CN111533761B - Ratio type pH probe with organelle or protein targeting function and application thereof - Google Patents

Ratio type pH probe with organelle or protein targeting function and application thereof Download PDF

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CN111533761B
CN111533761B CN202010445549.7A CN202010445549A CN111533761B CN 111533761 B CN111533761 B CN 111533761B CN 202010445549 A CN202010445549 A CN 202010445549A CN 111533761 B CN111533761 B CN 111533761B
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肖义
闫宇
张新富
陈令成
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Dalian University of Technology
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Abstract

A ratio type pH probe with organelle or protein targeting function and application thereof belong to the field of fine chemical engineering. In the field of biological imaging, the visual study of cell activities is of great significance. The ratio pH probe positioned in an organelle mainly realizes organelle targeting by connecting specific Tag, for example, morpholine is introduced to realize positioning of a lysosome, triphenylphosphine is introduced to realize mitochondrial targeting, and Hoechst is used for realizing DNA targeting. And a series of problems of increased synthesis steps, increased separation difficulty and the like exist by directly introducing a Tag site on the basis of a ratio pH probe, so that the development of a general platform is very important. The BODIPY and rhodamine molar extinction coefficient and fluorescence quantum yield are high, the spectrum is narrow, the spectrum matching and other advantages are very suitable for constructing a ratio pH probe of a FRET mechanism, and the compounds have high biocompatibility, can be specifically combined with the ratio pH and have the organelle targeting function.

Description

Ratio type pH probe with organelle or protein targeting function and application thereof
Technical Field
The invention relates to a ratio type pH probe with a cell organelle or protein targeting function and application thereof, belonging to the field of fine chemical engineering.
Background
Organelles play different roles in maintaining normal physiological activities of cells, however, the normal exertion of physiological functions needs to be carried out within a certain pH range, abnormal pH often causes a series of physiological diseases, for example, lysosome pH is about 4-6, which is a necessary condition for ensuring various enzyme activities and plays a crucial role in degrading intracellular aged organelles and various substances, and once abnormal pH is reached, the activity of hydrolytic enzyme is reduced or even inactivated, the corresponding physiological functions are destroyed.
In the biological field, the visualization research of the pH of organelles is of great significance for the activity of cells. The traditional ratiometric pH probes achieve organelle targeting by additionally introducing corresponding Tag groups, which increases the synthetic difficulty. In order to reduce the synthesis difficulty and improve the performance of the probe, the synthesis of a functional organelle targeting dye with high biocompatibility has important research value.
Disclosure of Invention
In order to search a fluorescent dye with excellent organelle targeting property, realize the visualization of organelles and research the influence of the pH of the organelles on the physiological activities of cells, the invention provides a ratio type pH probe with an organelle or protein targeting function and application thereof.
The technical scheme adopted by the invention is as follows: a kind of ratio type pH probe with organelle or protein targeting function, the probe has the following structural general formula:
Figure GDA0003158938190000011
in the general formula (I), the compound is shown in the specification,
Figure GDA0003158938190000012
Y2
Figure GDA0003158938190000021
Figure GDA0003158938190000022
wherein:
Figure GDA0003158938190000023
Figure GDA0003158938190000024
n1n is an integer of 0 to 1120 to 5, m1N is an integer of 0 to 1130 to 11, m2N is an integer of 0 to 114Is an integer of 0 to 5, n 50 to 5, m3Is an integer of 0 to 11, Y1、Y2And Y3N in the structure1、n2、n3、n4、m1、m2And m3May be of different values.
R1
Figure GDA0003158938190000025
Figure GDA0003158938190000026
Wherein: n is an integer of 0 to 18, m is an integer of 0 to 18, X-Is an anion, the anion being BF4 -、Cl-、Br-、I-、NO3 -、SO4 2-、ClO4 -、CH3COO-、CH3SO3 -Or CF3SO3 -. The above-mentioned
Figure GDA0003158938190000027
The total number of positive charges equals the total number of negative charges of the anion, R1And R2May be different groups.
R3,R4,R7,R8,R9And
Figure GDA00031589381900000210
or
Figure GDA00031589381900000211
R3,R4,R7,R8,R9And R10May be different groups.
R5,
Figure GDA0003158938190000028
Or a six-membered ring structure consisting of N atoms on the same side and carbon atoms on a benzene ring, wherein:
n60-18, R5And R6May be different groups.
Figure GDA0003158938190000029
Figure GDA0003158938190000031
The probe is obtained by carrying out three-step Click reaction on azido on trimesic nitrogen, BODIPY with alkynyl, rhodamine and Tag, and the preparation method comprises the following steps:
Figure GDA0003158938190000032
wherein: y is1、Y2、Y3And Tag is as defined in the general structural formula.
The application of a type of ratiometric pH probe with organelle or protein targeting function, which can locate organelle or target protein and is used for pH ratio test in organelle or target protein microenvironment.
The application of a ratio pH dye compound with an organelle targeting function can target a corresponding organelle so as to monitor the activity of the pH of the corresponding organelle in a living cell.
The invention has the beneficial effects that: the probe is subjected to three-step Click reaction with BODIPY, rhodamine and Tag with alkynyl through a symbenzene triazo platform to obtain ratiometric pH dye compounds with different connection modes and different chain lengths and the organelle targeting function. The compound has excellent organelle positioning performance and protein targeting performance, solves the problems of positioning to corresponding organelles and targeting target protein, provides more selectable tools for imaging biological organelles, has targeting function and can detect the pH value of a cell microenvironment. The compound is synthesized based on rhodamine, BODIPY and Tag, and can be used for cell microscopic imaging. The probe not only has higher fluorescence quantum yield, but also has the characteristic of easy functional modification. In addition, the probe has longer excitation wavelength and less damage to cells in the imaging process.
Drawings
FIG. 1 is a pH titration fluorescence plot of compound TBSR 4.
FIG. 2 is an image of the co-localization of compound TBSR4 and mitochondrial red in the mitochondria of Hela cells.
Detailed Description
The invention is illustrated but not limited by the following examples in which all parts and percentages are by weight unless otherwise indicated.
The following detailed description of the embodiments of the present invention is provided in conjunction with the technical solutions:
example 1
Figure GDA0003158938190000041
A first Click reaction to synthesize a compound TB 1: copper sulfate pentahydrate (515mg, 2.14mmol), sodium ascorbate (566mg, 2.86mmol), compound T (695mg, 2.86mmol) and compound B1(460mg, 1.43mmol) were dissolved in 10mL of N, N-dimethylformamide under argon, reacted at room temperature for 2h and TLC was used to determine the end point. The reaction mixture was diluted with 100mL of dichloromethane, washed with 30mL of saturated brine 3 times, the organic phase was dried over anhydrous sodium sulfate, filtered with suction, and the solvent was removed by distillation under the reduced pressure, and the crude product was purified by silica gel column chromatography to give Compound TB1(412mg, 51%). The product structure was identified by HRMS [ M ]: 565.2069.
second Click reaction, synthesisCompound TB1R 1: under the protection of argon, copper sulfate pentahydrate (141mg, 587.51. mu. mol), sodium ascorbate (233mg, 1.18mmol), TB1(332mg, 587.51. mu. mol) and R1(270mg, 587.51. mu. mol) were dissolved in 10mL of N, N-dimethylformamide, reacted at room temperature for 12h, and TLC was performed to determine the end point. The reaction mixture was diluted with 100mL of dichloromethane, washed with 30mL of saturated brine for 3 times, dried over anhydrous sodium sulfate for the organic phase, filtered under suction, and the solvent was removed by distillation under reduced pressure, and the crude product was purified by silica gel column chromatography to give TB1R1(290mg, 48%). The product structure is identified by HRMS (high resolution Mass Spectrometry) [ M + H ]]+:1025.3771。
And thirdly, Click reaction to synthesize a compound TBSR 1. Under the protection of argon, copper sulfate pentahydrate (2.42mg, 12.20. mu. mol), sodium ascorbate (5.87mg, 24, 39. mu. mol), TB1R1(25mg, 24, 39. mu. mol) and Tag1(13.54mg, 29.27. mu. mol) were dissolved in 10mL of N, N-dimethylformamide, reacted at room temperature for 12h, and TLC was used to determine the end point. The reaction mixture was diluted with 100mL of dichloromethane, washed with 30mL of saturated brine 3 times, dried over anhydrous sodium sulfate, filtered under suction, the solvent was removed by distillation under the reduced pressure, and the residue was purified by silica gel column chromatography to give compound TBSR1(15mg, 42%). The product structure is identified by HRMS (high resolution Mass Spectrometry) [ M + H ]]+:1487.5927。
Example 2
Figure GDA0003158938190000061
Synthesis method referring to example 1, the compound Tag2 was used in place of Tag1, and the product structure was identified by HRMS, HRMS [ M + H ]]+:1287.5095。
Example 3
Figure GDA0003158938190000062
Synthesis method referring to example 1, the compound Tag3 was used in place of Tag1, and the product structure was identified by HRMS, HRMS [ M + H ]]+:1328.4534。
Example 4
Figure GDA0003158938190000071
A first Click reaction to synthesize a compound TB 1: copper sulfate pentahydrate (515mg, 2.14mmol), sodium ascorbate (566mg, 2.86mmol), compound T (695mg, 2.86mmol) and compound B1(460mg, 1.43mmol) were dissolved in 10mL of N, N-dimethylformamide under argon, reacted at room temperature for 2h and TLC was used to determine the end point. The reaction mixture was diluted with 100mL of dichloromethane, washed with 30mL of saturated brine 3 times, the organic phase was dried over anhydrous sodium sulfate, filtered with suction, and the solvent was removed by distillation under the reduced pressure, and the crude product was purified by silica gel column chromatography to give Compound TB1(412mg, 51%). The product structure was identified by HRMS [ M ]: 565.2069.
in the second Click reaction, compound TB1R1 was synthesized: under the protection of argon, copper sulfate pentahydrate (141mg, 587.51. mu. mol), sodium ascorbate (233mg, 1.18mmol), TB1(332mg, 587.51. mu. mol) and R1(270mg, 587.51. mu. mol) were dissolved in 10mL of N, N-dimethylformamide, reacted at room temperature for 12h, and TLC was performed to determine the end point. The reaction mixture was diluted with 100mL of dichloromethane, washed with 30mL of saturated brine for 3 times, dried over anhydrous sodium sulfate for the organic phase, filtered under suction, and the solvent was removed by distillation under reduced pressure, and the crude product was purified by silica gel column chromatography to give TB1R1(290mg, 48%). The product structure is identified by HRMS (high resolution Mass Spectrometry) [ M + H ]]+:1025.3771。
And thirdly, Click reaction to synthesize a compound TBSR 4. Under the protection of argon, copper sulfate pentahydrate (2.42mg, 12.20. mu. mol), sodium ascorbate (5.87mg, 24, 39. mu. mol), TB1R1(25mg, 24, 39. mu. mol) and Tag4(8.87mg, 29.27. mu. mol) were dissolved in 10mL of N, N-dimethylformamide, reacted at room temperature for 12h, and TLC was used to determine the end point. The reaction mixture was diluted with 100mL of dichloromethane, washed with 30mL of saturated brine 3 times, dried over anhydrous sodium sulfate, filtered under suction, the solvent was removed by distillation under the reduced pressure, and the residue was purified by silica gel column chromatography to give compound TBSR4(18mg, 50%). The product structure is identified by HRMS, HRMS [ M ]]+:1411.5195。
Example 5
Figure GDA0003158938190000081
A first Click reaction to synthesize a compound TB 1: copper sulfate pentahydrate (515mg, 2.14mmol), sodium ascorbate (566mg, 2.86mmol), compound T (695mg, 2.86mmol) and compound B2(540mg, 1.43mmol) were dissolved in 10mL of N, N-dimethylformamide under argon, reacted at room temperature for 2h and TLC was used to determine the end point. The reaction mixture was diluted with 100mL of dichloromethane, washed with 30mL of saturated brine 3 times, the organic phase was dried over anhydrous sodium sulfate, filtered with suction, and the solvent was removed by distillation under the reduced pressure, and the crude product was purified by silica gel column chromatography to give Compound TB2(435mg, 49%). The product structure was identified by HRMS [ M ]: 565.2069.
in the second Click reaction, compound TB2R2 was synthesized: under the protection of argon, copper sulfate pentahydrate (141mg, 587.51. mu. mol), sodium ascorbate (233mg, 1.18mmol), TB2(364mg, 587.51. mu. mol) and R2(250mg, 587.51. mu. mol) were dissolved in 10mL of N, N-dimethylformamide, reacted at room temperature for 12h, and TLC was performed to determine the end point. The reaction mixture was diluted with 100mL of dichloromethane, washed with 30mL of saturated brine for 3 times, dried over anhydrous sodium sulfate for the organic phase, filtered under suction, and the solvent was removed by distillation under reduced pressure, and the crude product was purified by silica gel column chromatography to give TB2R2(306mg, 50%). The product structure is identified by HRMS (high resolution Mass Spectrometry) [ M + H ]]+:1025.3771。
And thirdly, Click reaction to synthesize a compound TBSR 5. Under the protection of argon, copper sulfate pentahydrate (2.42mg, 12.20. mu. mol), sodium ascorbate (5.87mg, 24, 39. mu. mol), TB2R2(25mg, 24.39. mu. mol) and Tag5(5.36mg, 29.27. mu. mol) were dissolved in 10mL of N, N-dimethylformamide, reacted at room temperature for 12h, and TLC was used to determine the end point. The reaction mixture was diluted with 100mL of dichloromethane, washed with 30mL of saturated brine 3 times, dried over anhydrous sodium sulfate, filtered under suction, the solvent was removed by distillation under the reduced pressure, and the residue was purified by silica gel column chromatography to give compound TBSR5(14mg, 49%). The product structure is identified by HRMS (high resolution Mass Spectrometry) [ M + H ]]+:1228.5975。
Example 6
Figure GDA0003158938190000091
Synthesis method referring to example 5, B3 is used to replace B2, R3 is used to replace R2, and Tag6 is used to replace Tag5, and the product structure is identified by HRMS, HRMS [ M + H ]]+:1269.6968。
Example 7
Figure GDA0003158938190000101
Synthesis method referring to example 1, B4 is used to replace B2, R4 is used to replace R2, and Tag7 is used to replace Tag5, and the product structure is identified by HRMS, HRMS [ M + H ]]+:1388.6149。
Example 8
Figure GDA0003158938190000102
Synthesis method referring to example 1, B4 is used to replace B2, R5 is used to replace R2, and Tag8 is used to replace Tag5, and the product structure is identified by HRMS, HRMS [ M + H ]]+:1324.6087。
Example 9
Figure GDA0003158938190000111
Synthesis method referring to example 1, B5 is used to replace B2, R6 is used to replace R2, and Tag9 is used to replace Tag5, and the product structure is identified by HRMS, HRMS [ M]+:1521.6290。
Example 10
The compound TBSR4 corresponding to example 4 was subjected to a ratiometric pH titration spectroscopy experiment. Compound TBSR4 was prepared as a 5mmol/L DMSO stock solution, a 5mmol/L TBSR4 solution was diluted with PBS to a 5. mu. mol/L test solution, and 5. mu. mol/L test solution of compound TBSR4 was irradiated with 480nm excitation light to obtain fluorescence spectrum data.
FIG. 1 is a pH titration fluorescence curve diagram of compound TBSR4, wherein a is the fluorescence spectrum of TBSR4 (5. mu. mol/L) at different pH values, b is the fluorescence intensity I of compound TBSR4 at 480nm excitation at different pH values588/I522In contrast, the ratio of fluorescence of compound TBSR4 was shown to be sensitive to pH.
Example 11
The compound TBSR4 corresponding to example 4 was subjected to cell co-localization experiments.
FIG. 2 probes TBSR-CHO (5. mu. mol/L) and Mito-tracker deep red (1. mu. mol/L)
FIG. 2 is an image of co-localization of compound TBSR4 and mitochondrial red in the mitochondria of Hela cells, wherein a is an image of the cell of compound TBSR4 channel, b is an image of the cell of mitochondrial red dye channel, and c is an image of bright field cells, and it can be seen that compound TBSR4 can localize in the mitochondria of the cells.

Claims (3)

1. A ratiometric pH probe having organelle or protein targeting functions, comprising the structure:
Figure 519450DEST_PATH_IMAGE002
2. the method for preparing a ratiometric pH probe with an organelle or protein targeting function according to claim 1, wherein the probe TBSR4 is prepared as follows:
Figure 452771DEST_PATH_IMAGE004
the preparation method of the probe TBSR9 is as follows:
Figure 980704DEST_PATH_IMAGE006
3. the use of a class of ratiometric pH probes having organelle or protein targeting functions according to claim 1, wherein the class of probes is capable of localizing organelles or targeted proteins and indicating the pH value of the microenvironment inside the organelle or targeted protein by fluorescence ratio, said use not being useful for the diagnosis and treatment of diseases.
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