CN109706156B - Application of RNA interference vector FveDDM1-RNAi for promoting early flowering of strawberry - Google Patents

Application of RNA interference vector FveDDM1-RNAi for promoting early flowering of strawberry Download PDF

Info

Publication number
CN109706156B
CN109706156B CN201910162508.4A CN201910162508A CN109706156B CN 109706156 B CN109706156 B CN 109706156B CN 201910162508 A CN201910162508 A CN 201910162508A CN 109706156 B CN109706156 B CN 109706156B
Authority
CN
China
Prior art keywords
fveddm1
strawberry
leu
forest
gene
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
CN201910162508.4A
Other languages
Chinese (zh)
Other versions
CN109706156A (en
Inventor
顾婷婷
肖琼
潘勤伟
李义
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Nanjing Agricultural University
Original Assignee
Nanjing Agricultural University
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Nanjing Agricultural University filed Critical Nanjing Agricultural University
Priority to CN201910162508.4A priority Critical patent/CN109706156B/en
Publication of CN109706156A publication Critical patent/CN109706156A/en
Application granted granted Critical
Publication of CN109706156B publication Critical patent/CN109706156B/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Images

Landscapes

  • Breeding Of Plants And Reproduction By Means Of Culturing (AREA)

Abstract

The invention belongs to the technical field of plant genetic engineering, and particularly designs a gene and a vector for advancing flowering time of strawberries and application thereof. Screening forest strawberry FveDDM1 genes from forest strawberries, constructing a plant suppression expression vector GN2300-FveDDM1 of the forest strawberry FveDDM1 genes, further transfecting transgenic engineering bacteria, and transferring the transgenic engineering bacteria into diploid forest strawberries 'Ruegen' to obtain RNAi expression interference strains of the FveDDM1 genes. Under the condition of tissue culture of the in vitro leaves, the flowering time of the strawberry of the FveDDM1 gene suppression expression system is obviously earlier than that of the wild type, which indicates that the flowering time of strawberry plants can be advanced by reducing the FveDDM1 gene of the forest strawberries, and the flowering time of a forest strawberry transgenic line of a genetic transformation FveDDM1 interference vector is obviously earlier. The method has important significance for advancing the flowering time of the strawberries.

Description

Application of RNA interference vector FveDDM1-RNAi for promoting early flowering of strawberry
Technical Field
The invention belongs to the technical field of genetic engineering, relates to a regulation and control method of strawberry flowering phase, and particularly relates to application of an RNA interference vector FveDDM1-RNAi for promoting early flowering of strawberries.
Background
Strawberry is a perennial rose plant and has a high economic value in the world. Therefore, understanding the developmental regulation mechanism of strawberry can promote the development of strawberry breeding and production. Forest strawberries (Fragaria viscosa l.,2n =2x = 14), also called wild strawberries, are perennial herbaceous plants of the rosaceous genus, rosaceous, belonging to diploid, short and small plants, growing in half-horizontal clusters. The diploid forest strawberry (Fragaria viscosa) has the closest relationship with the cultivated strawberry, has the advantages of small genome (240 Mbp), short regeneration period (about 4 months), small plant and the like, and is an ideal model plant suitable for genetic transformation.
Flowering is an important life transformation process for plants, a major transformation from vegetative to reproductive growth. The transition from vegetative to reproductive growth of strawberries is a series of stages beginning with flower induction. Flowering is controlled by environmental conditions and developmental regulation, the complexity of which is caused by a complex network of signalling pathways. The growth and development of the plants can be regulated and controlled by regulating the flowering time of the plants, so that the yield is influenced. The yield of plants can be increased if the plants can be adjusted to the most suitable flowering stage by means of techniques.
DNA methylation (DNA methylation) is one of the hot spots in epigenetic studies at present. DNA methylation refers to the process of transferring 1 methyl group on a donor S-adenosylmethionine to the 5 th carbon atom of cytosine by the action of DNA methyltransferase using DNA as an acceptor, thereby forming 5-methylcytosine (m 5C). The level of DNA methylation is not constant and is regulated by both DNA methylation and DNA demethylation. Cytosine methylation of DNA occurs in CG, CHG and CHH (H = a, C or T) sequences in plants and is a hallmark of epigenetic suppression of repetitive sequences. The chromatin remodeling factor DREREASE IN DNA METHYLATION1 (DDM 1) is a member of the SWI2/SNF2 protein family and is critical for DNA METHYLATION, particularly IN the CG and CHG sequences. DNA methylation is an important epigenetic marker, and the low or high methylation level can affect the growth, development and differentiation of plants, and cause abnormal development and morphology.
At present, the regulation and control of the flowering period of the strawberries mainly focus on the aspects of improvement of cultivation measures, hormone treatment, low-temperature and short-day treatment and the like, and reports about the regulation and control of plant flowering by DDM1 are newly found.
Disclosure of Invention
The invention obtains the RNAi transgenic material of the FveDDM1 by constructing a gene silencing vector of DNA demethylation and using an agrobacterium transformation method. The flowering time is proved to be earlier than that of the wild type, and the correlation between the FveDDM1 gene and strawberry flowering is verified.
The technical scheme of the invention is as follows:
the first purpose of the invention is to provide application of a forest strawberry FVEDDM1 gene in advancing flowering time of strawberries, wherein the nucleotide sequence of the forest strawberry FVEDDM1 gene is shown as SEQ ID NO. 2.
Furthermore, the expression of the forest strawberry FVEDDM1 gene is inhibited, so that the flowering time of the strawberries can be advanced.
Furthermore, an RNAi vector aiming at the forest strawberry FveDDM1 gene is introduced into the forest strawberry, so that the expression of the forest strawberry FveDDM1 gene is inhibited, and the flowering time of the strawberry can be advanced.
The second purpose of the invention is to provide a method for constructing an RNAi vector of a forest strawberry FVEDDM1 gene, which comprises the following steps:
s1: designing specific primer by taking forest strawberry cDNA sequence as template
FveDDM1-RNAi-F1:5’-ACTctgcaggTCGACTTGGCCCGAACTTCC-3’(SEQ ID NO.4),
FveDDM1-RNAi-R1:5 'AATAATATATGGTCGAcGAcGAAGAAAAGGGACG-3' (SEQ ID NO. 5), and the forward sequence (SEQ ID NO. 8) of the RNA interference fragment of the forest strawberry FveDDM1 gene is obtained through amplification, and the length is 392bp:
TTGGCCCGAACTTCCCAATAATTGTTACTTCATATGAAGTGGCGTTGGCTGATGCAAGAAGATGTTTAAGACACTACAACTGGAAATATCTCGTGGTTGATGAAGGACACAGATTGAAAAACTCCAAGTGCAAACTAGTGCAGCAGTTGAAGTACATACCTGTAGAGAATAAGATTCTGTTGACTGGAACACCTCTCCAGAATAATTTGGCTGAGCTTTGGTCGTTGTTGAACTTTATTTTGCCGGATATATTCTCATCCCATGAAGAATTTGAGTCGTGGTTTGACCTAGAAGGAAAGTGCCATAATGAAGCAATGAAGGAAGAATTAGAAGAGAAGAGAAGAGCTCAAGTGCTACCGAAACTCCATGCAATATTGCGTCCCTTTCTTCTC;
designing a specific primer of FveDDM1-RNAi-F2: 5-:
GAGAAGAAAGGGACGCAATATTGCATGGAGTTTCGGTAGCACTTGAGCTCTTCTCTTCTCTTCTAATTCTTCCTTCATTGCTTCATTATGGCACTTTCCTTCTAGGTCAAACCACGACTCAAATTCTTCATGGGATGAGAATATATCCGGCAAAATAAAGTTCAACAACGACCAAAGCTCAGCCAAATTATTCTGGAGAGGTGTTCCAGTCAACAGAATCTTATTCTCTACAGGTATGTACTTCAACTGCTGCACTAGTTTGCACTTGGAGTTTTTCAATCTGTGTCCTTCATCAACCACGAGATATTTCCAGTTGTAGTGTCTTAAACATCTTCTTGCATCAGCCAACGCCACTTCATATGAAGTAACAATTATTGGGAAGTTCGGGCCAA。
s2: connecting the forward sequence of RNA interference fragment of forest strawberry FveDDM1 gene to GN2300 universal vector through Sal I enzyme cutting site; the reverse sequence of the forest strawberry FveDDM1 gene RNA interference fragment is connected to a GN2300 universal vector through an XbaI enzyme cutting site;
s3: and transforming the obtained recombinant vector into an escherichia coli competent cell DH5 alpha, extracting positive plasmids, carrying out electrophoresis detection and sequencing verification to obtain an RNAi vector GN2300-FVEDDM1 of the forest strawberry FVEDDM1 gene containing a forest strawberry FVEDDM1 gene RNA interference fragment forward sequence-forest strawberry FVEDDM1 gene RNA interference fragment reverse sequence.
The third purpose of the invention is to provide an RNAi vector of the forest strawberry FveDDM1 gene constructed by the method.
The fourth purpose of the invention is to provide the application of the RNAi vector of the forest strawberry FVEDDM1 gene in advancing the flowering time of the strawberries.
The fifth purpose of the invention is to provide a transgenic engineering bacterium transfected with the RNAi vector of the forest strawberry FveDDM1 gene.
The sixth purpose of the invention is to provide the application of the transgenic engineering bacteria of the RNAi vector transfected with the forest strawberry FVEDDM1 gene in advancing the flowering time of the strawberries.
The invention has the beneficial effects that
(1) According to the invention, the strawberry plant with early flowering time can be obtained by down-regulating the expression of the FVe DDM1 gene, so that a new idea is provided for regulating and controlling the flowering time of the strawberry.
(2) The invention advances the flowering time of the strawberries by a transgenic mode and overcomes the defect of low efficiency in the commonly used method for regulating and controlling the flowering time at present. Through a genetic transformation mode, a more efficient method is provided for regulating and controlling the flowering phase of the strawberries.
(3) The invention transfers the FVe DDM1-RNAi vector into the strawberry, successfully obtains the plant with earlier flowering time, realizes the aim of obtaining early flowering by using an RNA interference technology, and provides reference for RNA interference plant molecular breeding.
Drawings
FIG. 1 is a comparison of flowering (left) of the fifth Ruegen (right) of the 2/3 line of 1- (2) after the GN2300-FveDDM1-RNAi vector transferred into the forest strawberry FveDDM1 gene with the wild type Ruegen;
FIG. 2 shows the comparison of the flowering (left) of the sixth Ruegen (right) of line 1- (2) and 2/3 after the GN2300-FveDDM1-RNAi vector transferred into the forest strawberry FveDDM1 gene with the wild type Ruegen;
FIG. 3 is a comparison of flowering (left) of the seventh Ruegen (right) of 2/3 line 1- (2) after the GN2300-FveDDM1-RNAi vector transferred into the forest strawberry FveDDM1 gene with the wild type Ruegen;
FIG. 4 shows comparison of flowering (left) of the first Ruegen of the 2/3 line 1- (2) after the GN2300-FveDDM1-RNAi vector transferred into the forest strawberry FveDDM1 gene with that of the wild type Ruegen.
Detailed Description
EXAMPLE 1 cloning of the FveDDM1 Gene
According to the full-length CDS (shown in SEQ ID NO. 1) of Arabidopsis thaliana DDM1 gene published by Tair (https:// www.arabidopsis.org /), a strawberry gene library is downloaded on a GDR webpage (ftp:// ftp. Bioinfo.wsu.edu/species/Fragaria _ visco/Fvesca-gene.v 2.0.a2/genes /), the CDS of the FVEDDM1 corresponding to forest strawberry is locally aligned by using Bioedit software, and similarly, a protein sequence is aligned (the CDS is 2178bp in length, and is shown in SEQ ID NO.2, and the amino acid sequence encoded by the FVEDDM1 gene is shown in SEQ ID NO. 3)
Extracting total RNA of wild forest strawberry, reversely transcribing the total RNA into cDNA, acquiring the CDS of the forest strawberry from a GDR website (the download website address is ftp:// ftp. Bioinfo. Wsu. Edu/species/Fragaria _ visco/Fvesca-gene. V2.0.a2/genes /) and carrying out PCR amplification on the FveDDM1 gene by taking the cDNA of the wild forest strawberry as a template, and inserting a forward fragment. Primers SEQ ID NO.4 and SEQ ID NO.5 are designed by Snapgene software to amplify a gene forward target fragment, and a PCR reaction system is shown in Table 1.
Table 1:
Figure BDA0001985134180000041
the primer sequences are as follows:
FveDDM1-RNAi-F1:5’-ACTctgcaggTCGACTTGGCCCGAACTTCC-3’(SEQ ID NO.4),
FveDDM1-RNAi-R1:5’-AATAATATGGTCGAcGAGAAGAAAGGGACG-3’(SEQ ID NO.5)
the PCR program was set to: pre-denaturation at 94 ℃ for 2min, denaturation at 98 ℃ for 10s, annealing at 55 ℃ for 30s, extension temperature for 68 ℃, extension time calculated according to the length of the amplified fragment (1 kb/min), extension time for 25s, set for 33 cycles, and finally extension at 68 ℃ for 10min.
Amplifying to obtain a forward sequence of the RNA interference fragment of the forest strawberry FveDDM1 gene shown as SEQ ID NO.8, wherein the length of the forward sequence is 392bp:
and (3) carrying out PCR amplification on the FveDDM1 gene by taking cDNA of wild forest strawberries as a template, and inserting a reverse fragment. The PCR reaction system was the same as in Table 1. Snap gene software is used to design primers SEQ ID NO.6 and SEQ ID NO.7 for amplification of the gene reverse target fragment.
The primer sequences are as follows:
FveDDM1-RNAi-F2:5’-TTGCAAAGCTctagaGAGAAGAAAGGGACG-3’(SEQ ID NO.6),
FveDDM1-RNAi-R2:5’-TGAACGATCtctagATTGGCCCGAACTTCC-3’(SEQ ID NO.7)
the PCR procedure was the same as when the gene was amplified forward to the desired fragment.
Amplifying to obtain a reverse sequence of the forest strawberry FveDDM1 gene RNA interference fragment shown as SEQ ID NO.9, wherein the length is 392bp:
example 2 construction of GN2300-FveDDM1-RNAi vector
1. Ligation of Forward fragments
Using One Step Cloning Kit (Vazyme) recombinant Cloning Kit, sal I was selected as an enzyme cleavage site on GN2300-35S-FAQ-NOS vector, the Cloning vector was linearized with restriction enzymes, placed in a 37 ℃ water bath, and reacted for 4 hours. The reaction system is shown in table 2:
table 2:
Figure BDA0001985134180000051
after enzyme digestion, the mixture is inactivated at 65 ℃ for 20 minutes and used for recombination reaction.
The reaction system was formulated in an ice-water bath as shown in table 3:
table 3:
Figure BDA0001985134180000061
the mixed reaction solution is prepared and then placed in a water bath kettle at 37 ℃ for water bath for 30min. Cooling the reaction solution on ice for 5min;
2. ligation of reverse fragments
XbaI is selected as an enzyme cutting site on a GN2300-35S-FAQ-NOS vector connected with a forward segment, and a reverse segment is connected.
3. Conversion reaction
(1) Taking out Escherichia coli competent cell DH5 alpha from a refrigerator at-80 ℃, adding 10 mu L of reaction liquid obtained in the step 2 after forward and reverse connection when the Escherichia coli competence is frozen and thawed, and placing on ice for 30min;
(2) Putting into a constant temperature water bath kettle at 42 ℃ for 90s;
(3) Standing in ice water for 2min;
(4) Adding 700 μ L LB liquid medium without any antibiotic on a clean bench, and shaking the Escherichia coli on a shaker at 37 deg.C at 200rpm for 1h;
(5) 4,000 revolutions per minute, and centrifuging for 1min;
(6) The supernatant was discarded in an ultraclean bench, leaving about 100. Mu.l, the pellet was resuspended, aspirated with a pipette tip, blotted onto LB solid medium containing 50mg/L kanamycin, spread evenly with a cooled sterilized spreading stick, sealed with a sealing film, and the name written. Culturing the culture medium in an inverted state at 37 deg.C overnight for 12-16 hr;
(7) After the colony is formed, picking a single colony, putting the single colony into an LB liquid culture medium containing Kana, and carrying out colony PCR verification. And (3) selecting clone strains which are possibly positive after electrophoresis detection, sending the clone strains to a company for sequencing, and comparing the gene sequences of the clone strains to be completely correct to obtain the GN2300-FVEDDM1-RNAi vector of the forest strawberry FVEDDM1 gene, which contains the forward sequence of the forest strawberry FVEDDM1 gene RNA interference fragment-the forest strawberry FVEDDM1 gene RNA interference fragment reverse sequence.
(8) Extracting recombinant plasmid of Escherichia coli, transforming into GV3101 Agrobacterium strain, preserving the strain with 50% glycerol, and preserving in-80 deg.C refrigerator.
Example 3 transformation of strawberries for functional validation
1. Preparation of explants
The explants were selected from young leaves of forest strawberry ecotype Ruegen.
Seeds of Ruegen fruits were peeled off with tweezers, placed on filter paper, and after air-drying, approximately 200 filled seeds were picked and placed in a 5ml centrifuge tube.
The following operations are performed on an ultra-clean bench: add about 2 ml of 75% alcohol to the centrifuge tube, shake and invert for about 5 minutes and aspirate all alcohol. Sterile water was added to the centrifuge tube and washed 3-5 times to remove excess alcohol. Then 2 ml of 10% sodium hypochlorite (sodium hypochlorite needs to be kept away from light) is added, and the sodium hypochlorite is sucked out after shaking for 8 minutes. Sterile water is added into the centrifuge tube, and the centrifuge tube is washed for 5-7 times to remove sodium hypochlorite and avoid residues. After the washing, the seeds are poured on sterile filter paper, 4-5 seeds are placed in each tissue culture bottle filled with MS solid culture medium by using sterile cooled tweezers, the bottle cover is marked, the tissue culture bottles are placed in a dark constant-temperature incubator at 28 ℃, and after germination, the tissue culture bottles are placed in the light for culture. The explant selects tender leaves with the leaf age of about 15-20 days, consistent growth vigor and plump.
2. Transformation by infection with Agrobacterium
(1) Activating strains: 100 mu L of GV3101 Agrobacterium tumefaciens strain containing GN2300-FveDDM1-RNAi vector of forest strawberry FveDDM1 gene is taken out from a refrigerator at minus 80 ℃, streaked on an LB solid culture medium plate, inversely cultured in a thermostat at 28 ℃ for 1-2 days, after the single bacterium grows out, the picked single bacterium colony is placed in an LB liquid culture medium added with 50mg/L kanamycin and 100mg/L rifampicin, cultured in a constant temperature shaker at 28 ℃ for 1-2 days at 200rpm, and the color of the bacterium liquid is slightly shaken to light yellow. 100-150. Mu.L of the shake-down bacteria solution was aspirated, and 50mg/L kanamycin and 100mg/L rifampicin in LB liquid medium were added thereto, and shaken overnight at 200rpm on a constant temperature shaker at 28 ℃ and 200rpm. Centrifuging the shaken bacterial solution at 4500rpm at room temperature for 5min, discarding the filtrate, collecting the bacterial mass, resuspending with sterilized MS suspension (prepared by adding Acetosyringone (AS) to 100 μ M in MS suspension), and determining OD 600 Value, OD 600 After adjusting to about 0.48, the bacterial solution was suspended for 1h on a constant temperature shaker at 28 ℃ and 100 rpm.
(2) Infecting the leaves: and (3) cutting off tender leaves with consistent leaf age of about 15-20 days from the tissue culture bottle in the gap time of bacterial liquid suspension, scratching the back of strawberry leaves by using a blade, putting the leaves into MS bacterial liquid suspension after all the leaves are cut, putting the MS bacterial liquid suspension into a shaking table at 28 ℃, and infecting for 20 minutes at 100 rpm. After infection, the bacterial liquid is poured out, the residual bacterial liquid on the leaves is absorbed by sterile filter paper, transferred to a co-culture medium and co-cultured for 3 days in a dark environment. After the explants are degermed for 15 days under the weak light, the explants growing the calluses are moved to a screening culture medium and are moved to the light for culture, the temperature is set to be 22 ℃, and the culture medium is replaced every 2 weeks.
(3) When the adventitious bud is produced, the adventitious bud is cut into several small segments and transferred to a germination medium. Transferring the leaves into a rooting culture medium after the leaves grow out, and transferring the seedlings into a flowerpot after the seedlings are recovered when the leaves grow into complete seedlings.
The following media were used in the experiments (pH 5.8 unless otherwise specified):
(1) 1/2MS solid medium: sucrose 20g/L, 1/2MS culture medium powder 4.302g/L, agar 7g/L,
(2) LB solid medium: 10g/L Tryptone (Tryptone), 5g/L Yeast Extract (Yeast Extract), 10g/L sodium chloride, 10g/L agar powder, and pH 7.0
(3) LB liquid medium: tryptone (Tryptone) 10g/L, yeast Extract (Yeast Extract) 5g/L, sodium chloride 10g/L, pH 7.0
(4) MS solid culture medium: MS culture medium powder (containing vitamins) 4.406g/L, sucrose 30g/L, and agar powder 7g/L
(5) MS-B5 solid medium: 4.302g/L MS culture medium powder (containing no vitamin), 20g/L sucrose, 5mL/L B5 organic solution and 7g/L agar powder
(6) Strawberry co-culture medium: MS-B5 medium +2mg/L TDZ +0.2mg/L IBA +20mg/L AS
(7) Strawberry sterilization medium: MS-B5 medium +2mg/LTDZ +0.2mg/L IBA +300mg/L Ti
(8) Strawberry screening culture medium: MS-B5 culture medium +3 mg/L6-BA +0.2mg/L IBA +300mg/L Ti +20mg/L Kan
(9) Strawberry germination medium: MS-B5 culture medium +2 mg/L6-BA +0.2mg/L IBA +300mg/L Ti +20mg/L Kan
Red strawberry rooting medium: MS-B5 medium +0.2mg/L IBA +300mg/L Ti
The formulation of the hormones used in the experiments was as follows:
(1) TDZ (2 mg/mL): weighing 20mg of TDZ powder, dissolving with 200 μ L of 1M sodium hydroxide solution, adding pure alcohol after complete dissolution, metering to 10ml, and storing at-20 deg.C for use.
(2) IBA (1 mg/mL): weighing 10mg IBA powder, diluting to 10mL with sterile distilled water, and storing at-20 deg.C for use.
(3) AS (20 mg/mL): weighing 20mg AS powder, adding DMSO to a constant volume of 1mL, and storing at-20 deg.C for use.
(4) Ti (300 mg/mL): weighing 3g of Ti, using distilled water to fix the volume to 10mL, and storing at-20 ℃ for later use.
(5) Kan (100 mg/mL): weighing Kan 500mg, adding distilled water to a constant volume of 5mL, and storing at-20 ℃ for later use.
(6) MS-B5 organic solution: weighing nicotinic acid 0.2g, inositol 20g, vitamin B1 g, vitamin B6.2 g, dissolving with distilled water to constant volume of 1L, and storing in refrigerator at 4 deg.C for use.
(7) Weighing 6.0g of sodium hydroxide sheet-shaped object in 1M sodium hydroxide solution, dissolving with distilled water, fixing the volume to 150mL, and storing at room temperature.
3. GUS staining verification of transgenic plants
Preparing GUS dye solution, cutting off leaves of transgenic strawberry plants, and dyeing the leaves. If the staining is successful, the GUS reporter gene is successfully expressed in the plant and is transferred into the strawberry genome.
4. Observing and analyzing transgenic plants
Phenotype Time of transplantation Number of flowers Counting time
Wild type strawberry 9/12/2018 0 11 and 22 months in 2018
Transgenic line 1 9/12/2018 4 11 months in 201822 days
Transgenic line 2 9/12/2018 2 11/2018 and 22/month
Transgenic line 3 9/12/2018 1 11/2018 and 22/month
Transgenic line 4 9/12/2018 1 11/2018 and 22/month
From the above results, it can be seen that the transgenic strawberry plants exhibited earlier flowering time than the wild type strawberry plants. Under the same culture condition, the wild strawberry plant does not flower after 71 days, and the transgenic strawberry transferred into the FveDDM1-RNAi vector flowers after 71 days of transplantation. According to the results, the RNAi vector aiming at the forest strawberry FveDDM1 gene is introduced into the forest strawberry, so that the expression of the forest strawberry FveDDM1 gene is inhibited, and the flowering time of the strawberry can be advanced. The FveDDM1-RNAi vector can promote early flowering of strawberries, and the FveDDM1-RNAi vector is a functional vector and can promote reproductive growth and early flowering of plants.
Sequence listing
<110> Nanjing university of agriculture
<120> application of RNA interference vector FveDDM1-RNAi for promoting early flowering of strawberry
<160> 9
<170> SIPOSequenceListing 1.0
<210> 1
<211> 2770
<212> DNA
<213> Arabidopsis thaliana (Arabidopsis thaliana)
<400> 1
aaaaaataag aaaataggcg taaatatgag agtgtgtttt ttcaatatac cctcggtttt 60
gaatttgctc tcaaaagcga cggagacgac tgtttggctc ggtgatttct cccgccgttt 120
gggtttttct taccggaatt tccttctcct tcgatggtta gtctgcgctc cagaaaagtt 180
attccggctt cggaaatggt cagcgacggg aaaacggaga aagatgcgtc tggtgattca 240
cccacttctg ttctcaacga agaggaaaac tgtgaggaga aaagtgttac tgttgtagag 300
gaagagatac ttctagccaa aaatggagat tcttctctta tttctgaagc catggctcag 360
gaggaagagc agctgctcaa acttcgggaa gatgaagaga aagctaacaa tgctggatct 420
gctgttgctc ctaatctgaa tgaaactcag tttactaaac ttgatgagct cttgacgcaa 480
actcagctct actctgagtt tctccttgag aaaatggagg atatcacaat taatgggata 540
gaaagtgaga gccaaaaagc tgagcccgag aagactggtc gtggacgcaa aagaaaggct 600
gcttctcagt acaacaatac taaggctaag agagcggttg ctgctatgat ttcaagatct 660
aaagaagatg gtgagaccat caactcagat ctgacagagg aagaaacagt catcaaactg 720
cagaatgaac tttgtcctct tctcactggt ggacagttaa agtcttatca gcttaaaggt 780
gtcaaatggc taatatcatt gtggcagaat ggtttgaatg gaatattagc tgatcaaatg 840
ggacttggaa agacgattca aacgatcggt ttcttatcac atctgaaagg gaatgggttg 900
gatggtccat atctagtcat tgctccactg tctacacttt caaattggtt caatgagatt 960
gctaggttca cgccttccat caatgcaatc atctaccatg gggataaaaa tcaaagggat 1020
gagctcagga ggaagcacat gcctaaaact gttggtccca agttccctat agttattact 1080
tcttatgagg ttgccatgaa tgatgctaaa agaattctgc ggcactatcc atggaaatat 1140
gttgtgattg atgagggcca caggttgaaa aaccacaagt gtaaattgtt gagggaacta 1200
aaacacttga agatggataa caaacttctg ctgacaggaa cacctctgca aaataatctt 1260
tctgagcttt ggtctttgtt aaattttatt ctgcctgaca tctttacatc acatgatgaa 1320
tttgaatcat ggtttgattt ttctgaaaag aacaaaaacg aagcaaccaa ggaagaagaa 1380
gagaaaagaa gagctcaagt tgtttccaaa cttcatggta tactacgacc attcatcctt 1440
cgaagaatga aatgtgatgt tgagctctca cttccacgga aaaaggagat tataatgtat 1500
gctacaatga ctgatcatca gaaaaagttc caggaacatc tggtgaataa cacgttggaa 1560
gcacatcttg gagagaatgc catccgaggt caaggctgga agggaaagct taacaacctg 1620
gtcattcaac ttcgaaagaa ctgcaaccat cctgaccttc tccaggggca aatagatggt 1680
tcatatctct accctcctgt tgaagagatt gttggacagt gtggtaaatt ccgcttattg 1740
gagagattac ttgttcggtt atttgccaat aatcacaaag tccttatctt ctcccaatgg 1800
acgaaacttt tggacattat ggattactac ttcagtgaga aggggtttga ggtttgcaga 1860
atcgatggca gtgtgaagct ggatgaaagg agaagacaga ttaaagattt cagtgatgag 1920
aagagcagct gtagtatatt tctcctgagt accagagctg gaggactcgg aatcaatctt 1980
actgctgctg atacatgcat cctctatgac agcgactgga accctcaaat ggacttgcaa 2040
gccatggaca gatgccacag aatcgggcag acgaaacctg ttcatgttta taggctttcc 2100
acggctcagt cgatagagac ccgggttctg aaacgagcgt acagtaagct caagctggaa 2160
catgtggtta ttggccaagg gcagtttcat caagaacgtg ccaagtcttc aacaccttta 2220
gaggaagagg acatactggc gttgcttaag gaagatgaaa ctgctgaaga taagttgata 2280
caaaccgata taagcgatgc ggatcttgac aggttacttg accggagtga cctgacaatt 2340
actgcaccgg gagagacaca agctgctgaa gcttttccag tgaagggtcc aggttgggaa 2400
gtggtcctgc ctagttcggg aggaatgctg tcttccctga acagttagga cacattaata 2460
agccaggcct tgaaaccact tctgtgtttt tttttttttt ttccggaaca tgatcggtta 2520
cttttggctg ggaggattta attattagag ggctcggaag tttttgtaag ttaaagaact 2580
cacttaaaac cctgaaaaca tgacagttaa tggtgattag ctctcaatgt gatgaaaaca 2640
attggccctc tgattttgct gttgcggtaa tattatgact tgtgtacgtt tatagtcttt 2700
gtagtctgca attttggcat tgagctattt ctcacgaact tatgggatct tatgttttgg 2760
atttgggatt 2770
<210> 2
<211> 2178
<212> DNA
<213> forest strawberry (Fragaria visco)
<400> 2
atggcgacga agaccgagcc ggcggcggat tctcccactt cggttctcga ggaagaggat 60
ttgtgtgggg agattgatgt gaaattggtg aaggcggagg aggagctgct cgaggttcgg 120
gttaaggaag aggagacaga aagggagaag gagacacccg tcttgagtga gactcagttc 180
agcaagttgg atgagcttct cactaagact cagcttttta cagacttttt gctcgagaaa 240
atggatgaca tctcttttga tgttcccgag caactgaatg aacctgaacc tgtgcagaaa 300
aagagaggcc gcggtacgaa aagaaaggct cctacttaca ataatactaa ggccaagagg 360
gcagttgcgg ctatgcttac aagatctaaa gagggtgaga aaattgaaga tgtgaaccta 420
actgaggagg aaagacttga gaaacagcaa aaggaacttg tacctctact gactggtggc 480
aaattgaagt cttatcaact caaaggtgta aagtggttga tctctttatg gcaaaatggg 540
ctcaatggga tccttgcaga ccaaatggga cttggcaaga ctatccagac cataggtttt 600
ctttctcatc taaaatctat gggattggat gggccctact tggtgattgc tcctctttct 660
actctttcca actggattaa tgaaatctca aggtttacgc cttcaattaa ggctataatc 720
tatcatggta acaagaaaga aagggatgag ataataagga agcacatgcc caaatcagtt 780
ggcccgaact tcccaataat tgttacttca tatgaagtgg cgttggctga tgcaagaaga 840
tgtttaagac actacaactg gaaatatctc gtggttgatg aaggacacag attgaaaaac 900
tccaagtgca aactagtgca gcagttgaag tacatacctg tagagaataa gattctgttg 960
actggaacac ctctccagaa taatttggct gagctttggt cgttgttgaa ctttattttg 1020
ccggatatat tctcatccca tgaagaattt gagtcgtggt ttgacctaga aggaaagtgc 1080
cataatgaag caatgaagga agaattagaa gagaagagaa gagctcaagt gctaccgaaa 1140
ctccatgcaa tattgcgtcc ctttcttctc cgaagaatga agatagatgt tgagctgatg 1200
cttccaagaa agaaggaaat catactatat gcaaccatga cagagcatca aaagaagttt 1260
caggaacatc tgatcaataa gacactggag aaacatctaa tacttgaaaa gggaagccat 1320
gtaaatggcc tgaaagggaa gctgaacaat ttgatgatcc aacttcggaa gaactgcaat 1380
catcctgacc ttctagagtc ggcatttgat ggatcatatt tctacccgcc tgttgaccag 1440
atagttgagc aatgtgggaa atttagcttg cttgaaagac tgttgaagct gctgcttgcc 1500
ggcaaacata aggttctgat attctcgcag tggaccaaga ttttggatat aatggattac 1560
tattttagcg aaaaaggata tgaagtttgt agaattgatg gccatgtgaa actggatgat 1620
cggagaagac agattgcttc gttcaatgat ttagacagca cttgtagaat attcctactg 1680
agcacaagag ccggtggact aggtatcaac cttactgcag ctgatacctg tatactgtat 1740
gacagtgatt ggaaccctca aatggatttg caagccatgg atagatgtca caggattggg 1800
caaaccaagc ctgttcatgt ttaccggttg gcaacagcac aatctgtaga gggtcggatg 1860
ttaaaaagag cttttagcaa gttgaagctt gaacatgtag ttattggaaa agggaagttc 1920
catcaggaaa gagccaagcc tgaggcagat ttcttggagg aagaggatct catagcactt 1980
ctccgagatg aagaatctgc tgaagacaag atgatacaga cagatatcac tgatgaagag 2040
ctggagaaag tcttggatcg cagtgatctc attgggactc ctcctgatgc tgctgatgcg 2100
cttcccctga agggacctgg ctgggaagtg gtggttccta ccgctagtgg gggcatgctc 2160
tcctccctta atagttag 2178
<210> 3
<211> 725
<212> PRT
<213> forest strawberry (Fragaria visco)
<400> 3
Met Ala Thr Lys Thr Glu Pro Ala Ala Asp Ser Pro Thr Ser Val Leu
1 5 10 15
Glu Glu Glu Asp Leu Cys Gly Glu Ile Asp Val Lys Leu Val Lys Ala
20 25 30
Glu Glu Glu Leu Leu Glu Val Arg Val Lys Glu Glu Glu Thr Glu Arg
35 40 45
Glu Lys Glu Thr Pro Val Leu Ser Glu Thr Gln Phe Ser Lys Leu Asp
50 55 60
Glu Leu Leu Thr Lys Thr Gln Leu Phe Thr Asp Phe Leu Leu Glu Lys
65 70 75 80
Met Asp Asp Ile Ser Phe Asp Val Pro Glu Gln Leu Asn Glu Pro Glu
85 90 95
Pro Val Gln Lys Lys Arg Gly Arg Gly Thr Lys Arg Lys Ala Pro Thr
100 105 110
Tyr Asn Asn Thr Lys Ala Lys Arg Ala Val Ala Ala Met Leu Thr Arg
115 120 125
Ser Lys Glu Gly Glu Lys Ile Glu Asp Val Asn Leu Thr Glu Glu Glu
130 135 140
Arg Leu Glu Lys Gln Gln Lys Glu Leu Val Pro Leu Leu Thr Gly Gly
145 150 155 160
Lys Leu Lys Ser Tyr Gln Leu Lys Gly Val Lys Trp Leu Ile Ser Leu
165 170 175
Trp Gln Asn Gly Leu Asn Gly Ile Leu Ala Asp Gln Met Gly Leu Gly
180 185 190
Lys Thr Ile Gln Thr Ile Gly Phe Leu Ser His Leu Lys Ser Met Gly
195 200 205
Leu Asp Gly Pro Tyr Leu Val Ile Ala Pro Leu Ser Thr Leu Ser Asn
210 215 220
Trp Ile Asn Glu Ile Ser Arg Phe Thr Pro Ser Ile Lys Ala Ile Ile
225 230 235 240
Tyr His Gly Asn Lys Lys Glu Arg Asp Glu Ile Ile Arg Lys His Met
245 250 255
Pro Lys Ser Val Gly Pro Asn Phe Pro Ile Ile Val Thr Ser Tyr Glu
260 265 270
Val Ala Leu Ala Asp Ala Arg Arg Cys Leu Arg His Tyr Asn Trp Lys
275 280 285
Tyr Leu Val Val Asp Glu Gly His Arg Leu Lys Asn Ser Lys Cys Lys
290 295 300
Leu Val Gln Gln Leu Lys Tyr Ile Pro Val Glu Asn Lys Ile Leu Leu
305 310 315 320
Thr Gly Thr Pro Leu Gln Asn Asn Leu Ala Glu Leu Trp Ser Leu Leu
325 330 335
Asn Phe Ile Leu Pro Asp Ile Phe Ser Ser His Glu Glu Phe Glu Ser
340 345 350
Trp Phe Asp Leu Glu Gly Lys Cys His Asn Glu Ala Met Lys Glu Glu
355 360 365
Leu Glu Glu Lys Arg Arg Ala Gln Val Leu Pro Lys Leu His Ala Ile
370 375 380
Leu Arg Pro Phe Leu Leu Arg Arg Met Lys Ile Asp Val Glu Leu Met
385 390 395 400
Leu Pro Arg Lys Lys Glu Ile Ile Leu Tyr Ala Thr Met Thr Glu His
405 410 415
Gln Lys Lys Phe Gln Glu His Leu Ile Asn Lys Thr Leu Glu Lys His
420 425 430
Leu Ile Leu Glu Lys Gly Ser His Val Asn Gly Leu Lys Gly Lys Leu
435 440 445
Asn Asn Leu Met Ile Gln Leu Arg Lys Asn Cys Asn His Pro Asp Leu
450 455 460
Leu Glu Ser Ala Phe Asp Gly Ser Tyr Phe Tyr Pro Pro Val Asp Gln
465 470 475 480
Ile Val Glu Gln Cys Gly Lys Phe Ser Leu Leu Glu Arg Leu Leu Lys
485 490 495
Leu Leu Leu Ala Gly Lys His Lys Val Leu Ile Phe Ser Gln Trp Thr
500 505 510
Lys Ile Leu Asp Ile Met Asp Tyr Tyr Phe Ser Glu Lys Gly Tyr Glu
515 520 525
Val Cys Arg Ile Asp Gly His Val Lys Leu Asp Asp Arg Arg Arg Gln
530 535 540
Ile Ala Ser Phe Asn Asp Leu Asp Ser Thr Cys Arg Ile Phe Leu Leu
545 550 555 560
Ser Thr Arg Ala Gly Gly Leu Gly Ile Asn Leu Thr Ala Ala Asp Thr
565 570 575
Cys Ile Leu Tyr Asp Ser Asp Trp Asn Pro Gln Met Asp Leu Gln Ala
580 585 590
Met Asp Arg Cys His Arg Ile Gly Gln Thr Lys Pro Val His Val Tyr
595 600 605
Arg Leu Ala Thr Ala Gln Ser Val Glu Gly Arg Met Leu Lys Arg Ala
610 615 620
Phe Ser Lys Leu Lys Leu Glu His Val Val Ile Gly Lys Gly Lys Phe
625 630 635 640
His Gln Glu Arg Ala Lys Pro Glu Ala Asp Phe Leu Glu Glu Glu Asp
645 650 655
Leu Ile Ala Leu Leu Arg Asp Glu Glu Ser Ala Glu Asp Lys Met Ile
660 665 670
Gln Thr Asp Ile Thr Asp Glu Glu Leu Glu Lys Val Leu Asp Arg Ser
675 680 685
Asp Leu Ile Gly Thr Pro Pro Asp Ala Ala Asp Ala Leu Pro Leu Lys
690 695 700
Gly Pro Gly Trp Glu Val Val Val Pro Thr Ala Ser Gly Gly Met Leu
705 710 715 720
Ser Ser Leu Asn Ser
725
<210> 4
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 4
actctgcagg tcgacttggc ccgaacttcc 30
<210> 5
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 5
aataatatgg tcgacgagaa gaaagggacg 30
<210> 6
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 6
ttgcaaagct ctagagagaa gaaagggacg 30
<210> 7
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 7
tgaacgatct ctagattggc ccgaacttcc 30
<210> 8
<211> 392
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 8
ttggcccgaa cttcccaata attgttactt catatgaagt ggcgttggct gatgcaagaa 60
gatgtttaag acactacaac tggaaatatc tcgtggttga tgaaggacac agattgaaaa 120
actccaagtg caaactagtg cagcagttga agtacatacc tgtagagaat aagattctgt 180
tgactggaac acctctccag aataatttgg ctgagctttg gtcgttgttg aactttattt 240
tgccggatat attctcatcc catgaagaat ttgagtcgtg gtttgaccta gaaggaaagt 300
gccataatga agcaatgaag gaagaattag aagagaagag aagagctcaa gtgctaccga 360
aactccatgc aatattgcgt ccctttcttc tc 392
<210> 9
<211> 392
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 9
gagaagaaag ggacgcaata ttgcatggag tttcggtagc acttgagctc ttctcttctc 60
ttctaattct tccttcattg cttcattatg gcactttcct tctaggtcaa accacgactc 120
aaattcttca tgggatgaga atatatccgg caaaataaag ttcaacaacg accaaagctc 180
agccaaatta ttctggagag gtgttccagt caacagaatc ttattctcta caggtatgta 240
cttcaactgc tgcactagtt tgcacttgga gtttttcaat ctgtgtcctt catcaaccac 300
gagatatttc cagttgtagt gtcttaaaca tcttcttgca tcagccaacg ccacttcata 360
tgaagtaaca attattggga agttcgggcc aa 392

Claims (2)

1. Forest-inhibiting strawberryFveDDM1Application of RNAi vector for gene expression in advancing flowering time of strawberries, and forest strawberriesFveDDM1The nucleotide sequence of the gene is shown in SEQ ID NO. 2.
2. Transformed forest-inhibiting strawberries as claimed in claim 1FveDDM1The transgenic engineering bacteria of the RNAi vector of the gene expression is applied to the early flowering time of the strawberry.
CN201910162508.4A 2019-03-05 2019-03-05 Application of RNA interference vector FveDDM1-RNAi for promoting early flowering of strawberry Active CN109706156B (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CN201910162508.4A CN109706156B (en) 2019-03-05 2019-03-05 Application of RNA interference vector FveDDM1-RNAi for promoting early flowering of strawberry

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN201910162508.4A CN109706156B (en) 2019-03-05 2019-03-05 Application of RNA interference vector FveDDM1-RNAi for promoting early flowering of strawberry

Publications (2)

Publication Number Publication Date
CN109706156A CN109706156A (en) 2019-05-03
CN109706156B true CN109706156B (en) 2022-10-14

Family

ID=66266259

Family Applications (1)

Application Number Title Priority Date Filing Date
CN201910162508.4A Active CN109706156B (en) 2019-03-05 2019-03-05 Application of RNA interference vector FveDDM1-RNAi for promoting early flowering of strawberry

Country Status (1)

Country Link
CN (1) CN109706156B (en)

Families Citing this family (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN111471707B (en) * 2020-03-23 2023-06-09 南京农业大学 Carrier for delaying forest strawberry leaf senescence and preparation method and application thereof
CN111471691B (en) * 2020-04-01 2023-05-05 南京农业大学 Application of FveCHA1 gene and RNAi vector in promoting strawberry callus formation and regeneration of in-vitro buds

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN107164391A (en) * 2017-06-30 2017-09-15 沈阳农业大学 A kind of strawberry floral genes FvbHLH78 and its application

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN107164391A (en) * 2017-06-30 2017-09-15 沈阳农业大学 A kind of strawberry floral genes FvbHLH78 and its application

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
DNA methylation and the promotion of flowering by vernalization;E. J. FINNEGAN et al.;《Proc. Natl. Acad. Sci. USA》;19980531;第95卷;摘要、表4、第5284页右栏最后一段 *
XM_004289096.2;无;《NCBI》;20150304;第1-2页 *
无.XM_004289096.2.《NCBI》.2015,第1-2页. *

Also Published As

Publication number Publication date
CN109706156A (en) 2019-05-03

Similar Documents

Publication Publication Date Title
CN107541520B (en) OsSAUR11 gene related to rice root development and stress resistance, coding protein and application
CN111440804A (en) Application of corn ZmBES1/BZR1-5 gene in cultivation of large-grain plants
CN109706156B (en) Application of RNA interference vector FveDDM1-RNAi for promoting early flowering of strawberry
CN110183526B (en) Protein OsPPR5 for controlling rice grain thickness and thousand grain weight and coding gene and application thereof
CN106754957B (en) OsSCAMP13 gene, encoding protein, application of stress resistance and acquisition method
CN112342236B (en) Application of rice histone methyltransferase in enhancing crop drought resistance and improving single plant yield
CN109295075B (en) NfOCP1 drought-resistant gene, amino acid sequence coded by same and application thereof in improving plant drought resistance
CN110106171B (en) Long-chain non-coding RNA and application thereof in regulating and controlling low temperature resistance of plants
CN113461794B (en) Kit and method for regulating seed germination and application thereof
CN111471691B (en) Application of FveCHA1 gene and RNAi vector in promoting strawberry callus formation and regeneration of in-vitro buds
CN116064568A (en) Alfalfa MsASG166 gene and application thereof in improving drought tolerance of plants
CN111961675B (en) Clonotus sinensis-free Clinopodium polycephalum closed flower gene CsCly and application thereof
CN110951771B (en) Chinese cymbidiummiR390aApplication in controlling plant root system development
CN111454966A (en) Cymbidium CgWRKY4 gene and application thereof
CN106755070B (en) Method for creating heat-resistant cabbage mustard germplasm
CN117051014B (en) Cloning and application of cold-resistant gene MYB97 of swallow flower
CN110904110B (en) Application of OsHAP3C gene expression reduction in rice variety with shortened heading period and prolonged growth period
CN112760326B (en) Gene of rice OsPPR035, and coding protein and application thereof
CN112779267B (en) Rice OsPPR406 gene and coding protein and application thereof
CN111607604B (en) Application of cotton GHPSAT2 gene in promoting flowering of plants
CN112725353B (en) Recombinant vector, transformant, primer for amplifying AtNAC58 gene and preparation method and application thereof
CN114231556B (en) Application of GmECT2 in regulating plant height
CN112662670B (en) Peanut fatty acyl-acyl carrier protein thioesterase AhFATB2 gene promoter, and preparation method and application thereof
CN109337917B (en) Nfdirp drought-resistant gene, coded amino acid sequence thereof and application thereof in improving plant drought resistance
CN106544347B (en) A method of regulation vegetable seeds dormancy time

Legal Events

Date Code Title Description
PB01 Publication
PB01 Publication
SE01 Entry into force of request for substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant