MXPA01002977A - Hydroxamate-containing cysteine and serine protease inhibitors - Google Patents
Hydroxamate-containing cysteine and serine protease inhibitorsInfo
- Publication number
- MXPA01002977A MXPA01002977A MXPA/A/2001/002977A MXPA01002977A MXPA01002977A MX PA01002977 A MXPA01002977 A MX PA01002977A MX PA01002977 A MXPA01002977 A MX PA01002977A MX PA01002977 A MXPA01002977 A MX PA01002977A
- Authority
- MX
- Mexico
- Prior art keywords
- alkyl
- compound
- substituted
- compound according
- aryl
- Prior art date
Links
- 239000002852 cysteine proteinase inhibitor Substances 0.000 title description 4
- 239000003001 serine protease inhibitor Substances 0.000 title description 4
- 230000002401 inhibitory effect Effects 0.000 claims abstract description 40
- 102000005927 Cysteine Proteases Human genes 0.000 claims abstract description 32
- 108010005843 Cysteine Proteases Proteins 0.000 claims abstract description 32
- 102000012479 Serine Proteases Human genes 0.000 claims abstract description 26
- 108010022999 Serine Proteases Proteins 0.000 claims abstract description 26
- 150000001875 compounds Chemical class 0.000 claims description 114
- 125000000217 alkyl group Chemical group 0.000 claims description 64
- -1 lower alkylamido Chemical group 0.000 claims description 47
- 239000000203 mixture Substances 0.000 claims description 41
- 125000003118 aryl group Chemical group 0.000 claims description 32
- 108091005771 Peptidases Proteins 0.000 claims description 22
- 239000004365 Protease Substances 0.000 claims description 22
- 201000010099 disease Diseases 0.000 claims description 22
- 125000003545 alkoxy group Chemical group 0.000 claims description 16
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 claims description 16
- 229910052799 carbon Inorganic materials 0.000 claims description 16
- 229910052739 hydrogen Inorganic materials 0.000 claims description 16
- 102000033147 ERVK-25 Human genes 0.000 claims description 15
- 125000001072 heteroaryl group Chemical group 0.000 claims description 15
- 239000001257 hydrogen Substances 0.000 claims description 15
- OKTJSMMVPCPJKN-UHFFFAOYSA-N carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 claims description 14
- 125000002102 aryl alkyloxo group Chemical group 0.000 claims description 13
- 125000004435 hydrogen atoms Chemical group [H]* 0.000 claims description 13
- 125000005346 substituted cycloalkyl group Chemical group 0.000 claims description 13
- 125000000753 cycloalkyl group Chemical group 0.000 claims description 12
- 125000003106 haloaryl group Chemical group 0.000 claims description 12
- 125000000484 butyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])C([H])([H])[H] 0.000 claims description 10
- 125000000539 amino acid group Chemical group 0.000 claims description 9
- 125000001584 benzyloxycarbonyl group Chemical group C(=O)(OCC1=CC=CC=C1)* 0.000 claims description 9
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 claims description 9
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 claims description 8
- 206010061218 Inflammation Diseases 0.000 claims description 7
- 230000004054 inflammatory process Effects 0.000 claims description 7
- 208000003627 Muscular Dystrophy Diseases 0.000 claims description 6
- 125000002877 alkyl aryl group Chemical group 0.000 claims description 6
- 125000000959 isobutyl group Chemical group [H]C([H])([H])C([H])(C([H])([H])[H])C([H])([H])* 0.000 claims description 6
- 125000004170 methylsulfonyl group Chemical group [H]C([H])([H])S(*)(=O)=O 0.000 claims description 6
- 201000006938 muscular dystrophy Diseases 0.000 claims description 6
- 125000001436 propyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])[H] 0.000 claims description 6
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 claims description 6
- 206010002027 Amyotrophy Diseases 0.000 claims description 5
- 210000001772 Blood Platelets Anatomy 0.000 claims description 5
- 208000006386 Bone Resorption Diseases 0.000 claims description 5
- 208000002177 Cataract Diseases 0.000 claims description 5
- 210000003169 Central Nervous System Anatomy 0.000 claims description 5
- 210000002161 Motor Neurons Anatomy 0.000 claims description 5
- 208000001738 Nervous System Trauma Diseases 0.000 claims description 5
- 230000001154 acute Effects 0.000 claims description 5
- 238000005054 agglomeration Methods 0.000 claims description 5
- 230000002776 aggregation Effects 0.000 claims description 5
- 125000003368 amide group Chemical group 0.000 claims description 5
- 230000024279 bone resorption Effects 0.000 claims description 5
- 230000004770 neurodegeneration Effects 0.000 claims description 5
- 230000004693 neuron damage Effects 0.000 claims description 5
- 125000003342 alkenyl group Chemical group 0.000 claims description 4
- 125000004453 alkoxycarbonyl group Chemical group 0.000 claims description 4
- 125000005422 alkyl sulfonamido group Chemical group 0.000 claims description 4
- 125000004390 alkyl sulfonyl group Chemical group 0.000 claims description 4
- 125000005332 alkyl sulfoxy group Chemical group 0.000 claims description 4
- 125000004414 alkyl thio group Chemical group 0.000 claims description 4
- 125000004104 aryloxy group Chemical group 0.000 claims description 4
- 125000003236 benzoyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C(*)=O 0.000 claims description 4
- 239000003937 drug carrier Substances 0.000 claims description 4
- 229910052736 halogen Inorganic materials 0.000 claims description 4
- 125000004184 methoxymethyl group Chemical group [H]C([H])([H])OC([H])([H])* 0.000 claims description 4
- 125000005420 sulfonamido group Chemical group S(=O)(=O)(N*)* 0.000 claims description 4
- 125000005931 tert-butyloxycarbonyl group Chemical group [H]C([H])([H])C(OC(*)=O)(C([H])([H])[H])C([H])([H])[H] 0.000 claims description 4
- 125000004093 cyano group Chemical group *C#N 0.000 claims description 3
- 125000002795 guanidino group Chemical group C(N)(=N)N* 0.000 claims description 3
- 125000000449 nitro group Chemical group [O-][N+](*)=O 0.000 claims description 3
- 239000008194 pharmaceutical composition Substances 0.000 claims description 3
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 claims description 3
- 150000002367 halogens Chemical group 0.000 claims description 2
- 150000002431 hydrogen Chemical class 0.000 claims 3
- 125000000547 substituted alkyl group Chemical group 0.000 claims 3
- 125000001316 cycloalkyl alkyl group Chemical group 0.000 claims 1
- 239000003112 inhibitor Substances 0.000 abstract description 13
- 229940042399 direct acting antivirals Protease inhibitors Drugs 0.000 abstract 1
- 239000000137 peptide hydrolase inhibitor Substances 0.000 abstract 1
- 239000000243 solution Substances 0.000 description 34
- XEKOWRVHYACXOJ-UHFFFAOYSA-N acetic acid ethyl ester Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 21
- 239000011780 sodium chloride Substances 0.000 description 20
- 238000007429 general method Methods 0.000 description 19
- KRKNYBCHXYNGOX-UHFFFAOYSA-N citric acid Chemical compound OC(=O)CC(O)(C(O)=O)CC(O)=O KRKNYBCHXYNGOX-UHFFFAOYSA-N 0.000 description 18
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 14
- 239000007787 solid Substances 0.000 description 13
- OKKJLVBELUTLKV-UHFFFAOYSA-N methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 12
- YMWUJEATGCHHMB-UHFFFAOYSA-N methylene dichloride Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 12
- 230000002829 reduced Effects 0.000 description 11
- 108010032088 Calpain Proteins 0.000 description 10
- 102000007590 Calpain Human genes 0.000 description 10
- FAPWRFPIFSIZLT-UHFFFAOYSA-M sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 10
- 230000000694 effects Effects 0.000 description 9
- 150000003839 salts Chemical class 0.000 description 9
- HEMHJVSKTPXQMS-UHFFFAOYSA-M sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 9
- SJRJJKPEHAURKC-UHFFFAOYSA-N n-methylmorpholine Chemical compound CN1CCOCC1 SJRJJKPEHAURKC-UHFFFAOYSA-N 0.000 description 8
- UIIMBOGNXHQVGW-UHFFFAOYSA-M NaHCO3 Chemical class [Na+].OC([O-])=O UIIMBOGNXHQVGW-UHFFFAOYSA-M 0.000 description 7
- 102000035443 Peptidases Human genes 0.000 description 7
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Chemical compound O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 7
- IAZDPXIOMUYVGZ-WFGJKAKNSA-N DMSO-d6 Chemical compound [2H]C([2H])([2H])S(=O)C([2H])([2H])[2H] IAZDPXIOMUYVGZ-WFGJKAKNSA-N 0.000 description 6
- NKLCNNUWBJBICK-UHFFFAOYSA-N Dess–Martin periodinane Chemical compound C1=CC=C2I(OC(=O)C)(OC(C)=O)(OC(C)=O)OC(=O)C2=C1 NKLCNNUWBJBICK-UHFFFAOYSA-N 0.000 description 6
- 150000001413 amino acids Chemical class 0.000 description 6
- NPZTUJOABDZTLV-UHFFFAOYSA-N hydroxybenzotriazole Substances O=C1C=CC=C2NNN=C12 NPZTUJOABDZTLV-UHFFFAOYSA-N 0.000 description 6
- 102000004190 Enzymes Human genes 0.000 description 5
- 108090000790 Enzymes Proteins 0.000 description 5
- VEXZGXHMUGYJMC-UHFFFAOYSA-N HCl Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 5
- 230000002159 abnormal effect Effects 0.000 description 5
- 235000001014 amino acid Nutrition 0.000 description 5
- 238000004587 chromatography analysis Methods 0.000 description 5
- 229910000041 hydrogen chloride Inorganic materials 0.000 description 5
- 238000006460 hydrolysis reaction Methods 0.000 description 5
- 239000010410 layer Substances 0.000 description 5
- 238000000034 method Methods 0.000 description 5
- 239000000758 substrate Substances 0.000 description 5
- NKCXQMYPWXSLIZ-PSRDDEIFSA-N (2S)-2-[[(2S)-1-[(2S)-5-amino-2-[[2-[[(2S)-6-amino-2-[[2-[[(2S)-2-[[(2S)-4-amino-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S,3R)-2-amino-3-hydroxybutanoyl]amino]-3-(1H-indol-3-yl)propanoyl]amino]-3-hydroxybutanoyl]amino]propanoyl]amino]-4-oxobutanoyl]amino]-3-m Chemical compound O=C([C@H](CCC(N)=O)NC(=O)CNC(=O)[C@H](CCCCN)NC(=O)CNC(=O)[C@@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@H](CC=1C2=CC=CC=C2NC=1)NC(=O)[C@@H](N)[C@@H](C)O)[C@@H](C)O)C(C)C)N1CCC[C@H]1C(=O)N[C@@H](CO)C(O)=O NKCXQMYPWXSLIZ-PSRDDEIFSA-N 0.000 description 4
- LMDZBCPBFSXMTL-UHFFFAOYSA-N 1-Ethyl-3-(3-dimethylaminopropyl)carbodiimide Chemical compound CCN=C=NCCCN(C)C LMDZBCPBFSXMTL-UHFFFAOYSA-N 0.000 description 4
- MDLAAYDRRZXJIF-UHFFFAOYSA-N Penfluridol Chemical class C1CC(O)(C=2C=C(C(Cl)=CC=2)C(F)(F)F)CCN1CCCC(C=1C=CC(F)=CC=1)C1=CC=C(F)C=C1 MDLAAYDRRZXJIF-UHFFFAOYSA-N 0.000 description 4
- 108090000190 Thrombin Proteins 0.000 description 4
- 230000001594 aberrant Effects 0.000 description 4
- 238000007792 addition Methods 0.000 description 4
- 239000012043 crude product Substances 0.000 description 4
- RTZKZFJDLAIYFH-UHFFFAOYSA-N diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 4
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 4
- 239000012044 organic layer Substances 0.000 description 4
- 125000004430 oxygen atoms Chemical group O* 0.000 description 4
- 238000007911 parenteral administration Methods 0.000 description 4
- 235000018102 proteins Nutrition 0.000 description 4
- 102000004169 proteins and genes Human genes 0.000 description 4
- 108090000623 proteins and genes Proteins 0.000 description 4
- 229960004072 thrombin Drugs 0.000 description 4
- 229940088598 Enzyme Drugs 0.000 description 3
- 102000003777 Interleukin-1 beta Human genes 0.000 description 3
- 108090000193 Interleukin-1 beta Proteins 0.000 description 3
- 208000006011 Stroke Diseases 0.000 description 3
- 125000003710 aryl alkyl group Chemical group 0.000 description 3
- 230000037396 body weight Effects 0.000 description 3
- 125000004432 carbon atoms Chemical group C* 0.000 description 3
- 238000006243 chemical reaction Methods 0.000 description 3
- 239000003814 drug Substances 0.000 description 3
- 125000005843 halogen group Chemical group 0.000 description 3
- 125000005842 heteroatoms Chemical group 0.000 description 3
- 239000000741 silica gel Substances 0.000 description 3
- 229910002027 silica gel Inorganic materials 0.000 description 3
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 3
- 238000003756 stirring Methods 0.000 description 3
- 230000001225 therapeutic Effects 0.000 description 3
- 210000001519 tissues Anatomy 0.000 description 3
- 108090000617 Cathepsin G Proteins 0.000 description 2
- 102000004173 Cathepsin G Human genes 0.000 description 2
- MTCFGRXMJLQNBG-UWTATZPHSA-N D-serine Chemical compound OC[C@@H](N)C(O)=O MTCFGRXMJLQNBG-UWTATZPHSA-N 0.000 description 2
- 238000006646 Dess-Martin oxidation reaction Methods 0.000 description 2
- 102100003966 ELANE Human genes 0.000 description 2
- 101710007283 ELANE Proteins 0.000 description 2
- RFDAIACWWDREDC-FRVQLJSFSA-N Glycocholic acid Chemical compound C([C@H]1C[C@H]2O)[C@H](O)CC[C@]1(C)[C@@H]1[C@@H]2[C@@H]2CC[C@H]([C@@H](CCC(=O)NCC(O)=O)C)[C@@]2(C)[C@@H](O)C1 RFDAIACWWDREDC-FRVQLJSFSA-N 0.000 description 2
- 206010061255 Ischaemia Diseases 0.000 description 2
- 208000010125 Myocardial Infarction Diseases 0.000 description 2
- 108010067372 Pancreatic Elastase Proteins 0.000 description 2
- 102000016387 Pancreatic Elastase Human genes 0.000 description 2
- 206010039073 Rheumatoid arthritis Diseases 0.000 description 2
- AKHNMLFCWUSKQB-UHFFFAOYSA-L Sodium thiosulphate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=S AKHNMLFCWUSKQB-UHFFFAOYSA-L 0.000 description 2
- FYSNRJHAOHDILO-UHFFFAOYSA-N Thionyl chloride Chemical compound ClS(Cl)=O FYSNRJHAOHDILO-UHFFFAOYSA-N 0.000 description 2
- 150000001412 amines Chemical class 0.000 description 2
- 150000003863 ammonium salts Chemical class 0.000 description 2
- 125000004429 atoms Chemical group 0.000 description 2
- 230000015572 biosynthetic process Effects 0.000 description 2
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 description 2
- 239000003153 chemical reaction reagent Substances 0.000 description 2
- 239000003795 chemical substances by application Substances 0.000 description 2
- 239000000470 constituent Substances 0.000 description 2
- 238000001816 cooling Methods 0.000 description 2
- 125000004122 cyclic group Chemical group 0.000 description 2
- 230000003412 degenerative Effects 0.000 description 2
- JJTUDXZGHPGLLC-UHFFFAOYSA-N dilactide Chemical compound CC1OC(=O)C(C)OC1=O JJTUDXZGHPGLLC-UHFFFAOYSA-N 0.000 description 2
- 229940079593 drugs Drugs 0.000 description 2
- 125000000524 functional group Chemical group 0.000 description 2
- DHMQDGOQFOQNFH-UHFFFAOYSA-N glycine Chemical compound NCC(O)=O DHMQDGOQFOQNFH-UHFFFAOYSA-N 0.000 description 2
- 125000000623 heterocyclic group Chemical group 0.000 description 2
- 230000002132 lysosomal Effects 0.000 description 2
- 125000001624 naphthyl group Chemical group 0.000 description 2
- 125000001820 oxy group Chemical group [*:1]O[*:2] 0.000 description 2
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 description 2
- 125000006239 protecting group Chemical group 0.000 description 2
- 238000000746 purification Methods 0.000 description 2
- 235000019345 sodium thiosulphate Nutrition 0.000 description 2
- 239000000126 substance Substances 0.000 description 2
- 238000003786 synthesis reaction Methods 0.000 description 2
- 238000004809 thin layer chromatography Methods 0.000 description 2
- 238000001665 trituration Methods 0.000 description 2
- DGVVWUTYPXICAM-UHFFFAOYSA-N 2-mercaptoethanol Chemical compound OCCS DGVVWUTYPXICAM-UHFFFAOYSA-N 0.000 description 1
- KRKNYBCHXYNGOX-UHFFFAOYSA-K 2qpq Chemical compound [O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O KRKNYBCHXYNGOX-UHFFFAOYSA-K 0.000 description 1
- 206010001897 Alzheimer's disease Diseases 0.000 description 1
- 108009000433 Amyotrophic lateral sclerosis (ALS) Proteins 0.000 description 1
- 102000015427 Angiotensins Human genes 0.000 description 1
- 108010064733 Angiotensins Proteins 0.000 description 1
- 206010003210 Arteriosclerosis Diseases 0.000 description 1
- 206010003246 Arthritis Diseases 0.000 description 1
- 208000006673 Asthma Diseases 0.000 description 1
- 206010006451 Bronchitis Diseases 0.000 description 1
- 102100006972 CMA1 Human genes 0.000 description 1
- 108090000712 Cathepsin B Proteins 0.000 description 1
- 102000004225 Cathepsin B Human genes 0.000 description 1
- 102000005600 Cathepsins Human genes 0.000 description 1
- 108010084457 Cathepsins Proteins 0.000 description 1
- 206010008190 Cerebrovascular accident Diseases 0.000 description 1
- 108090000227 Chymases Proteins 0.000 description 1
- 108090001092 Clostripain Proteins 0.000 description 1
- 210000002808 Connective Tissue Anatomy 0.000 description 1
- 208000004981 Coronary Disease Diseases 0.000 description 1
- 229940009976 Deoxycholate Drugs 0.000 description 1
- 206010012601 Diabetes mellitus Diseases 0.000 description 1
- 229940022766 EGTA Drugs 0.000 description 1
- 206010014561 Emphysema Diseases 0.000 description 1
- 206010015037 Epilepsy Diseases 0.000 description 1
- 229950003499 FIBRIN Drugs 0.000 description 1
- 229960000301 Factor VIII Drugs 0.000 description 1
- 108010054218 Factor VIII Proteins 0.000 description 1
- 102000001690 Factor VIII Human genes 0.000 description 1
- BWGVNKXGVNDBDI-UHFFFAOYSA-N Fibrin Chemical compound CNC(=O)CNC(=O)CN BWGVNKXGVNDBDI-UHFFFAOYSA-N 0.000 description 1
- 102000009123 Fibrin Human genes 0.000 description 1
- 108010073385 Fibrin Proteins 0.000 description 1
- 229940012952 Fibrinogen Drugs 0.000 description 1
- 108010049003 Fibrinogen Proteins 0.000 description 1
- 102000008946 Fibrinogen Human genes 0.000 description 1
- 229940019698 Fibrinogen containing hemostatics Drugs 0.000 description 1
- 239000004471 Glycine Substances 0.000 description 1
- 229940096919 Glycogen Drugs 0.000 description 1
- BYSGBSNPRWKUQH-UJDJLXLFSA-N Glycogen Chemical compound O[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1OC[C@@H]1[C@@H](O[C@@H]2[C@@H]([C@@H](O)[C@H](O)[C@@H](CO)O2)O)[C@H](O)[C@@H](O)[C@@H](O[C@@H]2[C@H](O[C@H](O)[C@H](O)[C@H]2O)CO)O1 BYSGBSNPRWKUQH-UJDJLXLFSA-N 0.000 description 1
- 229920002527 Glycogen Polymers 0.000 description 1
- 241000193159 Hathewaya histolytica Species 0.000 description 1
- 208000005252 Hepatitis A Diseases 0.000 description 1
- 241000709721 Hepatovirus A Species 0.000 description 1
- 241000282412 Homo Species 0.000 description 1
- 201000001971 Huntington's disease Diseases 0.000 description 1
- 206010020772 Hypertension Diseases 0.000 description 1
- 206010020993 Hypoglycaemia Diseases 0.000 description 1
- XUJNEKJLAYXESH-REOHCLBHSA-N L-cysteine Chemical compound SC[C@H](N)C(O)=O XUJNEKJLAYXESH-REOHCLBHSA-N 0.000 description 1
- KDXKERNSBIXSRK-YFKPBYRVSA-N L-lysine Chemical compound NCCCC[C@H](N)C(O)=O KDXKERNSBIXSRK-YFKPBYRVSA-N 0.000 description 1
- COLNVLDHVKWLRT-QMMMGPOBSA-N L-phenylalanine Chemical compound OC(=O)[C@@H](N)CC1=CC=CC=C1 COLNVLDHVKWLRT-QMMMGPOBSA-N 0.000 description 1
- GUBGYTABKSRVRQ-UUNJERMWSA-N Lactose Natural products O([C@@H]1[C@H](O)[C@H](O)[C@H](O)O[C@@H]1CO)[C@H]1[C@@H](O)[C@@H](O)[C@H](O)[C@H](CO)O1 GUBGYTABKSRVRQ-UUNJERMWSA-N 0.000 description 1
- 210000004072 Lung Anatomy 0.000 description 1
- 239000004472 Lysine Substances 0.000 description 1
- FEWJPZIEWOKRBE-XIXRPRMCSA-N Mesotartaric acid Chemical compound OC(=O)[C@@H](O)[C@@H](O)C(O)=O FEWJPZIEWOKRBE-XIXRPRMCSA-N 0.000 description 1
- 206010027476 Metastasis Diseases 0.000 description 1
- QARBMVPHQWIHKH-UHFFFAOYSA-N Methanesulfonyl chloride Chemical compound CS(Cl)(=O)=O QARBMVPHQWIHKH-UHFFFAOYSA-N 0.000 description 1
- 239000012359 Methanesulfonyl chloride Substances 0.000 description 1
- UAEPNZWRGJTJPN-UHFFFAOYSA-N Methylcyclohexane Chemical compound CC1CCCCC1 UAEPNZWRGJTJPN-UHFFFAOYSA-N 0.000 description 1
- 229940100662 Nasal Drops Drugs 0.000 description 1
- 206010028980 Neoplasm Diseases 0.000 description 1
- 210000000944 Nerve Tissue Anatomy 0.000 description 1
- 206010053643 Neurodegenerative disease Diseases 0.000 description 1
- 206010029350 Neurotoxicity Diseases 0.000 description 1
- 206010033645 Pancreatitis Diseases 0.000 description 1
- 206010061536 Parkinson's disease Diseases 0.000 description 1
- 229960005190 Phenylalanine Drugs 0.000 description 1
- 241000709664 Picornaviridae Species 0.000 description 1
- 241000223960 Plasmodium falciparum Species 0.000 description 1
- 241000223829 Plasmodium vinckei Species 0.000 description 1
- 239000002202 Polyethylene glycol Substances 0.000 description 1
- 206010040070 Septic shock Diseases 0.000 description 1
- CZDYPVPMEAXLPK-UHFFFAOYSA-N Tetramethylsilane Chemical compound C[Si](C)(C)C CZDYPVPMEAXLPK-UHFFFAOYSA-N 0.000 description 1
- 208000007536 Thrombosis Diseases 0.000 description 1
- 206010007867 Tissue disorder Diseases 0.000 description 1
- 206010044221 Toxic encephalopathy Diseases 0.000 description 1
- GSEJCLTVZPLZKY-UHFFFAOYSA-N Tris Chemical compound OCCN(CCO)CCO GSEJCLTVZPLZKY-UHFFFAOYSA-N 0.000 description 1
- 239000007983 Tris buffer Substances 0.000 description 1
- NBIIXXVUZAFLBC-UHFFFAOYSA-K [O-]P([O-])([O-])=O Chemical compound [O-]P([O-])([O-])=O NBIIXXVUZAFLBC-UHFFFAOYSA-K 0.000 description 1
- QTBSBXVTEAMEQO-UHFFFAOYSA-M acetate Chemical compound CC([O-])=O QTBSBXVTEAMEQO-UHFFFAOYSA-M 0.000 description 1
- 239000004480 active ingredient Substances 0.000 description 1
- 239000000443 aerosol Substances 0.000 description 1
- 229910052783 alkali metal Inorganic materials 0.000 description 1
- 229910052784 alkaline earth metal Inorganic materials 0.000 description 1
- 150000001370 alpha-amino acid derivatives Chemical class 0.000 description 1
- 235000008206 alpha-amino acids Nutrition 0.000 description 1
- XAGFODPZIPBFFR-UHFFFAOYSA-N aluminum Chemical class [Al] XAGFODPZIPBFFR-UHFFFAOYSA-N 0.000 description 1
- 125000003277 amino group Chemical group 0.000 description 1
- 230000006907 apoptotic process Effects 0.000 description 1
- 239000007864 aqueous solution Substances 0.000 description 1
- 239000012131 assay buffer Substances 0.000 description 1
- 201000001320 atherosclerosis Diseases 0.000 description 1
- 230000003376 axonal Effects 0.000 description 1
- 229920002988 biodegradable polymer Polymers 0.000 description 1
- 239000004621 biodegradable polymer Substances 0.000 description 1
- 230000023555 blood coagulation Effects 0.000 description 1
- 229910052794 bromium Inorganic materials 0.000 description 1
- 239000007853 buffer solution Substances 0.000 description 1
- OYPRJOBELJOOCE-UHFFFAOYSA-N calcium Chemical compound [Ca] OYPRJOBELJOOCE-UHFFFAOYSA-N 0.000 description 1
- 229910052791 calcium Inorganic materials 0.000 description 1
- 239000011575 calcium Substances 0.000 description 1
- 239000001110 calcium chloride Substances 0.000 description 1
- 235000011148 calcium chloride Nutrition 0.000 description 1
- 229910001628 calcium chloride Inorganic materials 0.000 description 1
- 159000000007 calcium salts Chemical class 0.000 description 1
- 239000002775 capsule Substances 0.000 description 1
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 description 1
- 230000015556 catabolic process Effects 0.000 description 1
- 230000003197 catalytic Effects 0.000 description 1
- 210000004027 cells Anatomy 0.000 description 1
- 229910052801 chlorine Inorganic materials 0.000 description 1
- 229920001577 copolymer Polymers 0.000 description 1
- 201000008739 coronary artery disease Diseases 0.000 description 1
- 125000006165 cyclic alkyl group Chemical group 0.000 description 1
- 125000001559 cyclopropyl group Chemical group [H]C1([H])C([H])([H])C1([H])* 0.000 description 1
- 235000018417 cysteine Nutrition 0.000 description 1
- 125000000151 cysteine group Chemical group N[C@@H](CS)C(=O)* 0.000 description 1
- 201000003883 cystic fibrosis Diseases 0.000 description 1
- 230000004059 degradation Effects 0.000 description 1
- 238000006731 degradation reaction Methods 0.000 description 1
- KXGVEGMKQFWNSR-LLQZFEROSA-M deoxycholate Chemical compound C([C@H]1CC2)[C@H](O)CC[C@]1(C)[C@@H]1[C@@H]2[C@@H]2CC[C@H]([C@@H](CCC([O-])=O)C)[C@@]2(C)[C@@H](O)C1 KXGVEGMKQFWNSR-LLQZFEROSA-M 0.000 description 1
- 238000010586 diagram Methods 0.000 description 1
- 239000006196 drop Substances 0.000 description 1
- KCXVZYZYPLLWCC-UHFFFAOYSA-N edta Chemical compound OC(=O)CN(CC(O)=O)CCN(CC(O)=O)CC(O)=O KCXVZYZYPLLWCC-UHFFFAOYSA-N 0.000 description 1
- 239000000839 emulsion Substances 0.000 description 1
- 230000002255 enzymatic Effects 0.000 description 1
- 125000001301 ethoxy group Chemical group [H]C([H])([H])C([H])([H])O* 0.000 description 1
- DEFVIWRASFVYLL-UHFFFAOYSA-N ethylene glycol bis(2-aminoethyl)tetraacetic acid Chemical compound OC(=O)CN(CC(O)=O)CCOCCOCCN(CC(O)=O)CC(O)=O DEFVIWRASFVYLL-UHFFFAOYSA-N 0.000 description 1
- 239000005038 ethylene vinyl acetate Substances 0.000 description 1
- 230000002461 excitatory amino acid Effects 0.000 description 1
- 239000003257 excitatory amino acid Substances 0.000 description 1
- 229910052731 fluorine Inorganic materials 0.000 description 1
- 238000005755 formation reaction Methods 0.000 description 1
- 238000009472 formulation Methods 0.000 description 1
- VZCYOOQTPOCHFL-UHFFFAOYSA-N fumaric acid Chemical compound OC(=O)C=CC(O)=O VZCYOOQTPOCHFL-UHFFFAOYSA-N 0.000 description 1
- 239000000499 gel Substances 0.000 description 1
- 239000003102 growth factor Substances 0.000 description 1
- 230000036541 health Effects 0.000 description 1
- 125000004404 heteroalkyl group Chemical group 0.000 description 1
- 150000001261 hydroxy acids Chemical class 0.000 description 1
- 125000002887 hydroxy group Chemical group [H]O* 0.000 description 1
- 230000002218 hypoglycaemic Effects 0.000 description 1
- 238000000338 in vitro Methods 0.000 description 1
- 230000002779 inactivation Effects 0.000 description 1
- 238000001802 infusion Methods 0.000 description 1
- 230000003834 intracellular Effects 0.000 description 1
- 229910052740 iodine Inorganic materials 0.000 description 1
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- GUBGYTABKSRVRQ-XLOQQCSPSA-N lactose Chemical compound O[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]1O[C@@H]1[C@@H](CO)O[C@H](O)[C@H](O)[C@H]1O GUBGYTABKSRVRQ-XLOQQCSPSA-N 0.000 description 1
- 239000008101 lactose Substances 0.000 description 1
- 230000000670 limiting Effects 0.000 description 1
- 239000002502 liposome Substances 0.000 description 1
- 239000006193 liquid solution Substances 0.000 description 1
- 239000006194 liquid suspension Substances 0.000 description 1
- 159000000003 magnesium salts Chemical class 0.000 description 1
- 201000004792 malaria Diseases 0.000 description 1
- VZCYOOQTPOCHFL-UPHRSURJSA-L maleate(2-) Chemical compound [O-]C(=O)\C=C/C([O-])=O VZCYOOQTPOCHFL-UPHRSURJSA-L 0.000 description 1
- 238000004519 manufacturing process Methods 0.000 description 1
- 238000001819 mass spectrum Methods 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 229910052751 metal Inorganic materials 0.000 description 1
- 239000002184 metal Substances 0.000 description 1
- 150000007522 mineralic acids Chemical class 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 238000006011 modification reaction Methods 0.000 description 1
- YNAVUWVOSKDBBP-UHFFFAOYSA-N morpholine Chemical compound C1COCCN1 YNAVUWVOSKDBBP-UHFFFAOYSA-N 0.000 description 1
- 229940113083 morpholine Drugs 0.000 description 1
- 150000002790 naphthalenes Chemical class 0.000 description 1
- 239000007923 nasal drop Substances 0.000 description 1
- 210000002569 neurons Anatomy 0.000 description 1
- 230000002887 neurotoxic Effects 0.000 description 1
- 231100000228 neurotoxicity Toxicity 0.000 description 1
- 230000001264 neutralization Effects 0.000 description 1
- 229910052757 nitrogen Inorganic materials 0.000 description 1
- 230000003000 nontoxic Effects 0.000 description 1
- 231100000252 nontoxic Toxicity 0.000 description 1
- 239000003921 oil Substances 0.000 description 1
- 150000007524 organic acids Chemical class 0.000 description 1
- 230000003204 osmotic Effects 0.000 description 1
- 201000008482 osteoarthritis Diseases 0.000 description 1
- 229910052760 oxygen Inorganic materials 0.000 description 1
- 244000045947 parasites Species 0.000 description 1
- 239000002245 particle Substances 0.000 description 1
- 230000001717 pathogenic Effects 0.000 description 1
- 244000052769 pathogens Species 0.000 description 1
- 230000001575 pathological Effects 0.000 description 1
- 125000005561 phenanthryl group Chemical group 0.000 description 1
- 239000010452 phosphate Substances 0.000 description 1
- NQRYJNQNLNOLGT-UHFFFAOYSA-N piperidine Chemical compound C1CCNCC1 NQRYJNQNLNOLGT-UHFFFAOYSA-N 0.000 description 1
- 229920001200 poly(ethylene-vinyl acetate) Polymers 0.000 description 1
- 229920001515 polyalkylene glycol Polymers 0.000 description 1
- 229920001223 polyethylene glycol Polymers 0.000 description 1
- 229920002503 polyoxyethylene-polyoxypropylene Polymers 0.000 description 1
- 159000000001 potassium salts Chemical class 0.000 description 1
- 239000000843 powder Substances 0.000 description 1
- 238000002360 preparation method Methods 0.000 description 1
- 102000004196 processed proteins & peptides Human genes 0.000 description 1
- 108090000765 processed proteins & peptides Proteins 0.000 description 1
- 230000001681 protective Effects 0.000 description 1
- 238000000425 proton nuclear magnetic resonance spectrum Methods 0.000 description 1
- 125000001725 pyrenyl group Chemical group 0.000 description 1
- 230000008929 regeneration Effects 0.000 description 1
- 238000011069 regeneration method Methods 0.000 description 1
- YGSDEFSMJLZEOE-UHFFFAOYSA-M salicylate Chemical compound OC1=CC=CC=C1C([O-])=O YGSDEFSMJLZEOE-UHFFFAOYSA-M 0.000 description 1
- 229960001860 salicylate Drugs 0.000 description 1
- 230000036303 septic shock Effects 0.000 description 1
- 125000003616 serine group Chemical group [H]N([H])[C@]([H])(C(=O)[*])C(O[H])([H])[H] 0.000 description 1
- 159000000000 sodium salts Chemical class 0.000 description 1
- 239000008223 sterile water Substances 0.000 description 1
- QAOWNCQODCNURD-UHFFFAOYSA-L sulfate Chemical compound [O-]S([O-])(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-L 0.000 description 1
- 229910052717 sulfur Inorganic materials 0.000 description 1
- 230000004083 survival Effects 0.000 description 1
- 239000000725 suspension Substances 0.000 description 1
- 230000002194 synthesizing Effects 0.000 description 1
- 229940095064 tartrate Drugs 0.000 description 1
- QEMXHQIAXOOASZ-UHFFFAOYSA-N tetramethylammonium Chemical class C[N+](C)(C)C QEMXHQIAXOOASZ-UHFFFAOYSA-N 0.000 description 1
- 125000004149 thio group Chemical group *S* 0.000 description 1
- 201000005060 thrombophlebitis Diseases 0.000 description 1
- 125000003944 tolyl group Chemical group 0.000 description 1
- 235000013311 vegetables Nutrition 0.000 description 1
- 239000003981 vehicle Substances 0.000 description 1
- 230000003612 virological Effects 0.000 description 1
- 125000005023 xylyl group Chemical group 0.000 description 1
- 150000003751 zinc Chemical class 0.000 description 1
Abstract
The present invention is directed to hydroxamate-containing inhibitors of cysteine and serine proteases. Methods for the use of the protease inhibitors are also described.
Description
INHIBITORS OF SERINE AND CYSTEINE PROTEASE CONTAINING HYDROXAMATE
CROSS REFERENCE WITH RELATED APPLICATIONS This patent application claims the priority benefit of the Provisional Application of E.U. Series No. 60/101, 414, filed on September 22, 1998, the description of which is incorporated herein by reference in its entirety.
FIELD OF THE INVENTION The present invention is directed to inhibitors of novel cysteine or serine proteases, referred to herein as hydroxamates. The present invention is also directed to methods for making these novel compounds, and methods for using same.
BACKGROUND OF THE INVENTION Numerous proteases of cysteine and serine have been identified in human tissues. A "protease" is an enzyme that breaks down proteins into smaller components (peptides). The terms "cysteine protease" and "serine protease" refer to proteases that are distinguished by the presence therein of a cysteine or serine residue that plays a critical role in the catalytic process. Mammalian systems, including humans, normally degrade and process proteins through a variety of enzymes that include cysteine and serine proteases. However, when they occur at high levels or when they are activated abnormally, the cysteine and serine proteases can be included in pathophysiogenic processes. For example, activated neutral calcium proteases ("calpains") comprise a family of intracellular cysteine proteases that are ubiquitously expressed in mammalian tissues. Two main calpains have been identified; Calpain I and Calpain II. Although calpain II is the predominant form in several tissues, it is thought that calpain I is the predominant form in the pathological conditions of nerve tissues. The calpain family of cysteine proteases has been implicated in several diseases and disorders, including neurodegeneration, apoplexy, Alzheimer's, amyotrophy, motor neuron damage, acute central nervous system injury, muscular dystrophy, bone resorption, thrombocyte agglomeration, cataracts and inflammation. Calpain I has been implicated in the excitatory amino acid induced neurotoxicity disorders that include ischemia, hypoglycemia, Huntington's disease, and epilepsy. Cathepsin B of lysosomal cysteine protease has been implicated in the following disorders: arthritis, inflammation, myocardial infarction, tumor metastasis, and muscular dystrophy. Other lysosomal cysteine proteases include cathepsins C, H, L and S. The conversion enzyme of interleukin-1β ("ICE") is a cysteine protease that catalyzes the formation of interleukin-1β. Interleukin-1β is a nanoregulatory protein involved in the following disorders: inflammation, diabetes, septic shock, rheumatoid arthritis, and Alzheimer's disease. ICE has also been linked to apoptotic cell death of neurons, which is implicated in a variety of neurodegenerative disorders including Parkinson's disease, ischemia, and amyotrophic lateral sclerosis (ALS). Cysteine proteases are also produced by several pathogens. Cysteine protease clostripain is produced by Clostridium histolyticum. Other proteases are produced by Tripanosoma cruzi "malaria parasites Plasmodium falciparum and P. vinckei and Streptocococcus. The HAV C3 viral protease of Hepatitis A is a cysteine protease essential for the processing of proteins and structural enzymes of picornavirus. Exemplary serine proteases involved in degenerative disorders include thrombin, human leukocyte elastase, pancreatic elastase, chymase and cathepsin G. Specifically, thrombin is produced in the blood coagulation cascade, opens the way for fibrinogen to form fibrin and activates the Factor VIII; Thrombin is involved in thrombophlebitis, thrombosis and asthma. Human leukocyte elastase is involved in degenerative tissue disorders such as rheumatoid arthritis, osteoarthritis, atherosclerosis, bronchitis, cystic fibrosis, and emphysema. Pancreatic elastase is involved in pancreatitis. Qutmase, an important enzyme in the synthesis of angiotensin, is involved in hypertension, myocardial infarction, and coronary heart disease. Cathepsin G is involved in the degradation of abnormal connective tissue, particularly in the lung. Hydroxamates that are structurally distinct from the compounds described herein have been described as inhibitors of glycogen phosphoryliase (International Patent Application Pub. No. WO 96/39385) and thrombin (U.S. Patent 5,563, 127). Given the binding between cysteine and serine proteases and various impairment disorders, compounds that inhibit these proteases would be useful and would provide an advance in both clinical and research medicine. The present invention addresses these, as well as others, important purposes.
BRIEF DESCRIPTION OF THE INVENTION The present invention is directed to novel cysteine and serine protease inhibitors referred to herein as hydroxamates. In the preferred embodiments, the novel compounds are represented by the following Formula I:
I where: W is A-B-D; A is aryl (CH2) n, heteroaryl (CH2) n, alkyl having from one to about 14 carbons, alkenyl having from two to about 14 carbons, cycloalkyl having from 3 to about 10 carbons, said group A being optionally substituted with one or more groups J; B is a bond or CO, SO, SO2, OCO, NR5CO, NR5SO2 or NR5SO;
D is a bond, an amino acid residue, or a peptide composed of 2 to about 5 amino acid residues, said amino acid residue (s) are independently defined by the formula -NH-** CH (Rβ ) -CO-, in which ** indicate the possession of a carbon of an a-amino acid residue, where R6 is different from hydrogen, configuration D, configuration L, or a mixture of D- and L-; n is an integer from 0 to about 6; R1, R2, R3, R4, R5, and R6 are, independently, hydrogen, alkyl having from one to about 14 carbons, cycloalkyl having from 3 to about 10 carbons, said alkyl and cycloalkyl groups being optionally substituted with one or more groups J; and J is halogen, lower alkyl, aryl, heteroaryl, haloaryl, amino optionally substituted with one to three aryl or lower alkyl groups, guanidino, alkoxycarbonyl, amido, lower alkylamido, sulfonamido, lower alkyl sulfonamido, lower alkylsulfonyl, lower alkylsulfoxy, alkylthio lower, lower alkoxy, aryloxy, arylalkyloxy, hydroxy, carboxy, cyano, or nitro; and * denotes the possession of a carbon of an a-amino acid residue, where R2 is different from hydrogen, the D configuration, the L configuration, or a mixture of the D- and L- configurations. In some preferred embodiments, R1 is alkyl or alkyl substituted with J, wherein J is a lower alkoxy. In the most preferred embodiments, R 1 is benzyl, methoxymethyl, or butyl. In further preferred embodiments, R is alkyl or alkyl substituted with J where J is arylalkyloxy or aryl. In more preferred embodiments, R 2 is isobutyl or benzyloxymethyl. In further preferred embodiments, R3 is H. In some preferred embodiments, R4 is alkyl, J-substituted alkyl, cycloalkyl or cycloalkio substituted with J wherein J is aryl, haloaryl, alkyl or heteroaryl. More preferably, R 4 is methyl, ethyl, propyl, butyl, benzyl, (pentafluorophenyl) methyl, tert-butyl or 4-methylcyclohexyl. In some preferred embodiments, W is benzyloxycarbonyl, methanesulfonyl, benzoyl, tert-butoxycarbonyl, or benzyloxycarbonyl-leucyl. In some preferred embodiments, R3 is H, and R1 is alkyl or alkyl substituted with J, where J is lower alkoxy. In further preferred embodiments, R3 is H, and R2 is alkyl or alkyl substituted with J wherein J is arylalkyloxy or aryl. Still in more preferred embodiments, R3 is H, and R4 is alkyl, J-substituted alkyl, cycloalkyl, or cycloalkyl substituted with J wherein J is aryl, alkyl, haloaryl, or heteroaryl. Still in more preferred embodiments, R3 is H, R1 is alkyl or J-substituted alkyl, wherein J is lower alkoxy, and R2 is alkyl or J-substituted alkyl wherein J is arylalkyloxy or aryl. Still in more preferred embodiments, R3 is H, R1 is alkyl or J-substituted alkyl, wherein J is lower alkoxy, and R4 is alkyl, J-substituted alkyl, cycloalkyl, or cycloalkyl substituted with J wherein J is aryl, haloaryl , alkyl or heteroaryl.
Still in more preferred embodiments, R3 is H, R1 is alkyl or J-substituted alkyl, wherein J is lower alkoxy, and R4 is alkyl, J-substituted alkyl, cycloalkyl, or cycloalkyl substituted with J wherein J is aryl, haloaryl , alkyl or heteroaryl, and R2 is alkyl or alkyl substituted with J wherein J is arylalkyloxy or aryl. In some particularly preferred embodiments, R 1 is benzyl, methoxymethyl, or butyl; R2 is isobutyl or benzyloxymethyl; R3 is hydrogen; R 4 is methyl, ethyl, propyl, butyl, benzyl, (pentafluorophenyl) methyl, tert-butyl, or 4-methylcyclohexyl; and W is benzyloxycarbonyl, methanesulfonyl, benzoyl, tert-butoxycarbonyl, or benzyloxycarbonyl-leucyl. In particularly preferred further embodiments, R1 is benzyl; R2 is isobutyl; * indicates the carbon of an a-amino acid residue that has the L- configuration; R3 is hydrogen, R4 is methyl, ethyl, propyl, butyl, benzyl, (pentafluorophenyl) methyl, tert-butyl, or 4-methylcyclohexyl; Y
W is benzyloxycarbonyl or benzyloxycarbonyl-leucyl. In particularly preferred further embodiments, R1 is benzyl; R2 is benzyloxymethyl; * indicates the carbon of an a-amino acid residue having the D- configuration; R3 is hydrogen; R 4 is methyl, ethyl, or benzyl; and W is methanesulfonyl. Some especially preferred embodiments of the invention are described in Table 1, infra. The present invention also provides compositions for inhibiting a protease selected from the group consisting of serine proteases and cysteine proteases comprising a compound of the invention. Also provided by the present invention are methods for inhibiting a protease comprising contacting a protease selected from the group consisting of serine proteases and cysteine proteases with an inhibitory amount of a compound of the invention, and methods for inhibiting a protease that it comprises contacting a protease selected from the group consisting of serine proteases and cysteine proteases with an inhibitory amount of a composition comprising a compound of the invention. The compounds of the invention are useful for the inhibition of cysteine and serine proteases. Beneficially, these compounds find utility in a variety of approaches. For example, in the field of research, the claimed compounds may be used, for example, in the discovery of agents to treat disorders associated with abnormal and / or aberrant activity of cysteine and / or serine proteases. In a clinical field, for example, the compounds can be used to alleviate, mediate, reduce, and / or prevent the disorders with which they are associated in the abnormal and / or aberrant activity of cysteine and / or serine proteases. Thus, in some preferred embodiments, the present invention further provides pharmaceutical compositions comprising a compound of the invention, preferably also containing a pharmaceutically acceptable carrier. Also provided according to the present invention are compositions for the treatment of a disorder, which is preferably neurodegeneration, stroke, Alzheimer's, amyotrophy, motor neuron damage, acute central nervous system injury, muscular dystrophy, bone resorption, agglomeration of thrombocytes, cataracts and inflammation, comprising a compound of claim 1 and a pharmaceutically acceptable carrier. The present invention also provides methods for the treatment of a disorder, which is preferably neurodegeneration, stroke, Alzheimer's, amyotrophy, motor neuron damage, acute central nervous system injury, muscular dystrophy, bone resorption, thrombocyte agglomeration, cataracts and inflammation, which comprises administering to a subject in need of such treatment an effective amount of a compound of the invention. Because the hydroxamates of the invention inhibit cysteine proteases and serine proteases, they can be used in both research and therapeutic approaches. These and other characteristics of the subject compounds of the invention are set forth in more detail below.
DETAILED DESCRIPTION The present invention provides novel inhibitors of cysteine and serine protease inhibitors. In preferred embodiments, the compounds of the invention have Formula I: wherein: W is A-B-D; A is aryl (CH2) n, heteroaryl (CH2) n, alkyl having from one to about 14 carbons, alkenyl having from two to about 14 carbons, cycloalkyl having from 3 to about 10 carbon, said group A being substituted optionally with one or more groups J; B is a bond or CO, SO, SO2, OCO, NR5CO, NR5SO2 or
NR5SO; D is a bond, an amino acid residue, or a peptide composed of 2 to about 5 amino acid residues, said amino acid residue (s) are independently defined by the formula -NH-** CH (R6 ) -CO-, in which the ** indicate the possession of a carbon of an a-amino acid residue, where R6 is different from hydrogen, the one with figuration D, the configuration L, or a mixture of D- and L-; n is an integer from 0 to about 6; R1, R2, R3, R4, R5, and R6 are, independently, hydrogen, alkyl having from one to about 14 carbons, cycloalkyl having from 3 to about 10 carbon, said alkyl and cycloalkyl groups are optionally substituted with one or more groups J; and J is halogen, lower alkyl, aryl, heteroaryl, haloaryl, amino optionally substituted with one to three aryl or lower alkyl groups, guanidino, alkoxycarbonyl, amido, lower aicylamido, sulfonamido, lower alkyl sulfonamido, lower alkylsulfonyl, lower alkylsulfoxy, alkylthio lower, lower alkoxy, aryloxy, arylalkyloxy, hydroxy, carboxy, cyano, or nitro; and * denotes the possession of a carbon of an a-amino acid residue, where R2 is different from hydrogen, the D configuration, the L configuration, or a mixture of the D- and L- configurations. The compounds of the invention are useful in a variety of approaches. For example, in a research environment, preferred compounds having defined attributes can be used to select natural and synthetic compounds that exhibit similar characteristics in inhibitory protease activity. Inhibition of cysteine protease or serine protease activity can be measured by determining the rate of inactivation of a protease using a compound of the invention. The compounds can also be used in the refinement of in vitro and in vivo models to determine the effects of the inhibition of particular proteases on particular cell types or biological conditions. In a therapeutic approach, given the connection between cysteine proteases and certain defined disorders, and serine proteases and certain defined disorders, the compounds of the invention can be used to alleviate, mediate, reduce and / or prevent the disorders that are associated with abnormal and / or aberrant activity of cysteine proteases and / or serine proteases.
As used herein, the term "alkyl" means that it includes straight, branched chain and cyclic hydrocarbon groups such as, for example, ethyl and isopropyl groups. Preferred alkyl groups have from 1 to about 10 carbon atoms. The term "lower alkyl" refers to alkyl groups of 1-6 carbon atoms. In general, the term "lower" refers to groups having above six carbon atoms. The term "cycloalkyl" denotes cyclic alkyl groups, such as, for example, cyclopropyl groups. The term "alkenyl" denotes alkyl groups containing at least one double bond. The "aryl" groups are aromatic cyclic compounds including but not limited to phenyl, tolyl, naphthyl, anthracyl, phenanthryl, pyrenyl, and xylyl. Preferred aryl groups include phenyl and naphthyl. In general, the term "hetero" when used as a prefix indicates the presence of one or more straight atoms such as O, N or S. In this manner, the term "heterocyclic" refers to cyclic groups in which the ring portion includes at least one heteroatom. The "heteroalkyl" groups are heterocycles that contain only individual bonds within the ring portions, ie, saturated heteroatomic ring systems. The term "heteroaryl" denotes the aryl groups where at least one ring carbon has been replaced with a hetero atom. The term "haloaryl" is meant to mean that an aryl group carries one or more halogen atoms. The term "halogen" refers to atoms F, Cl, Br, and I. As used herein, "alkoxy" groups are alkyl groups attached through an oxygen atom. Examples of alkoxy groups include methoxy (-OCH3) and ethoxy (-OCH2CH3) groups. In general, the term "oxy" when used as a suffix indicates the union through the oxygen atom. Thus, the alkoxycarbonyl groups are carbonyl groups containing an alkoxy substitute, ie, groups of the general formula -C (= O) -O-R, where R is alkyl. The term "aryloxy" denotes an aryl group linked through an oxygen atom. The term "arylalkyl" (or "aralkyl") denotes an alkyl group containing an aryl substitute. The term "arylalkyloxy" (or "aralkyloxy") denotes an aralkyl group attached through an oxygen atom. As used herein, the term "amino acid" denotes a molecule or residue thereof that contains both an amino group and a carboxyl group. As used herein, the term "α-amino acid" means an amino acid of the general formula HOOC-CH (side chain) -NH 2, or a residue of such an amino acid of the formula, eg, -C (= O) -CH (side chain) -NH-. In the preferred embodiments of the compounds of the invention, the a-carbon (i.e. the carbon carrying the side chain) of the constituent amino acids can be exclusively in the L-configuration, exclusively in the D-configuration, or in a mixture of the D and L configurations in any proportion. The functional groups present in the compounds of Formula I may contain protecting groups. For example, amino acid side chain substitutes of the compounds of Formula 1 can be substituted with protecting groups such as benzyloxycarbonyl or f-butoxycarbonyl groups. The protection groups are known per se as chemical functional groups that can be selectively appended and removed from the functionalities, such as hydroxyl groups and carboxyl groups. These groups are presented in a chemical compound to render such functionality inert to the chemical reaction conditions to which the compound is exposed. Any of a variety of protection groups can be employed with the present invention. One such protection group is the benzyloxycarbonyl group (Cbz; Z). Other preferred protection groups according to the invention can be found in Greene, T.W. and Wuts, P.G.M., "Protective Groups in Organic Synthesis" 2d. Ed., Wiley & amp; Sons, 1991. As used herein, the term "amido" has its usual meaning as a group of the formula -C (= O) -NH-. The term "alkylamido" denotes an amido group that contains an alkyl substitute. The term "sulfonamido" denotes a group of the formula -SO2-NH-. In general, the term "alkyl" or "aryl" when used as a prefix in such terms as "alkylsulfonamido", "alkylsulfonyl", "alkylsulfoxy" or "alkylthio" indicates that the sulfonamido, sulfonyl, sulfoxy or thio group contains a substitute for alkyl. Some constituent groups represented in the formulas described herein may be substituted. As used herein, the term "substituted" indicates that any available hydrogen atom of the element designated "substituted" may be replaced by the indicated group. In preferred embodiments, the compositions are provided to inhibit a serine protease or a cysteine protease comprising a compound of the invention. In other preferred embodiments, the methods are provided to inhibit serine proteases or cysteine proteases comprising contacting a protease selected from the group consisting of serine proteases and cysteine proteases with an inhibitory amount of a compound of the invention. The described compounds of the invention are useful for the inhibition of cysteine proteases and serine proteases. As used herein, the terms "inhibit" and "inhibition" mean that they have an opposite effect on enzymatic activity. An "inhibitory amount" is an amount of a compound of the invention effective to inhibit a cysteine and / or serine protease. The pharmaceutically acceptable salts of the cysteine and serine protease inhibitors also fall within the scope of the compounds as described herein. The term "pharmaceutically acceptable salts" as used herein means an inorganic acid addition salt such as hydrochloride, sulfate, and phosphate, or an organic acid addition salt such as acetate, maleate, fumarate, tartrate, and citrate . Examples of pharmaceutically acceptable metal salts are alkali metal salts such as sodium salt and potassium salt, alkaline earth metal salts such as magnesium salt and calcium salt, aluminum salt, and zinc salt. Examples of pharmaceutically acceptable ammonium salts are ammonium salt and tetramethylammonium salt. Examples of pharmaceutically acceptable organic amine addition salts are salts with morpholine and piperidine. Examples of pharmaceutically acceptable amino acid addition salts are salts with lysine, glycine, and phenylalanine. The compounds provided herein can be formulated in pharmaceutical compositions by a mixture with pharmaceutically acceptable non-toxic excipients and vehicles. As noted above, such compositions can be prepared for use in parenteral administration, particularly in the form of liquid solutions or suspensions; or oral administration, particularly in the form of tablets or capsules; or intranasally, particularly in the form of powders, nasal drops, or aerosols; or dermally, by means, for example, transdermal patches; or prepare in other suitable ways for these and other forms of administration that will be apparent to those skilled in the art. The composition can be conveniently administered in unit dose form and can be prepared by any of the methods known in the pharmaceutical art, for example, as described in Remington's Pharmaceutical Sciences (Mack Pub. Co., Easton, PA, 1980) . Formulations for parenteral administration may contain as common excipients sterile water or saline, polyalkylene glycols such as polyethylene glycol, oils and of vegetable origin, hydrogenated naphthalenes and the like. In particular, the biocompatible, biodegradable polymers of lactide, lactide / glycolide copolymer, or polyoxyethylene-polyoxypropylene copolymers may be useful excipients to control the release of the active compounds. Other potentially useful parenteral delivery systems for these active compounds include ethylene-vinyl acetate copolymer particles, osmotic pumps, implantable infusion systems, and liposomes. Formulations for the administration of inhalation contain as excipients, for example, lactose, or they can be aqueous solutions containing, for example, polyoxyethylene-9-lauryl ether, glycocholate and deoxycholate, or oily solutions for administration in the form of drops nasal, or as a gel to be applied intranasally. Formulations for parenteral administration may also include glycocholate for buccal administration, a salicylate for rectal administration, or citric acid for vaginal administration. The formulations for the transdermal patches are preferably lipophilic emulsions. The materials of this invention can be used as the sole active agent in a pharmaceutical or can be used in combination with other active ingredients, for example, other growth factors that could facilitate axonal regeneration or survival in diseases or disorders. The concentrations of the compounds described herein in a therapeutic composition will vary depending on a number of factors, including the dose of the drug to be administered, the chemical characteristics (e.g., hydrophobicity) of the compounds employed, and the route of administration. In general terms, the compounds of this invention can be provided in effective inhibitory amounts in an aqueous physiological buffer solution containing about 0.1 to 10% w / w of the compound for parenteral administration. Typical dose ranges are from about 1 mg / kg to about 1 g / kg of body weight per day; a preferred dose range is from about 0.01 mg / kg to about 1 g / kg of body weight per day; a preferred dose range is from about 0.01 mg / kg to 100 mg / kg of body weight per day. Such formulations typically provide inhibitory amounts of the compound of the invention. However, the preferred dose of the drug to be administered probably depends on variables such as the type and degree of progress of the disease or disorder, the overall health of the patient in particular, the relative biological efficacy of the selected compound, and the formulation of the excipient of the compound, and its route of administration. As used herein, the term "contact" means to originate directly or indirectly that at least two elements are physically associated with each other. Contacting in this way includes physical acts such as placing the items together in a container, or administering the items to a patient. Thus, for example, the administration of a compound of the invention to a human patient evidencing a disease or disorder associated with the abnormal and / or aberrant activity of such proteases falls within the scope of the definition of the term "contact". The invention is further illustrated by way of the following examples which are intended to clarify the invention. These examples do not pretend, nor are they interpreted, as limiting the scope of the description.
Examples General Methods: Thin layer chromatography was performed using sheets coated with silica gel (MK6F 60A, 1 x 3 inches in size, 250 μm layer thickness, Whatman Inc.). Preparative thin layer chromatography was performed using sheets coated with silica gel (20 x 20 cm in size, 1000 micron layer thickness, Analtech). The chromatography of the preparative column was carried out using Merck silica gel, 40-63 um, 230-400 sieve. The 1H NMR spectrum was recorded on the 300 MHz GE QE300 Plus spectrometer using tetramethylsilane as the internal standard. The electro-mass mass spectrum was recorded in the VG instrument of platform II (Fisons instruments). Examples 1-15 were prepared following General Method A or B.
General Method A
2 R? = - CHp33 - 1a R2 = L-CH2CH (CH3) 2 3 R7 = H + J W = CßH5CH2OCO BOP, HOBt H2 OR4
4a R ^ = CH3
Dess-Martin
5a Ri = CH2C6H5; R2 = L-CH2CH (CH3) 2 W = C6H5CH2OCO; R * = CH3
to R1 = CH2C6H5; Rs = tBOC; Re = H ~ Ri = CH2C6H5; R5 = H HCl; R6 = CH3 ^ General Method B
6b Ri = CH2OCH3 8 R4 = CH2OC6H5; Rs = tBOC 9 R4 = CH2OC6H5; R5 = H HCI
EDCI, HOBt, NM 1b
b Rz = D-CH2OCH2C6H5 W = CH3SO2 Dess-Martin
5b Ri = CH2OCH3; R2 = D-CH2OCH2C6H5 W = CH3SO2; R "= CH2C6H5
Compounds 6a, 6b and related hydroxy acids were synthesized following a general procedure of Harbeson et al. , J. Med. Chem. 1994, 37, 2918-2929.
Example 1 Cbz-Leu-Phe-CONHOCHs (General Method A).
Compound 5a To a cooled (0 ° C) solution of compound 6a (500 mg, 1.69 mmol) in anhydrous methanol (25 ml) was added thionyl chloride (0.37 ml, 5.08 mmol). The mixture was then stirred at room temperature for 16 hours and concentrated under reduced pressure. Trituration with ethyl ether gave compound 7 which was dried and used directly in the next step. White solid; 1 H NMR (DMSO-d6) d 8.49 (br, 1 H), 8.15 (br, 2 H), 7.22 (m, 1 0 H), 6.52 (dd, 1 H), 4.35 (ddd, 1 H), 3.80 ( ddd, 1 H), 3.28 (d, 3H), 3.08 (dd, 1 H), 2.80 (dd, 1 H). MS m / e 210 (M + H). To a solution of compound 1 to (450 mg, 1.69 mmol) in anhydrous DMF (5 mL) was added 1-HOBt (229 mg, 1.69 mmol), BOP (899 mg, 2.03 mmol), and N-methylmorpholine (0.74 ml, 6.78 mmol). After 5 min. , compound 7 (416 mg, 1.69 mmol) dissolved in 5 ml of DMF was added. Stirring was continued 90 min at room temperature. The mixture was poured into water (50 ml) and extracted into ethyl acetate (3 x 20 ml). The organic layer was washed with 3% citric acid solution (10 ml), saturated sodium bicarbonate solution (10 ml), and saline (10 ml). The solution was dried over MgSO, filtered and concentrated under reduced pressure to obtain 700 mg of crude product. Chromatography of the preparative column (1-5% MeOH / methylene chloride) achieved 533 mg of compound 2 (69%). White amorphous solid; 1 H NMR (DMSO-d6) d 8.2 (d, 2H), 8.0 (m, 2H), 7.0 (s, 3H). MS m / e 457 (M + H). To a cooled (0 ° C) solution of compound 2 (533 mg, 1.17 mmol) in methanol (10 mL) was slowly added a solution of 1 N NaOH (2.92 mL, 2.92 mmol). The mixture was then stirred at room temperature for 90 minutes and concentrated under reduced pressure. Water (30 ml) was added and the mixture was extracted with diethyl ether (30 ml). The aqueous portion was acidified to pH = 4 with solid citric acid and extracted with ethyl acetate (3 x 20 mL). The solution was dried over MgSO, filtered and concentrated under reduced pressure to obtain 439 mg of compound 3 (85%). No further purification was necessary. White amorphous solid; 1 H NMR (DMSO-d6) d 7.73 (dd, 1 H), 7.31 (m, 10H), 5.07 (s, 2H), 4.17 (m, 1 H), 4.04 (m, 2H), 3.41 (m, 1 H), 2.88 (m, 1 H), 2.74 (m, 2H), 1.58 (m, 1 H), 1.33 (m, 2H), 0.85 (m, 6H). MS m / e 441 (M-H). To a solution of compound 3 (1 25 mg, 0.283 mmol) in anhydrous DMF (5 mL) was added 1-HOBt (38 mg, 0.283 mmol), BOP (150 mg, 0.339 mmol), and N-methylmorpholine (0.1 09 ml, 0.99 mmol). After 5 min H2NOMe HCl (27 mg, 0.283 mmol) dissolved in 5 ml of DMF was added. Stirring was continued 90 min at room temperature. The mixture was poured into water (50 ml) and extracted into ethyl acetate (3 x 20 ml). The organic layers were washed with 3% citric acid solution (10 ml), saturated sodium bicarbonate solution (10 ml), and saline (10 ml). The solution was dried over MgSO 4, filtered and concentrated under reduced pressure to obtain 10 mg of crude product. Chromatography with preparative thin layer films (5% MeOH / methylene chloride) achieved 79 mg of compound 4a (59%). White amorphous solid; MS m / e 472 (M + H). To a refrigerated (0 ° C) solution of compound 4a (79 mg, 0.168 mmol) in anhydrous methylene chloride (10 ml) was added slowly a Dess-Martin periodinane reagent (71 mg, 0.168 mmol). The cooling bath was removed and the mixture was stirred for an additional 90 minutes. The mixture was then washed with 1 0% sodium thiosulfate solution (2 x 10 ml), saturated sodium bicarbonate solution (5 ml), and saline (5 ml). The solution was dried in MgSO, filtered and concentrated under reduced pressure to obtain 60 mg of compound 5a (76%). White amorphous solid; 1 H NMR (CDCl 3) d 9.55 (br s, 1 H), 7.20 (m, 10 H), 6.82 (d, 1 H), 5.40 (m, 1 H), 5.03 (s, 2 H), 4.95 (br s) , 1 H), 4.14 (m, 1 H), 3.81 (s, 3H), 3.24 (dd, 1 H), 2.96 (dd, 1 H), 1.52 (m, 2H), 1 .39 (m , 1 H), 0.83 (m, 6H). MS m / e 470 (M + H).
Example 2 Cbz-Leu-Phe-CONHOEt.
This compound was prepared by the General Method A of the commercially available H2NOEt-HCI. 1 H NMR (DMSO-d 6) d 8.38 (d, 1 H), 7.25 (m, 10 H), 5.13 (m, 1 H), 5.03 (s, 2 H), 4.09 (m, 1 H), 3.83 (q, 2 H), 3.11 (dd, 1H), 2.87 (dd, 1H), 1.59 (m, 1H), 1.38 (m, 2H), 1.18 (t, 3H), 0.86 (m, 6H). MS m / e 484 (M + H). Example 3 Cbz-Leu-Phe-CONHOBn.
This compound was prepared by the General Method A of the commercially available H2NOBn-HCI. 1 H NMR (CDCl 3) d 9.39 (br s, 1 H), 7.25 (m, 15 H), 6.82 (d, 1 H), 5.45 (m, 1 H), 5.08 (s, 2 H), 5.03 (br, 1 H), 4.99 (dd, 2H), 4.18 (m, 1H), 3.32 (dd, 1H), 3.07 (dd, 1H), 1.86 (m, 2H), 1 44 (m, 1H), 0.85 (m, 6H). MS m / e 546 (M + H). Example 4 Cbz-Leu-Phe-CONHOCH2C6F5
This compound was prepared by the General Method A of commercially available H2NOCH2C6F5-HCI. 1 H NMR (CDCl 3) d 9.76 (br s, 1 H), 7.23 (m, 10 H), 6.74 (d, 1 H), 5.42 (br, 1 H), 5.42 (m, 1 H), 5.08 (m, 4 H), 4.18 (m, 1H), 3.24 (dd, 1H), 2.95 (dd, 1H), 1.60 (m, 2H), 1.42 (m, 1H), 0.82 (m, 6H). MS m / e 636 (M + H). Example 5 Cbz-Leu-Phe-CONHOtBu.
This compound was prepared by the General Method A of the commercially available H2NOtBu-HCI. 1 H NMR (CDCl 3) d 8.88 (br s, 1 H), 7.25 (m, 10 H), 6.62 (m, 1 H), 5.42 (m, 1 H), 5.08 (s, 2 H), 4.18 (m, 1 H), 3.35 (dd, 1H), 3.10 (dd, 1H), 1.60 (m, 3H), 1.38 (s, 9H), 0.85 (m, 6H). MS m / e 512 (M + H). Additional O-substituted hydroxylamines were prepared using the procedure of Mavunkel er al. Eur. J. Med. Chem. 1994, 29, 659-666. Example 6 Cbz-Leu-Phe-CONHO (4-methylcyclohexane)
This compound was prepared by the General Method A of [(4-methylcyclohexyl) oxy] amine. 1 H NMR (CDCl 3) d 9.54 (d, 1 H), 7.25 (m, 10 H), 6.84 (m, 1 H), 5.44 (m, 1 H), 5.22 (m, 1 H), 5.08 (dd, 2 H), 4.18 ( m, 2H), 3.30 (m, 1H), 3.00 (m, 1H), 2.04 (m, 2H), 1.42 (m, 9H), 0.80 (m, 9H). MS m / e 552 (M + H).
Example 7 CH3S02-D-Ser (Bn) -Ser (e) -CONHOBn (General Method B).
Compound 5b To a suspension of D-Ser (Bn) (2.0 g, 10.3 mmol) in water (10 mL) was added a 1 N solution of NaOH (20 mL). After the solids had dissolved, methanesulfonyl chloride (1.19 ml, 15.5 mmol) was slowly added. An additional 1 N NaOH (5 mL) was added to adjust the pH = 10. The mixture was stirred 16 hours at room temperature, and was thus acidified to pH = 2 with concentrated HCl solution. The mixture was extracted into ethyl acetate (3 x 50 mL) and washed with saline (30 mL). The mixture was dried over MgSO, filtered and concentrated under reduced pressure to obtain 1.9 g (68%) of compound 1b as a white solid. No further purification was necessary. White amorphous solid; 1 H NMR (CDCl 3) d 7.26 (m, 5H), 5.30 (d, 1 H), 4.55 (s, 2H), 4.37 (m, 1 H), 3.95 (dd, 1 H), 3.75 (dd, 1 H), 3.00 (s, 3H). MS m / e 272 (M-H). To a solution of compound 6b (185 mg, 0.743 mmol) in anhydrous DMF (5 mL) was added 1-HOBt (100 mg, 0.743 mmol), BOP (394 mg, 0.892 mmol), and N-methylmorpholine (0.285 mmol). mi, 2.60 mmol). After 5 min. , H2NOBn-HCl (1 19 mg, 0.743 mmol) dissolved in 5 ml of DMF was added. Stirring was continued 90 minutes at room temperature. The mixture was poured into water (30 ml) and extracted into ethyl acetate (3 x 20 ml). The organic layer was washed with 3% citric acid solution (5 ml), saturated sodium bicarbonate solution (5 ml), and saline (5 ml). The solution was dried over MgSO 4, filtered and concentrated under reduced pressure to obtain 400 mg of crude product. Chromatography with preparative thin layer films (5% MeOH / methylene chloride) achieved 189 mg of compound 8 (71%). White amorphous solid; 1 H NMR (CDCl 3) d 7.26 (m, 5 H), 5.30 (d, 1 H), 4.55 (s, 2 H), 4.37 (m, 1 H), 3.95 (dd, 1 H), 3.75 (dd, 1 H ), 3.00 (s, 3H). MS m / e 355 (M + H). To a cooled solution of compound 8 (189 mg, 0.534 mmol) in anhydrous ethyl acetate (10 mL) was slowly bubbled anhydrous HCl for a period of 15 seconds. The mixture was then stirred at room temperature for 60 minutes and concentrated under reduced pressure. Trituration with ethyl ether gave compound 9 which was dried and used directly in the next step. White amorphous solid; MS m / e 255 (M + H). A solution of compound 9 (82 mg, 0.282 mmol) and N-methylmorpholine (0.031 mL, 0.282 mmol) in anhydrous DMF (10 mL) was stirred for 5 minutes. To this solution was added compound 1 b (77 mg, 0.282 mmol), 1-HOBt (38 mg, 0.282 mmol), and EDCI (65 mg, 0.338 mmol). The mixture was stirred 16 hours at room temperature, poured into water (30 ml) and extracted into ethyl acetate (5 x 20 ml). The organic layer was washed with 3% citric acid solution (5 ml), saturated sodium bicarbonate solution (5 ml), and saline (5 ml). The solution was dried over MgSO, filtered and concentrated under reduced pressure to obtain 50 mg of crude product. Chromatography with preparative thin layer films (5% MeOH / methylene chloride) achieved 25 mg of compound 4b (17%). White amorphous solid; MS m / e 510 (M + H). To a refrigerated (0 ° C) solution of compound 4b (25 mg, 0.049 mmol) in anhydrous methylene chloride (10 ml) was added slowly a Dess-Martin periodinane reagent (31 mg, 0.074 mmol). The cooling bath was removed and the mixture was stirred for an additional 90 minutes. The mixture was then washed with 10% sodium thiosulfate solution (2 x 5 ml), saturated sodium bicarbonate solution (2 ml), and saline (2 ml). The solution was dried over MgSO 4, filtered and concentrated under reduced pressure to obtain 14 mg of compound 5b (56%). White amorphous solid; 1 H NMR (CDCl 3) d 9.09 (br, 1 H), 7.25 (m, 1 1 H), 5.45 (m, 1 H), 5.28 (m, 1 H), 4.94 (dd, 2 H), 4.55 (dd) , 2H), 4.1 5 (m, 2H), 3.88 (m, 1 H), 3.66 (m, 2H), 3.23 (s, 3H), 2.95 (s, 3H). MS m / e 508 (M + H). EXAMPLE 8 CH3SO2-D-Ser (Bn) -Phe-CONHOBn.
This compound was prepared by General Method A. 1 H NMR (CDCl 3) d 9.53 (m, 1 H), 7.25 (m, 1 6H), 5.49 (m, 1 H), 4.92 (m, 2H), 4.40 ( dd, 2H), 4.18 (m, 2H), 3.55 (m, 2H), 2.81 (s, 3H), 2.72 (m, 2H). MS m / e 554 (M + H). Example 9 CH3S02-D-Ser (Bn) -Ser (Me) -CONHOEt.
This compound was prepared by General Method A. 1 H NMR (CDCl 3) d 9.38 (d, 1H), 7.21 (m, 11H), 5.49 (m, 1H), 5.37 (m, 1H), 4.49 (dd, 2H) , 4.09 (q, 2H), 3.82 (m, 1H), 3.61 (m, 1H), 3.35 (m, 1H), 3.18 (m, 1H), 2.93 (s, 3H), 1.38 (t, 3H). MS m / e 492 (M + H). Example 10 Cbz-Val-Phe-CONHOBn.
This compound was prepared by General Method B. 1 H NMR (CDCl 3) d 9.34 (br s, 1H), 7.25 (m, 15H), 6.82 (d, 1H), 5.45 (m, 1H), 5.08 (s, 2H) ), 5.03 (br, 1H), 4.99 (dd, 2H), 4.18 (m, 1H), 3.32 (dd, 1H), 3.07 (dd, 1H), 1.44 (m, 1H), 0.87 (m, 6H) . MS m / e 532 (M + H).
Example 11 Cbz-Val-Nle-CONHOBn.
This compound was prepared by General Method B. 1 H NMR (CDCl 3) d 9.46 (br s, 1 H), 7.20 (m, 10 H), 6.85 (d, 1 H), 5.45 (m, 1 H), 5.11 (s, 2H), 5.01 (br, 1H), 4.92 (m, 1H), 4.15 (m, 1H), 3.20 (br, 2H), 1.40 (m, 15H). MS m / e 498 (M + H). Example 12 Cbz-Leu-Leu-Phe-CONHOCH3.
This compound was prepared by General Method A. 1 H NMR (CDCl 3) d 9.48 (s, 1H), 7.24 (m, 10H), 6.92 (d, 1H), 6.50 (d, 1H), 5.38 (m, 1H) , 5.09 (s, 2H), 4.39 (m, 1H), 4.16 (m, 2H), 3.78 (s, 3H), 3.26 (dd, 1H), 3.02 (dd, 1H), 2.02 (m, 1H), 1.42 (m, 5H), 0.83 (m, 12H). MS m / e 583 (M + H).
Example 13 Cbz-Leu-Leu-Phe-CONHOBn.
This compound was prepared by General Method A. 1 H NMR (CDCl 3) d 9.48 (s, 1H), 7.24 (m, 15H), 6.78 (d, 1H), 6.58 (d, 1H), 5.43 (m, 1H) , 5.21 (m, 1H), 5.09 (s, 2H), 4.94 (dd, 2H), 4.42 (m, 1H), 4.16 (m, 1H), 3.26 (dd, 1H), 3.02 (dd, 1H), 2.02 (m, 1H), 1.42 (m, 5H), 0.83 (m, 12H). MS m / e 659 (M + H). Example 14 Cbz-Leu-Phe-CONHOBu.
This compound was prepared by General Method A. 1 H NMR (CDCl 3) d 9.21 (br s, 1 H), 7.26 (m, 10 H), 6.82 (d, 1 H), 5.40 (m, 1 H), 5.08 (s, 2H), 4.14 (m, 1H), 3.68 (m, 2H), 3.35 (m, 1H), 3.02 (m, 1H), 1.39 (m, 7H), 0.83 (m, 9H). MS m / e 512 (M + H). Example 15 PhCO-Phe-Nle-CONHOEt.
This compound was prepared by General Method B. 1 H NMR (CDCl 3) d 9.12 (d, 1 H), 7.40 (m, 10 H), 6.75 (d, 1 H), 5.38 (m, 1 H), 5.13 (m , 1 H), 4.87 (m, 1 H), 4.25 (m, 1 H), 4.17 (m, 1 H), 4.02 (m, 2 H), 3.20 (m, 2 H), 2.35 (m, 2 H), 1 .40 (m, 8H). MS m / e 454 (M + H). Example 16 Inhibition of Calpain To evaluate the inhibitory activity, concentrated (40-fold concentrated) solutions of each compound to be tested were prepared in 100% anhydrous DMSO and 5 μl of each inhibitor preparation was prorated in each of the three cavities of a sheet of 96 cavities. Recombinant human calpain I, prepared by the method of Meyer er al. (Biochem J. 1996, 314: 51-1 -519), was diluted in an assay buffer (ie, 50 mM Tris, 50 mM NaCl, 1 mM EDTA, 1 mM EGTA, and 5 mM ß-mercaptoethanol, pH 7.5, including 0.2 mM Succ-Leu-Tyr-MNA), and 175 μl was apportioned in the same cavities containing the concentrations of the independent inhibitor as well as the positive control cavities containing 5 μl of DMSO, but not compound. To initiate the reaction, 20 μl of 50 mM CaCl2 in a test buffer was added to all the cavities of the sheet, except for three, which were used as background baseline controls. Hydrolysis of the substrate is monitored every 5 minutes for a total of 30 minutes. Hydrolysis of the substrate in the absence of the inhibitor was linear for up to 15 minutes. The inhibition of calpain I activity was calculated as the percent reduction in the rate of hydrolysis of the substrate in the presence of the inhibitor relative to the velocity in its absence. The comparison between the control and inhibited rates were made within the linear range for the hydrolysis of the substrate. The IC50S of the inhibitors (production of 50% inhibition concentration) were determined from the percent reduction in rates of substrate hydrolysis in the presence of five to seven different concentrations of the test compound. The results were recorded as percent inhibition against the concentration of the inhibitor diagram, and the IC50 was calculated by fixing the data to the logistic equation of four parameters shown below using the GraphPad Prism program (GraphPad Software, Inc., San Diego, CA .).
y = d + [(a-d) / (1 + (x / c)]
The parameters a, b, c, and d are defined as follows: a is% inhibition in the absence of the inhibitor, b is the slope, c is the IC50, and d is the% inhibition at an infinite concentration of the inhibitor. The results are presented in Table I below, which lists the examples of the invention. Table I. Calpain Inhibitory Activity.
It is intended that each of the patents, applications, and printed publications mentioned in this patent document are hereby incorporated by reference in their entirety. As those skilled in the art will appreciate, numerous changes and modifications may be made to the preferred embodiments of the invention without departing from the spirit of the invention. It is intended that all such variations fall within the scope of the invention.
Claims (28)
- CLAIMS 1. A compound of Formula I: I where: W is A-B-D; A is aryl (CH2) n, heteroaryl (CH2) n, alkyl having from one to about 14 carbons, alkenyl having from two to about 14 carbons, or cycloalkyl having from 3 to about 10 carbons, said group A being substituted optionally with one or more groups J; B is a bond or CO, SO, SO2, OCO, NR5CO, NR5SO2 or NR5SO; D is a bond, an amino acid residue, or a peptide composed of 2 to about 5 amino acid residues, said amino acid residue (s) are independently defined by the formula -NH-** CH (Rβ ) -CO-, in which the ** indicate the carbon possession of an a-amino acid residue, where R6 is different from hydrogen, the D configuration, the L configuration, or a mixture of D- and L-; n is an integer from 0 to about 6; R1, R2, R3, R4, R5, and R6 are, independently, hydrogen, alkyl having from one to about 14 carbons, or cycloalkyl having from 3 to about 10 carbons, said alkyl and cycloalkyl groups being optionally substituted with one or more groups J; and J is halogen, lower alkyl, aryl, heteroaryl, haloaryl, amino optionally substituted with one to three aryl or lower alkyl groups, guanidino, alkoxycarbonyl, amido, lower alkylamido, sulfonamido, lower alkyl sulfonamido, lower alkylsulfonyl, lower alkylsulfoxy, alkylthio lower, lower alkoxy, aryloxy, arylalkyloxy, hydroxy, carboxy, cyano, or nitro; and * denotes the carbon possession of an a-amino acid residue, where R2 is different from hydrogen, the D configuration, the L configuration, or a mixture of the D- and L- configurations.
- 2. The compound according to claim 1, characterized in that R1 is alkyl or alkyl substituted with J, wherein J is lower alkoxy.
- 3. The compound according to claim 2, characterized in that R1 is benzyl, methoxymethyl, or butyl.
- 4. The compound according to claim 1, characterized in that R2 is alkyl or alkyl substituted with J, wherein J is arylalkyloxy or aryl.
- 5. The compound according to claim 2, characterized in that R2 is isobutyl or benzyloxymethyl.
- 6. The compound according to claim 1, characterized in that R3 is H.
- The compound according to claim 1, characterized in that R4 is alkyl, J-substituted alkyl, cycloalkyl, or cycloalkyl substituted with J wherein J is aryl, haloaryl, alkyl or heteroaryl.
- The compound according to claim 7, characterized in that R 4 is methyl, ethyl, propyl, butyl, benzyl, (pentafluorophenyl) methyl, tert-butyl, or 4-methylcyclohexyl.
- The compound according to claim 1, characterized in that W is benzyloxycarbonyl, methanesulfonyl, benzoyl, tert-butoxycarbonyl, or benzyloxycarbonyl-leucyl.
- 10. The compound according to claim 1, characterized in that R3 is H, and R1 is alkyl or substituted alkyl with J, wherein J is lower alkoxy. eleven .
- The compound according to claim 1, characterized in that R3 is H, and R2 is alkyl or alkyl substituted with J, wherein J is arylalkyloxy or aryl.
- The compound according to claim 1, characterized in that R3 is H, and R4 is alkyl, alkyl substituted with J, cycloalkyl, or cycloalkyl substituted with J, wherein J is aryl, alkyl, haloaryl, or heteroaryl.
- The compound according to claim 1, characterized in that R3 is H, and R1 is alkyl or alkyl substituted with J, wherein J is lower alkoxy, and R2 is alkyl or substituted alkyl with J wherein J is arylalkyloxy or aryl.
- The compound according to claim 1, characterized in that R3 is H, R1 is alkyl or J-substituted alkyl, wherein J is lower alkoxy, and R4 is alkyl, J-substituted alkyl, cycloalkyl, or cycloalkyl substituted with J wherein J is aryl, haloaryl, alkyl or heteroaryl.
- The compound according to claim 1, characterized in that R3 is H, R1 is alkyl or J-substituted alkyl wherein J is lower alkoxy, R4 is alkyl, J-substituted alkyl, cycloalkyl, or cycloalkyl substituted with J wherein J is aryl, haloaryl, alkyl or heteroaryl, and R 2 is alkyl or substituted alkyl with J wherein J is arylalkyloxy or aryl.
- The compound according to claim 1, characterized in that R is benzyl, methoxymethyl, or butyl; R2 is isobutyl or benzyloxymethyl; R3 is hydrogen; R 4 is methyl, ethyl, propyl, butyl, benzyl, (pentafluorophenyl) methyl, tert-butyl, or 4-methylcyclohexyl; and W is benzyloxycarbonyl, methanesulfonyl, benzoyl, tert-butoxycarbonyl, or benzyl oxycarbonyl-leucyl.
- 17. The compound according to claim 1, characterized in that R1 is benzyl; R2 is isobutyl; * indicates the carbon of an a-amino acid residue that has the L configuration; R3 is hydrogen; R 4 is methyl, ethyl, propyl, butyl, benzyl, (pentafluorophenyl) methyl, tert-butyl, or 4-methylcyclohexyl; and W is benzyloxycarbonyl or benzyloxycarbonyl-leucyl.
- 18. The compound according to claim 1, characterized in that R1 is benzyl; R2 is benzyloxymethyl; * indicates the carbon of an a-amino acid residue that has the D configuration; R3 is hydrogen; R 4 is methyl, ethyl, or benzyl; and W is methanesulfonyl.
- 1 9. A compound as described in Table I, supra.
- 20. A composition for inhibiting a protease selected from the group consisting of the serine proteases and cysteine proteases which comprise a compound of claim 1.
- The composition according to claim 20, characterized in that said compound is selected from the group consisting of the compounds described in Table 1, supra.
- 22. A method for inhibiting a protease comprising contacting a protease selected from the group consisting of serine proteases and cysteine proteases with an inhibitory amount of a compound of claim 1.
- 23. The method according to claim 22, characterized in that said compound is selected from the group consisting of the compounds described in Table 1, supra.
- 24. A method for inhibiting a protease comprising contacting a protease selected from the group consisting of serine proteases and cysteine proteases with an inhibitory amount of a composition comprising a compound of claim 1.
- 25. The method according to claim 24, characterized in that said compound is selected from the group consisting of the compounds described in Table 1, supra.
- 26. A pharmaceutical composition comprising a compound of claim 1 and a pharmaceutically acceptable carrier.
- 27. A composition for the treatment of a disorder selected from the group consisting of neurodegeneration, stroke, Alzheimer's, amyotrophy, motor neuron damage, acute central nervous system injury, muscular dystrophy, bone resorption, thrombocyte agglomeration, cataracts and inflammation , which comprises a compound of claim 1 and a pharmaceutically acceptable carrier.
- 28. A method for the treatment of a disorder selected from the group consisting of neurodegeneration, stroke, Alzheimer's, amyotrophy, motor neuron damage, acute central nervous system injury, muscular dystrophy, bone resorption, thrombocyte agglomeration, cataracts, and inflammation , which comprises administering to a subject in need of such treatment an effective amount of a compound of claim 1.
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US60/101,414 | 1998-09-22 | ||
US09398562 | 1999-09-17 |
Publications (1)
Publication Number | Publication Date |
---|---|
MXPA01002977A true MXPA01002977A (en) | 2002-03-05 |
Family
ID=
Similar Documents
Publication | Publication Date | Title |
---|---|---|
US7001907B2 (en) | Peptide-containing α-ketoamide cysteine and serine protease inhibitors | |
AU749099B2 (en) | Quinoline-containing alpha-ketoamide cysteine and serine protease inhibitors | |
EP0975353B1 (en) | Peptidyl-2-amino-1-hydroxyalkanesulfonic acid cysteine protease inhibitors | |
US6686335B1 (en) | Hydroxamate-containing cysteine and serine protease inhibitors | |
MXPA01002977A (en) | Hydroxamate-containing cysteine and serine protease inhibitors | |
US6486193B2 (en) | 3-substituted pyrrolidines useful as inhibitors of matrix metalloproteinases | |
MXPA00003419A (en) | PEPTIDE-CONTAINING&agr;-KETOAMIDE CYSTEINE AND SERINE PROTEASE INHIBITORS | |
EP1140818B1 (en) | Amidomalonamides and their use as inhibitors of matrix metalloproteinase | |
US5723580A (en) | Ketomethylene group-containing aldehyde cysteine and serine protease inhibitors | |
JP2001501178A (en) | Cysteine and serine protease inhibitors of thiomethylene group-containing aldehydes | |
WO2000040553A1 (en) | 3-substituted pyrrolidines useful as inhibitors of matrix metallo-proteinases | |
MXPA00003431A (en) | QUINOLINE-CONTAINING&agr;-KETOAMIDE CYSTEINE AND SERINE PROTEASE INHIBITORS | |
MXPA01006671A (en) | Amidomalonamides and their use as inhibitors of matrix metalloproteinase |