EP2231851A4 - System for the detection of a biological pathogen and use thereof - Google Patents

System for the detection of a biological pathogen and use thereof

Info

Publication number
EP2231851A4
EP2231851A4 EP08873532A EP08873532A EP2231851A4 EP 2231851 A4 EP2231851 A4 EP 2231851A4 EP 08873532 A EP08873532 A EP 08873532A EP 08873532 A EP08873532 A EP 08873532A EP 2231851 A4 EP2231851 A4 EP 2231851A4
Authority
EP
European Patent Office
Prior art keywords
detection
biological pathogen
pathogen
biological
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP08873532A
Other languages
German (de)
French (fr)
Other versions
EP2231851A2 (en
Inventor
Colin J H Brenan
Tom Morrison
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Life Technologies Corp
Original Assignee
Biotrove Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Biotrove Inc filed Critical Biotrove Inc
Publication of EP2231851A2 publication Critical patent/EP2231851A2/en
Publication of EP2231851A4 publication Critical patent/EP2231851A4/en
Withdrawn legal-status Critical Current

Links

Classifications

    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B82—NANOTECHNOLOGY
    • B82Y—SPECIFIC USES OR APPLICATIONS OF NANOSTRUCTURES; MEASUREMENT OR ANALYSIS OF NANOSTRUCTURES; MANUFACTURE OR TREATMENT OF NANOSTRUCTURES
    • B82Y30/00—Nanotechnology for materials or surface science, e.g. nanocomposites
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6816—Hybridisation assays characterised by the detection means
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2200/00—Solutions for specific problems relating to chemical or physical laboratory apparatus
    • B01L2200/02—Adapting objects or devices to another
    • B01L2200/026—Fluid interfacing between devices or objects, e.g. connectors, inlet details
    • B01L2200/027—Fluid interfacing between devices or objects, e.g. connectors, inlet details for microfluidic devices
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2200/00—Solutions for specific problems relating to chemical or physical laboratory apparatus
    • B01L2200/06—Fluid handling related problems
    • B01L2200/0642—Filling fluids into wells by specific techniques
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/06—Auxiliary integrated devices, integrated components
    • B01L2300/0627—Sensor or part of a sensor is integrated
    • B01L2300/0636—Integrated biosensor, microarrays
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/08—Geometry, shape and general structure
    • B01L2300/0809—Geometry, shape and general structure rectangular shaped
    • B01L2300/0819—Microarrays; Biochips
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/08—Geometry, shape and general structure
    • B01L2300/0809—Geometry, shape and general structure rectangular shaped
    • B01L2300/0829—Multi-well plates; Microtitration plates
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/08—Geometry, shape and general structure
    • B01L2300/0832—Geometry, shape and general structure cylindrical, tube shaped
    • B01L2300/0838—Capillaries
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/08—Geometry, shape and general structure
    • B01L2300/0893—Geometry, shape and general structure having a very large number of wells, microfabricated wells
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/08—Geometry, shape and general structure
    • B01L2300/0896—Nanoscaled
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/16—Surface properties and coatings
    • B01L2300/161—Control and use of surface tension forces, e.g. hydrophobic, hydrophilic
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6846—Common amplification features
EP08873532A 2007-12-20 2008-12-22 System for the detection of a biological pathogen and use thereof Withdrawn EP2231851A4 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US1555507P 2007-12-20 2007-12-20
PCT/US2008/014042 WO2009120183A2 (en) 2007-12-20 2008-12-22 System for the detection of a biological pathogen and use thereof

Publications (2)

Publication Number Publication Date
EP2231851A2 EP2231851A2 (en) 2010-09-29
EP2231851A4 true EP2231851A4 (en) 2011-02-02

Family

ID=41114491

Family Applications (1)

Application Number Title Priority Date Filing Date
EP08873532A Withdrawn EP2231851A4 (en) 2007-12-20 2008-12-22 System for the detection of a biological pathogen and use thereof

Country Status (3)

Country Link
EP (1) EP2231851A4 (en)
CN (1) CN102015996A (en)
WO (1) WO2009120183A2 (en)

Families Citing this family (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2848304A1 (en) 2011-09-09 2013-03-14 The Board Of Trustees Of The Leland Stanford Junior University Methods for sequencing a polynucleotide
CN102608090B (en) * 2012-03-20 2013-10-09 武汉大学 Homogeneous phase virus immune-detecting method based on quantum dot
CA2966215A1 (en) * 2014-10-30 2016-05-06 Sightline Innovation Inc. System, method and apparatus for pathogen detection
CN104988245B (en) * 2015-07-28 2018-05-08 中华人民共和国北京出入境检验检疫局 Detection dahlia hides the RT-qPCR detection kits and oligonucleotides of viroid
CN105154325B (en) * 2015-09-24 2017-06-13 中国科学院东北地理与农业生态研究所 Fungi autoeciousness soybean cyst nematode Heterodera glycines detection means
CN111197094B (en) * 2018-11-16 2021-02-23 深圳市疾病预防控制中心 Compositions, kits and methods for genotyping vibrio parahaemolyticus
AU2021347357A1 (en) 2020-09-24 2023-04-20 InnoTech Precision Medicine, Inc. Systems, apparatus, and methods for detecting pathogens
CN113832036B (en) * 2021-09-16 2023-08-22 王善仙 Moisture-exposed plaque bacteria CLF007, immobilized microbial agent and application thereof

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005001435A2 (en) * 2002-08-26 2005-01-06 The Regents Of The University Of California System for autonomous monitoring of bioagents

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20040121309A1 (en) * 2002-12-06 2004-06-24 Ecker David J. Methods for rapid detection and identification of bioagents in blood, bodily fluids, and bodily tissues
CA2448098A1 (en) * 2002-11-26 2004-05-26 Paul A. Horgen Ultrasensitive detection of pathogenic microbes
US20060094108A1 (en) * 2002-12-20 2006-05-04 Karl Yoder Thermal cycler for microfluidic array assays
JP2009514551A (en) * 2005-11-09 2009-04-09 プリメーラ バイオシステムズ インコーポレーティッド Multiple quantitative detection method for pathogens

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005001435A2 (en) * 2002-08-26 2005-01-06 The Regents Of The University Of California System for autonomous monitoring of bioagents

Non-Patent Citations (6)

* Cited by examiner, † Cited by third party
Title
CHANDLER DARRELL P ET AL: "Automated immunomagnetic separation and microarray detection of E. coli O157:H7 from poultry carcass rinse", INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, ELSEVIER SCIENCE PUBLISHERS, AMSTERDAM, NL, vol. 70, no. 1-2, 22 October 2001 (2001-10-22), pages 143 - 154, XP002261190, ISSN: 0168-1605, DOI: 10.1016/S0168-1605(01)00536-0 *
HINDSON B J ET AL: "APDS: the autonomous pathogen detection system", BIOSENSORS AND BIOELECTRONICS, ELSEVIER BV, NL, vol. 20, no. 10, 15 April 2005 (2005-04-15), pages 1925 - 1931, XP004769125, ISSN: 0956-5663, DOI: 10.1016/J.BIOS.2004.09.027 *
HSIAO CHEN REN ET AL: "Identification of medically important molds by an oligonucleotide array.", JOURNAL OF CLINICAL MICROBIOLOGY AUG 2005 LNKD- PUBMED:16081907, vol. 43, no. 8, August 2005 (2005-08-01), pages 3760 - 3768, XP009142181, ISSN: 0095-1137 *
MAKINO S-I ET AL: "Detection of anthrax spores from the air by real-time PCR", LETTERS IN APPLIED MICROBIOLOGY, OXFORD, GB, vol. 33, no. 3, 1 September 2001 (2001-09-01), pages 237 - 240, XP002226329, ISSN: 1472-765X, DOI: 10.1046/J.1472-765X.2001.00989.X *
PECCIA J ET AL: "Incorporating polymerase chain reaction-based identification, population characterization, and quantification of microorganisms into aerosol science: A review", ATMOSPHERIC ENVIRONMENT, PERGAMON, GB, vol. 40, no. 21, 1 July 2006 (2006-07-01), pages 3941 - 3961, XP025247317, ISSN: 1352-2310, [retrieved on 20060701], DOI: 10.1016/J.ATMOSENV.2006.02.029 *
WILSON KENNETH H ET AL: "High-density microarray of small-subunit ribosomal DNA probes", APPLIED AND ENVIRONMENTAL MICROBIOLOGY, AMERICAN SOCIETY FOR MICROBIOLOGY, US, vol. 68, no. 5, 1 May 2002 (2002-05-01), pages 2535 - 2541, XP002289520, ISSN: 0099-2240, DOI: 10.1128/AEM.68.5.2535-2541.2002 *

Also Published As

Publication number Publication date
WO2009120183A3 (en) 2009-12-17
EP2231851A2 (en) 2010-09-29
CN102015996A (en) 2011-04-13
WO2009120183A2 (en) 2009-10-01

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