CA2295968A1 - Methode in vitro d'obtention de matrices pour le sequencage d'adn - Google Patents

Methode in vitro d'obtention de matrices pour le sequencage d'adn Download PDF

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Publication number
CA2295968A1
CA2295968A1 CA002295968A CA2295968A CA2295968A1 CA 2295968 A1 CA2295968 A1 CA 2295968A1 CA 002295968 A CA002295968 A CA 002295968A CA 2295968 A CA2295968 A CA 2295968A CA 2295968 A1 CA2295968 A1 CA 2295968A1
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CA
Canada
Prior art keywords
dna
reaction
vitro method
dna sequencing
transposon
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Granted
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CA002295968A
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English (en)
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CA2295968C (fr
Inventor
Tuomas Tenkanen
Timo Soininen
Harri Savilahti
Kirsi Multanen
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Thermo Fisher Scientific Oy
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Individual
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Publication of CA2295968A1 publication Critical patent/CA2295968A1/fr
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Publication of CA2295968C publication Critical patent/CA2295968C/fr
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Expired - Lifetime legal-status Critical Current

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CA002295968A 1997-07-14 1998-07-10 Methode in vitro d'obtention de matrices pour le sequencage d'adn Expired - Lifetime CA2295968C (fr)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
FI972992A FI103809B1 (fi) 1997-07-14 1997-07-14 In vitro -menetelmä templaattien tuottamiseksi DNA-sekventointia varten
FI972992 1997-07-14
PCT/FI1998/000586 WO1999004035A1 (fr) 1997-07-14 1998-07-10 Methode in vitro d'obtention de matrices pour le sequençage d'adn

Publications (2)

Publication Number Publication Date
CA2295968A1 true CA2295968A1 (fr) 1999-01-28
CA2295968C CA2295968C (fr) 2008-11-25

Family

ID=8549258

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002295968A Expired - Lifetime CA2295968C (fr) 1997-07-14 1998-07-10 Methode in vitro d'obtention de matrices pour le sequencage d'adn

Country Status (9)

Country Link
US (1) US6593113B1 (fr)
EP (1) EP1005571B1 (fr)
JP (1) JP2001510055A (fr)
AT (1) ATE382095T1 (fr)
AU (1) AU738345B2 (fr)
CA (1) CA2295968C (fr)
DE (1) DE69838911D1 (fr)
FI (1) FI103809B1 (fr)
WO (1) WO1999004035A1 (fr)

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US8383345B2 (en) 2008-09-12 2013-02-26 University Of Washington Sequence tag directed subassembly of short sequencing reads into long sequencing reads
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US9080211B2 (en) 2008-10-24 2015-07-14 Epicentre Technologies Corporation Transposon end compositions and methods for modifying nucleic acids
US9074251B2 (en) * 2011-02-10 2015-07-07 Illumina, Inc. Linking sequence reads using paired code tags
US8829171B2 (en) 2011-02-10 2014-09-09 Illumina, Inc. Linking sequence reads using paired code tags
CA2821299C (fr) * 2010-11-05 2019-02-12 Frank J. Steemers Liaison entre des lectures de sequences a l'aide de codes marqueurs apparies
CA2821559C (fr) 2011-01-28 2017-01-31 Illumina, Inc. Remplacement d'oligonucleotides pour bibliotheques marquees aux deux extremites et directionnelles
AU2012212148B8 (en) 2011-02-02 2017-07-06 University Of Washington Through Its Center For Commercialization Massively parallel contiguity mapping
US20130017978A1 (en) 2011-07-11 2013-01-17 Finnzymes Oy Methods and transposon nucleic acids for generating a dna library
US9145623B2 (en) 2011-07-20 2015-09-29 Thermo Fisher Scientific Oy Transposon nucleic acids comprising a calibration sequence for DNA sequencing
US10273541B2 (en) 2012-08-14 2019-04-30 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10752949B2 (en) 2012-08-14 2020-08-25 10X Genomics, Inc. Methods and systems for processing polynucleotides
BR112015003354A8 (pt) 2012-08-14 2018-01-16 10X Genomics Inc métodos e composições de microcápsula
US11591637B2 (en) 2012-08-14 2023-02-28 10X Genomics, Inc. Compositions and methods for sample processing
US10221442B2 (en) 2012-08-14 2019-03-05 10X Genomics, Inc. Compositions and methods for sample processing
US10323279B2 (en) 2012-08-14 2019-06-18 10X Genomics, Inc. Methods and systems for processing polynucleotides
US9701998B2 (en) 2012-12-14 2017-07-11 10X Genomics, Inc. Methods and systems for processing polynucleotides
US9951386B2 (en) 2014-06-26 2018-04-24 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10584381B2 (en) 2012-08-14 2020-03-10 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10533221B2 (en) 2012-12-14 2020-01-14 10X Genomics, Inc. Methods and systems for processing polynucleotides
WO2014093676A1 (fr) 2012-12-14 2014-06-19 10X Technologies, Inc. Procédés et systèmes pour le traitement de polynucléotides
US9683230B2 (en) 2013-01-09 2017-06-20 Illumina Cambridge Limited Sample preparation on a solid support
KR20230003659A (ko) 2013-02-08 2023-01-06 10엑스 제노믹스, 인크. 폴리뉴클레오티드 바코드 생성
EP3919617A1 (fr) 2013-03-13 2021-12-08 Illumina, Inc. Procédés et compositions de séquençage d'acide nucléique
SG11201508985VA (en) 2013-05-23 2015-12-30 Univ Leland Stanford Junior Transposition into native chromatin for personal epigenomics
CA2932283A1 (fr) 2013-12-20 2015-06-25 Illumina, Inc. Conservation des informations de connectivite genomique dans des echantillons d'adn genomiques fragmentes
CN106103713B (zh) 2014-02-03 2021-05-28 赛默飞世尔科技波罗的海封闭股份公司 用于经控制dna片段化的方法
US11136576B2 (en) 2014-02-03 2021-10-05 Thermo Fisher Scientific Baltics Uab Method for controlled DNA fragmentation
EP4219010A1 (fr) 2014-04-10 2023-08-02 10X Genomics, Inc. Procédés d'encapsulation et de partitionnement de réactifs
CN113249435A (zh) 2014-06-26 2021-08-13 10X基因组学有限公司 分析来自单个细胞或细胞群体的核酸的方法
IL299976B1 (en) 2014-10-17 2024-07-01 Illumina Cambridge Ltd Continuity-preserving transposition
KR20170073667A (ko) 2014-10-29 2017-06-28 10엑스 제노믹스, 인크. 표적화 핵산 서열 분석을 위한 방법 및 조성물
SG11201703472YA (en) * 2014-11-05 2017-05-30 Illumina Inc Transposase compositions for reduction of insertion bias
US9975122B2 (en) 2014-11-05 2018-05-22 10X Genomics, Inc. Instrument systems for integrated sample processing
KR102321863B1 (ko) 2015-01-12 2021-11-08 10엑스 제노믹스, 인크. 핵산 시퀀싱 라이브러리의 제조 방법 및 시스템 및 이를 이용하여 제조한 라이브러리
KR20170119710A (ko) 2015-02-24 2017-10-27 10엑스 제노믹스, 인크. 표적화된 핵산 서열 커버리지 방법
EP4286516A3 (fr) 2015-02-24 2024-03-06 10X Genomics, Inc. Procédés et systèmes de traitement de cloisonnement
US10344336B2 (en) 2015-06-09 2019-07-09 Life Technologies Corporation Methods, systems, compositions, kits, apparatus and computer-readable media for molecular tagging
SG11201804086VA (en) 2015-12-04 2018-06-28 10X Genomics Inc Methods and compositions for nucleic acid analysis
WO2017197338A1 (fr) 2016-05-13 2017-11-16 10X Genomics, Inc. Systèmes microfluidiques et procédés d'utilisation
US10550429B2 (en) 2016-12-22 2020-02-04 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10815525B2 (en) 2016-12-22 2020-10-27 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10011872B1 (en) 2016-12-22 2018-07-03 10X Genomics, Inc. Methods and systems for processing polynucleotides
WO2018129368A2 (fr) 2017-01-06 2018-07-12 Editas Medicine, Inc. Procédés d'évaluation de la coupure par les nucléases
EP4029939B1 (fr) 2017-01-30 2023-06-28 10X Genomics, Inc. Procédés et systèmes de codage à barres de cellules individuelles sur la base de gouttelettes
CN109526228B (zh) 2017-05-26 2022-11-25 10X基因组学有限公司 转座酶可接近性染色质的单细胞分析
US10844372B2 (en) 2017-05-26 2020-11-24 10X Genomics, Inc. Single cell analysis of transposase accessible chromatin
WO2019014564A1 (fr) 2017-07-14 2019-01-17 Editas Medicine, Inc. Systèmes et procédés d'intégration ciblée et d'édition du génome et détection de celle-ci à l'aide de sites d'amorçage intégrés
SG11201913654QA (en) 2017-11-15 2020-01-30 10X Genomics Inc Functionalized gel beads
US10829815B2 (en) 2017-11-17 2020-11-10 10X Genomics, Inc. Methods and systems for associating physical and genetic properties of biological particles
AU2019214935A1 (en) 2018-01-30 2020-08-20 Editas Medicine, Inc. Systems and methods for modulating chromosomal rearrangements
CN112262218A (zh) 2018-04-06 2021-01-22 10X基因组学有限公司 用于单细胞处理中的质量控制的***和方法
WO2023225095A1 (fr) 2022-05-18 2023-11-23 Illumina Cambridge Limited Préparation de fragments d'acide nucléique à taille contrôlée

Family Cites Families (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5677170A (en) * 1994-03-02 1997-10-14 The Johns Hopkins University In vitro transposition of artificial transposons

Also Published As

Publication number Publication date
AU738345B2 (en) 2001-09-13
FI972992A0 (fi) 1997-07-14
WO1999004035A1 (fr) 1999-01-28
FI103809B (fi) 1999-09-30
FI972992A (fi) 1999-01-15
EP1005571A1 (fr) 2000-06-07
EP1005571B1 (fr) 2007-12-26
AU8442998A (en) 1999-02-10
FI103809B1 (fi) 1999-09-30
DE69838911D1 (de) 2008-02-07
CA2295968C (fr) 2008-11-25
JP2001510055A (ja) 2001-07-31
US6593113B1 (en) 2003-07-15
ATE382095T1 (de) 2008-01-15

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