CN117247995A - Method for carrying out molecular fluorescence in-situ hybridization treatment on G-banding glass slide - Google Patents
Method for carrying out molecular fluorescence in-situ hybridization treatment on G-banding glass slide Download PDFInfo
- Publication number
- CN117247995A CN117247995A CN202311179445.6A CN202311179445A CN117247995A CN 117247995 A CN117247995 A CN 117247995A CN 202311179445 A CN202311179445 A CN 202311179445A CN 117247995 A CN117247995 A CN 117247995A
- Authority
- CN
- China
- Prior art keywords
- slide
- banding
- immersing
- ethanol
- tape
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
Links
- 238000000034 method Methods 0.000 title claims abstract description 41
- 238000007901 in situ hybridization Methods 0.000 title claims abstract description 17
- 239000011521 glass Substances 0.000 title description 10
- 239000000523 sample Substances 0.000 claims abstract description 42
- 238000001514 detection method Methods 0.000 claims abstract description 27
- 238000009396 hybridization Methods 0.000 claims abstract description 26
- 238000005406 washing Methods 0.000 claims abstract description 25
- 238000001035 drying Methods 0.000 claims abstract description 18
- 239000000243 solution Substances 0.000 claims abstract description 14
- 239000007853 buffer solution Substances 0.000 claims abstract description 12
- 238000006243 chemical reaction Methods 0.000 claims abstract description 11
- 239000003960 organic solvent Substances 0.000 claims abstract description 11
- 239000003086 colorant Substances 0.000 claims abstract description 5
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 claims description 35
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 claims description 24
- 238000002791 soaking Methods 0.000 claims description 18
- 210000004027 cell Anatomy 0.000 claims description 17
- 210000000349 chromosome Anatomy 0.000 claims description 17
- 239000003480 eluent Substances 0.000 claims description 13
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 claims description 12
- 101000719121 Arabidopsis thaliana Protein MEI2-like 1 Proteins 0.000 claims description 12
- 101000857677 Homo sapiens Runt-related transcription factor 1 Proteins 0.000 claims description 12
- 102100025373 Runt-related transcription factor 1 Human genes 0.000 claims description 12
- 239000007788 liquid Substances 0.000 claims description 12
- 239000008096 xylene Substances 0.000 claims description 10
- 230000008018 melting Effects 0.000 claims description 9
- 239000000834 fixative Substances 0.000 claims description 8
- 238000002844 melting Methods 0.000 claims description 8
- 102100021569 Apoptosis regulator Bcl-2 Human genes 0.000 claims description 7
- 239000000872 buffer Substances 0.000 claims description 7
- 108091012583 BCL2 Proteins 0.000 claims description 6
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 claims description 6
- CTQNGGLPUBDAKN-UHFFFAOYSA-N O-Xylene Chemical compound CC1=CC=CC=C1C CTQNGGLPUBDAKN-UHFFFAOYSA-N 0.000 claims description 6
- 229960000583 acetic acid Drugs 0.000 claims description 6
- KRKNYBCHXYNGOX-UHFFFAOYSA-N citric acid Chemical compound OC(=O)CC(O)(C(O)=O)CC(O)=O KRKNYBCHXYNGOX-UHFFFAOYSA-N 0.000 claims description 6
- 239000012362 glacial acetic acid Substances 0.000 claims description 6
- -1 TMAC Substances 0.000 claims description 4
- 230000018044 dehydration Effects 0.000 claims description 4
- 238000006297 dehydration reaction Methods 0.000 claims description 4
- LWIHDJKSTIGBAC-UHFFFAOYSA-K tripotassium phosphate Chemical compound [K+].[K+].[K+].[O-]P([O-])([O-])=O LWIHDJKSTIGBAC-UHFFFAOYSA-K 0.000 claims description 4
- 238000002360 preparation method Methods 0.000 claims description 3
- IHPYMWDTONKSCO-UHFFFAOYSA-N 2,2'-piperazine-1,4-diylbisethanesulfonic acid Chemical compound OS(=O)(=O)CCN1CCN(CCS(O)(=O)=O)CC1 IHPYMWDTONKSCO-UHFFFAOYSA-N 0.000 claims description 2
- JKMHFZQWWAIEOD-UHFFFAOYSA-N 2-[4-(2-hydroxyethyl)piperazin-1-yl]ethanesulfonic acid Chemical compound OCC[NH+]1CCN(CCS([O-])(=O)=O)CC1 JKMHFZQWWAIEOD-UHFFFAOYSA-N 0.000 claims description 2
- FWBHETKCLVMNFS-UHFFFAOYSA-N 4',6-Diamino-2-phenylindol Chemical group C1=CC(C(=N)N)=CC=C1C1=CC2=CC=C(C(N)=N)C=C2N1 FWBHETKCLVMNFS-UHFFFAOYSA-N 0.000 claims description 2
- 239000007995 HEPES buffer Substances 0.000 claims description 2
- 239000007990 PIPES buffer Substances 0.000 claims description 2
- 208000037065 Subacute sclerosing leukoencephalitis Diseases 0.000 claims description 2
- 206010042297 Subacute sclerosing panencephalitis Diseases 0.000 claims description 2
- 239000007983 Tris buffer Substances 0.000 claims description 2
- 239000003795 chemical substances by application Substances 0.000 claims description 2
- 235000015165 citric acid Nutrition 0.000 claims description 2
- 238000007654 immersion Methods 0.000 claims description 2
- 229910000160 potassium phosphate Inorganic materials 0.000 claims description 2
- 235000011009 potassium phosphates Nutrition 0.000 claims description 2
- FQENQNTWSFEDLI-UHFFFAOYSA-J sodium diphosphate Chemical compound [Na+].[Na+].[Na+].[Na+].[O-]P([O-])(=O)OP([O-])([O-])=O FQENQNTWSFEDLI-UHFFFAOYSA-J 0.000 claims description 2
- 229940048086 sodium pyrophosphate Drugs 0.000 claims description 2
- 238000010186 staining Methods 0.000 claims description 2
- 235000019818 tetrasodium diphosphate Nutrition 0.000 claims description 2
- 239000001577 tetrasodium phosphonato phosphate Substances 0.000 claims description 2
- 241000272203 Columba Species 0.000 claims 1
- 210000001185 bone marrow Anatomy 0.000 abstract description 13
- 239000012530 fluid Substances 0.000 abstract description 11
- 201000010099 disease Diseases 0.000 abstract description 6
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 abstract description 6
- 238000005086 pumping Methods 0.000 abstract description 5
- 238000002509 fluorescent in situ hybridization Methods 0.000 description 15
- 238000004458 analytical method Methods 0.000 description 14
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 11
- 230000005945 translocation Effects 0.000 description 10
- 238000010828 elution Methods 0.000 description 9
- 238000005516 engineering process Methods 0.000 description 7
- 230000008707 rearrangement Effects 0.000 description 7
- 102100038895 Myc proto-oncogene protein Human genes 0.000 description 6
- 238000011161 development Methods 0.000 description 6
- 238000000386 microscopy Methods 0.000 description 6
- 239000006285 cell suspension Substances 0.000 description 5
- 108090000623 proteins and genes Proteins 0.000 description 5
- RZVAJINKPMORJF-UHFFFAOYSA-N Acetaminophen Chemical compound CC(=O)NC1=CC=C(O)C=C1 RZVAJINKPMORJF-UHFFFAOYSA-N 0.000 description 4
- 208000031261 Acute myeloid leukaemia Diseases 0.000 description 4
- 238000000116 DAPI staining Methods 0.000 description 4
- 238000007605 air drying Methods 0.000 description 4
- 230000009977 dual effect Effects 0.000 description 4
- 208000021173 high grade B-cell lymphoma Diseases 0.000 description 4
- 230000031864 metaphase Effects 0.000 description 4
- 239000012192 staining solution Substances 0.000 description 4
- 150000003738 xylenes Chemical class 0.000 description 4
- 101150039798 MYC gene Proteins 0.000 description 3
- 230000005856 abnormality Effects 0.000 description 3
- 230000007547 defect Effects 0.000 description 3
- 238000012217 deletion Methods 0.000 description 3
- 230000037430 deletion Effects 0.000 description 3
- 238000004925 denaturation Methods 0.000 description 3
- 230000036425 denaturation Effects 0.000 description 3
- 239000000975 dye Substances 0.000 description 3
- 230000000694 effects Effects 0.000 description 3
- 230000004927 fusion Effects 0.000 description 3
- 150000007523 nucleic acids Chemical group 0.000 description 3
- 238000003672 processing method Methods 0.000 description 3
- 239000002699 waste material Substances 0.000 description 3
- 208000024893 Acute lymphoblastic leukemia Diseases 0.000 description 2
- 208000010839 B-cell chronic lymphocytic leukemia Diseases 0.000 description 2
- 101150017888 Bcl2 gene Proteins 0.000 description 2
- 108020004414 DNA Proteins 0.000 description 2
- 208000033776 Myeloid Acute Leukemia Diseases 0.000 description 2
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 2
- 230000002759 chromosomal effect Effects 0.000 description 2
- 238000003745 diagnosis Methods 0.000 description 2
- 238000012224 gene deletion Methods 0.000 description 2
- 230000004048 modification Effects 0.000 description 2
- 238000012986 modification Methods 0.000 description 2
- 210000005259 peripheral blood Anatomy 0.000 description 2
- 239000011886 peripheral blood Substances 0.000 description 2
- 239000000047 product Substances 0.000 description 2
- 238000011160 research Methods 0.000 description 2
- 238000000926 separation method Methods 0.000 description 2
- 244000304217 Brassica oleracea var. gongylodes Species 0.000 description 1
- 206010008805 Chromosomal abnormalities Diseases 0.000 description 1
- 208000031404 Chromosome Aberrations Diseases 0.000 description 1
- 208000011359 Chromosome disease Diseases 0.000 description 1
- 208000034951 Genetic Translocation Diseases 0.000 description 1
- 208000002250 Hematologic Neoplasms Diseases 0.000 description 1
- 101000971171 Homo sapiens Apoptosis regulator Bcl-2 Proteins 0.000 description 1
- 101000813738 Homo sapiens Transcription factor ETV6 Proteins 0.000 description 1
- 102100024952 Protein CBFA2T1 Human genes 0.000 description 1
- 102100039580 Transcription factor ETV6 Human genes 0.000 description 1
- 102000004142 Trypsin Human genes 0.000 description 1
- 108090000631 Trypsin Proteins 0.000 description 1
- 230000002159 abnormal effect Effects 0.000 description 1
- 239000003513 alkali Substances 0.000 description 1
- 239000002585 base Substances 0.000 description 1
- 108700041737 bcl-2 Genes Proteins 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- 210000000988 bone and bone Anatomy 0.000 description 1
- 238000002512 chemotherapy Methods 0.000 description 1
- 230000024321 chromosome segregation Effects 0.000 description 1
- 238000004140 cleaning Methods 0.000 description 1
- 230000000295 complement effect Effects 0.000 description 1
- 230000002559 cytogenic effect Effects 0.000 description 1
- 230000007812 deficiency Effects 0.000 description 1
- 230000003628 erosive effect Effects 0.000 description 1
- 239000007850 fluorescent dye Substances 0.000 description 1
- 239000012634 fragment Substances 0.000 description 1
- 208000014951 hematologic disease Diseases 0.000 description 1
- 230000016507 interphase Effects 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 108020004707 nucleic acids Proteins 0.000 description 1
- 102000039446 nucleic acids Human genes 0.000 description 1
- 210000004940 nucleus Anatomy 0.000 description 1
- 230000007170 pathology Effects 0.000 description 1
- 210000004976 peripheral blood cell Anatomy 0.000 description 1
- 102000004169 proteins and genes Human genes 0.000 description 1
- 239000012266 salt solution Substances 0.000 description 1
- 238000012216 screening Methods 0.000 description 1
- 230000035945 sensitivity Effects 0.000 description 1
- 239000011734 sodium Substances 0.000 description 1
- 239000011780 sodium chloride Substances 0.000 description 1
- 239000001509 sodium citrate Substances 0.000 description 1
- 238000011895 specific detection Methods 0.000 description 1
- 239000013589 supplement Substances 0.000 description 1
- 238000010998 test method Methods 0.000 description 1
- HRXKRNGNAMMEHJ-UHFFFAOYSA-K trisodium citrate Chemical compound [Na+].[Na+].[Na+].[O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O HRXKRNGNAMMEHJ-UHFFFAOYSA-K 0.000 description 1
- 229940038773 trisodium citrate Drugs 0.000 description 1
- 239000012588 trypsin Substances 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6841—In situ hybridisation
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
Abstract
The application relates to the field of biotechnology, in particular to a method for performing molecular fluorescence in situ hybridization treatment on a G-banding slide. The application provides a treatment method for molecular fluorescence in situ hybridization on a G-banding slide, which comprises the following steps: 1) Immersing the G-tape slide in an organic solvent, immersing and washing the G-tape slide in a fixing solution and immersing the G-tape slide in a buffer solution; 2) Dehydrating and drying the G-banding slide processed in the step 1), adding a probe for hybridization reaction, washing the slide, drying, and adding a coloring agent for microscopic examination. The treatment method can carry out molecular fluorescence in-situ hybridization on the G-banding slide, avoid repeatedly collecting bone marrow fluid and reduce pain caused by patient puncture. And for patients with less bone marrow fluid taking amount, dry pumping or need to do a plurality of detection items caused by certain diseases, the sample amount is saved, and the detection items are enlarged.
Description
Technical Field
The application relates to the field of biotechnology, in particular to a method for performing molecular fluorescence in situ hybridization treatment on a G-banding slide.
Background
The chromosome banding technology is to treat chromosome specimen and dye it with specific dye to make the chromosome show the alternate light and shade and the horizontal lines with lines. Each chromosome is made to show unique banding through banding technology, which constitutes the banding pattern of the chromosome. The banding patterns of each pair of homologous chromosomes are substantially identical and stable, with the banding patterns of different pairs of chromosomes being different.
The method can be classified into Q development, G development, C development, T development, etc. according to the development method, wherein G development is the most commonly used technique. The chromosome specimen is treated by alkali, trypsin or other salt solution to denature protein on the chromosome, and then is dyed by Giemsa dye liquor, so that alternate bands of depth can be observed under a common microscope, positive bands (Positive bands) which are easy to color are chromosome segments rich in A-T, and conversely, segments with high G-C content are difficult to color and are Negative bands (Negative bands). The G banding method is simple and convenient, has clear banding, and can preserve chromosome specimens for a long time, so the G banding method is widely used for diagnosis and research of chromosome diseases.
Fluorescent in situ hybridization (fluorescent in situ hybridization: FISH), a fluorescent dye is labeled on a nucleic acid fragment (probe) paired with a target DNA according to the principle of base complementary pairing, the probe is specifically bound (hybridized) with a corresponding nucleic acid fragment in a specific detection material under a certain condition to form double-stranded nucleic acid, and the type and the number of the formed hybridized double strand are observed and recorded by means of a fluorescent microscope, so that the detection method for judging whether the target DNA in a sample to be detected is normal or not. Is a molecular cytogenetic diagnosis technology widely applied to clinical pathology detection for more than ten years.
For bone puncture, only conventional banding pattern analysis is sent out, but no relevant disease FISH detection is carried out, no cell suspension or bone marrow liquid remains, the patient is not willing to collect the bone marrow liquid again, or a chemotherapy scheme is used, and the FISH detection is very difficult under the condition that a living cell sample cannot be obtained again. When peripheral blood cells are detected by the fluorescence in situ hybridization technique, abnormality is not detected under the condition that blood diseases are not infiltrated into peripheral blood or abnormal cells in the peripheral blood are very few.
Disclosure of Invention
In view of the above-mentioned drawbacks of the prior art, it is an object of the present application to provide a method for performing molecular fluorescence in situ hybridization on a G-banded slide, which is used to solve the problems of the prior art.
The inventors of the present application studied and found that: the following drawbacks exist due to conventional banding pattern analysis: the microscopic deletion, the three-position or more than three-position translocation or the hidden translocation is difficult to judge, the sensitivity of the FISH technology is higher, the microscopic deletion or the hidden translocation can be detected, the deficiency of the chromosome can be made up by the FISH detection, the chromosome detection is negative, and the FISH can be positive. The requirement on the middle split phase in conventional banding pattern analysis is high: the conventional banding pattern analysis can only analyze metaphase cells, and requires that metaphase division is dispersed, the bands are clear, and the number of the bands reaches an analysis standard; while most cells of the human body do not divide, it is difficult to obtain metaphase chromosome division phase by culture, and interphase FISH is not limited by this, and metaphase division phase cells are not required.
Therefore, the conventional banding pattern analysis is the preferred technology for screening chromosomal abnormalities of hematological malignancies, and the FISH is an important supplement to the conventional banding technology, and the FISH detection is performed on a glass slide subjected to the conventional banding core analysis such as the G-banding, so that the method can become a great improvement of the detection technology, can avoid repeated collection of bone marrow fluid, reduce pain caused by patient puncture, save sample quantity and enlarge detection projects.
To achieve the above and other related objects, a first aspect of the present application provides a method for performing molecular fluorescence in situ hybridization on a G-banded slide, comprising the steps of:
1) Immersing the G-tape slide in an organic solvent, immersing and washing the G-tape slide in a fixing solution and immersing the G-tape slide in a buffer solution;
2) Dehydrating and drying the G-banding slide processed in the step 1), adding a probe for hybridization reaction, washing the slide, drying, and adding a coloring agent for microscopic examination.
In a second aspect, the present application provides a G-tape slide, which is processed by the aforementioned processing method.
In a third aspect the present application provides the use of the aforementioned treatment method, or the aforementioned G-banding slide, in the preparation of a chromosome detection product.
Compared with the prior art, the beneficial effects of this application are:
1. the treatment method can carry out molecular fluorescence in-situ hybridization on the G-banding slide, avoid repeatedly collecting bone marrow fluid and reduce pain caused by patient puncture. And for patients with less bone marrow fluid taking amount, dry pumping or need to do a plurality of detection items caused by certain diseases, the sample amount is saved, and the detection items are enlarged.
2. The method can make up for the defect of performing karyotyping analysis by conventional banding, and can detect microdeletion or hidden translocation.
3. The application realizes the reutilization of the waste glass slide of the G-developing glass slide, and further expands the sample possibility of biological detection.
Drawings
FIG. 1 is a graph showing the results of Acute Lymphoblastic Leukemia (ALL) in example 1. Wherein, FIG. 1A shows the G-banding result, and FIG. 1B shows the hybridization microscopic examination result of TEL/AML1 bicolor ES probe on the G-banding slide: 85% of the cells had a TEL gene deletion.
FIG. 2 is a graph showing the results of Acute Myeloid Leukemia (AML) in example 2. Wherein, FIG. 2A shows the G-banding result, and FIG. 2B shows the hybridization microscopic examination result of AML1/ETO double-color double-fusion probe on the G-banding slide: 88% of the cells have AML1/ETO fusion genes present and have three or more chromosomal complex translocations.
FIG. 3 is a graph showing the results of high grade B cell lymphoma (HGBL) of example 3. Wherein, FIG. 3A is the G-banding result, and FIG. 3B is the hybridization microscopy result of MYC and BCL2 two-color separation probe on the G-banding slide: 92% MYC gene rearrangement and 90% bcl2 gene rearrangement.
FIG. 4 is a graph showing the results of Chronic Lymphocytic Leukemia (CLL) of example 4. Wherein, FIG. 4A shows the G-banding result, and FIG. 4B shows the hybridization microscopy result of D13S25 monochromatic probe on the G-banding slide: 89% of the D13S25 gene was deleted.
Detailed Description
In order to make the objects, technical solutions and advantageous effects of the present application clearer, the present application is further described below with reference to examples. It should be understood that the examples are presented by way of illustration only and are not intended to limit the scope of the application. The test methods used in the following examples are conventional, unless otherwise indicated, and other advantages and effects of the present application will be readily apparent to those skilled in the art from the disclosure herein.
The inventors of the present application have found a treatment method for performing molecular fluorescence in situ hybridization on a G-banded slide through extensive research and study, and completed the present application on the basis of the treatment method. The treatment method can carry out molecular fluorescence in-situ hybridization on the G-banding slide, avoid repeatedly collecting bone marrow fluid and reduce pain caused by patient puncture. And for patients with less bone marrow fluid taking amount, dry pumping or need to do a plurality of detection items caused by certain diseases, the sample amount is saved, and the detection items are enlarged.
In one aspect, the present application provides a method for performing molecular fluorescence in situ hybridization on a G-banded slide, comprising the steps of:
1) Immersing the G-tape slide in an organic solvent, immersing and washing the G-tape slide in a fixing solution and immersing the G-tape slide in a buffer solution;
2) Dehydrating and drying the G-banding slide processed in the step 1), adding a probe for hybridization reaction, washing the slide, drying, and adding a coloring agent for microscopic examination.
In the treatment method provided by the application, the step 1) refers to immersing the G-tape slide in an organic solvent, immersing in a fixing solution, and immersing in a buffer solution. Wherein the organic solvent comprises one or more of xylene, diethyl ether and ethanol. The organic solvent serves to remove the microscope oil from the G-tape slide. The time for immersing the organic solvent is 1-3 min; specifically, the time period may be 1 to 2 minutes or 2 to 3 minutes.
In the step 1), the fixing solution comprises methanol and glacial acetic acid; further, the volume ratio of methanol to iceethanol is 3:1. the addition amount of the fixing liquid is based on the immersion of the G-tape slide; preferably, the amount of the fixative to be added to each G-tape slide is 40 to 50mL. In some embodiments, the fixative dip may be dip washed 3 times. The fixing solution is used for cleaning the organic solvent and removing the color on the G-band slide.
In step 1), the buffer is selected from SSC, HEPES, SSPE, PIPES, TMAC, TRIS, SET, potassium phosphate, citric acid, or sodium pyrophosphate. The concentration of the buffer solution is 0.5-50 x; preferably, the concentration of the buffer is 2x. In one embodiment of the present application, the buffer is SSC at 2x. SSC is composed of 0.03M trisodium citrate C 6 H 5 Na 3 O 7 ·2H 2 O and 0.3M NaCl. The buffer solution needs to be preheated before use; preferably, the temperature of the preheating is 37 ℃. The buffer is immersed in a kohlrabi jar. The time for immersing the buffer solution is 30-40 min; specifically, the time period may be 30 to 35 minutes, 35 to 38 minutes, 38 to 40 minutes, or the like. The effect of the buffer addition is to age the G-tape slide, which helps to preserve the morphology of the cells.
In step 1), dehydration is carried out by soaking in ethanol with different concentrations. The concentration of ethanol is selected from 70% (v/v), 85% (v/v), or 100% (v/v). Dewatering, namely soaking in the ethanol with low concentration to the ethanol with high concentration in sequence; when dehydrating, soaking in ethanol with each concentration for 2-5 min. In one embodiment of the present application, dehydration is performed by immersing the G-tape slide in 70%,85% and 100% alcohol for 2 minutes each.
In the processing method provided by the application, the step 2) refers to that the G-banding glass slide processed in the step 1) is dehydrated and dried, a probe is added for hybridization reaction, the glass slide is dried after being washed, and a coloring agent is added for microscopic examination. Wherein, in the step 2), the probe is selected from one or a combination of a plurality of TEL/AML1, AML1/ETO, MYC, BCL-2 and D13S 25.
In the step 2), the melting temperature of the hybridization reaction is 72-95 ℃; specifically, the temperature may be 72 to 85 ℃,85 to 92 ℃, 92 to 95 ℃, or the like. The melting time of the hybridization reaction is 2-5 min; specifically, the time period may be 2 to 3 minutes, 3 to 4 minutes, or 4 to 5 minutes. In the hybridization reaction, the melting temperature is insufficient, the denaturation is insufficient, the hybridization rate is low, and the signal is weak; too high a temperature may lead to erosion of the nucleus. The melting temperature of the hybridization reaction of the application is slightly higher than that of the conventional FISH, and the denaturation temperature of the conventional FISH Vysis probe in the specification is 72 ℃.
In step 2), the film is washed with an eluent including SSC and NP40. In some embodiments, the washing comprises two elution steps, a first elution and a second elution, respectively. The eluent used in the first elution is 0.4 XSSC/0.3% NP-40 eluent, the first elution is carried out in a water bath kettle, the temperature of the water bath kettle is 72+/-1 ℃ water bath kettle, and the first elution time is 2min. The second elution was performed at room temperature using 2 XSSC/0.1% NP-40 eluent for a second elution time of 1min. The purpose of the elution in two steps is to wash away excess unbound and non-specifically bound probe fragments, effectively reducing the hybridization background. .
In step 2), the drying is performed in the dark, since the fluorescent signal in the probe cannot be exposed, otherwise the fluorescent signal is quenched.
In step 2), the staining agent is selected from DAPI. The stain is used to stain cells for ease of observation under a microscope.
In step 2), the proportion of positive cells was counted by microscopic examination.
In another aspect, the present application provides a G-tape slide, which is processed by the aforementioned processing method. The G-tape slide processed by the method can be combined with the FISH detection characteristic, so that the reutilization of waste glass of the G-tape slide is realized, and the possibility of a biological detection sample is further enlarged.
In another aspect, the present application provides the use of the aforementioned treatment method, or the aforementioned G-tape slide, in the preparation of a chromosome detection product. According to the method, the defect of nuclear analysis of the conventional tape can be overcome by carrying out the FISH detection on the G-tape slide, the subtle deletion or hidden translocation is detected, the repeated collection of bone marrow fluid is avoided, and the pain brought to patient puncture is reduced. And for patients with less bone marrow fluid taking amount, dry pumping or need to do a plurality of detection items caused by certain diseases, the sample amount is saved, and the detection items are enlarged.
The present application is further illustrated by the following examples, which are not intended to limit the scope of the present application.
Example 1
Acute Lymphoblastic Leukemia (ALL): as shown in FIG. 1A, the conventional banding nuclear analysis suspected of chromosome 12 structural abnormalities, and no cell suspension remained, was used for molecular fluorescence in situ hybridization with a G-banding slide, as follows:
1) Taking a G-banding slide;
2) The slide was put in xylene to remove the microscope oil and immersed for 2 minutes;
3) Preparing 160ml of 3:1 methanol/glacial acetic acid fixing solution;
4) Preheating 2 XSSC in a water bath kettle at 37 ℃;
5) Removing xylenes from the slide but preventing the slide from drying out;
6) The slides were placed on small petri dishes and rinsed with 3:1 fixative for 2 minutes;
7) Pouring the fixing liquid out, and then pouring fresh fixing liquid for washing for 3 times;
8) The slide was placed in a Colprin cylinder of 2 XSSC at 37℃for 30 minutes;
9) Soaking the slide in 70%,85% and 100% ethanol for 2min, dehydrating, and air drying;
10 Adding probe TEL/AML1 (Vysis LSI ETV6 (TEL)/RUNX 1 (AML 1) ESDual Color Translocation Probe), hybridizing in a hybridization instrument, and selecting a procedure of denaturation at 85 ℃ for 2 minutes and hybridization at 37 ℃ for 10-18 hours;
11 Film-washing: a water bath kettle at 72+/-1 ℃, 0.4 XSSC/0.3% NP-40 eluent, and gently soaking and washing for 2 minutes, and 2 XSSC/0.1% NP-40 eluent at room temperature and gently soaking and washing for 1 minute;
12 Taking out the slide, naturally drying in dark, adding DAPI staining solution, performing microscopic examination, and counting the proportion of positive cells.
The results are shown in FIG. 1B, which shows the results of hybridization microscopy of TEL/AML1 bicolor ES probes on a G-tape slide: 85% of the cells had a TEL gene deletion.
Example 2
Acute Myeloid Leukemia (AML): as shown in fig. 2A, a conventional banding pattern analysis suspected of complex three-position chromosomal translocations, and no cell suspension remained, was performed using G-banding slides and molecular fluorescence in situ hybridization as follows:
1) Taking a G-banding slide;
2) The slide was put in xylene to remove the microscope oil and immersed for 2 minutes;
3) Preparing 160ml of 3:1 methanol/glacial acetic acid fixing solution;
4) Preheating 2 XSSC in a water bath kettle at 37 ℃;
5) Removing xylenes from the slide but preventing the slide from drying out;
6) The slides were placed on small petri dishes and rinsed with 3:1 fixative for 2 minutes;
7) Pouring the fixing liquid out, and then pouring fresh fixing liquid for washing for 3 times;
8) The slide was placed in a Colprin cylinder of 2 XSSC at 37℃for 30 minutes;
9) Soaking the slide in 70%,85% and 100% ethanol for 2min, dehydrating, and air drying;
10 Probe AML1/ETO (Vysis LSI AML1/ETO Dual Color, dual Fusion Translocation Probe) was added and hybridized in a hybridization apparatus using a melting procedure of 85 ℃/2 minutes;
11 Film-washing: a water bath kettle at 72+/-1 ℃, 0.4 XSSC/0.3% NP-40 eluent, and gently soaking and washing for 2 minutes, and 2 XSSC/0.1% NP-40 eluent at room temperature and gently soaking and washing for 1 minute;
12 Taking out the slide, naturally drying in dark, adding DAPI staining solution, performing microscopic examination, and counting the proportion of positive cells.
The results are shown in FIG. 2B, which shows the results of hybridization microscopy of AML1/ETO bicolor dual-fusion probes on a G-tape slide: 88% of the cells have AML/ETO fusion genes present and have three or more chromosomal complex translocations.
Example 3
High grade B cell lymphoma (HGBL): as shown in FIG. 3A, conventional banding pattern analysis suspected of MYC and BCL2 gene locus abnormalities, and no cell suspension remained, using a G-banding slide as MYC and BCL2 rearrangement probes.
1) Taking two G-banding slides;
2) The slide was put in xylene to remove the microscope oil and immersed for 2 minutes;
3) Preparing 160ml of 3:1 methanol/glacial acetic acid fixing solution;
4) Preheating 2 XSSC in a water bath kettle at 37 ℃;
5) Removing xylenes from the slide but preventing the slide from drying out;
6) The slides were placed on small petri dishes and rinsed with 3:1 fixative for 2 minutes;
7) Pouring the fixing liquid out, and then pouring fresh fixing liquid for washing for 3 times;
8) The slide was placed in a Colprin cylinder of 2 XSSC at 37℃for 30 minutes;
9) Soaking the slide in 70%,85% and 100% ethanol for 2min, dehydrating, and air drying;
10 Two slides were hybridized with probes MYC (Vysis LSIMYC Dual Color, break Apart Rearrangement Probe) and BCL2 (Vysis LSI BCL2 Dual Color, break Apart Rearrangement Probe), respectively, using a melting procedure of 85 ℃/2 minutes in a hybridization apparatus;
11 Film-washing: a water bath kettle at 72+/-1 ℃, 0.4 XSSC/0.3% NP-40 eluent, and gently soaking and washing for 2 minutes, and 2 XSSC/0.1% NP-40 eluent at room temperature and gently soaking and washing for 1 minute;
12 Taking out the slide, naturally drying in dark, adding DAPI staining solution, performing microscopic examination, and counting the proportion of positive cells.
The results are shown in FIG. 3B, which shows the results of hybridization microscopy of MYC and BCL2 two-color separation probes on a G-tape slide: 92% MYC gene rearrangement and 90% BCL2 gene rearrangement.
Example 4
Chronic Lymphocytic Leukemia (CLL): as shown in FIG. 4A, the conventional banding pattern analysis had only 3 split phases, few split phases, and no cell suspension remained, and the G-banding slide was used as the D13S25 probe.
1) Taking a G-banding slide;
2) The slide was put in xylene to remove the microscope oil and immersed for 2 minutes;
3) Preparing 160ml of 3:1 methanol/glacial acetic acid fixing solution;
4) Preheating 2 XSSC in a water bath kettle at 37 ℃;
5) Removing xylenes from the slide but preventing the slide from drying out;
6) The slides were placed on small petri dishes and rinsed with 3:1 fixative for 2 minutes;
7) Pouring the fixing liquid out, and then pouring fresh fixing liquid for washing for 3 times;
8) The slide was placed in a Colprin cylinder of 2 XSSC at 37℃for 30 minutes;
9) Soaking the slide in 70%,85% and 100% ethanol for 2min, dehydrating, and air drying;
10 Adding probe D13S25 (Vysis LSID13S25 (13 q 14) SpectrumOrange Probe), hybridizing in a hybridization instrument, and adopting a melting program of 85 ℃/2 minutes;
11 Film-washing: a water bath kettle at 72+/-1 ℃, 0.4 XSSC/0.3% NP-40 eluent, and gently soaking and washing for 2 minutes, and 2 XSSC/0.1% NP-40 eluent at room temperature and gently soaking and washing for 1 minute;
12 Taking out the slide, naturally drying in dark, adding DAPI staining solution, performing microscopic examination, and counting the proportion of positive cells.
The results are shown in FIG. 4B, which shows the hybridization microscopy results of D13S25 single-color probes on G-tape slides: 89% of the D13S25 gene was deleted.
In conclusion, the treatment method can carry out molecular fluorescence in-situ hybridization on the G-banding slide, avoid repeatedly collecting bone marrow fluid and reduce pain caused by patient puncture. And for patients with less bone marrow fluid taking amount, dry pumping or need to do a plurality of detection items caused by certain diseases, the sample amount is saved, and the detection items are enlarged. The method can make up for the defect of performing karyotyping analysis by conventional banding, and can detect microdeletion or hidden translocation. The application realizes the reutilization of the waste glass slide of the G-developing glass slide, and further expands the sample possibility of biological detection.
The above embodiments are merely illustrative of the principles of the present invention and its effectiveness, and are not intended to limit the application. Modifications and variations may be made to the above-described embodiments by those of ordinary skill in the art without departing from the spirit and scope of the present application. Accordingly, it is intended that all equivalent modifications and variations which can be accomplished by persons skilled in the art without departing from the spirit and technical spirit of the present disclosure shall be covered by the claims of this application.
Claims (10)
1. A method of performing molecular fluorescence in situ hybridization on a G-banded slide, comprising the steps of:
1) Immersing the G-tape slide in an organic solvent, immersing and washing the G-tape slide in a fixing solution and immersing the G-tape slide in a buffer solution;
2) Dehydrating and drying the G-banding slide processed in the step 1), adding a probe for hybridization reaction, washing the slide, drying, and adding a coloring agent for microscopic examination.
2. The process according to claim 1, wherein in step 1), the time of immersion of the organic solvent is 1 to 3 minutes;
and/or, in step 1), the organic solvent comprises one or more of xylene, diethyl ether, ethanol.
3. The process of claim 1, wherein in step 1), the fixative solution comprises methanol and glacial acetic acid;
further, the volume ratio of the methanol to the glacial ethanol is 3:1, a step of;
and/or, the fixing liquid submerges the G-tape slide; preferably, the fixative solution is 40-50 mL for each G-tape slide.
4. The method of claim 1, wherein in step 1), the buffer is selected from SSC, HEPES, SSPE, PIPES, TMAC, TRIS, SET, potassium phosphate, citric acid, or sodium pyrophosphate;
and/or, in the step 1), the concentration of the buffer solution is 0.5-50 x; preferably, the concentration of the buffer is 2x;
and/or, in step 1), the buffer solution needs to be preheated before use; preferably, the temperature of the preheating is 37 ℃;
and/or, in the step 1), immersing the buffer solution in a Columba cylinder;
and/or, in the step 1), the time for immersing the buffer solution is 30-40 min.
5. The process of claim 1, wherein in step 2) the dehydration is soaking in ethanol of different concentrations;
preferably, the concentration of ethanol is selected from 70% (v/v), 85% (v/v), or 100% (v/v); the dehydration is carried out by soaking in the ethanol with low concentration to the ethanol with high concentration in sequence; when dehydrating, soaking in ethanol with each concentration for 2-5 min.
6. The method of claim 1, wherein in step 2) the probe is selected from the group consisting of one or more of TEL/AML1, AML1/ETO, MYC, BCL2, D13S 25.
7. The method according to claim 1, wherein in step 2), the melting temperature of the hybridization reaction is 72 to 95 ℃; the melting time of the hybridization reaction is 2-5 min.
8. The process of claim 1, wherein in step 2) the film is washed with an eluent comprising SSC and NP40;
and/or, in step 2), the drying is performed in the dark;
and/or, in step 2), the staining agent is selected from DAPI;
and/or, in step 2), the proportion of positive cells is counted by microscopic examination.
9. A G-tape slide treated by the treatment method according to any one of claims 1 to 8.
10. Use of the treatment method according to any one of claims 1 to 8, or the G-banding slide according to claim 9, in the preparation of a chromosome detection product.
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202311179445.6A CN117247995A (en) | 2023-09-12 | 2023-09-12 | Method for carrying out molecular fluorescence in-situ hybridization treatment on G-banding glass slide |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202311179445.6A CN117247995A (en) | 2023-09-12 | 2023-09-12 | Method for carrying out molecular fluorescence in-situ hybridization treatment on G-banding glass slide |
Publications (1)
Publication Number | Publication Date |
---|---|
CN117247995A true CN117247995A (en) | 2023-12-19 |
Family
ID=89127312
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CN202311179445.6A Pending CN117247995A (en) | 2023-09-12 | 2023-09-12 | Method for carrying out molecular fluorescence in-situ hybridization treatment on G-banding glass slide |
Country Status (1)
Country | Link |
---|---|
CN (1) | CN117247995A (en) |
Citations (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5817462A (en) * | 1995-02-21 | 1998-10-06 | Applied Spectral Imaging | Method for simultaneous detection of multiple fluorophores for in situ hybridization and multicolor chromosome painting and banding |
CN102046808A (en) * | 2008-05-27 | 2011-05-04 | 丹麦达科有限公司 | Compositions and methods for detection of chromosomal aberrations with novel hybridization buffers |
CN106480204A (en) * | 2016-11-08 | 2017-03-08 | 南通大学附属医院 | A kind of fluorescence in-situ hybridization method of improvement and its application |
CN111004838A (en) * | 2019-12-30 | 2020-04-14 | 武汉大学 | Application of bone marrow smear fluorescence in situ hybridization technology in multiple myeloma |
-
2023
- 2023-09-12 CN CN202311179445.6A patent/CN117247995A/en active Pending
Patent Citations (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5817462A (en) * | 1995-02-21 | 1998-10-06 | Applied Spectral Imaging | Method for simultaneous detection of multiple fluorophores for in situ hybridization and multicolor chromosome painting and banding |
CN102046808A (en) * | 2008-05-27 | 2011-05-04 | 丹麦达科有限公司 | Compositions and methods for detection of chromosomal aberrations with novel hybridization buffers |
CN106480204A (en) * | 2016-11-08 | 2017-03-08 | 南通大学附属医院 | A kind of fluorescence in-situ hybridization method of improvement and its application |
CN111004838A (en) * | 2019-12-30 | 2020-04-14 | 武汉大学 | Application of bone marrow smear fluorescence in situ hybridization technology in multiple myeloma |
Non-Patent Citations (4)
Title |
---|
J W HOU等: "Chromosomal rearrangements detected by FISH and G-banding", 《J FORMOS MED ASSOC》, vol. 95, no. 9, 30 September 1996 (1996-09-30), pages 686 - 691 * |
伍俊萍等: "染色体G显带结合荧光原位杂交技术检测原发闭经患者性染色体异常的价值", 《中国实用妇科与产科杂志》, no. 11, 2 November 2007 (2007-11-02), pages 864 - 866 * |
夏建川等: "G显带染色体脱色FISH技术在识别胃癌标记染色体中的应用", 《中华医学遗传学杂志》, no. 04, 26 August 2000 (2000-08-26), pages 1 * |
黄浩杰,张锡然,陈宜峰,崔英霞: "应用G显带染色体荧光原位杂交(FISH)技术研究复杂的染色体易位", 遗传学报, no. 05, 10 October 1996 (1996-10-10), pages 338 - 342 * |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
US11254974B2 (en) | RNA fixation and detection in clarity-based hydrogel tissue | |
WO1997014026A2 (en) | Method for detecting multiple copies of a repeat sequence in a nucleic acid molecule | |
Cuneo et al. | Fluorescence in situ hybridization for the detection and monitoring of the Ph-positive clone in chronic myelogenous leukemia: comparison with metaphase banding analysis | |
Spathas et al. | Prenatal detection of trisomy 21 in uncultured amniocytes by fluorescence in situ hybridization: a prospective study | |
CN110257483B (en) | Hybridization solution for in situ hybridization, preparation method thereof and detection kit | |
US20160355890A1 (en) | Cell preparations and cell supports and their use in theranosis | |
JP6284487B2 (en) | Materials and methods for diagnosis of bladder cancer and monitoring of its recurrence | |
Jobin et al. | The persistence of seminal constituents on panties after laundering. Significance to investigations of sexual assault | |
CN117247995A (en) | Method for carrying out molecular fluorescence in-situ hybridization treatment on G-banding glass slide | |
Meng et al. | Fluorescence in situ hybridization analysis of chromosome 12 anomalies in semen cells from patients with carcinoma in situ of the testis | |
Scheres | CT banding of human chromosomes: description of the banding technique and some of its modifications | |
CA2422440C (en) | Oligonucleotide sequence formula for labeling oligonucleotide probes and proteins for in situ analysis | |
CN109975095A (en) | A kind of pretreatment liquid and pre-treating method of fluorescence in situ hybridization | |
Ghaleb et al. | Aberrations of chromosomes 9 and 17 in bilharzial bladder cancer as detected by fluorescence in situ hybridization | |
US9469877B2 (en) | Materials and methods for diagnosis, prognosis, monitoring of recurrence, and assessment of therapeutic/prophylactic treatment of pancreatobiliary cancer | |
CN107083418B (en) | PML/RAR alpha fusion gene detection kit and detection method | |
Fonatsch et al. | Classical and molecular cytogenetics | |
CN109536582A (en) | A kind of novel lung cancer c-MET gene magnification detection method and kit | |
Kitayama et al. | Repeated fluorescence in situ hybridization by a microwave‐enhanced protocol | |
CN112575066A (en) | Processing method for bone marrow smear FISH detection | |
CN114645076B (en) | miR-589-3p horizontal in-situ hybridization detection kit and detection method | |
Jalal et al. | Detection of Newborn Aneuploidy by Interphase Fluorescence In Situ Hybridizationz | |
RU2490635C1 (en) | Improved method for producing dead cell preparations for fluorescent in situ hybridisation | |
Cowles et al. | Identification of abnormal chromosomal complement in formalin‐fixed, paraffin‐embedded placental tissue | |
CN112251498B (en) | Pretreatment liquid, kit and pretreatment method for cell sample fluorescence in situ hybridization |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
PB01 | Publication | ||
PB01 | Publication | ||
SE01 | Entry into force of request for substantive examination | ||
SE01 | Entry into force of request for substantive examination |