other factors include the mode of administration. In a preferred embodiment, the formulations of the présent invention are suitable for parentéral use.
The formulations of the présent invention are citrate buffered solutions having a pH ranging between 5.5 and 6.5, further comprise hydroxypropyl-beta-cyclodextrin (HBCD) and optionally comprising a two or four carbon alcohol. Unexpectedly, said combination has proven to be an outstanding formulation for the préservation of quantity, potency (infectivity) and quality of adenoviruses, as demonstrated herein.
In a preferred embodiment, the concentration of citrate is ranging between about 5 mM and 30 mM, e.g. between about 5 mM and 25 mM, e.g. between about 10 mM and 25 mM, e.g. about 20 mM.
Another essential component in these formulations which contributes to virus stabilization over large température ranges and for prolonged storage periods is HBCD, which is used as a cryoprotectant. In a preferred embodiment, the concentration of HBCD is ranging between about 1% (w/w) to 10% (w/w), e.g. between about 3% (w/w) to 8% (w/w), e.g. between about 4% (w/w) to 6% (w/w), e.g. about 5% (w/w).
An additional component of the formulations of the présent invention is sait. Sait enhances viral stability. A purpose of inclusion of a sait in the formulation is to attain the desired ionic strength or osmolality and additionally optimize electrostatic interactions. Sait is présent at an osmolality which is physiologically acceptable to the host. Contributions to ionic strength may corne from ions produced by the buffering compound as well as from the ions of non-buffering salts. Salts that are appropriate for the formulations of the présent invention include but are not limited to sodium chloride (NaCl), Calcium chloride (CaCl2) or manganèse chloride (MnCl2). In contrast to the prior art, magnésium chloride (MgCl2) was shown to be detrimental to adenoviralstability. Therefore, in a preferred embodiment the formulation according to the présent invention is free from magnésium chloride.
In a preferred embodiment, the virus formulation according to the présent invention comprises sodium chloride (NaCl). In a preferred embodiment, the concentration of sodium chloride is ranging between about 10 mM and 250 mM, e.g. between about 20 mM and 200 mM, e.g. between about 30 mM and 150 mM, e.g. between about 50 mM and 100 mM, e.g. about 80 mM.
The formulations of the présent invention comprise at least one non-ionic detergent (also named non-ionic surfactant) added to reduce adsorption to container surfaces as well as possibly providing increased virus stabilization (e.g. by reducing aggregation). Non-ionic détergents for use in the formulations of the présent invention include but are not limited to polyoxyethylene sorbitan fatty acid esters, including but not limited to Polysorbate-80 (Tween 80®), Polysorbate-60 (Tween 60®), Polysorbate40 (Tween 40®) and Polysorbate-20 (Tween 20®), and the Pluronic sériés of non-ionic surfactants (e.g. Pluronic 121).
In a preferred embodiment, the concentration of non-ionic detergent is ranging between about 0.001% (w/w) to 1% (w/w), e.g. between about 0.005% (w/w) to 0.5% (w/w), e.g. between about 0.01% (w/w) to 0.1% (w/w), e.g. between about 0.01% (w/w) to 0.05% (w/w), e.g. between about 0.015% (w/w) to 0.03% (w/w), e.g. about 0.025% (w/w).
In a preferred embodiment, the virus formulation according to the présent invention comprises Polysorbate-80. The concentration of Polysorbate-80 is preferably ranging between about 0.001% (w/w) to 1% (w/w), e.g. between about 0.005% (w/w) to 0.5% (w/w), e.g. between about 0.01% (w/w) to 0.1% (w/w), e.g. between about 0.01% (w/w) to 0.05% (w/w), e.g. between about 0.015% (w/w) to 0.03% (w/w), e.g. about 0.025% (w/w).
In a preferred embodiment, the virus formulation according to the présent invention further comprises EDTA. In a more preferred embodiment, the concentration of EDTA is ranging between about 0.05 mM to 0.2 mM, e.g. between about 0.05 mM to 0.15 mM, e.g. between about 0.08 mM to 0.12 mM, e.g. about 0.1 mM.
In another preferred embodiment, the virus formulation according to the présent invention further comprises éthanol. In a more preferred embodiment, the concentration of éthanol is ranging between about 0.1% (w/w) to 1% (w/w), e.g. between about 0.2% (w/w) to 0.8% (w/w), e.g. between about 0.2% (w/w) to 0.6% (w/w), e.g. about 0.4% (w/w).
In a preferred embodiment, when the virus formulation according to the présent invention comprises éthanol it must not necessarily comprise EDTA at the same time.
In view of the discussion above, the présent invention relates to a formulation containing an adenovirus, such as a recombinant Ad5, Ad26 or Ad35, that can e.g. be used in gene therapy and/or gene vaccination applications, which show improved stability properties as compared to the best performing formulation known in the art (disclosed in Evans et al. 2004) and which at least contains a citrate buffer, HBCD as a cryoprotectant, a sait, and a surfactant.
A particular embodiment of the présent invention relates to such a recombinant adenovirus formulation which is buffered with citrate to a pH ranging between 5.5 and 6.5, and further comprises hydroxypropyl-beta-cyclodextrin (HBCD), a sait, a nonionic detergent, and a 2 or 4-carbon alcohol.
In a preferred embodiment according to the présent invention, the formulation comprises a citrate buffer with a pH ranging from about pH 5.5 to pH 6.5, comprises HBCD as the cryoprotectant, NaCl as the sait, Polysorbate-80 as the surfactant and a 2or 4-carbon alcohol as an additional unprecedented cryoprotectant.
In another preferred embodiment according to the présent invention, the formulation comprises a citrate buffer with a pH ranging from about pH 5.5 to pH 6.5, comprises HBCD as the cryoprotectant, NaCl as the sait, Polysorbate-80 as the surfactant and EDTA.
In another preferred embodiment according to the présent invention, the formulation comprises a citrate buffer with a pH ranging from about pH 5.5 to pH 6.5, comprises HBCD as the cryoprotectant, NaCl as the sait, Polysorbate-80 as the surfactant and éthanol as an additional unprecedented cryoprotectant.
In another preferred embodiment according to the présent invention, the formulation comprises a citrate buffer with a pH ranging from about pH 5.5 to pH 6.5, comprises HBCD as the cryoprotectant, NaCl as the sait, Polysorbate-80 as the surfactant. This formulation further comprises éthanol and is free of EDTA.
In a preferred embodiment according to the présent invention the formulation has a pH ranging between about 5.9 and 6.2, and comprises citrate at a concentration ranging between about 10 and 25 mM; HBCD at a concentration ranging between 4% (w/w) and 6% (w/w); NaCl at a concentration ranging between 70 mM and 100 mM; Polysorbate-80 at a concentration ranging between about 0.018% (w/w) and 0.035% (w/w); and éthanol at a concentration ranging between about 0.3% (w/w) to 0.45% (w/w).
In another preferred embodiment according to the présent invention the formulation has a pH ranging between about 5.8 and 6.2, and comprises citrate at a concentration ranging between about 15 and 25 mM; HBCD at a concentration ranging between 3% (w/w) and 8% (w/w); NaCl at a concentration ranging between 50 mM and 100 mM; Polysorbate-80 at a concentration ranging between about 0.01% (w/w) and 0.03% (w/w); and EDTA at a concentration ranging between about 0.05 mM to 0.15 mM.
In another preferred embodiment according to the présent invention the formulation has a pH ranging between about 5.9 and 6.2, and comprises citrate at a concentration ranging between about 10 and 25 mM; HBCD at a concentration ranging between 4% (w/w) and 6% (w/w); NaCl at a concentration ranging between 70 mM and 100 mM; Polysorbate-80 at a concentration ranging between about 0.018% (w/w) and 0.035% (w/w); and EDTA at a concentration ranging between about 0.05 mM to 0.15 mM.
In an even more preferred embodiment of the présent invention the formulation is buffered with about 20 mM citrate to a pH of about 6; HBCD is présent at a concentration of about 5% (w/w); NaCl is présent at a concentration of about 80 mM; the surfactant is Polysorbate-80 at a concentration of about 0.025% (w/w); and EDTA is présent at a concentration of about 0.1 mM.
In an even more preferred embodiment of the présent invention the formulation is buffered with about 20 mM citrate to a pH of about 6; HBCD is présent at a concentration of about 5% (w/w); NaCl is présent at a concentration of about 80 mM; the surfactant is Polysorbate-80 at a concentration of about 0.025% (w/w); and éthanol is présent at a concentration of about 0.4% (w/w). Additionally, combinations of the above mentioned factors can be used.
In one embodiment the formulations according to the présent invention are contained in a vial such as e.g. DIN 2R type I borosilicate glass vial. In another embodiment, the formulations are contained in a bag. Bags that contain the formulations of the présent invention may comprise layers made of e.g. Ethylene Vinyl Acetate Copolymer (EVA) or Ethyl Vinyl Alcohol (EVOH). In yet another embodiment of the présent invention, the formulations are contained in a syringe.
The recombinant virus formulations described herein can be administered to the vertebrate host (preferably a mammalian host and especially a human récipient) by any means known in the art. These routes of delivery include but are not limited to intramuscular injection, intraperitoneal injection, intravenous injection, inhalation or intranasal delivery, oral delivery, sublingual administration, subcutaneous administration, transdermal administration, intradermal administration, intraductal salivary gland administration, transcutaneous administration or percutaneous administration. In a preferred embodiment, the formulation of the présent invention is compatible with parentéral administration.
In accordance with the formulations disclosed herein, the présent invention also relates to methods of preserving an adenovirus which comprise preparing virus containing formulations as disclosed herein, such formulations which resuit in improved viral stability when stored below -65°C and in about the 2-8 °C range and possibly higher while also being compatible with parentéral administration, especially parentéral administration to humans.
Another aspect of the présent invention therefore relates to methods of preserving an adenovirus which comprise preparing a formulation as disclosed herein and storing said formulation at a température ranging between 2°C and 8°C.
The following examples are provided to illustrate the présent invention without, however, limiting the same hereto.
EXAMPLES
Example 1.
Experimental design and methodology
After having tested several different formulations, one formulation outperformed the others. This new formulation was named “Formulation B” and comprises 5% (w/w) HBCD, 20 mM citrate, 0.02% (w/w) PS-80 and 75 mM NaCl at a pH of 6.0.
Two Adénoviral (Ad35.TB-S and Ad26.Mosl.Gag-Pol) préparations (one comprising a serotype 35 adenovirus (Ad35) and one comprising a serotype 26 adenovirus (Ad26)) hâve been buffer-exchanged using PD-10 columns (GE Healthcare) into Formulation B.
Both adénoviral préparations hâve also been formulated in a “control formulation” which was described in Evans et al. 2004 and which was the best formulation available thus far. Said “control formulation” comprises 10 mM Tris, 10 mM Histidine, 1 mM MgCF, 75 mM NaCl, 5% (w/w) sucrose, 0.02 % (w/w) PS-80, 0.1 mM EDTA, 0.4 % (w/w) EtOH, at a pH of 7.4.
Per formulation, 12 columns were used; eluates were pooled, stérile fïltrated and stored at 2-8°C in a glass bottle. Samples were taken for viral titer détermination by vp-QPCR and ail titers were adjusted with the appropriate buffer formulation to
1.7x1ο11 vp/mL. Subsequently, the formulations were filled into glass vials (0.7 mL per vial), stoppered and capped.
The t=0 samples (control, 6 vials per group) were stored directly at <-65°C. Subsequently, six vials per group (n=6) were incubated at 25°C and frozen at <-65°C at t=l0, 20, 30, 40, 50, 60, 65, 70, 75, 80 and 90 days until sample analysis by QPA was performed in triplicate per sample.
In addition, t=0 samples for vectors in both formulations were analyzed by TMA (Thermal Melting Assay) to détermine the capsid melting température. A higher melting température correlates to higher thermal stability of the viral capsid. End point samples (t=90 days) were also analyzed by Reverse Phase High Performance Liquid
Chromatography (RP-HPLC) and Differential Centrifùgal Sédimentation (DCS) and compared to t=0 controls.
Results and conclusion
After the completion of the study, ail samples were analyzed by QPA and the loss in potency was expressed as deltas by subtracting the t=0 values. The formulation B, according to the présent invention (open diamonds) significantly (p=1.44E-05) outperformed the control formulation (closed circles) leading to less dégradation over time and a longer predicted shelf life (Table 1) for both adenoviruses (Figure 1 and 2). With Statistical Analysis System (SAS software), linear (Ad26) and quadratic (Ad35) models were fitted on the potency data using time and the square of the time as fixed effects. While the fixed ‘time’ effect represents the linear decrease in potency, the fixed ‘time*time’ effect represents the curvature of this decrease. Both effects were used in the model to evaluate their significance. The Akaike Information Criterion (AIC) is a measure for the relative quality of the statistical model, taking into account the complexity of the model and its accuracy of fit. The smaller the AIC, the better the model fits. In the linear model the slope represents the potency dégradation rate. By comparing slopes, the best buffer (lowest slope) can be identified.
Shelf lives correspond to the time points for which the lower limit of this interval pass under a given spécification (i.e. decrease in potency). For the quadratic model, to compute shelf life, the two-sided 95% confidence intervals around the mean were taken. Keeping only the lower bound for the shelf life assessment leads to a 97.5% confidence level for the univariate lower confidence interval. The intercepts (reflecting potency at t=0) were averaged and removed from the raw data and the model. The shelf lives were computed for both formulations.
Table 1: Shelf lives at 25°C derived from statistical analysis of dégradation curves (Figures 1 and 2).
Formulation B vs Control
Ad26-shelf life 36.1% longer
Ad35-shelf life 50.0% longer
The RP-HPLC did not show any signs of Adeno protein modifications nor oxidation. The DCS did not reveal any signs of aggregation. Furthermore, the formulation according to the présent invention led to a signifîcantly increased melting température for both Ad26 (Figure 3) and Ad35 (Figure 4) compared to the control formulation, indicating the increased stability of the adenoviruses in formulation B.
Example 2
Experimental design and methodology
After the experiments described in Example 1, formulation B was modified by adding or omitting one or several components (NaCl, Ethanol, EDTA or combinations thereof) yielding 8 experimental formulations (A to H, see Table 2) that were compared to the control formulation (described in Evans et al. and specified here-above). Ail formulations contain 5% HBCD, 20 mM citrate and 0.02% PS-80. As indicated in Table 2, the formulations further comprise 75 mM NaCl, 0.1 mM EDTA and/or 0.5% éthanol (EtOH). Adenoviruses (Ad26) were incubated in these 9 formulations for 69 days at 25°C or 16 days at 35°C or exposed to 30 cycles of freeze/thawing followed by agitation (1 day at room température). Potency loss was assessed by QPA and expressed as delta (t=0 subtracted) Ct (threshold cycle) values. Additionally, the absorbance at 350 nm was read as a measure for turbidity and the intrinsic fluorescence was measured to detect conformational protein changes and aggregation. Finally, a TM A and vp-QPCR were performed to détermine the melting température and the vp/IU ratio.
Table 2: Formulation composition. Ali formulations contain 5% HBCD, 20 mM citrate and
0.02% PS-80, some supplemented with NaCI:75 mM, EDTA: 0.1 mM and/or éthanol (EtOH): 0.5%(w/w).
Formulation NaCl EDTA EtOH
A -
B + - -
C + 1
D + + -
E - - + . S
F + - +
G ,+ J ( +
H + + +
Results and conclusion
Based on the 25 °C stability results shown in Figure 5, it can be concluded that the addition of NaCl in combination with EDTA (C and D) or éthanol (E and F) is clearly bénéficiai for the viral stability, where éthanol clearly outperforms EDTA. Unexpectedly, the combination of both EDTA and éthanol with or without NaCl does not lead to a more stable formulation (G and H). This is contrary to what would hâve been expected from the prior art e.g. Altaras et al, 2005, and Evans et al. 2004 wherein the spécifie combination of EDTA/EtOH is commonly referred as being an inhibitor of ffee radical oxidation and therewith a great enhancer of adénoviral stability.
Moving to a harsher model, 35°C for 16 days, the discriminating power becomes more pronounced, as can been seen in Figure 6. Clearly, the addition of NaCl is improving the stability and the bénéficiai effect of éthanol is confirmed in Figure 6. Surprisingly, the combination of EDTA together with éthanol, with or without NaCl, has a clear négative effect on the viral stability. This goes against the common perception that the combination of EDTA/EtOH performs well as an inhibitor of ffee radical oxidation (e.g. Altaras et al. 2005, and Evans et al. 2004). Taken together, both thermal stressors show the bénéficiai effect of NaCl in combination with either EDTA or éthanol in this particular formulation.
To investigate the performance of the formulations with a different dégradation route, said formulations (A to H) were exposed to a ffeeze/thaw cycle and agitation stress (Figure 7). The observed effects are both pronounced and unexpected. Clearly, EDTA (C and D) did not hâve any effect. On the other hand, éthanol strongly protected against ffeeze/thaw damage and consequently worked as a cryprotectant (E to H).
These unpredictable results hâve been confirmed by absorbance readings at 350 nm in a turbidimetry assay (Figure 8). Freeze/thawing (empty squares in Fig. 8) led to a decrease in turbidity compared to t=0, in the formulations without éthanol. This decrease was most likely due to disintegration of viral particles. In line with these observations, accelerated température stress (black triangles in Fig. 8) also resulted in a decrease in turbidity in the ethanol-ffee formulations, whereas the formulation with éthanol, specifically formulation F, displays no significant change compared to the t=0 (black circles in Fig. 8) samples.
In addition, the intrinsic fluorescence (Figure 9) further confirms the previous observations. The formulation without éthanol led to a substantial decrease in tryptophan fluorescence after freeze/thaw stress compared to t=0 (empty squares in Fig. 9) indicating severe conformational changes in the viral capsid. In sharp contrast, the formulations with éthanol are protecting the virus from this stressor. Thermal stress had only a minor impact on the formulations containing éthanol.
TMA data revealed a significantly increased melting température of formulation F compared to the control formulation (Figure 10), which is indicative of a more stable viral capsid in formulation F.
Importantly, the vp/IU ratio, reflecting the infectious proportion of the viral préparation (indicative of the quality of the virus particles), revealed higher values (less infectious particles per total amount of particles) in the control formulation compared to Formulation F after exposure to accelerated température (25°C), see table 3. This shows that formulation F is able to preserve the infectivity of adenoviruses in a much greater way compared to the control formulation.
Table 3: vp/IU ratios for Formulation F and control formulation at t=0 and t=61 at 25°C
Unstressed Stressed
Control Formulation 39 93
Formulation F 32 61
Ëxample 3.
Experimental design and methodology
To define the formulation buffer design space, the robustness range for each excipient was evaluated. After having selected the factors, an experimental range was defined for each component as reported in Table 4.
Design of experiment (DOE) approach was followed to map the experimental space. Using a design with a low and a high level for each of six factors (Table 4), 15 formulations were prepared - including three central points - to study the effect of each factor and possible interactions between the factors (Table 5) with high statistical power.
Table 4: Factors and levels used to compile the experimental space for the study
Formulation factor Buffer F Target level Form. buffer F Low level J J - High level
Buffer composition PH 6.0. . ' 5Λ - . 6.2 .
Citrate (mM) - 20 - ' 10 . . ' 25
HBCD (w/w) ' . *5V 3' * , ”6; .
EtOH (w/w) · 0.4 „ · 0.3 .·' 0.’5 '
PS-80 (w/w) • 0.02 · 0.015 ’ ., 0.04
NaCl (mM) 75- 5.0 100
Table 5. Design of experiment. Fifteen formulations were independently prepared, including three central points (gray rows), following the factors and levels used to 10 compile the experimental space for the study.
Name PH Citrate HBCD EtOH PS-80 NaCL Comments
F-01 6,2 20 3 0,5 0,04 50
F-02 5,8 25 3 0,3 0,04 75
F-00.1 6 20 5 0,4 0,02 75 central point
F-03 6 10 3 0,3 0,015 50
F-00.2 6 20 5 0,4 0,02 75 central point
F-04 6 25 6 0,5 0,04 100
F-00.3 6 20 5 0,4 0,02 75 central point
F-05 6,2 25 6 0,3 0,02 50
F-06 5,8 10 6 0,4 0,04 50
F-07 6,2 10 6 0,5 0,015 75
F-08 5,8 10 3 0,5 0,02 100
F-09 6,2 25 3 0,4 0,015 100
F-10 5,8 20 6 0,3 0,015 100
F-ll 5,8 25 5 0,5 0,015 50
F-13 6,2 10 5 0,3 0,04 100
To assess appropriate levels for each excipient and pH (the formulation robustness), each group was filled in glass vials and subjected to 10 freeze/thaw (F/T) 15 cycles, followed by 1 day agitation at 200 rpm at room température (RT) and storage for 7 days at 35°C (accelerated dégradation model). Potency by QPA (n=3) was then used as read out.
An Ad26 préparation has been buffer-exchanged using PD-10 columns (GE Healthcare) into each of the formulations listed in Table 5. Eluates of each formulation were pooled, stérile filtrated and stored at 2-8°C in a glass bottle. Samples were taken for viral titer détermination by vp-QPCR and ail titers were adjusted with the appropriate formulation to lxlO11 vp/mL. Subsequently, the formulations were filled into glass vials (0.75 mL per vial), stoppered and capped. The t=0 samples (control, 6 vials per group) were stored directly at <-65°C. Subsequently, four vials per group (n=4) were incubated ffeeze/thawed, agitated and stored at 35°C for 7 days (Table 6) until sample analysis by QPA was performed in triplicate per sample.
Results and conclusion
After the completion of the study, ail samples were analyzed by QPA and the loss in potency was expressed as deltas by subtracting the t=0 values. This data was used for the statistical analysis.
The output of the statistical analysis was the probability of success, in which success is defined as a stable formulation, meeting the spécifications set for the selected critical quality attribute (CQA): potency. Equivalence testing was carried out between TO and after stress: to compare équivalence, acceptance criteria were defined on the maximum loss of potency (IU/mL) that can be tolerated: in this experiment the tolerated potency loss was defined as APotency limit > -0.30 log IU/mL.
The experimental data obtained are shown in Table 6 and were used to reduce the experimental domain and compute a Design Space, based on potency.
The data contains 45 observations. There are 12 different buffers that hâve been tested in triplicates and an additional one that has been prepared three times separately and each independent préparation hâve been tested in triplicated (central points).
Table 6: Experimental values for each formulation expressed as APotency (log IU/mL)
Group Name APotency(log IUpermL) Remarks
F-01 -0,35
F-01 -0,29
F-01 -0,33
F-02 -0,29
F-02 -0,29
F-02 -0,32
F-00.1 -0,28 CENTRAL POINT
F-00.1 -0,27 CENTRAL POINT
F-00.1 -0,26 CENTRAL POINT
F-03 -0,3
F-03 -0,33
F-03 -0,24
F-00.2 -0,2 CENTRAL POINT
F-00.2 -0,28 CENTRAL POINT
F-00.2 -0,22 CENTRAL POINT
F-04 -0,18
F-04 -0,26
F-04 -0,24
F-00.3 -0,21 CENTRAL POINT
F-00.3 -0,18 CENTRAL POINT
F-00.3 -0,16 CENTRAL POINT
F-05 -0,2
F-05 -0,18
F-05 -0,2
F-06 -0,33
F-06 -0,25
F-06 -0,25
F-07 -0,18
F-07 -0,27
F-07 -0,14
F-08 -0,31
F-08 -0,28
F-08 -0,25
F-09 -0,28
F-09 -0,26
F-09 -0,2
F-10 -0,27
F-10 -0,26
F-10 -0,26
F-ll -0,31
F-ll -0,27
F-ll -0,25
F-13 -0,22
F-13 -0,15
F-13 -0,18
The following model has been fitted to the data: delta_log_potency[i] ~ normal(mu[i], sigma); for(i in l:Nobs){ mu[i] <- alpha 0 + alphajpH * pH[i] + alpha_Citrate * Citratefi] + alpha_HBCD * HBCD[i] + alpha_EtOH * EtOHfi] + alpha_PS_80 * PS_80[i] + alpha_NaCl * NaCl[i] + alpha_HBCD2 * HBCD[i] * HBCD[i] + alpha_PS_802 * PS_80[i] * PS_80[i] + alpha_pH_HBCD * pH[i] * HBCD[i] + alpha_pH_NaCl * pH[i] * NaCl[i] + alpha_r_Batch[batch[i]] ;
where alpha-r-batch represents the random batch and sigma the residual error.
To obtain prédictions from the model to obtain a risk based Design Space approach, the Bayesian framework has been adopted because the prédictive joint distribution of the CQA given the formulation parameters can be derived easily (see Peterson et al. and Lebrun et al.). The risk-based Design Space is defined using the following probability statement:
Design Space = {x e χ | P(CQAs E Λ | X = x,data) > π] (1)
In other words, the Design Space is a région of the experimental domain χ ' (often called knowledge space) where the posterior probability that the CQAs are within spécifications (A), is higher than a specifïed quality level π, given the observed data. This notation makes implicit the inclusion of the uncertainty included in statistical model. The probability is a direct measure of the guarantees to meet spécifications jointly. To compute this probability, the statistical models can be written as the following generic linear équation. For the j CQA, a model is adjusted:
y;= Xbj +ei5 with ei~N(0, σ2) (2) where is any transformation applied to the ith CQA in order to obtain good statistical properties (e.g. identity, log or logit transformations), i = 1,.. .,7. The model parameters bj and σ2 are to be estimated (see articles above).
The posterior probability of Equation (1) is computed from the prédictive distribution of new responses, identified as the following Student’s distribution (indices i are dropped for simplicity):
y |x,data~tn_p (χβ, S). (3)
This three-parameter Student’s distribution has n — p degrees of freedom (for n observations and p model parameters), is centered on the mean régression line χβ, computed from the ordinary least-square estimate of β: β = (X X) ^'y.
S = a. (1 + x (XX) !χ), where the parameter a is the residual sum of square, that is, a = (y — X[3)'(y — Χβ). Thus, S defines the scale of the Student’s distribution. Variance estimator is computed as S/(n — p).
To explore the experimental domain, it is not recommended to create a grid on 5 factors (because of a dimensionality problem: if 2 levels per factor were assessed, it would results in a 25-sized grid; if 10 levels per factors, it would lead to a 105-sized grid, etc.). Instead, a number of random samples were created and explored as followed:
a) Chose a high number random (uniformly distributed over %) operating conditions (factor settings) Xj within the experimental domain
b) For each operating condition: carry out a high number of simulations: Draw n* samples ÿy | Xj, data (1 = 1,...,n*) from the prédictive distributions as in Equation (3), for each CQA
c) From the different simulations of CQA prédiction, compute the proportion of samples within spécifications
This proportion is the posterior probability estimate to obtain quality outputs given the Critical Quality Attributes and their spécifications. Finally, it is proposed to visually assess the random operating distribution on pair plots of the projection of the results in two-dimensional spaces, to identify a Design Space (Figure 11)
The computations were then adapted and factor ranges were reduced to maximize the probability of success for CQA potency in these ranges (Table 7), which reflect the so-called Normal Operating Ranges (NOR) and the Design Space. The ranges shown in Table 7 ensure the highest probability of success to hâve a stable formulation. These ranges thus ensure optimal product stability.
Table 7. Design Space with selected factor ranges (NOR~
Formulation factor Spécification
pH 5.9-6.2
Citrate (mM) 10-25
HBCD (w/w) 4-6
EtOH (w/w) 0.3-0.45
PS-80 (w/w) 0.018-0.035
NaCI (mM) 70-100
References
Altaras N E et al. “Production and formulation of adenovirus vectors”, Advances in biochemical engineering, Springer, Berlin, DE, vol. 99, 1 November 2005.
Box, G. E., Hunter,W.G., Hunter, J.S., Hunter,W.G., Statistics for Experimenters: Design, Innovation, and Discovery, 2nd Edition, Wiley, 2005.
Bustin et al. 2009, “The MIQE Guidelines”, Clinical Chemistry 55:4.
Evans RK, Nawrocki DK, Isopi LA, Williams DM, Casimiro DR, Chin S, Chen M, Zhu DM, Shiver JW, Volkin DB. “Development of stable liquid formulations for adenovirus-based vaccines”, J Pharm Sci. 2004 Oct;93(10):2458-75.
Lebrun et al., Journal of Biopharmaceutical Statistics, 23: 1330-1351, 2013.
Peterson J.J., Journal of Biopharmaceutical Statistics, 18:959-975, 2008.
Radosevic K, Rodriguez A, Lemckert AA, van der Meer M, Gillissen G, Wamar C, von Eyben R, Pau MG, Goudsmit J. The Thl immune response to Plasmodium falciparum circumsporozoite protein is boosted by adenovirus vectors 35 and 26 with a homologous insert. Clin Vaccine Immunol. 2010 Nov;17(l 1):1687-94.
Renteria S S et al. “Development of a nasal adenovirus-based vaccine: Effect of concentration and formulation on adenovirus stability and infectious titer during actuation from two delivery devices” Vaccine, vol. 28, no.9, 25 February 2010.

Claims (18)

1. A formulation for adenoviruses comprising:
a) a recombinant adenovirus;
b) a citrate buffer;
c) hydroxypropyl-beta-cyclodextrin (HBCD);
d) a sait;
e) a non-ionic detergent;
wherein said formulation has a pH ranging between 5.5 and 6.5.
2. A formulation according to claim 1, wherein the citrate concentration is ranging between 5 mM and 30 mM.
3. A formulation according to claim 1 or 2, wherein the concentration of HBCD is ranging between 1% (w/w) to 10% (w/w).
4. A formulation according to any one of claims 1-3, wherein the sait is sodium chloride.
5. A formulation according to claim 4, wherein the sodium chloride concentration is ranging between 20 mM to about 200 mM.
6. A formulation according to any one of claims 1-5, wherein the non-ionic detergent is Polysorbate-80.
7. A formulation according to claim 6, wherein the Polysorbate-80 concentration is ranging between 0.005% (w/w) to 0.5% (w/w).
8. A formulation according to any one of claims 1-7, wherein said formulation has a pH ranging between 5.7 and 6.3, and comprises citrate at a concentration ranging between 5 and 30 mM; HBCD at a concentration ranging between 1% (w/w) and 10% (w/w); NaCl at a concentration ranging between 20 mM and 200 mM; Polysorbate-80 at a concentration ranging between 0.01% (w/w) and 0.05% (w/w).
9. A formulation according to any one of daims 1-8, wherein the formulation further comprises a 2 or 4-carbon alcohol.
10. A formulation according to claim 9, wherein the 2 or 4-carbon alcohol is éthanol.
11. A formulation according to claim 10, wherein the éthanol concentration is ranging between 0.1% (w/w) to 1% (w/w).
12. A formulation according to any one of daims 9-11, wherein said formulation has a pH ranging between 5.7 and 6.3, and comprises citrate at a concentration ranging between 5 and 30 mM; HBCD at a concentration ranging between 1% (w/w) and 10% (w/w); NaCl at a concentration ranging between 20 mM and 200 mM; Polysorbate-80 at a concentration ranging between 0.01% (w/w) and 0.05% (w/w); and éthanol at a concentration ranging between 0.2% (w/w) and 0.6% (w/w).
13. A formulation according to daim 12, wherein said formulation has a pH of 6, and comprises citrate at a concentration of 20 mM; HBCD at a concentration of 5% (w/w); NaCl at a concentration of 80 mM, Polysorbate-80 at a concentration of 0.025% (w/w) and éthanol at a concentration of 0.4% (w/w).
14. A formulation according to any one of daims 10-12, wherein said formulation has a pH ranging between 5.9 and 6.2, and comprises citrate at a concentration ranging between 10 and 25 mM; HBCD at a concentration ranging between 4% (w/w) and 6% (w/w); NaCl at a concentration ranging between 70 mM and 100 mM; Polysorbate-80 at a concentration ranging between 0.018% (w/w) and 0.035% (w/w); and éthanol at a concentration ranging between 0.3% (w/w) and 0.45% (w/w).
15. A formulation according to any one of daims 1-14, wherein said formulation is a liquid formulation.
16. A formulation according to any one of daims 1-15, wherein said formulation is suitable for parentéral use.
5
17. A method of preserving an adenovirus which comprises preparing a formulation according to any one of daims 1-16.
18. A method of preserving an adenovirus which comprises preparing a formulation according to any one of daims 1-16 and storing said formulation at a température ranging between 2°C and 10 8°C.
OA1201600073 2013-09-19 2014-09-16 Improved adenovirus formulations. OA17678A (en)

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