CN113528533B - Limonium bicolor gene LbRSG and application thereof - Google Patents
Limonium bicolor gene LbRSG and application thereof Download PDFInfo
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Abstract
The invention provides a Limonium bicolor gene LbRSG and application thereof. The gene LbRSG is obtained by cloning from limonium bicolor of a salivation halophyte, the total length of mRNA of the gene LbRSG is 669bp, 222 amino acids are coded, and the gene LbRSG shows high expression in the growth period of the salt gland. In situ hybridization shows that LbRSG can be directly related to the development of saline glands, and the function of LbRSG genes is further verified by using knockout and overexpression technologies. The results show that the knock-out of LbRSG effectively causes the number of light-emitting points of the salt gland to be reduced to 3 compared with 4 light-emitting points of the salt gland possessed by the wild type; the over-expression strain shows 8-9 luminous points, which shows that the LbRSG participates in the differentiation of the salt gland and plays a positive regulation role in the development process of the salt gland. The invention lays a foundation for the research of the LbRSG gene participating in the bicolor limonium salt gland development and the salt resistance mechanism.
Description
Technical Field
The invention relates to the field of plant genetic engineering, in particular to a limonium bicolor gene LbRSG and application thereof.
Background
The salinization of soil seriously threatens grain production, the area of saline-alkali soil is increased year by year due to factors such as drought, unreasonable irrigation and the like, and the development and utilization of the saline-alkali soil to ensure the safety of grains and energy becomes a hotspot and a difficulty of the current world research. Practice shows that exploring the molecular mechanism of plant salt resistance and utilizing modern biotechnology to cultivate salt-tolerant crops is a fundamental strategy for developing and utilizing saline-alkali soil. The halophytes are divided into three types of salt accumulation, salt rejection and salt secretion according to a salt-resistant strategy, wherein the salt secretion halophytes have a unique salt secretion structure (salt glands) and can be morphologically distinguished from other halophytes and all non-halophytes, and excessive Na accumulated in the plants can be removed + Directly discharged out of the body, thereby effectively avoiding salt damage. Thus, the molecular mechanisms underlying the development of the salt glands are particularly useful for the heterologous transformation of non-halophytesThe compound has important significance for improving the salt resistance of the compound.
Disclosure of Invention
The invention aims to provide a Limonium bicolor gene LbRSG and application thereof.
In order to achieve the object of the present invention, in a first aspect, the present invention provides limonium bicolor gene LbRSG, which is a gene encoding the following protein (a) or (b):
(a) 1, a protein consisting of an amino acid sequence shown in SEQ ID NO; or
(b) 1, protein which is derived from (a) and has the same function by substituting, deleting or adding one or more amino acids in the sequence shown in SEQ ID NO. 1.
According to the three-generation full-length transcription group information, the mRNA full length 669bp of LbRSG is obtained by cloning from Limonium bicolor, 222 amino acids are coded, high expression is shown in the salt gland development period, and the onion subcellular cell shows that the LbRSG is positioned on a cell plasma membrane. Bioinformatic analysis shows that the gene encodes a hydrophilic protein, a double-transmembrane domain exists, the outer part of the membrane occupies 64 percent (141 amino acids) to form 1 large extracellular loop, the continuous negatively charged domain possibly participates in ion response, and the C end in the membrane has phosphorylation sites of threonine and serine, so that intracellular enzyme-linked reaction can be caused by phosphorylation. The gene is directly located on the salt gland through in situ hybridization, and the suggestion is that the gene is possibly closely related to the development of the salt gland.
In a second aspect, the invention provides a limonium bicolor gene LbRSG promoter, the sequence of which is: i) A nucleotide sequence shown as SEQ ID NO. 2; or ii) a nucleotide sequence with one or more nucleotides substituted, deleted and/or added and the same function as the nucleotide sequence shown in SEQ ID NO. 2; or iii) a nucleotide sequence which hybridizes with the sequence shown in SEQ ID NO. 2 and has the same function under stringent conditions in a 0.1 XSSPE containing 0.1% SDS or a 0.1 XSSC solution containing 0.1% SDS, at 65 ℃ and washing the membrane with the solution; or iv) a nucleotide sequence having more than 90% homology with the nucleotide sequence of i), ii) or iii) and having the same function.
In a third aspect, the invention provides a biological material containing said gene LbRSG or said promoter, including but not limited to recombinant DNA, expression cassettes, transposons, plasmid vectors, viral vectors, engineered bacteria or non-regenerable plant parts.
In a fourth aspect, the invention provides an application of the promoter in regulating and controlling the expression of downstream genes, wherein the downstream genes include but are not limited to genes LbRSG, reporter genes GUS, GFP and the like.
In a fifth aspect, the invention provides the use of the gene LbRSG, the promoter or a biological material containing the gene LbRSG or the promoter in the preparation of a transgenic plant.
In a sixth aspect, the present invention provides any one of the following uses of the gene LbRSG or a biological material containing the gene LbRSG: the preparation method is used for regulating and controlling the growth and development of salt glands of salt secreting plants; (2) the plant variety improvement.
Preferably, the plant is Limonium bicolor.
The modulation is positive modulation, such as positive modulation of the diameter of the salt gland, the number of salt gland cells, and the like.
In a seventh aspect, the invention provides a method for reducing the diameter of limonium bicolor salt glands, reducing the number of salt gland cells and abnormal salt gland development, which utilizes a genetic engineering means to weaken a limonium bicolor gene LbRSG to obtain a genetic weakening strain; the attenuation comprises knocking out or reducing expression of the gene.
Preferably, the genetic engineering means may be selected from one of mutagenesis, site-directed mutagenesis, homologous recombination, and the like.
Further, a sgRNA sequence based on CRISPR/Cas9 is designed aiming at a target gene LbRSG in limonium bicolor, a DNA fragment containing the sgRNA sequence is connected to a vector carrying the CRISPR/Cas to transform the limonium bicolor, and then a transgenic plant with the gene function deficiency is obtained.
Preferably, the nucleotide sequence of the sgRNA action site is 5-.
In an eighth aspect, the present invention provides a method for promoting the development of plant salt gland (including the enlargement of the diameter of salt gland and the increase of the number of salt gland cells), which is selected from the following (1) or (2): (1) allowing the plant to express a protein encoded by the gene LbRSG; (2) overexpresses the gene LbRSG in plants.
Preferably, the plant is a salivation plant, more preferably Limonium bicolor.
The mode of overexpression is selected from the following 1) to 5), or optional combination:
1) By introducing a plasmid having the gene; 2) By increasing the copy number of the gene on the plant chromosome; 3) By altering the promoter sequence of said gene on the plant chromosome;
4) By operably linking a strong promoter to the gene; 5) By introducing an enhancer.
In a ninth aspect, the present invention provides any one of the following uses of the transgenic plant obtained according to the above method: i. for plant breeding; and ii, the method is used for planting in saline-alkali soil.
Such breeding methods include, but are not limited to, transgenics, crosses, backcrosses, selfs, or asexual propagation.
The gene LbRSG is cloned from Limonium bicolor for the first time and the biological function of the gene LbRSG is analyzed, the gene is highly expressed in the salt gland development period, in-situ hybridization shows that the LbRSG can be directly related to the salt gland development, and the function of the LbRSG gene is further verified by adopting knockout and overexpression technologies. An LbRSG knockout carrier is constructed by using a CRISPR/Cas9 gene editing technology, lbRSG silent mutant LbRSG is obtained through a Limonium bicolor genetic transformation system, and the development condition of the LbRSG salt gland is determined by adopting a method that the salt gland has blue autofluorescence under ultraviolet excitation light. Compared with wild four-light-point salt gland, the LbRSG silent line LbRSG has a large number of three-light-point salt glands, which indicates that the knockout of LbRSG effectively causes salt gland dysplasia. Meanwhile, a 35S over-expression vector is constructed, and after the over-expression vector is infected by agrobacterium, an over-expression strain OE is obtained by screening, the over-expression strain is expressed by 8-9 luminous points, which indicates that LbRSG participates in the differentiation of salt glands and plays a positive regulation role in the development process of the salt glands. Through the phenotype observation of LbRSG gene knockout strains, it is determined that LbRSG plays a positive regulation role in the salt gland development process.
Drawings
FIG. 1 shows the result of PCR amplification of LbRSG gene in a preferred embodiment of the present invention, wherein 1-8 is LbRSG gene, M: DNA Marker 2000.
FIG. 2 shows the primary structure of LbRSG protein in a preferred embodiment of the present invention.
FIG. 3 is a diagram showing the analysis of the transmembrane domain of LbRSG protein in a preferred embodiment of the present invention.
FIG. 4 shows the prediction of phosphorylation sites of LbRSG protein in a preferred embodiment of the present invention.
FIG. 5 shows the relative expression levels of LbRSG gene in Limonium bicolor treated at different times in a preferred embodiment of the invention. 3 replicates were set for each experimental group, with different lower case letters representing significant differences at the p =0.05 level.
FIG. 6 is an electrophoresis diagram of 1st, 2nd and 3rd PCR products using LbRSG 5SPs and APs as primers in a preferred embodiment of the present invention. The inner circle is the destination strip. M1, lambda-Hind III digest;1-3,AP1 1st 2nd 3rd PCR product; 4-6,AP2 1st 2nd 3rd PCR product; 7-9,AP3 1st 2nd 3rd PCR product; 10-12,AP4 1st 2nd 3rd PCR product; 13-15, positive control 1st 2nd 3rd PCR product; m2, DL2,000DNA marker.
FIG. 7 shows the LbRSG gene promoter sequence in a preferred embodiment of the invention. The black part is the promoter sequence and the grey part is the CDS sequence.
FIG. 8 shows the analysis of LbRSG promoter elements in a preferred embodiment of the present invention.
FIG. 9 shows the result of agarose gel electrophoresis in a preferred embodiment of the invention. Wherein, (A) the double digestion recovery result, M2: DL15000DNA Marker;1, pCAMBIA3301;2, after enzyme digestion, hindIII/Nco I is used for purifying a product; m1: DNA Marker 2000; (B) An electrophoresis picture of LbRSG gene promoter clone, M1: DL5,000DNA Marker; (C) PCR result of pCAMBIA3301-LbRSG promoter Escherichia coli colony, M: DL5,000DNA Marker; (D) pCAMBIA3301-LbRSG promoter Agrobacterium colony PCR, M: DL5,000DNA Marker.
FIG. 10 is a diagram of the selection of Arabidopsis thaliana positive seedlings by the herbicide BASTA in a preferred embodiment of the present invention.
FIG. 11 is an electrophoresis diagram of PCR products using heterologous expression strain DNA as a template in a preferred embodiment of the present invention. M: DNA Marker with standard molecular weight of 2000.
FIG. 12 shows GUS color analysis results of LbRSG promoter at different positions of seedling in the preferred embodiment of the present invention. (A) GUS color analysis result of young leaf promoter; (B) GUS color analysis result of the vein promoter of the young leaf; (C) GUS color development analysis results of promoters in the root hair generation region of young leaves; (D, E, F) the result of GUS color analysis of the promoter at the root-tuber junction; (G) GUS color analysis result of young leaf root hair promoter; (H) GUS color analysis results of the young leaf main root tip promoter; (I) And (5) performing color analysis on GUS (glucuronidase) of the root tip promoter of the young leaf side root.
FIG. 13 is a diagram of a sequence of an exon defining a primer that does not span an intron in a preferred embodiment of the invention.
Fig. 14 shows agarose gel electrophoresis results of CRISPR vector construction and agrobacterium transformation in a preferred embodiment of the invention.
FIG. 15 shows the preferred embodiment of the present invention wherein Agrobacterium infects Limonium bicolor leaf and CRISPR-Cas9 knock-out vector infects leaf. Wherein, B, 7 days after the bicolor limonium major root is infected; C. and D, screening the limonium bicolor regenerated buds by the hygromycin.
FIG. 16 shows the regenerated adventitious shoots and adventitious roots after 20 days of the selection culture in the preferred embodiment of the present invention. Wherein (A) the carrier is knocked out to screen regenerated adventitious buds and adventitious roots after 20 days of culture; (B) the new shoots are screened lethal by hygromycin; (C) transgenic regeneration lines.
FIG. 17 shows the salt gland phenotype of Limonium bicolor Lbrsgg 1 knock-out and overexpression lines in a preferred embodiment of the invention. WT: scale =10 μm. Lbrsg1: scale =5 μm; OE: the number of bicolor limonium (LbRSG 1) salt gland constitutional cells after LbrSG1 knockout is obviously reduced by the CRISPR, the number of salt gland constitutional cells of an over-surface strain (OE) is obviously increased, the salt gland is in a sole shape, an arrow mark shows the position of a luminous point, and the luminous point is consistent with the number of a salt secreting hole.
FIG. 18 shows the salt gland phenotype of Limonium bicolor LbRSG1 overexpression strain in a preferred embodiment of the invention. Wherein, (A) 5 luminous point salt gland; (B) 7 luminescence point saline gland; (C) 8 luminescence point saline gland.
FIG. 19 is the result of subcellular localization analysis of onion epidermal cells with LbRSG-GFP in the preferred embodiment of the present invention. The GFP-LbRSG fusion was expressed in the cytoplasmic membrane, as well as in the control cytoplasm. 35S, GFP is an empty vector. DAPI with blue fluorescence specificity indicates the location of the nucleus, and FM4-64 with red fluorescence specificity indicates the location of the plasma membrane. (left: bar =75 μm, right: bar =100 μm).
Detailed Description
The following examples are intended to illustrate the invention, but are not intended to limit the scope of the invention. Unless otherwise indicated, the examples follow conventional experimental conditions, such as the Molecular Cloning handbook, sambrook et al (Sambrook J & Russell DW, molecular Cloning: a Laboratory Manual, 2001), or the conditions as recommended by the manufacturer's instructions.
Statistical analysis methods used in the following examples: statistical significance of P =0.05 (Duncan multiple range test) was determined using SPSS. Analysis of variance and orthogonal control and mean comparison programs were used to detect significant differences between different treatments.
Example 1 full-Length cloning of LbRSG Gene and bioinformatic analysis
Through the second generation transcriptome information of early salt gland development, 1 transmembrane protein gene Lb1G01054 with unknown function is screened, has high expression in the salt gland development period, and the function of the gene in the bichromal limonium salt gland development is researched. The experiment shows that the Salt Gland of the CRISPR knocking bicolor limonium mutant is obviously Reduced, so the gene is named LbRSG (Reduced Salt land).
The full-length LbRSG gene cDNA is cloned by taking the true leaves of Limonium bicolor at the A stage and the B stage as materials by referring to the full-length genome sequence of the third generation of Limonium bicolor. Meanwhile, bioinformatics analysis is carried out by using various bioinformatics software, the protein sequence, the secondary structure, the hydrophile-hydrophobicity, the transmembrane domain, the conserved region, the phosphorylation site and the like of the bioinformatics software are predicted, the promoter is analyzed, and the charged amino acid condition of the transmembrane structure is analyzed according to the prediction result.
1 test materials and reagents
1.1 plant Material
Bicolor hematinic seeds are collected in saline-alkali soil of yellow river delta in Dongying City of Shandong province, dried and stored in a germplasm resource library of Shandong university at 4 ℃.
1.2 main chemical reagents and instruments: 1) Culture medium: LB medium, YEB medium, MS medium (Murashige et al) 1962). 2) Antibiotics: ampicillin Ampicillin, kanamycin Kanamycin (60615, sigma, USA), rifampicin Rifampin (R350, sigma, USA). 3) The kit comprises: fastPure Gel DNA Extraction Mini Kit (DC 301, nanking Vazyme), fastPure Plasmid Mini Kit (Nanking Vazyme, china),Plant Total RNA Isolation Kit(Nanjing Vazyme,China)。4)Max Super-Fidelity DNA Polymerase(Nanjing Vazyme)。5)Sal I(P213-AA,Nanjing Vazyme)。6)II One Step Cloning Kit (C112, nanjing Vazyme). 7) SYBR Green real-time fluorescent quantitation PCR premix (Gene Star, china). 8) Competence: DH 5. Alpha. (Nanking Vazyme), GV3101 (Nanking Vazyme). 9) Carrier: pMD18-T Vector, pCAMBIA1300-35S-sGFP (TaKaRa). Other reagents, e.g. agarose, sodium hypochlorite, ethanol, AS (acetosyringone), ddH 2 O is obtained from iso-market
Reagents required for in situ hybridization: DEPC (Amresco), 4% paraformaldehyde DEPC water (Servicebio), paraffin (Sakura), xylene (national chemical group chemical agents limited). PBS buffer (DEPC) 20 XSSC eluate, BSA, proteinase K, DAPI, anti-fluorescence quenching blocking tablet hybridization buffer, anti-DIG-488 (Sericebio).
2 method of experiment
2.1 two-color Limonium bicolor material acquisition in A and B stages: (1) And (4) selecting bicolor hematinic seeds with full seeds and uniform sizes. The bicolor hematinic seeds are firstly placed in 70% ethanol for surface disinfection and fully shaken for 5min. (2) Shaking with 6% sodium hypochlorite (prepared in situ) in shaking bed for 15-20min is used as the index. (3) ddH after autoclaving 2 Washing the Limonium bicolor seeds for 5-6 times by O, and then standing the seeds in water for 30min. (4) After 2-3 times of washing the seeds with sterile water, uniformly sowing the seeds in an MS culture medium, and completely absorbing water. (5) Laying at 26/22 deg.C (day/night), light cycle of 16/8 hr (day/night), and light intensity of 600 μmol/m 2 And/s culture in a tissue culture room. (6) during the culture for 4-5 days, taking the leaves at the stage A; and when the number of days is 6-7d, the true leaves in the period B can be taken. Taking the first true leaf under a dissecting mirror by using a pointed forceps, and quickly freezing and enriching in liquid nitrogen. (7) Storing the plant material in a refrigerator at-80 deg.C, and extracting plant RNA when the material is sufficiently enriched.
2.2 extraction and reverse transcription of total plant RNA: and (3) taking the frozen leaves of the Limonium bicolor at different periods to extract total RNA, wherein the experimental steps are carried out according to the instruction of the Novozapine RNA extraction kit, and the extracted RNA can be directly subjected to reverse transcription to synthesize cDNA.
2.3 Full-length cloning of LbRSG gene: primers were designed according to the information of the full length of the LbRSG gene in the third generation sequencing and Primer premier 5 software, the sequences of the primers are shown in Table 1, and the full length sequence of the gene was cloned using the above cDNA as a template.
TABLE 1 LbRSG Gene amplification primers
And (3) PCR system: primer mix 12.5. Mu.l, lbRSG-S0.2. Mu.M, lbRSG-A0.2. Mu.M, 300ng cDNA, ddH 2 The volume of O is filled to 25 μ l. PCR reaction procedure: 3min at 95 ℃;95 ℃ 15sec,51 ℃ to 55 ℃ 20sec,72 ℃ to 3min,34 cycles; 10min at 72 ℃; storing at 4 deg.C. 10 μ l of PCR product was subjected to 1% agarose gel electrophoresis, and gel recovery was carried out if a band of interest was detected.
2.4 ligation of the recovered fragment to the pMD18-T vector
The linking system is as follows: 1. Mu.l of pMD18-T vector, 1. Mu.l of the DNA fragment of interest, ddH 2 O3. Mu.l, solutioni 5. Mu.l. After brief centrifugation of the above system, the mixture was incubated for 16h at 16 ℃.
2.5 transformation
(1) The DH 5. Alpha. Competent cells were removed from the freezer at-80 ℃ and thawed in ice bath (20 min);
(2) Mixing the ligation product with competent cells according to the volume ratio of 1;
(3) Adjusting the temperature of the water bath to 42 ℃ in advance, standing on ice for 30min, thermally shocking the water bath for 45s, immediately placing the water bath on ice for 2-3min, immediately standing in ice bath for 2min;
(4) Adding 900 mul of LB liquid culture medium without antibiotic into a clean bench, and performing shake culture at 37 ℃ and 200rpm for 1h;
(5) Centrifuging at 8000rpm for 2min at normal temperature. Removing the supernatant, keeping a small amount of supernatant, suspending on a super clean bench, taking 20 mu l of supernatant, coating on an LB solid culture medium containing Amp antibiotics, inversely placing in an incubator at 37 ℃, and culturing overnight;
(6) Streaking, colony PCR, and selecting the correct colony with band for sequencing.
Colony PCR system: primer mix 12.5. Mu.l, lbRSG-S0.2. Mu.M, lbRSG-A0.2. Mu.M, DNA template (single colony), ddH 2 The volume of O was adjusted to 25. Mu.l.
PCR reaction procedure: 3min at 95 ℃;95 ℃ 15sec,51 ℃ to 55 ℃ 20sec,72 ℃ to 3min,34 cycles; 10min at 72 ℃; storing at 4 ℃.
(7) And (4) selecting a bacterial colony with a correct sequence according to a sequencing result, and shaking the bacterial colony in an LB (lysogeny broth) culture medium. Plasmid extraction was performed on the correctly sequenced cell suspension according to the instructions of the FastPreplasmid Mini Kit from Vazyme.
2.6 bioinformatics analysis
Bioinformatics analysis the base sequence and amino acid sequence of a target gene are calculated and searched using biotechnology software, and biological information of the gene is analyzed. In order to better understand the characteristics of genes and encoded proteins, various bioinformatics means are used to analyze gene-encoded proteins in various ways.
After determining the nucleotide sequence encoding the gene of interest, the gene is subjected to bioinformatic analysis: (ii) a gene encoding an amino acid sequence by a Translate Tool (https:// web. Expask. Org/Translate /); protParam (https:// web. Expasy. Org/protpara) primary structure analysis; the secondary structure of the target gene is analyzed by prabi (https:// NPSA-prabi. Ibcp.fr/cgi-bin/NPSA _ Automat.plpage =/NPSA/NPSA _ sopma. Html); carrying out tertiary structure prediction on a target gene by robeta (http:// new. Robeta. Org/results. Phpid =43056# pdb \) and carrying out tertiary structure prediction on the target gene; hydrophilicity prediction of ProtScale (https:// swissminor. Expay. Org) encoded protein; TMHMM (http:// www.cbs.dtu.dk/services/TMHMM /) encodes a transmembrane domain prediction of the protein; prediction of conserved domain of SMART (http:// SMART. Embl-heideLberg. De) encoded protein; server (http:// www.cbs.dtu.dk/services/SignalP /) predicts whether the encoded protein contains a signal peptide; prediction of phosphorylation sites of the protein encoded by NetPhos2.0Server (http:// www.cbs.dtu.dk/cgi-bin/webface 2.); homology analysis of BLAST (https:// blast.ncbi.nlm.nih.gov/blast.cgi) encoded protein; the evolutionary tree was constructed using MEGA-X software.
3 results and analysis of the experiments
3.1 Obtaining of full Length of LbRSG Gene
The result of the full-length amplification of LbRSG gene is shown in FIG. 1.
And comparing the full-length gene clone sequencing result with the full-length sequence of the third generation transcriptome LbRSG by using DNAMAN software.
3.2 Analysis of primary structure and physicochemical properties of LbRSG sequence
The 669bp open reading frame is cloned according to the PCR technology of the leaf development transcriptome data of Limonium bicolor, and 222 amino acids are coded (figure 2). According to ExPASY analysis, the LbRSG gene encodes a protein with the relative molecular mass of 55341.84Da and the isoelectric point (pl) of 5.15, and the molecular formula of the encoded protein is C 2026 H 3388 N 666 O 851 S 145 The total number of atoms is 7076. The coding amino acid sequence has 22 negatively charged amino acids (Asp + Glu) and 27 positively charged amino acids (Arg + Lys).
3.3 Lbrsg secondary structure prediction
It was predicted for secondary structure using prabi. As shown in the figure, the protein contains alpha helix, random coil and extension chain. The proportion of each element of the secondary structure in the secondary structure is 31.98 percent of alpha helix, 50.90 percent of random coil and 17.12 percent of extended chain.
3.4 Prediction of LbRSG protein tertiary structure
The 3D structure of LbRSG protein was predicted de novo using ESyPred 3D Web Server tool. From this prediction, the protein contains an alpha helix, random coil and extended chain.
3.5 Lbrsg amino acid sequence hydrophilicity and hydrophobicity analysis
The gene is known to code 666bp nucleotide sequence and 222 amino acids, and the Prot-Scala tool in ExPASy software is used for analyzing the hydrophilicity and hydrophobicity of the amino acid sequence, wherein the lower the value of the amino acid is, the stronger the hydrophilicity is. The results show that the hydrophilic regions are larger than the hydrophobic regions, and the negative distribution is in the majority, so that the whole polypeptide chain appears hydrophilic and is a hydrophilic protein.
3.6 LbRSG transmembrane structure prediction analysis
TMHMM software was used to predict the transmembrane structure of the gene protein, with 1-12 membrane proteins, 13-35 transmembrane domains, 36-176 membrane proteins, 177-199 transmembrane domains, and 200-222 membrane proteins (FIG. 3).
3.7 Analysis of conserved domain of Lbrsg gene encoding protein
SMART software was used to predict the conserved domains of LbRSG, with transmembrane domains present at 13-35 and 177-199.
3.8 Lbrsg signal peptide analysis
The singal4.1 software is used for detecting a signal peptide, and the protein is analyzed and found to have the signal peptide, and the signal peptide is supposed to be possibly related to the membrane location for inducing the protein.
3.9 Lbrsg phosphorylation site analysis
Phosphorylation and dephosphorylation are important modes of intracellular signaling, and phosphorylation site analysis was performed using the netphos2.0Server (http:// www.cbs.dtu.dk/cgi-bin/webface 2.) program on the CBS Server of danish university of technology (DTU). The NetPhos2.0Server program is based on a neural network algorithm and used for predicting phosphorylation sites which can be formed by three amino acid residues including Ser, thr and Tys in a protein sequence. The predicted results are shown in FIG. 4, from which we can see that there are 21 sites at which the protein is likely to be phosphorylated.
3.10 LbRSG transmembrane protein schematic diagram
Analysis of the charge of the amino acids on the outside of the membrane for analysis, the amino acids on the outside of the membrane with negative charge, namely aspartic acid and glutamic acid (Asp (D) + Glu (E)), total 21 amino acids with negative charge; the extra-membrane positively charged amino acids, arginine and lysine (Arg (R) + Lys (K)) total 18 negatively charged amino acids; at this point, there are net 3 negative charges outside the membrane.
3.11 Relative expression of LbRSG in different periods
A high-sensitivity fluorescent quantitative PCR method is adopted to detect the relative expression quantity of unknown LbRSG genes in 11 different development stages (stage A-E, mature stage) of Limonium bicolor leaves, different tissues (roots and stems) and different treatments (NaCl, GA and ABA) (figure 5). The Real-time PCR results showed that LbRSG was highly expressed during early leaf development stage A, stage B, and stage C and salt treatment.
Since no saline gland structure is reported in any of the currently sequenced species, and no homologous gene is aligned in the Nr database, we determined that it is probably a new unknown functional gene specific to limonium bicolor and speculated that it is highly likely to participate in the saline gland development of limonium bicolor.
According to a second generation transcriptome database, lbRSG genes highly expressed in early salt gland development stage are screened, and after the full-length sequences of the LbRSG genes are cloned, the amino acid sequences coded by the genes are subjected to bioinformatics analysis. The protein is a transmembrane protein, and a peptide chain at the outer side of a membrane accounts for a large part, and analysis shows that the net 3 negative charges of amino acid outside the membrane are presumed to have a certain relation with the combination of certain positive salt ions, so that the protein has certain salt resistance. The C-segment has phosphorylation sites of serine and threonine, and may be involved in intracellular reactions caused by cascade amplification signals.
According to the judgment of the relative expression quantity of the LbRSG gene in different periods, parts and treatments of Limonium bicolor leaves, the expression quantity is obviously increased after NaCl treatment, GA treatment is not obviously changed after ABA treatment, and the expression quantity in roots is the least. The expression level was high in the B and C periods, and it was assumed that the protein may be involved in the development of salt gland. The in situ hybridization verifies that the gene is expressed in the saline gland and the stomata, and particularly the expression level of the gene is higher in the saline gland part. Constructing a pCAMBIA 1300-35S-sGFP-LbRSG gene expression vector for subcellular localization, selecting pCAMBIA1300-35S-sGFP no-load as a control, and combining marker gene localization of cell nucleus and plasma membrane to show that the gene is expressed on cell membrane. The experimental process has great relation with the freshness of the onion, the concentration of the bacterial liquid and the culture time, and the light emitting conditions of GFP, DAPI and FM4-64 are observed by using a two-photon confocal microscope after the surface bacterial liquid needs to be cleaned when the temporary film is loaded.
The embodiment defines the basic structure of the LbRSG and performs the credit generation analysis, and lays a foundation for the subsequent deep development of the functional research of the LbRSG. On one hand, it is clear that LbRSG is a basic transmembrane protein, but unlike most transmembrane proteins, lbRSG has a very large extracellular loop, and may be involved in ionic response and signal transmission, and in addition, the continuous negative charge region of the extracellular loop suggests whether LbRSG can be involved in cation (such as Na) + 、Ca 2+ ) The intracellular signal cascade amplification is caused by the phosphorylation of the C terminal, the LbRSG is used for explaining the characteristic that the LbRSG participates in plant salt resistance, and a foundation is laid for the research of LbRSG participating in the salt gland development.
Example 2 LbRSG promoter cloning and functional analysis
This example clones the promoter of a gene by chromosome walking and analyzes the elements of the promoter. Constructing an expression vector containing a gene specific promoter, transforming arabidopsis thaliana, screening homozygote, and then positioning the expression position of the gene through GUS staining for explaining the possible salt resistance function of LbRSG.
1 test materials and reagents
1.1 plant Material
Plant material: columbia ecotype (Col-0) Arabidopsis plants.
The culture method comprises the following steps:
(1) Seed disinfection: sterilizing with 75% ethanol under shaking for 3 times (4 min for each time), sterilizing with 95% ethanol under shaking for 3 times (1 min for each time), and washing with sterile water for 3 times;
(2) Vernalizing Arabidopsis seeds on a 1/2MS culture medium in a refrigerator at 4 ℃ for 2d;
(3) Transferring to an arabidopsis culture box, and culturing for about 7 d;
(4) Transplanting the seedlings into a 10cm small flowerpot (nutrient soil is used as a culture medium) for continuous culture.
1.2 Main chemical reagents and instruments
TaKaRa Tks Gflex DNA Polymerase (Code No. R060A); taKaRa Genome Walking Kit (Code No. 6108); DNA Ligation Kit (Code No. 6022); takara MiniBEST Agarose Gel DNA Extraction Kit Ver.3.0 (TaKaRa Code No. 9762); in-Fusion HD Cloning Kit (Clontech Code No. 639648); coli component Cell JM109 (TaKaRa Code No. 9052); hind III (TaKaRa Code No. 1060A); nco I (TaKaRa Code No. 1160A); DL15000DNA Marker (TaKaRa Code No. 3582A); GL DNA Marker 5000 (Code No. AG11906, ascorgi bioengineering, inc., hunan).
2 Experimental methods
2.1 acquisition of Limonium bicolor LbRSG Gene DNA flanking sequence
Primers for cloning the sequences flanking the DNA at the 5' end of the gene were designed based on the DNA sequence of the LbRSG gene (Table 2).
TABLE 2 primers for cloning of 5' end DNA flanking sequence of LbRSG gene
The primers used for colony PCR verification of LbRSG gene are shown in Table 3.
TABLE 3 primers used for PCR verification of LbRSG Gene colonies
The leaf Genome DNA is taken as a template, taKaRa Genome Walking Kit (Code No. 6108) is used for reaction, and the reaction steps are as follows:
(1) 1st PCR reaction:
a first PCR reaction was carried out using P1 (AP 2, AP3, and AP4 performed simultaneously) as the upstream primer and 5SP1 as the downstream primer.
(1) A1 st PCR reaction solution was prepared from the following components:
(2) the 1st PCR reaction conditions were as follows:
(2) 2nd PCR reaction:
taking 1. Mu.l of diluted 1st PCR reaction solution as a template of 2nd PCR reaction, and using an upstream primer P1; the downstream primer 5SP2.
(1) The 2nd PCR reaction system is as follows:
(2) the 2nd PCR reaction conditions were as follows:
(3) 3rd PCR reaction:
taking 1 mu l of diluted 1st PCR reaction solution as a template of 3rd PCR reaction, and using an upstream primer P1; the downstream primer 5SP3.
(1) Preparing 3rd PCR reaction solution according to the following components:
(2) the 3rd PCR reaction conditions were as follows:
(4) Taking 5 mul of each PCR reaction solution, and carrying out electrophoresis by using 1% agarose gel;
(5) After gel cutting and recovery, sequencing a PCR product by taking a 5SP3 Primer as a Primer;
(6) Taking 5 mu l of each PCR reaction solution, and carrying out electrophoresis by using 1% agarose gel;
(7) And cutting and recovering the gel, converting the recovered product into a pMD19T cloning vector, converting escherichia coli Trans-T1 competence, selecting a bacterial colony with a correct band after the bacterial colony is subjected to PCR, extracting a plasmid for sequencing, and performing DNA sequencing on a PCR product by taking pMD 18F, P1, pMD 18R and 5SP3 Primer as primers.
The batch identification system is as follows:
the reaction conditions were as follows: 1min at 94 ℃;98 ℃ 10sec,50 ℃ 15sec,68 ℃ 1min,34 cycles.
2.2 LbrSG promoter element analysis
The promoter sequence cis-acting elements of the LbRSG gene were analyzed using the on-line tool on the plantaCARE (Lescot et al 2002) and GSDS2.0 (Hu et al 2015).
2.3 replacement of the pCAMBIA 3301S promoter with the LbRSG promoter
In order to clarify the expression site of LbRSG, the 35S promoter of the pCAMBIA3301 vector is replaced by the LbRSG promoter, and the GUS gene expression position is determined after the Arabidopsis is infected.
2.3.1 pCAMBIA3301 Linear vector production
Plasmid pCAMBIA3301-35S-GUS was digested with HindIII/NCoI.
The enzyme digestion reaction system is as follows:
the reaction conditions are as follows: 2h at 37 ℃.
2.3.2 cloning of promoter fragments
2.3.2.1 extraction of Limonium bicolor DNA
Extracting the bicolor limonium DNA by a CTAB method: (1) Taking a small amount of Limonium bicolor leaves, grinding by liquid nitrogen, and adding into a centrifuge tube; (2) Adding 800 μ l CTAB, water-bathing at 65 deg.C for 30min, continuously reversing and mixing, centrifuging at 13000rpm for 5min at normal temperature by centrifuge; (3) Transferring the supernatant to a new centrifuge tube, adding 500 μ l chloroform, mixing, and standing for 5min; centrifuging at 13000rpm for 5min; (4) Transferring the supernatant to a new centrifuge tube, adding isopropanol with the same volume, mixing uniformly, standing at-20 ℃ for 2h, and then centrifuging at 13000rpm at 4 ℃ for 10min; (5) Removing supernatant, adding 700 μ l of 75% ethanol, washing, and repeating once; (6) Add 50. Mu.l of RNase-containing ddH 2 O, DNA is dissolved.
2.3.2.2 primers for LbRSG gene promoter cloning were designed (Table 4).
TABLE 4 primers for LbRSG Gene promoter cloning
2.3.2.3 amplification of the product of interest
The reaction system is as follows:
the reaction conditions were as follows: 1min at 94 ℃;98 ℃ 10sec,55 ℃ 15sec,68 ℃ 2min,40 cycles.
2.3.3 ligation of Linear vector and PCR product into recombinant plasmid
The linking system is as follows:
reaction conditions are as follows: 15min at 50 ℃.
2.4 infection with wild type Arabidopsis thaliana
2.4.1 cultivation and treatment of Arabidopsis thaliana: and (3) cutting off fruit pods and flowers which are already opened when the arabidopsis thaliana in the incubator grows to about 10cm, and fully watering for later use. The condition of the incubator is that the illumination intensity is 120-150 mu mol/m 2 The photoperiod was 16/8h (day/night), the culture temperature was 22 ℃/18 ℃ (day/night) and the relative humidity was 75%.
2.4.2 preparing bacterial liquid: (1) Thawing agrobacterium containing target genes in an ice bath, transferring the agrobacterium to YEB liquid culture medium, simultaneously adding Kan and Rif (the final solubility is 50 mu g/ml), and culturing in an incubator at 28 ℃ at 180rpm overnight; (2) Taking 1-2ml of activated bacterium liquid, carrying out secondary bacterium shaking in YEB culture medium containing Kan, rif and AS (final solubility is 10 mu g/ml), and culturing for 6-8h; (3) Transferring the activated bacterial liquid into a 50ml large centrifuge tube, centrifuging at 4 ℃ and 6000rpm for 5min, and removing the supernatant; (4) Resuspending the bacterial pellet with 5% sucrose solution, measuring the absorbance with UV spectrophotometer, and adjusting OD 600 The value is in the range of 0.8-1.0; (5) And subpackaging the suspended bacterium liquid in 1.5mL Ep tubes, adding 0.1% of surfactant Silwet L-77 into each tube, and fully and uniformly mixing.
2.4.3 infection of Arabidopsis inflorescences: sucking prepared bacterium liquid, dip-dyeing the arabidopsis inflorescences until each flower is fully dip-dyed by the bacterium liquid, placing the arabidopsis inflorescences in an incubator for dark culture for 24 hours, then normally culturing, infecting the arabidopsis inflorescences once every 7 days until no new inflorescences grow out, and infecting the inflorescences for three times.
2.5 screening and identification of Arabidopsis Positive lines: 2.5.1 screening of the positive lines was carried out using the herbicide BASTA (from Coolaber, based on glufosinate-ammonium) according to the resistance of the pCAMBIA3301-35S-sGUS vector, as follows: (1) Drying the harvested seeds after inflorescence infection, removing impurities, then placing the seeds in a 5mL centrifuge tube, adding a proper amount of sterile water, vernalizing the seeds in a refrigerator at 4 ℃ for 2 days, then planting the seeds in a big white basin filled with nutrient soil, covering a layer of preservative film on the basin, and placing the basin in an incubator for culture; (2) When the arabidopsis grows to the six-leaf stage, 0.1 percent herbicide BASTA is sprayed, and the spraying is carried out for 2 to 3 times in a week; and (3) transferring the surviving plants to a new flowerpot for culture.
2.5.2 CTAB method for quickly extracting arabidopsis genome DNA
(1) Shear 2mm 2 Positive seedling leaves are placed in a small Ep tube; (2) adding 20. Mu.l of TPS buffer; (3) fully mashing the leaves with toothpicks; (4) after reacting for 15min at 95 ℃, immediately placing on ice for 3-5min;
(5) Add 50. Mu.l ddH 2 And O, mixing uniformly to be used as a template for PCR reaction.
Ext> 2.5.3ext> identificationext> ofext> theext> positiveext> linesext> usingext> pCAMBIAext> 3301ext> -ext> Sext> andext> LbRSGext> -ext> Aext> asext> primersext>.ext>
TABLE 5 primers used for screening of heterologously expressed plants
After positive strains are verified by DNA level, positive seedlings are selected and cultured to T3 generation.
2.6 GUS staining observation of the gene tissue location
GUS staining analysis was performed according to previously reported methods (Troll et al,1955 Lin et al, 2015).
The specific method comprises the following steps: (1) pretreatment: the screened homozygous arabidopsis seeds are planted in a culture medium, and after the seeds grow for 5 days, the whole arabidopsis seedling is taken and the culture medium is washed by distilled water; (2) dyeing: putting a proper amount of prepared GUS staining working solution into a 1.5mL Ep tube to completely immerse plant materials, wrapping 28 ℃ with tin foil paper, and standing overnight; (3) elution: eluting with 70% ethanol for 1 hr each time until the leaves become white by visual observation, and eluting for 3 times; (4) Observation: and (4) dropwise adding a transparent liquid to prepare a temporary mounting piece, and observing a blue GUS expression site under a microscope.
3 results and analysis of the experiments
3.1 acquisition of the DNA flanking sequences of Limonium bicolor LbRSG Gene
PCR was carried out using the Limonium bicolor leaf Genome DNA as a template and the nested primers LbrSG 5SP1, lbrSG 5SP2, lbrSG 5SP3 and the degenerate primers AP1, AP2, AP3, AP4 as primers by the chromosome Walking method using the TaKaRa Genome Walking Kit, and 5. Mu.l of each of the first, second and third PCR products was subjected to 1% agarose gel electrophoresis, and the bands obtained in the three times are shown in FIG. 6. Using Takara MiniBEST Agarose Gel DNA Extraction Kit Ver.4.0 (Code No. 9762) to cut Gel and recover amplification product band with size of about 0.8kbp of 3rd AP4, connecting the recovery product of the target band to PMD19T cloning vector, using LbRSG YF1 and LbRSG YR1 as primer gene colony PCR identification after transforming Escherichia coli, selecting identified strain and placing in liquid LB culture medium, adding Amp to shake bacteria, using universal primers pMD 18F and pMD 18R to perform sequence determination after extracting plasmid, the sequencing result shows that the obtained DNA fragment corresponds to LbRSG gene, and the gene sequence part can be found in the sequencing result. Finally, the sequence 3030bp of the 5' end of the LbRSG gene is obtained (figure 7).
3.2 promoter element analysis: predicted from LbRSG gene promoter, it was found to have necessary promoter elements, and some elements (ABRE, GARE-motif, AAAC-motif) responding to abscisic acid, gibberellin, auxin, and in addition some action elements (LTR, MBS, G-Box) responding to low temperature, drought, and light response, and the specific elements and positions are shown in FIG. 8.
3.3 Construction of pCAMBIA3301-LbRSG Promoter-sGUS vector: the products obtained by digestion were subjected to 1% agarose gel electrophoresis using appropriate amounts of the gel, and the results are shown in FIG. 9A: and cutting and recycling the rubber. And (3) performing gel recovery on target gene PCR (shown in figure 9B) by electrophoresis, connecting with a linearized expression vector, transforming into escherichia coli (shown in figure 9C), transforming agrobacterium after correct sequencing, and selecting strain No. 2 for storage, wherein the result is shown in figure 9D.
3.4 screening and identification of Arabidopsis heterologous expression positive strains: after regular spraying of the herbicide BASTA (purchased from Coolaber, the main ingredient being glufosinate), it was found that most arabidopsis thaliana were screened lethal in the first screening generation (fig. 10). DNA of each surface strain of Arabidopsis thaliana after herbicide screening is extracted, primers are designed for PCR amplification, and the electrophoresis detection result of the PCR product is shown in FIG. 11.
3.5 And (4) observing a GUS staining result: in order to understand the tissue location of the LbRSG gene in Arabidopsis, an expression vector is constructed by using a gene-specific promoter, and GUS staining is used for observing the expression of the gene in different tissues.
In order to more intuitively display the expression pattern of LbRSG in different tissues of Arabidopsis, the expression distribution in LbRSG plant cells was examined by staining the LbRSG promoter-GUS transgenic line. GUS coloration indicates that LbRSG is significantly expressed in Arabidopsis young leaves, floral organs, roots and pods, while it is rarely expressed in cotyledons. GUS visualization also showed that LbRSG was significantly expressed in epidermal hair, root hair and veins of mature leaves (fig. 12).
In order to investigate the tissue localization of the LbRSG gene, this example obtained 3030bp of promoter sequence before the coding region of the gene by means of chromosome walking. Three homodromous and high-specificity specific primers (SP primers) are respectively designed according to CDS sequences of genes, and are subjected to thermal asymmetric PCR reaction with four uniquely designed degenerate primers with lower annealing temperatures, namely AP1, AP2, AP3 and AP 4.
By analyzing the promoter sequence, it is found that the promoter of the gene has some elements (ABRE, GARE-motif and AAAC-motif) responding to abscisic acid, gibberellin and auxin and some elements (LTR, MBS and G-Box) responding to low temperature, drought and light response besides some necessary cis-acting elements (TATA-Box and CAAT-Box) (Twyman, 2003), which may have a certain relation with the function of the gene. Provides important information for the subsequent research on gene functions.
The pCAMBIA3301-35S-GUS is used for constructing a gene specific promoter expression vector, a promoter of a gene per se is required to replace a 35S strong promoter of an original vector, the vector contains a GUS reporter gene, the constructed expression vector can be used for infecting arabidopsis thaliana, screening T3 generation homozygous transgenic arabidopsis thaliana, and observing the expression of the gene on different tissues by staining, so that the gene is mainly expressed at a vein, a root and rhizome combination part, a root and root hair part of the arabidopsis thaliana, particularly the staining at the root and rhizome combination part is deeper, and a certain relation possibly exists between the formation of the root and the generation of the root hair. Secondly, expression was found to be more pronounced in the mature region of the primary root, but less or even not at the root tip, especially in the meristematic region of the root tip.
Through promoter cloning, 35S promoter replacement, construction of gene specific promoter and transformation of Arabidopsis thaliana after connection of GUS vector, the LbRSG1 is mainly located in a conduction tissue, such as vein, rhizome junction and root hair, and the association of the gene with ion absorption and response can be suggested.
Example 3 phenotypic analysis of Limonium bicolor Gene LbRSG silencing lines, overexpressing transgenic plants
1. Construction of Limonium bicolor gene LbRSG silent line
1 main chemical reagents and instruments
1) Culture medium: LB medium, YEB medium, MS medium. 2) Antibiotics: ampicillin Ampicillin, kanamycin Kanamycin (60615, sigma, USA), rifampicin Rifampin (R350, sigma, USA). 3) The kit comprises: fastPure Gel DNA Extraction Mini Kit (DC 301, nanjing Vazyme), fastPusmid Mini Kit (DC 201, nanjing Vazyme Biotech, china),plant Total RNA Isolation Kit (Vazyme, nanjing, china). 4) Enzyme: nco I (NEB), bsaI (NEB), T4 Ligase (NEB), 2XTaq Plus Master Mix II (P213-AA, nanjing Vazyme),Max Super-Fidelity DNAPolymerase(P505-d1/d2/d3,Nanjing Vazyme),II One Step Cloning Kit (C112, nanjing Vazyme). 5) SYBR Green real-time fluorescent quantitative PCR premix (Gene Star, china). 6) Competence: DH 5. Alpha. (Nanking Vazyme), GV3101 (Nanking Vazyme). 7) Carrier: pCAMBIA3301-35S-sGUS (TaKaRa), pHEC401-CRISPR/Cas9 (TaKaRa), pCBC-DT1T2 (TaKaRa). Other reagents, e.g. agarose, glycerol, AS (acetosyringone), ddH 2 O and the like are all commercially available.
2 Experimental methods
2.1 Construction of LbRSG knockout vector
Gene knockout primers were designed using CRISPR/Cas9 gene knockout technology (Ma Y, z.l., huang x.2014 Dec5186-93 (2018) Genome modification by CRISPR/case 9.Febs j.bmc Plant Biol,281 (23), 86-93).
By using CRISPR/Cas9 gene knockout technology, introns need to be avoided when primers are designed, limonium bicolor genome DNA is used as a template, 2DT1-BsF, 2DT1-F0, 2DT2-R0 and 2DT2-BsR are used as primers, and PCR amplification is carried out by using a four-primer method to obtain a corresponding DNA sequence. Cas9 can target a specific gene sequence through a 20bp guide sequence on the sgRNA, the only requirement for selection of the Cas9 target site is the presence of a PAM sequence at the 3' end of the 20bp target sequence. Therefore, based on the obtained gene DNA sequence, knockout primers were designed in the exon region, the length of the primers was around 20bp, and the primers were searched 20bp before the PAM sequence, and the method was referred to (Cong L, R.F.A., cox D, et al, (2013) Multiplex genome engineering using crisopr/cas systems, science,339 (6121)). The information of the primers used to construct the CRISPR-Cas9 vector is shown in table 6.
TABLE 6 primers for construction of CRISPR-Cas9 vectors
The nucleotide sequence of the sgRNA action site is 5.
2.1.1 PCR amplification
Firstly, carrying out four-primer PCR amplification by taking a pCBC-DT1T2 intermediate vector as a template to obtain an intermediate vector pCBC-DT1T2 containing two target site sequences, wherein the length of the fragment is 626bp, and thus a CRISPR-Cas9 expression vector fragment is obtained. The following components were added to a microcentrifuge tube to form a 50. Mu.l system:
the reaction conditions were as follows: 3min at 94 ℃; 30sec at 94 ℃, 30sec at 56 ℃, 1min at 72 ℃ and 34 cycles; storing at 4 deg.C.
2.1.2 purification and recovery of PCR products, the procedure is as in example 2.
2.1.3 the following enzyme digestion-ligation system was established: the intermediate vector pCBC-DT1T2 containing the two target site sequences was ligated to the vector pHEC401 (the vector pHEC401 was awarded by the Liu flare light professor of southern China university) using T4 Ligase (NEB) using BsaI (NEB) for enzymatic cleavage, to construct the pHEC401-2gR-LbRSG expression vector, in the following system:
the reaction system is as follows:
the reaction conditions were as follows: 5h at 37 ℃; 5min at 50 ℃;10 min at 80 ℃.
2. Construction of transgenic lines overexpressing LbRSG
Construction of 1pCAMBIA1300-LbRSG vector
1.1 Cloning of the LbRSG target fragment: by utilizing a seamless cloning technology, salI restriction enzyme cutting sites are selected, and homologous recombination primers for amplifying target genes are designed through CE Design V1.04 software, wherein the primers are shown in a table 7:
TABLE 7 pCAMBIA1300-35S-sGFP homologous recombination primers
PCR amplification reaction System:
reaction conditions are as follows: 3min at 95 ℃;95 ℃ 15sec,68 ℃ 15sec,72 ℃ 90sec,34 cycles; 5min at 72 ℃; storing at 4 ℃.
1.2 recovery of fragments of interest
1.3 preparation of pCAMBIA1300 vector DNA: the pCAMBIA1300-35S-sGFP expression vector containing hygromycin resistance gene and GFP reporter gene is used for subcellular localization of the gene.
1) Enzyme digestion reaction
Reaction system:
the reaction conditions are as follows: 30min at 37 ℃.
2) And (5) recovering the carrier.
1.4 ligation of the gene of interest to pCAMBIA1300-35S-sGFP vector DNA: using the seamless cloning techniqueII One Step Cloning Kit, (C112), the recovered product of the gel was ligated with the linearized pCAMBIA1300-35S-sGFP expression vector, and the ligated product was named pCAMBIA1300-LbRSG.
A connection system:
connection conditions are as follows: 30min at 37 ℃.
2 plasmid transformation of Escherichia coli
1) Taking out the competent cell DH5 alpha from a-80 refrigerator, and unfreezing the competent cell DH5 alpha on ice for 20min; 2) Pipetting 5-10 μ l of the ligation product with a pipette, adding into 30-50 μ l of competent cells, blowing, mixing, and standing on ice for 30min; 3) Heating in water bath at 42 deg.C for 45s, immediately placing on ice for 2min; 4) The pipette is used to suck 900 mul LB liquid medium (without antibiotics) into the mixture and shake the mixture at 37 ℃ for 1h (rotation speed 200-250 rpm); 5) Pouring the plate in 1h of shaking the bacteria, heating and melting LB solid culture medium in a microwave oven, cooling to about 60 ℃, adding corresponding antibiotic (Kana or Amp with the final concentration of 50 mug/mL), uniformly mixing and pouring into a plate; 6) Shaking the bacteria for 1h, centrifuging at 5000rpm in a centrifuge for 5min, discarding the supernatant, lightly blowing the residual liquid culture medium with a pipette to resuspend the bacteria, sucking 20 μ l of the resuspended bacteria into a solid culture medium (the residual bacteria can be temporarily stored in a refrigerator at 4 ℃), and lightly coating the bacteria on a flat plate with a sterile coating rod (the coating rod rotates in one direction in the coating process); 7) After the bacterial liquid is evenly coated, sealing a dish by using a sealing film, putting the dish into an incubator at 37 ℃ for inverted culture for 12-16h, and screening positive clones; 8) After culturing, a monoclonal product can grow on the transformed plate (at this time, if a sterile colony grows out, the residual bacterial liquid can be used for secondary coating), and a single colony is picked for streaking and propagation; 9) Colony PCR is carried out by using the primers on the carrier, and the colony with the correct band is selected for sequencing.
3 transformation of Agrobacterium with vector
1) After sequencing, comparing, selecting corresponding bacterial colony shake bacteria without mismatch, extracting plasmids such as the plasmid in the connection of the target fragment amplified in chapter 2.5 II and the pMD18-T vector; 2) Taking out the agrobacterium-infected state from a-80 refrigerator, and unfreezing the agrobacterium-infected state on ice for 20min until the agrobacterium-infected state is completely melted; 3) Pipetting 5 mul of plasmid with a pipette gun, adding into 30-50 mul of competent cells, gently blowing and mixing with the pipette gun, and standing on ice for 30min; 4) Putting the mixture into liquid nitrogen at medium speed for 5min; 5) Taking out from liquid nitrogen, immediately placing into a 37 deg.C water bath to melt competent cells for 5min;
6) Sucking 900 μ l YEB liquid culture medium with pipette in super clean bench, adding into the mixture, gently blowing, mixing, and placing in 28 deg.C shaking table at 200r/min for 3 hr; 7) Melting the solid YEB culture medium in a microwave oven, cooling to about 60, adding 50 mu g/mL kanamycin (Kana) and rifampicin (Rif), and uniformly mixing and pouring the mixture into a plate; 8) Putting the shaken bacterial liquid into a centrifuge at 5000rpm, centrifuging for 1min, and enriching thalli; 9) Discarding the supernatant, gently blowing and beating the residual liquid culture medium by using a pipette to resuspend the thalli, sucking 20 mu l of the resuspended thalli into a solid culture medium (the residual thalli can be temporarily stored in a refrigerator at 4 ℃), and gently and uniformly coating on a flat plate by using a sterile coating rod (in the coating process, the coating rod rotates towards one direction); 10 Culturing in 28 deg.C incubator, screening positive clone, selecting single clone colony (the residual bacterial liquid can be used for secondary coating if aseptic colony grows out) after about 48 hr, and streaking for propagation; 11 Colony PCR was performed, colonies with bright and correct bands were selected, and the colonies were kept by shaking.
4 preservation of Strain
1) Agrobacterium colonies containing the correct target fragment were picked up using a sterilized pipette tip and placed in 50mL YEB broth, to which Kana 50. Mu.g/mL and Rif 50. Mu.g/mL were added, and the mixture was placed on a shaker at 28 ℃ and cultured overnight at 180 r/min. 2) Preparing glycerol sterilized in an autoclave, sucking 300 mu l of glycerol and 700 mu l of bacterial liquid, adding into a 1.5mL Ep tube, fully shaking and uniformly mixing by using a vortex instrument, and putting into liquid nitrogen for quick freezing for 5min. 3) The Ep tube was clipped out with tweezers and stored in a refrigerator at-80 ℃.
Infection of 5-dichromatic Limonium Gmelinii leaves
5.1 shaking bacteria
(1) Taking out the agrobacterium liquid containing the pHEC401-2gR-LbRSG expression vector and the pCAMBIA1300-LbRSG expression vector in a refrigerator at the temperature of-80 ℃, and melting the agrobacterium liquid in ice bath for 30min. (2) The suspension was transferred to 50mL YEB medium (containing Kan and Rif at a final concentration of 50. Mu.g/mL, 20. Mu.M AS) using a pipette gun and shake-cultured at 28 ℃ and 200rpm for 24 hours. (3) And (4) activating the bacterium solution which is shaken for the first time again to enable the activity of the agrobacterium to reach the highest. The first shaken broth was pipetted into a new 50mL YEB medium (containing Kan and Rif with a final solubility of 50. Mu.g/mL, 0.2. Mu.M AS) and shaken at 200rpm at 28 ℃ for 6h.
5.2 infection
(1) The shaken bacterial solution was poured into a 50ml centrifuge tube and centrifuged at 6000rpm at 4 ℃ for 10min. (2) The supernatant was discarded, suspended in MS liquid, and then transferred to 50ml of liquid medium, to which 0.2. Mu.M of AS was added. The OD value of the bacterial suspension was about 0.7 (λ =600 nm). And (3) culturing the sterile seedlings for 30 days. (4) The culture medium adhering to the lateral roots and the main roots was removed with forceps, and the roots were cut into 1cm long. (5) Placing in prepared bacterial liquid for infection for 17min, continuously shaking during the infection period, and accelerating the infection. (6) The dry bacteria solution is sucked by filter paper, evenly placed on an MS solid culture medium containing glucose and gibberellin, and cultured in dark for 4d. (7) Transferring to MS solid culture medium containing piperate, hygromycin and gibberellin, and culturing under light. (8) After cluster buds grow, the cluster buds are transferred to a rooting culture medium, and meanwhile, leaves are taken to observe the development condition of the saline glands.
3. Subcellular localization
The overexpression vector constructed above is used to transform agrobacterium GV3101, and a method for infecting onion epidermis by agrobacterium is adopted (Sun et al 2007), which comprises the following steps:
1) Taking fresh onion bulb, peeling three to four layers of scales on the outer surface, disinfecting with 75% ethanol for 10min, then washing with deionized water for 3 times, cutting the inner onion skin into the size of 1cm multiplied by 1cm by a blade, tearing off the cut inner skin with a pair of tweezers, washing with sterile water for 3 times, sucking surface water with filter paper, then placing on a 1/2MS culture medium, and carrying out dark culture at 24 ℃ for 24h.
2) The G.sub.V 3101, which carries the pCAMBIA 1300-35S-sGFP-LbRLG expression vector and pCAMBIA1300-35S-sGFP no-load, was removed from a-80 ℃ freezer, thawed in an ice bath, added to YEB medium containing Kan and Rif at 50. Mu.g/mL, shaken at 28 ℃ and 180rpm overnight.
3) Centrifuging the bacterial solution at 4 deg.C and 6,000rpm for 1min, suspending the bacteria with MS liquid culture medium, adding AS (final concentration of 200 μ M), and measuring OD of bacterial solution with ultraviolet spectrophotometer 600 It is preferably about 1.0.
4) Placing the pre-cultured onion epidermal cells in prepared bacterial liquid, fully submerging, infecting for 30min, then taking out the epidermis by using tweezers, sucking dry the surface bacterial liquid by using filter paper, and paving on a 1/2MS culture medium (the final concentration is 20 mu M), and co-culturing for 2d at 24 ℃.
5) The onion skins were removed with forceps and rinsed clean with sterile water and placed directly on a glass slide.
6) DAPI staining: DAPI (4 ', 6-diamidino-2-phenylindole), namely 4',6-diamidino-2-phenylindole, is a fluorescent dye capable of strongly binding to DNA and is commonly used for fluorescent microscope observation. Since DAPI can penetrate intact cell membranes, it can be used to stain both living and fixed cells, here the nucleus. The incident light was 358nm and the emergent light was 461nm, at a concentration of 10. Mu.g/. Mu.l. The dyeing time is 5-10min.
7) FM4-64 staining: FM4-64 is a non-toxic water-soluble substance capable of specifically staining membranes, and is commonly used for staining cell membranes by utilizing the characteristic that the FM4-64 can emit high-intensity fluorescence after being specifically combined with plasma membranes. FM4-64 is dissolved in DMSO, the concentration of mother liquor is 800 μ M, the working concentration is 4 μ M, the incident light of FM4-64 is 559nm, and the emergent light is 648-734nm. The dyeing time is 1-10min.
8) Observed with a confocal laser microscope.
4. Results and analysis of the experiments
Construction of 1CRISPR-Cas9 knockout vector
Since the full-length cloning of genes is performed according to the third generation transcriptome sequencing, but many genes contain introns, before designing gene knockout primers, the genome sequence of the genes needs to be found, and the primers need to be designed according to a continuous exon sequence so as not to knock out the site on the intron. Through DNMAN mapping (FIG. 14), the template (cDNA) sequence in FIG. 13 was finally determined to design knock-out primers. Taking a proper amount of an intermediate vector pCBC-DT1T2 product containing two target site sequences obtained by PCR (polymerase chain reaction) for carrying out 1% agarose gel electrophoresis to obtain a 626bp correct target band; cutting and recovering the gel, connecting a target band to an expression vector pHEC401, converting the constructed pHEC401-2gR-LbRSG expression vector into escherichia coli, performing colony PCR amplification by using a U6-26F forward primer and a U6-29R reverse primer, amplifying a correct target fragment of 726bp, selecting a monoclonal colony with a correct band, sequencing by using 626F and 629F primers, comparing, and then containing an editing sequence to indicate that the vector is successfully constructed, identifying the colony PCR after the agrobacterium is converted into a positive strain, and storing the strain for converting wild-type limonium bicolor.
2 infecting bicolor limonium leaf explant to obtain transgenic regeneration plant
After agrobacterium is transformed by the LbRSG knockout vector, limonium bicolor leaves are infected to obtain callus, and a transgenic regeneration strain is screened on a culture medium by utilizing hygromycin. The main roots are infected at present, and screening is carried out on a hygromycin screening culture medium (figure 15), adventitious buds grow out, and after rooting screening, an LbRSG knockout line 3 strain is obtained (figure 16).
3 Limonium bicolor knockout mutant and salt gland observation of epigenetic line
Wild type Limonium bicolor has blue autofluorescence under 330-380nm ultraviolet excitation light, and four obvious salt gland luminescence points can be seen, which are formed by thickening intercellular stratum corneum. When the Limonium bicolor explants were infected, the uninfected wild Limonium bicolor was used as a control group, and cultured under the same conditions, and then the true leaves redifferentiated from the roots were picked with tweezers, and the saline gland development was observed under DIC and fluorescence microscope (FIG. 17).
Limonium bicolor is infected by agrobacterium containing a gene overexpression vector, and is screened by hygromycin, a cluster bud grows from callus near roots, when the bud grows to the size of a true leaf in the D period and the E period, a part of leaves are taken to respectively manufacture a temporary mounting piece, and the salt gland phenotype of the Lbryonia bicolor LbRSG1 knockout and overexpression strain is observed under a microscope, as shown in figure 18. The wild type has obvious salt gland with 4 luminous points through ultraviolet autofluorescence and GFP observation. The LbRSG knockout mutant has three-luminous-point salt gland, and the number of constitutional cells of the salt gland is obviously reduced; the phenotypic strain shows that the salt gland component cells are obviously increased, and the salt gland phenotype of an eight-luminous point or a nine-luminous point is shown. Indicating that LbRSG is indeed involved in the regulation of the differentiation of saline glands.
4 onion subcellular localization results
The expression of the GFP reporter gene was detected by observation using a two-photon confocal microscope, and it was revealed that the protein encoded by the LbRSG gene was localized to the cell membrane (fig. 19).
To investigate whether the LbRSG gene plays a key role in the development of limonium bicolor salt glands, this example silenced the gene in limonium bicolor using CRISPR/Cas9 gene knockout technology (Feng et al, 2013). In the experiment, a gene knockout vector is constructed, and then the limonium bicolor is transformed to obtain the regenerated buds. Hygromycin was selected for screening positive regenerated shoots. And observing the development condition of the positive seedling salt gland after the leaf blade is mature.
The development of the salt glands of different strains was observed under DIC and fluorescence microscopy. The saline glands of the normal wild type limonium bicolor have autofluorescence, have four luminous points due to thickening of cell wall cuticle, and the shapes of the saline glands are more regular. When the LbRSG gene in Limonium bicolor is knocked out, the salt gland with three luminous points appears in the leaf blade at the moment, and the diameter of the salt gland is reduced integrally at the moment, which indicates that the number of cells forming the salt gland is reduced at the moment. The above results indicate that the LbRSG gene positively regulates the development of Limonium bicolor salt gland.
In situ hybridization according to the invention shows that LbRSG is localized to the saline glands, subcellular localization to the cytoplasmic membrane, and histochemical staining of the promoter shows a possible association with ion transport.
According to the three-generation full-length transcription group information, the full length 669bp of mRNA of LbRSG is obtained by cloning, 222 amino acids are coded, high expression is shown in the salt gland development period, and onion subcellular cells show that the LbRSG is positioned on a cytoplasmic membrane. Bioinformatics analysis shows that the gene encodes a hydrophilic protein, a double-transmembrane domain exists, the outer part of the membrane occupies 64 percent (141 amino acids) to form 1 large extracellular loop, the continuous negatively charged domain possibly participates in ion response, and the C end in the membrane has phosphorylation sites of threonine and serine, possibly leads to enzyme-linked reaction in cells through phosphorylation. The gene is directly positioned on the salt gland through in situ hybridization, and the strong correlation with the development of the salt gland is suggested.
The LbRSG preplanning 3030bp promoter sequence is obtained by a chromosome walking technology, and has the functions of responding abscisic acid, gibberellin, auxin elements (ABRE, GARE-motif and AAAC-motif), low-temperature, drought and light action elements (LTR, MBS, G-Box) and the like besides necessary cis-acting elements (TATA-Box and CAAT-Box). After the gene-specific promoter is constructed and connected with a GUS vector, arabidopsis thaliana is transformed, and LbRSG is mainly positioned in a conduction tissue, such as veins, rootstock joints and root hairs, and the possibility that the gene is related to the absorption and response of ions is suggested.
In situ hybridization shows that LbRSG can be directly related to the development of salt glands, and the function of LbRSG genes is further verified by adopting knockout and overexpression technologies. An LbRSG knockout carrier is constructed by using a CRISPR/Cas9 gene editing technology, lbRSG silent mutant LbRSG is obtained through a Limonium bicolor genetic transformation system, and the development condition of the LbRSG salt gland is determined by adopting a method that the salt gland has blue autofluorescence under ultraviolet excitation light. Compared with wild four-light-point salt gland, the LbRSG silent line LbRSG has a large number of three-light-point salt glands, which indicates that the knockout of LbRSG effectively causes salt gland dysplasia. Through the phenotype observation of LbRSG gene knockout strains, it is determined that LbRSG plays a positive regulation role in the salt gland development process.
Although the invention has been described in detail with respect to the general description and the specific embodiments thereof, it will be apparent to those skilled in the art that modifications and improvements can be made based on the invention. Accordingly, such modifications and improvements are intended to be within the scope of the invention as claimed.
Sequence listing
<110> university of Shandong Master
<120> Limonium bicolor gene LbRSG and application thereof
<130> PI202110023
<160> 2
<170> SIPOSequenceListing 1.0
<210> 1
<211> 222
<212> PRT
<213> Limonium bicolor (Limonium bicolor)
<400> 1
Met Ala Ser Arg Gln Ser Pro Leu Leu Ile His Arg Leu Phe Phe Val
1 5 10 15
Asn Ser Leu Leu Ala Pro Ala Ile His Leu Val Leu Ile Leu Ser Leu
20 25 30
Phe Ala Arg His Ser Thr Ala Asn Tyr Ile Gln Gly Gln Ala Thr Gly
35 40 45
Leu Arg His Asn Arg Ala Leu Leu Gly Phe Lys Glu Thr Pro Ser Gly
50 55 60
Gly Asn Thr Thr Phe Glu Cys Ser Pro Ser Gly Pro Cys Ile Ala Cys
65 70 75 80
Gln Tyr Ser Glu Lys Asn Glu Glu Lys Tyr Arg Cys Ser Glu Thr Gly
85 90 95
Tyr Arg Ile Pro Leu Lys Cys Val Lys Ile Val Asn Val Ala Asn Glu
100 105 110
Glu Asn Asp Glu Lys Glu Glu Thr Arg Ser Thr Leu Glu Val Leu Asn
115 120 125
Ser Glu Ser His Thr Asp Ser Gly Leu Arg Gly Ser Glu Asn Val Lys
130 135 140
His Arg Thr Leu Ala Glu Ser Lys Thr Asn Lys Ala Gly Glu Ser Glu
145 150 155 160
Val Tyr Val Thr Tyr Arg Ser Cys Ile Pro Ala Val Asn Glu Glu Lys
165 170 175
Ile Ser Val Val Gly Phe Glu Val Phe Thr Leu Ala Leu Leu Leu Ala
180 185 190
Ser Gly Ser Phe Val Phe Leu Arg Arg Arg Arg Thr Ser Val Ala Ser
195 200 205
Thr Ala Gly Gly Gly Ile Arg Met Gln Thr Asn Pro Arg Phe
210 215 220
<210> 2
<211> 3030
<212> DNA
<213> Limonium bicolor (Limonium bicolor)
<400> 2
aatgcaagga cctgaaggcg agcacacaaa agtctaatct caaccatcat cactagctaa 60
ggttgaagtc ctgaccatat attttgacaa agtggcttcc aacttgtctc caatcaacga 120
tatccacgcc taaatagaga taaataaata gtgtaaccaa caaggtcact tcaaaacaat 180
aacaagggat tgatcgacac acaaagatag agaaagttgt tagatgctta gtaactatct 240
gtttttggat aaagaaaatc aaaacctggt ctgccgaatt gaaccctcga atggtgttac 300
ctcctacaat ggcaatccct ctgttcccca gaggctgaga tatcactgcc tgccgaaatc 360
cacgttgcta gatcaagcag agcaatagac atataggagc agatgctaaa cagcatgatc 420
agcagtattt acctgtgtat ttgcaggaag aaaaggcagc tctgatctcg cagggtaaag 480
agaaaggttt gcaaaatagg tttctacaga cacaacattg aacaaacaac taaattaacg 540
tgaactgaag caattactcg ctgcttaaat gatcaagaca atttaacctc agcgccggac 600
acgagtttaa ctaaagctta cgtgccccag atttcataag cccttgatac aacgtgcctc 660
gaatcagttt tgcagaatct acggtcacag cttcaccacc tcctttgagt gattcagctg 720
ctgttcctat ctgaaacaca caatcgccat cataaacaac gaccaaagac ttgcaacaag 780
tagccgtcga caaagattcc caaaacctgg aaacaaagaa gtacgaattg aaactacttg 840
atccggacgg aatgtgtatg gatatgaatg gtttaagtta caaagtaaga cgtttcatca 900
taccatttca actcagaaac aacatggtca ggaaggtatg gagacattct ttcacactcg 960
acaccttctg gatccaccta acataaaaga aaaaagagcg atcaaaggaa ttcacattca 1020
cactattaga cacagccaga caaagataat tgagggaaaa cagttctaac cttagatatg 1080
gatttcggtc taattgaaac ccatacaaga ccagttagga tacacgaaac tgataaacca 1140
agagctaaca aatccgccct ggattgcgaa ctactcacaa aagatcaact tagatcgtac 1200
gagttgcatg aggcacagac ttgccacatt catagacact agttgttcag aaagataaac 1260
atgaaatttc gtcgacgccg cggtgatctc aattctcaaa ttgaggtgtt attctcatga 1320
tagagatcgc aaagaacgag tgaaggatag aagataaaat cttttacctt ccggcatcgg 1380
cgacgggtgc aatgccggaa accgcgcgat taaagagaac cgcgagcagg gaaaatccgc 1440
caatgtaaat tggtagactt cgaacgacat cgtcgttttc agaaacccaa tccgcaactg 1500
aattcctttt aggcttcggc cctgtatatg cacctcctga atttccctaa gggagagcaa 1560
aattcttaca gaaaggttga agtacatgta aaggcgagca gtttgaaaag gagaagctat 1620
aagtgcgacc tggaagtttc gaggggacga tttagccgtt atgtgacgtc gaaaggtaag 1680
agggtggaga tggagaggaa gggcgctagt atgtttggag cagagatttc gggggaaaaa 1740
atcgccattg cagttaggct gtactgtttg atgccgaagt gtgattgccg tttccatatc 1800
gttacgaagg tctcaattcg ttccccagat tttgtaggca attaacaact agggatgagg 1860
gatttggatt tatccaaatt aactgaaatt tatttttgga tttttaactg atttttaaaa 1920
ctgaatttaa aattttggtt attcgaatat ccaaattata attcggtttg gatttcggtg 1980
ttaaccctat aaaattcggt taaccgaatc atccaaactt ttttttaaag aaaatctcta 2040
aatctttcct taatggttaa tactctttaa acatgacaaa cagaacgtca aaattcataa 2100
ccctatctcg cattgctcca atgcttcaat tatataatgt catactattc ttttttcgtc 2160
aaattaatta tatataactg gcttttttgg aacattgttc atcgctgctc acccctcgtt 2220
tgatgtaact agtcaaatgt ttgagtgagt tctttctctt tctgttgtga tgaattggca 2280
actagggaat tcacaatttt cttgcagctt atggttatta ctgctgctga tcatgaacgt 2340
gaaacaaaaa aaagtgtttg tttttttttt tagttcggtt aactaaaatc cgattttaaa 2400
aatgggtttt tggttttttt tttaaatttc agttaattga aatccgaacc aaagcaaatt 2460
ttggatttca attcggtttt cagttttcaa ctgaaaaaag tttcagattt tggataattt 2520
ggatttcggt taattcagtt ttaatcaaag tttagttaat tcggtttttt aaccaaatta 2580
accaaaatcc aatttttttt tacaatttag attttggtta atcaaattat ccaaatgcta 2640
acctctgtaa caaccgtgag caaaagaaaa ctacccgcag attatgcaat tggattaacc 2700
gaaaaataac ctatggttgg gcctatagtt gggctggata caatagccca ataattagct 2760
aacaaccaaa gttgtcttaa tagtttgtcc ttccgtccct ctctcctcgg ccttaatgcc 2820
tccggttagc gtaactcgga tcggaacccc aaaaatttcg ttggttcgcc cgattattgt 2880
cgtgagattc tgtcttcttt gatcggacat cgacaattct gcatcttccc gacggtgaag 2940
gtggagtaag ccttgcaagt cgaaatacta gcagaactga ttgtgagctc tggtcgactg 3000
tagtatcaga ggacataacc agccattgga 3030
Claims (11)
1. Limonium bicolor gene LbRSG is characterized in that the LbRSG codes protein consisting of an amino acid sequence shown in SEQ ID NO. 1.
2. The Limonium bicolor LbRSG gene promoter is characterized in that the sequence is shown in SEQ ID NO. 2.
3. A biomaterial containing the gene LbRSG according to claim 1 or the promoter according to claim 2, wherein the biomaterial is a recombinant DNA, an expression cassette, a transposon, a plasmid vector, a viral vector or an engineered bacterium.
4. Use of the promoter according to claim 2 for regulating expression of a downstream gene, wherein the downstream gene comprises the gene LbRSG, reporter genes GUS and GFP according to claim 1.
5. Use of the gene LbRSG according to claim 1, the promoter according to claim 2 or the biological material according to claim 3 for the preparation of transgenic plants.
6. The use of the gene LbRSG or the biomaterial containing the gene LbRSG according to claim 1 in:
used for regulating and controlling the growth and development of salt glands of salt secreting halophytes;
wherein the regulation is positive regulation, and the plant is Limonium bicolor.
7. A method for reducing the diameter of limonium bicolor salt gland, reducing the number of salt gland cells and abnormal salt gland development is characterized in that a gene engineering means is utilized to knock out a limonium bicolor gene LbRSG to obtain a gene-knocked-out plant, and the limonium bicolor gene LbRSG is defined in claim 1.
8. The method of claim 7, wherein the genetic engineering means is selected from site-directed mutagenesis or homologous recombination.
9. The method of claim 7, wherein a CRISPR/Cas 9-based sgRNA sequence is designed for a target gene LbRSG in Limonium bicolor, a DNA fragment containing the sequence encoding the sgRNA is connected to a vector carrying the CRISPR/Cas to transform the Limonium bicolor, and a transgenic plant with the gene function being deleted is obtained;
the nucleotide sequence of the sgRNA action site is 5.
10. A method for increasing the number of limonium bicolor salt gland cells, wherein the method is selected from the group consisting of 1) or 2):
1) Allowing limonium bicolor to express a protein encoded by the gene LbRSG according to claim 1;
2) Overexpresses the gene LbRSG according to claim 1 in limonium bicolor;
the mode of overexpression is selected from the following 1) to 4), or an optional combination:
1) By introducing a plasmid having the gene;
2) By increasing the copy number of the gene on the chromosome of Limonium bicolor;
3) By operably linking a strong promoter to the gene;
4) By introducing an enhancer.
11. Use of a transgenic plant obtained according to the method of claim 10 in plant breeding.
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