HK1162614A1 - Method and devices for genome sequence assembly - Google Patents

Method and devices for genome sequence assembly

Info

Publication number
HK1162614A1
HK1162614A1 HK12102918.1A HK12102918A HK1162614A1 HK 1162614 A1 HK1162614 A1 HK 1162614A1 HK 12102918 A HK12102918 A HK 12102918A HK 1162614 A1 HK1162614 A1 HK 1162614A1
Authority
HK
Hong Kong
Prior art keywords
devices
genome sequence
sequence assembly
assembly
genome
Prior art date
Application number
HK12102918.1A
Original Assignee
Bgi Tech Solutions Co Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Bgi Tech Solutions Co Ltd filed Critical Bgi Tech Solutions Co Ltd
Publication of HK1162614A1 publication Critical patent/HK1162614A1/en

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/20—Sequence assembly

Landscapes

  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
HK12102918.1A 2011-03-02 2012-03-22 Method and devices for genome sequence assembly HK1162614A1 (en)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN2011100498850A CN102206704B (en) 2011-03-02 2011-03-02 Method and device for assembling genome sequence

Publications (1)

Publication Number Publication Date
HK1162614A1 true HK1162614A1 (en) 2012-08-31

Family

ID=44695763

Family Applications (1)

Application Number Title Priority Date Filing Date
HK12102918.1A HK1162614A1 (en) 2011-03-02 2012-03-22 Method and devices for genome sequence assembly

Country Status (3)

Country Link
CN (1) CN102206704B (en)
HK (1) HK1162614A1 (en)
WO (1) WO2012116658A2 (en)

Families Citing this family (22)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN103160937B (en) * 2011-12-15 2015-02-18 深圳华大基因科技服务有限公司 Method for conducting enrichment library construction and SNP analysis on gene of complex genome of higher plant
CN102682226B (en) * 2012-04-18 2015-09-30 盛司潼 A kind of nucleic acid sequencing information handling system and method
CN102789553B (en) * 2012-07-23 2015-04-15 中国水产科学研究院 Method and device for assembling genomes by utilizing long transcriptome sequencing result
CN102867134B (en) * 2012-08-16 2016-05-18 盛司潼 A kind of system and method that gene order fragment is spliced
KR101508817B1 (en) * 2012-10-29 2015-04-08 삼성에스디에스 주식회사 System and method for aligning genome sequence
WO2015062184A1 (en) 2013-11-01 2015-05-07 Accurascience, Llc Method and apparatus for calling single-nucleotide variations and other variations
US20160026756A1 (en) * 2013-11-01 2016-01-28 Origenome, Llc Method and apparatus for separating quality levels in sequence data and sequencing longer reads
CN103810402B (en) * 2014-02-25 2017-01-18 北京诺禾致源生物信息科技有限公司 Data processing method and device for genomes
CN105989249B (en) * 2014-09-26 2019-03-15 南京无尽生物科技有限公司 For assembling the method, system and device of genome sequence
CN104484558B (en) * 2014-12-08 2018-04-24 深圳华大基因科技服务有限公司 The analysis report automatic generation method and system of biological information project
CN105219765A (en) * 2015-11-09 2016-01-06 中国水产科学研究院 Protein sequence is utilized to build genomic method and apparatus
CN108350495B (en) * 2016-02-26 2021-10-01 深圳华大智造科技股份有限公司 Method and apparatus for assembling partitioned long fragment sequences
CN106021978B (en) * 2016-04-06 2019-03-29 晶能生物技术（上海）有限公司 A kind of de novo sequencing data assemble method based on optics map platform Irys
CN107858408A (en) * 2016-09-19 2018-03-30 深圳华大基因科技服务有限公司 A kind of generation sequence assemble method of genome two and system
CN108629156B (en) * 2017-03-21 2020-08-28 深圳华大基因科技服务有限公司 Method, device and computer readable storage medium for correcting error of third generation sequencing data
CN108866173A (en) * 2017-05-16 2018-11-23 深圳华大基因科技服务有限公司 A kind of verification method of standard sequence, device and its application
CN110021359B (en) * 2017-07-24 2021-05-04 深圳华大基因科技服务有限公司 Method and device for removing redundancy of combined assembly result of second-generation sequence and third-generation sequence
US20210217493A1 (en) * 2018-07-27 2021-07-15 Seekin, Inc. Reducing noise in sequencing data
CN111564182B (en) * 2020-05-12 2024-02-09 西藏自治区农牧科学院水产科学研究所 High-weight recovery of fish of the genus of Glehnian chromosome-level assembly of (2)
CN113724788B (en) * 2021-07-29 2023-09-12 哈尔滨医科大学 Method for identifying extrachromosomal circular DNA (deoxyribonucleic acid) constitutive genes of tumor cells
CN115273984B (en) * 2022-09-30 2022-11-29 北京诺禾致源科技股份有限公司 Method and device for identifying genome tandem repeat region
CN116403647B (en) * 2023-06-08 2023-08-15 上海精翰生物科技有限公司 Biological information detection method for detecting slow virus integration site and application thereof

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN101504697B (en) * 2008-12-12 2010-09-08 深圳华大基因研究院 Construction method and system for genome sequencing equipment and its fragment connection stand
CN101894211B (en) * 2010-06-30 2012-08-22 深圳华大基因科技有限公司 Gene annotation method and system
CN101967684B (en) * 2010-09-01 2013-02-27 深圳华大基因科技有限公司 Sequencing library, preparation method thereof, and terminal sequencing method and device

Also Published As

Publication number Publication date
CN102206704B (en) 2013-11-20
WO2012116658A2 (en) 2012-09-07
CN102206704A (en) 2011-10-05

Similar Documents

Publication Publication Date Title
HK1162614A1 (en) Method and devices for genome sequence assembly
GB2500163B (en) Method
GB2493207B (en) Method
GB201120527D0 (en) Method
EP2716970A4 (en) Waste-melting method
GB201112981D0 (en) An arrangement and method
GB201117477D0 (en) Method
GB201116530D0 (en) Method
GB201105436D0 (en) Method
GB201220620D0 (en) Method
GB201212757D0 (en) Method
GB201112970D0 (en) An arrangement and method
GB201121301D0 (en) Method
GB201114919D0 (en) Method
GB201114325D0 (en) Method
GB201101219D0 (en) Method
GB201117230D0 (en) Connection method
GB201111189D0 (en) Method
GB201117476D0 (en) Method
GB201115783D0 (en) Method
GB201111673D0 (en) Method
GB201108041D0 (en) Method
GB201122297D0 (en) Vaccine - screening method
GB201119967D0 (en) Method
GB201117358D0 (en) Method